I: pbuilder: network access will be disabled during build
I: Current time: Sun Jan 26 20:12:27 -12 2025
I: pbuilder-time-stamp: 1737965547
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [ball_1.5.0+git20180813.37fc53c-11.dsc]
I: copying [./ball_1.5.0+git20180813.37fc53c.orig.tar.xz]
I: copying [./ball_1.5.0+git20180813.37fc53c-11.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./ball_1.5.0+git20180813.37fc53c-11.dsc: unsupported subcommand
dpkg-source: info: extracting ball in ball-1.5.0+git20180813.37fc53c
dpkg-source: info: unpacking ball_1.5.0+git20180813.37fc53c.orig.tar.xz
dpkg-source: info: unpacking ball_1.5.0+git20180813.37fc53c-11.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying python3.patch
dpkg-source: info: applying fix-ftbfs-char.patch
dpkg-source: info: applying missing_GLEW
dpkg-source: info: applying 2to3.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/4651/tmp/hooks/D02_print_environment starting
I: set
  BUILDDIR='/build/reproducible-path'
  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
  BUILDUSERNAME='pbuilder1'
  BUILD_ARCH='armhf'
  DEBIAN_FRONTEND='noninteractive'
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 '
  DISTRIBUTION='unstable'
  HOME='/root'
  HOST_ARCH='armhf'
  IFS=' 	
  '
  INVOCATION_ID='deea73829c654094984e0d1fc8f06090'
  LANG='C'
  LANGUAGE='en_US:en'
  LC_ALL='C'
  MAIL='/var/mail/root'
  OPTIND='1'
  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
  PBCURRENTCOMMANDLINEOPERATION='build'
  PBUILDER_OPERATION='build'
  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
  PBUILDER_SYSCONFDIR='/etc'
  PPID='4651'
  PS1='# '
  PS2='> '
  PS4='+ '
  PWD='/'
  SHELL='/bin/bash'
  SHLVL='2'
  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9bNwyRGI/pbuilderrc_f2Q1 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9bNwyRGI/b1 --logfile b1/build.log ball_1.5.0+git20180813.37fc53c-11.dsc'
  SUDO_GID='113'
  SUDO_UID='107'
  SUDO_USER='jenkins'
  TERM='unknown'
  TZ='/usr/share/zoneinfo/Etc/GMT+12'
  USER='root'
  _='/usr/bin/systemd-run'
  http_proxy='http://10.0.0.15:3142/'
I: uname -a
  Linux virt32c 6.1.0-30-armmp-lpae #1 SMP Debian 6.1.124-1 (2025-01-12) armv7l GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/4651/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: armhf
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-python, qtbase5-dev, libqt5opengl5-dev, python3-sip-dev, flex, bison, cmake, qtwebengine5-dev, qttools5-dev, libeigen3-dev, python3-dev, libboost-dev, libboost-iostreams-dev, libboost-thread-dev, libglew-dev, libx11-dev, tidy, chrpath, libtirpc-dev, doxygen, graphviz, ghostscript, texlive-latex-base, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19557 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on dh-python; however:
  Package dh-python is not installed.
 pbuilder-satisfydepends-dummy depends on qtbase5-dev; however:
  Package qtbase5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libqt5opengl5-dev; however:
  Package libqt5opengl5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-sip-dev; however:
  Package python3-sip-dev is not installed.
 pbuilder-satisfydepends-dummy depends on flex; however:
  Package flex is not installed.
 pbuilder-satisfydepends-dummy depends on bison; however:
  Package bison is not installed.
 pbuilder-satisfydepends-dummy depends on cmake; however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on qtwebengine5-dev; however:
  Package qtwebengine5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on qttools5-dev; however:
  Package qttools5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libeigen3-dev; however:
  Package libeigen3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-dev; however:
  Package python3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-dev; however:
  Package libboost-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however:
  Package libboost-iostreams-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-thread-dev; however:
  Package libboost-thread-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libglew-dev; however:
  Package libglew-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libx11-dev; however:
  Package libx11-dev is not installed.
 pbuilder-satisfydepends-dummy depends on tidy; however:
  Package tidy is not installed.
 pbuilder-satisfydepends-dummy depends on chrpath; however:
  Package chrpath is not installed.
 pbuilder-satisfydepends-dummy depends on libtirpc-dev; however:
  Package libtirpc-dev is not installed.
 pbuilder-satisfydepends-dummy depends on doxygen; however:
  Package doxygen is not installed.
 pbuilder-satisfydepends-dummy depends on graphviz; however:
  Package graphviz is not installed.
 pbuilder-satisfydepends-dummy depends on ghostscript; however:
  Package ghostscript is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-latex-base; however:
  Package texlive-latex-base is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however:
  Package texlive-latex-recommended is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however:
  Package texlive-fonts-recommended is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however:
  Package texlive-latex-extra is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} bison{a} bsdextrautils{a} chrpath{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} flex{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} graphviz{a} groff-base{a} icu-devtools{a} intltool-debian{a} libabsl20230802{a} libaom3{a} libapache-pom-java{a} libarchive-zip-perl{a} libarchive13t64{a} libasound2-data{a} libasound2t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavif16{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libcairo2{a} libcdt5{a} libcgraph6{a} libclang-cpp19{a} libclang1-19{a} libcom-err2{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2t64{a} libcurl4t64{a} libdatrie1{a} libdav1d7{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1t64{a} libevdev2{a} libevent-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfmt10{a} libfontbox-java{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgbm1{a} libgcrypt20{a} libgd3{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libgles-dev{a} libgles1{a} libgles2{a} libglew-dev{a} libglew2.2{a} libglib2.0-0t64{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgnutls30t64{a} libgpg-error0{a} libgraphite2-3{a} libgs-common{a} libgs10{a} libgs10-common{a} libgssapi-krb5-2{a} libgts-0.7-5t64{a} libgudev-1.0-0{a} libgvc6{a} libgvpr2{a} libharfbuzz-subset0{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu-dev{a} libicu72{a} libidn12{a} libidn2-0{a} libijs-0.35{a} libimagequant0{a} libinput-bin{a} libinput10{a} libjbig0{a} libjbig2dec0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} liblcms2-2{a} libldap2{a} liblerc4{a} libllvm19{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmd4c0{a} libminizip1t64{a} libmpfi0{a} libmtdev1t64{a} libnghttp2-14{a} libnspr4{a} libnss3{a} libopengl-dev{a} libopengl0{a} libopenjp2-7{a} libopus0{a} libp11-kit0{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libpathplan4{a} libpcre2-16-0{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libpsl5t64{a} libptexenc1{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqt5concurrent5t64{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5designer5{a} libqt5designercomponents5{a} libqt5gui5t64{a} libqt5help5{a} libqt5network5t64{a} libqt5opengl5-dev{a} libqt5opengl5t64{a} libqt5positioning5{a} libqt5positioning5-plugins{a} libqt5positioningquick5{a} libqt5printsupport5t64{a} libqt5qml5{a} libqt5qmlmodels5{a} libqt5qmlworkerscript5{a} libqt5quick5{a} libqt5quickparticles5{a} libqt5quickshapes5{a} libqt5quicktest5{a} libqt5quickwidgets5{a} libqt5serialport5{a} libqt5sql5-sqlite{a} libqt5sql5t64{a} libqt5test5t64{a} libqt5webchannel5{a} libqt5webchannel5-dev{a} libqt5webengine-data{a} libqt5webengine5{a} libqt5webenginecore5{a} libqt5webenginewidgets5{a} libqt5widgets5t64{a} libqt5xml5t64{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsnappy1v5{a} libssh2-1t64{a} libsvtav1enc2{a} libsynctex2{a} libtasn1-6{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libthai-data{a} libthai0{a} libtidy58{a} libtiff6{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libvpx9{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxcomposite1{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxi6{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxmu6{a} libxpm4{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxt6t64{a} libxtst6{a} libxxf86vm1{a} libyuv0{a} libz3-4{a} libzzip-0-13t64{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} netbase{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} poppler-data{a} preview-latex-style{a} procps{a} python3{a} python3-autocommand{a} python3-dev{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-sip{a} python3-sip-dev{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} qdoc-qt5{a} qhelpgenerator-qt5{a} qt5-assistant{a} qt5-qmake{a} qt5-qmake-bin{a} qt5-qmltooling-plugins{a} qtattributionsscanner-qt5{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} qtdeclarative5-dev{a} qtdeclarative5-dev-tools{a} qtpositioning5-dev{a} qttools5-dev{a} qttools5-dev-tools{a} qtwebengine5-dev{a} readline-common{a} sensible-utils{a} shared-mime-info{a} sip-dev{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} tidy{a} tzdata{a} ucf{a} x11-common{a} x11proto-dev{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  alsa-topology-conf alsa-ucm-conf ca-certificates curl dbus default-jre dvisvgm fonts-droid-fallback fonts-liberation geoclue-2.0 javascript-common krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libfl-dev libglib2.0-data libgpg-error-l10n libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libqt5svg5 libsasl2-modules libspreadsheet-parseexcel-perl libx11-protocol-perl linux-sysctl-defaults lmodern lynx mesa-vulkan-drivers psmisc publicsuffix qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 qtwebengine5-doc ruby tex-gyre texlive-plain-generic tipa tk wget x11-utils x11-xserver-utils xdg-user-dirs 
0 packages upgraded, 395 newly installed, 0 to remove and 0 not upgraded.
Need to get 350 MB of archives. After unpacking 1460 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-5 [272 kB]
Get: 2 http://deb.debian.org/debian unstable/main armhf flex armhf 2.6.4-8.2+b4 [405 kB]
Get: 3 http://deb.debian.org/debian unstable/main armhf poppler-data all 0.4.12-1 [1601 kB]
Get: 4 http://deb.debian.org/debian unstable/main armhf libpython3.13-minimal armhf 3.13.1-3 [844 kB]
Get: 5 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB]
Get: 6 http://deb.debian.org/debian unstable/main armhf python3.13-minimal armhf 3.13.1-3 [1840 kB]
Get: 7 http://deb.debian.org/debian unstable/main armhf python3-minimal armhf 3.13.1-2 [27.0 kB]
Get: 8 http://deb.debian.org/debian unstable/main armhf media-types all 10.1.0 [26.9 kB]
Get: 9 http://deb.debian.org/debian unstable/main armhf netbase all 6.4 [12.8 kB]
Get: 10 http://deb.debian.org/debian unstable/main armhf tzdata all 2025a-1 [259 kB]
Get: 11 http://deb.debian.org/debian unstable/main armhf libffi8 armhf 3.4.6-1 [20.0 kB]
Get: 12 http://deb.debian.org/debian unstable/main armhf readline-common all 8.2-6 [69.4 kB]
Get: 13 http://deb.debian.org/debian unstable/main armhf libreadline8t64 armhf 8.2-6 [146 kB]
Get: 14 http://deb.debian.org/debian unstable/main armhf libpython3.13-stdlib armhf 3.13.1-3 [1850 kB]
Get: 15 http://deb.debian.org/debian unstable/main armhf python3.13 armhf 3.13.1-3 [740 kB]
Get: 16 http://deb.debian.org/debian unstable/main armhf libpython3-stdlib armhf 3.13.1-2 [9952 B]
Get: 17 http://deb.debian.org/debian unstable/main armhf python3 armhf 3.13.1-2 [28.0 kB]
Get: 18 http://deb.debian.org/debian unstable/main armhf libproc2-0 armhf 2:4.0.4-7 [56.3 kB]
Get: 19 http://deb.debian.org/debian unstable/main armhf procps armhf 2:4.0.4-7 [866 kB]
Get: 20 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.24 [24.8 kB]
Get: 21 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB]
Get: 22 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB]
Get: 23 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3+b1 [42.3 kB]
Get: 24 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.23.1-1 [238 kB]
Get: 25 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB]
Get: 26 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-7 [1095 kB]
Get: 27 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40.4-1 [84.6 kB]
Get: 28 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB]
Get: 29 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.13.0-1 [1382 kB]
Get: 30 http://deb.debian.org/debian unstable/main armhf libtext-charwidth-perl armhf 0.04-11+b4 [9128 B]
Get: 31 http://deb.debian.org/debian unstable/main armhf libtext-wrapi18n-perl all 0.06-10 [8808 B]
Get: 32 http://deb.debian.org/debian unstable/main armhf ucf all 3.0048 [42.0 kB]
Get: 33 http://deb.debian.org/debian unstable/main armhf autoconf all 2.72-3 [493 kB]
Get: 34 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get: 35 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get: 36 http://deb.debian.org/debian unstable/main armhf autopoint all 0.23.1-1 [770 kB]
Get: 37 http://deb.debian.org/debian unstable/main armhf bison armhf 2:3.8.2+dfsg-1+b2 [1138 kB]
Get: 38 http://deb.debian.org/debian unstable/main armhf chrpath armhf 0.18-1 [12.6 kB]
Get: 39 http://deb.debian.org/debian unstable/main armhf cmake-data all 3.31.4-2 [2267 kB]
Get: 40 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-6 [9086 kB]
Get: 41 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB]
Get: 42 http://deb.debian.org/debian unstable/main armhf libarchive13t64 armhf 3.7.4-1.1 [306 kB]
Get: 43 http://deb.debian.org/debian unstable/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB]
Get: 44 http://deb.debian.org/debian unstable/main armhf libkrb5support0 armhf 1.21.3-4 [30.3 kB]
Get: 45 http://deb.debian.org/debian unstable/main armhf libcom-err2 armhf 1.47.2-1 [23.3 kB]
Get: 46 http://deb.debian.org/debian unstable/main armhf libk5crypto3 armhf 1.21.3-4 [75.8 kB]
Get: 47 http://deb.debian.org/debian unstable/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B]
Get: 48 http://deb.debian.org/debian unstable/main armhf libkrb5-3 armhf 1.21.3-4 [285 kB]
Get: 49 http://deb.debian.org/debian unstable/main armhf libgssapi-krb5-2 armhf 1.21.3-4 [116 kB]
Get: 50 http://deb.debian.org/debian unstable/main armhf libunistring5 armhf 1.3-1 [444 kB]
Get: 51 http://deb.debian.org/debian unstable/main armhf libidn2-0 armhf 2.3.7-2+b1 [125 kB]
Get: 52 http://deb.debian.org/debian unstable/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8+b1 [18.6 kB]
Get: 53 http://deb.debian.org/debian unstable/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8+b1 [50.6 kB]
Get: 54 http://deb.debian.org/debian unstable/main armhf libldap2 armhf 2.6.9+dfsg-1 [167 kB]
Get: 55 http://deb.debian.org/debian unstable/main armhf libnghttp2-14 armhf 1.64.0-1 [62.9 kB]
Get: 56 http://deb.debian.org/debian unstable/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB]
Get: 57 http://deb.debian.org/debian unstable/main armhf libp11-kit0 armhf 0.25.5-3 [385 kB]
Get: 58 http://deb.debian.org/debian unstable/main armhf libtasn1-6 armhf 4.19.0-3+b3 [43.9 kB]
Get: 59 http://deb.debian.org/debian unstable/main armhf libgnutls30t64 armhf 3.8.8-2 [1370 kB]
Get: 60 http://deb.debian.org/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB]
Get: 61 http://deb.debian.org/debian unstable/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB]
Get: 62 http://deb.debian.org/debian unstable/main armhf libcurl4t64 armhf 8.11.1-1+b1 [304 kB]
Get: 63 http://deb.debian.org/debian unstable/main armhf libjsoncpp26 armhf 1.9.6-3 [69.9 kB]
Get: 64 http://deb.debian.org/debian unstable/main armhf librhash1 armhf 1.4.5-1 [143 kB]
Get: 65 http://deb.debian.org/debian unstable/main armhf libuv1t64 armhf 1.48.0-7 [134 kB]
Get: 66 http://deb.debian.org/debian unstable/main armhf cmake armhf 3.31.4-2 [5912 kB]
Get: 67 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 68 http://deb.debian.org/debian unstable/main armhf libtool all 2.5.4-2 [539 kB]
Get: 69 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB]
Get: 70 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get: 71 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.14.1-1 [19.6 kB]
Get: 72 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.14.1-1 [8584 B]
Get: 73 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.192-4 [184 kB]
Get: 74 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB]
Get: 75 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.23.1-1 [1560 kB]
Get: 76 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 77 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get: 78 http://deb.debian.org/debian unstable/main armhf debhelper all 13.24.1 [920 kB]
Get: 79 http://deb.debian.org/debian unstable/main armhf python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 80 http://deb.debian.org/debian unstable/main armhf python3-more-itertools all 10.6.0-1 [65.3 kB]
Get: 81 http://deb.debian.org/debian unstable/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 82 http://deb.debian.org/debian unstable/main armhf python3-typeguard all 4.4.1-1 [37.0 kB]
Get: 83 http://deb.debian.org/debian unstable/main armhf python3-inflect all 7.3.1-2 [32.4 kB]
Get: 84 http://deb.debian.org/debian unstable/main armhf python3-jaraco.context all 6.0.0-1 [7984 B]
Get: 85 http://deb.debian.org/debian unstable/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 86 http://deb.debian.org/debian unstable/main armhf python3-pkg-resources all 75.6.0-1 [222 kB]
Get: 87 http://deb.debian.org/debian unstable/main armhf python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 88 http://deb.debian.org/debian unstable/main armhf python3-zipp all 3.21.0-1 [10.6 kB]
Get: 89 http://deb.debian.org/debian unstable/main armhf python3-setuptools all 75.6.0-1 [720 kB]
Get: 90 http://deb.debian.org/debian unstable/main armhf dh-python all 6.20250108 [113 kB]
Get: 91 http://deb.debian.org/debian unstable/main armhf libedit2 armhf 3.1-20250104-1 [78.0 kB]
Get: 92 http://deb.debian.org/debian unstable/main armhf libz3-4 armhf 4.13.3-1 [7252 kB]
Get: 93 http://deb.debian.org/debian unstable/main armhf libllvm19 armhf 1:19.1.7-1 [23.8 MB]
Get: 94 http://deb.debian.org/debian unstable/main armhf libclang-cpp19 armhf 1:19.1.7-1 [11.6 MB]
Get: 95 http://deb.debian.org/debian unstable/main armhf libclang1-19 armhf 1:19.1.7-1 [6611 kB]
Get: 96 http://deb.debian.org/debian unstable/main armhf libfmt10 armhf 10.1.1+ds1-4 [118 kB]
Get: 97 http://deb.debian.org/debian unstable/main armhf doxygen armhf 1.9.8+ds-2+b3 [4499 kB]
Get: 98 http://deb.debian.org/debian unstable/main armhf libpng16-16t64 armhf 1.6.45-1 [263 kB]
Get: 99 http://deb.debian.org/debian unstable/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [385 kB]
Get: 100 http://deb.debian.org/debian unstable/main armhf fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 101 http://deb.debian.org/debian unstable/main armhf fonts-dejavu-core all 2.37-8 [840 kB]
Get: 102 http://deb.debian.org/debian unstable/main armhf libfontenc1 armhf 1:1.1.8-1+b2 [20.9 kB]
Get: 103 http://deb.debian.org/debian unstable/main armhf x11-common all 1:7.7+24 [217 kB]
Get: 104 http://deb.debian.org/debian unstable/main armhf xfonts-encodings all 1:1.0.4-2.2 [577 kB]
Get: 105 http://deb.debian.org/debian unstable/main armhf xfonts-utils armhf 1:7.7+7 [84.2 kB]
Get: 106 http://deb.debian.org/debian unstable/main armhf fonts-urw-base35 all 20200910-8 [10.8 MB]
Get: 107 http://deb.debian.org/debian unstable/main armhf fontconfig-config armhf 2.15.0-2 [317 kB]
Get: 108 http://deb.debian.org/debian unstable/main armhf libfontconfig1 armhf 2.15.0-2 [371 kB]
Get: 109 http://deb.debian.org/debian unstable/main armhf fontconfig armhf 2.15.0-2 [462 kB]
Get: 110 http://deb.debian.org/debian unstable/main armhf fonts-lmodern all 2.005-1 [4540 kB]
Get: 111 http://deb.debian.org/debian unstable/main armhf libgs-common all 10.04.0~dfsg-2 [148 kB]
Get: 112 http://deb.debian.org/debian unstable/main armhf libgs10-common all 10.04.0~dfsg-2 [475 kB]
Get: 113 http://deb.debian.org/debian unstable/main armhf libavahi-common-data armhf 0.8-16 [112 kB]
Get: 114 http://deb.debian.org/debian unstable/main armhf libavahi-common3 armhf 0.8-16 [41.2 kB]
Get: 115 http://deb.debian.org/debian unstable/main armhf libdbus-1-3 armhf 1.16.0-1 [154 kB]
Get: 116 http://deb.debian.org/debian unstable/main armhf libavahi-client3 armhf 0.8-16 [44.6 kB]
Get: 117 http://deb.debian.org/debian unstable/main armhf libcups2t64 armhf 2.4.10-2+b1 [220 kB]
Get: 118 http://deb.debian.org/debian unstable/main armhf libidn12 armhf 1.42-2+b1 [77.5 kB]
Get: 119 http://deb.debian.org/debian unstable/main armhf libijs-0.35 armhf 0.35-15.1+b2 [13.4 kB]
Get: 120 http://deb.debian.org/debian unstable/main armhf libjbig2dec0 armhf 0.20-1+b3 [56.3 kB]
Get: 121 http://deb.debian.org/debian unstable/main armhf libjpeg62-turbo armhf 1:2.1.5-3+b1 [145 kB]
Get: 122 http://deb.debian.org/debian unstable/main armhf liblcms2-2 armhf 2.16-2 [131 kB]
Get: 123 http://deb.debian.org/debian unstable/main armhf libopenjp2-7 armhf 2.5.0-2+b4 [179 kB]
Get: 124 http://deb.debian.org/debian unstable/main armhf libpaper2 armhf 2.2.5-0.3 [15.6 kB]
Get: 125 http://deb.debian.org/debian unstable/main armhf libdeflate0 armhf 1.23-1+b1 [36.7 kB]
Get: 126 http://deb.debian.org/debian unstable/main armhf libjbig0 armhf 2.1-6.1+b2 [27.3 kB]
Get: 127 http://deb.debian.org/debian unstable/main armhf liblerc4 armhf 4.0.0+ds-5 [146 kB]
Get: 128 http://deb.debian.org/debian unstable/main armhf libsharpyuv0 armhf 1.5.0-0.1 [114 kB]
Get: 129 http://deb.debian.org/debian unstable/main armhf libwebp7 armhf 1.5.0-0.1 [273 kB]
Get: 130 http://deb.debian.org/debian unstable/main armhf libtiff6 armhf 4.5.1+git230720-5 [302 kB]
Get: 131 http://deb.debian.org/debian unstable/main armhf libxau6 armhf 1:1.0.11-1 [19.7 kB]
Get: 132 http://deb.debian.org/debian unstable/main armhf libxdmcp6 armhf 1:1.1.5-1 [26.4 kB]
Get: 133 http://deb.debian.org/debian unstable/main armhf libxcb1 armhf 1.17.0-2+b1 [140 kB]
Get: 134 http://deb.debian.org/debian unstable/main armhf libx11-data all 2:1.8.10-2 [337 kB]
Get: 135 http://deb.debian.org/debian unstable/main armhf libx11-6 armhf 2:1.8.10-2 [750 kB]
Get: 136 http://deb.debian.org/debian unstable/main armhf libice6 armhf 2:1.1.1-1 [58.5 kB]
Get: 137 http://deb.debian.org/debian unstable/main armhf libsm6 armhf 2:1.2.4-1 [33.5 kB]
Get: 138 http://deb.debian.org/debian unstable/main armhf libxt6t64 armhf 1:1.2.1-1.2+b2 [160 kB]
Get: 139 http://deb.debian.org/debian unstable/main armhf libgs10 armhf 10.04.0~dfsg-2+b1 [2205 kB]
Get: 140 http://deb.debian.org/debian unstable/main armhf ghostscript armhf 10.04.0~dfsg-2+b1 [50.8 kB]
Get: 141 http://deb.debian.org/debian unstable/main armhf libcdt5 armhf 2.42.4-2+b4 [38.0 kB]
Get: 142 http://deb.debian.org/debian unstable/main armhf libcgraph6 armhf 2.42.4-2+b4 [56.8 kB]
Get: 143 http://deb.debian.org/debian unstable/main armhf libaom3 armhf 3.11.0-1 [1599 kB]
Get: 144 http://deb.debian.org/debian unstable/main armhf libdav1d7 armhf 1.5.1-1 [268 kB]
Get: 145 http://deb.debian.org/debian unstable/main armhf libabsl20230802 armhf 20230802.1-4 [432 kB]
Get: 146 http://deb.debian.org/debian unstable/main armhf libgav1-1 armhf 0.19.0-3 [297 kB]
Get: 147 http://deb.debian.org/debian unstable/main armhf librav1e0.7 armhf 0.7.1-9 [585 kB]
Get: 148 http://deb.debian.org/debian unstable/main armhf libsvtav1enc2 armhf 2.3.0+dfsg-1 [970 kB]
Get: 149 http://deb.debian.org/debian unstable/main armhf libyuv0 armhf 0.0.1899.20250103-1 [87.0 kB]
Get: 150 http://deb.debian.org/debian unstable/main armhf libavif16 armhf 1.1.1-1 [103 kB]
Get: 151 http://deb.debian.org/debian unstable/main armhf libheif-plugin-dav1d armhf 1.19.5-1+b1 [11.2 kB]
Get: 152 http://deb.debian.org/debian unstable/main armhf libde265-0 armhf 1.0.15-1+b2 [145 kB]
Get: 153 http://deb.debian.org/debian unstable/main armhf libheif-plugin-libde265 armhf 1.19.5-1+b1 [14.5 kB]
Get: 154 http://deb.debian.org/debian unstable/main armhf libheif1 armhf 1.19.5-1+b1 [432 kB]
Get: 155 http://deb.debian.org/debian unstable/main armhf libimagequant0 armhf 2.18.0-1+b2 [30.5 kB]
Get: 156 http://deb.debian.org/debian unstable/main armhf libfribidi0 armhf 1.0.16-1 [24.6 kB]
Get: 157 http://deb.debian.org/debian unstable/main armhf libglib2.0-0t64 armhf 2.82.4-2 [1328 kB]
Get: 158 http://deb.debian.org/debian unstable/main armhf libgraphite2-3 armhf 1.3.14-2+b1 [63.1 kB]
Get: 159 http://deb.debian.org/debian unstable/main armhf libharfbuzz0b armhf 10.2.0-1 [419 kB]
Get: 160 http://deb.debian.org/debian unstable/main armhf libraqm0 armhf 0.10.2-1 [11.6 kB]
Get: 161 http://deb.debian.org/debian unstable/main armhf libxpm4 armhf 1:3.5.17-1+b3 [50.3 kB]
Get: 162 http://deb.debian.org/debian unstable/main armhf libgd3 armhf 2.3.3-12+b1 [105 kB]
Get: 163 http://deb.debian.org/debian unstable/main armhf libgts-0.7-5t64 armhf 0.7.6+darcs121130-5.2+b1 [133 kB]
Get: 164 http://deb.debian.org/debian unstable/main armhf libpixman-1-0 armhf 0.44.0-3 [164 kB]
Get: 165 http://deb.debian.org/debian unstable/main armhf libxcb-render0 armhf 1.17.0-2+b1 [114 kB]
Get: 166 http://deb.debian.org/debian unstable/main armhf libxcb-shm0 armhf 1.17.0-2+b1 [105 kB]
Get: 167 http://deb.debian.org/debian unstable/main armhf libxext6 armhf 2:1.3.4-1+b3 [45.2 kB]
Get: 168 http://deb.debian.org/debian unstable/main armhf libxrender1 armhf 1:0.9.10-1.1+b4 [25.0 kB]
Get: 169 http://deb.debian.org/debian unstable/main armhf libcairo2 armhf 1.18.2-2 [443 kB]
Get: 170 http://deb.debian.org/debian unstable/main armhf libltdl7 armhf 2.5.4-2 [412 kB]
Get: 171 http://deb.debian.org/debian unstable/main armhf libthai-data all 0.1.29-2 [168 kB]
Get: 172 http://deb.debian.org/debian unstable/main armhf libdatrie1 armhf 0.2.13-3+b1 [34.7 kB]
Get: 173 http://deb.debian.org/debian unstable/main armhf libthai0 armhf 0.1.29-2+b1 [46.0 kB]
Get: 174 http://deb.debian.org/debian unstable/main armhf libpango-1.0-0 armhf 1.56.1-1 [201 kB]
Get: 175 http://deb.debian.org/debian unstable/main armhf libpangoft2-1.0-0 armhf 1.56.1-1 [48.6 kB]
Get: 176 http://deb.debian.org/debian unstable/main armhf libpangocairo-1.0-0 armhf 1.56.1-1 [31.7 kB]
Get: 177 http://deb.debian.org/debian unstable/main armhf libpathplan4 armhf 2.42.4-2+b4 [40.0 kB]
Get: 178 http://deb.debian.org/debian unstable/main armhf libgvc6 armhf 2.42.4-2+b4 [583 kB]
Get: 179 http://deb.debian.org/debian unstable/main armhf libgvpr2 armhf 2.42.4-2+b4 [168 kB]
Get: 180 http://deb.debian.org/debian unstable/main armhf liblab-gamut1 armhf 2.42.4-2+b4 [198 kB]
Get: 181 http://deb.debian.org/debian unstable/main armhf libxmu6 armhf 2:1.1.3-3+b4 [51.2 kB]
Get: 182 http://deb.debian.org/debian unstable/main armhf libxaw7 armhf 2:1.0.16-1 [177 kB]
Get: 183 http://deb.debian.org/debian unstable/main armhf graphviz armhf 2.42.4-2+b4 [506 kB]
Get: 184 http://deb.debian.org/debian unstable/main armhf icu-devtools armhf 72.1-6 [189 kB]
Get: 185 http://deb.debian.org/debian unstable/main armhf libapache-pom-java all 33-2 [5852 B]
Get: 186 http://deb.debian.org/debian unstable/main armhf libasound2-data all 1.2.13-1 [21.1 kB]
Get: 187 http://deb.debian.org/debian unstable/main armhf libasound2t64 armhf 1.2.13-1+b1 [320 kB]
Get: 188 http://deb.debian.org/debian unstable/main armhf libboost1.83-dev armhf 1.83.0-4 [10.6 MB]
Get: 189 http://deb.debian.org/debian unstable/main armhf libboost-atomic1.83.0 armhf 1.83.0-4 [233 kB]
Get: 190 http://deb.debian.org/debian unstable/main armhf libboost-atomic1.83-dev armhf 1.83.0-4 [234 kB]
Get: 191 http://deb.debian.org/debian unstable/main armhf libboost-chrono1.83.0t64 armhf 1.83.0-4 [238 kB]
Get: 192 http://deb.debian.org/debian unstable/main armhf libboost-chrono1.83-dev armhf 1.83.0-4 [244 kB]
Get: 193 http://deb.debian.org/debian unstable/main armhf libboost-date-time1.83.0 armhf 1.83.0-4 [230 kB]
Get: 194 http://deb.debian.org/debian unstable/main armhf libboost-serialization1.83.0 armhf 1.83.0-4 [317 kB]
Get: 195 http://deb.debian.org/debian unstable/main armhf libboost-serialization1.83-dev armhf 1.83.0-4 [385 kB]
Get: 196 http://deb.debian.org/debian unstable/main armhf libboost-date-time1.83-dev armhf 1.83.0-4 [239 kB]
Get: 197 http://deb.debian.org/debian unstable/main armhf libboost-dev armhf 1.83.0.2+b2 [3832 B]
Get: 198 http://deb.debian.org/debian unstable/main armhf libboost-regex1.83.0 armhf 1.83.0-4 [308 kB]
Get: 199 http://deb.debian.org/debian unstable/main armhf libicu-dev armhf 72.1-6 [10.1 MB]
Get: 200 http://deb.debian.org/debian unstable/main armhf libboost-regex1.83-dev armhf 1.83.0-4 [337 kB]
Get: 201 http://deb.debian.org/debian unstable/main armhf libboost-iostreams1.83-dev armhf 1.83.0-4 [261 kB]
Get: 202 http://deb.debian.org/debian unstable/main armhf libboost-iostreams-dev armhf 1.83.0.2+b2 [3568 B]
Get: 203 http://deb.debian.org/debian unstable/main armhf libboost-system1.83.0 armhf 1.83.0-4 [230 kB]
Get: 204 http://deb.debian.org/debian unstable/main armhf libboost-system1.83-dev armhf 1.83.0-4 [232 kB]
Get: 205 http://deb.debian.org/debian unstable/main armhf libboost-thread1.83.0 armhf 1.83.0-4 [262 kB]
Get: 206 http://deb.debian.org/debian unstable/main armhf libboost-thread1.83-dev armhf 1.83.0-4 [276 kB]
Get: 207 http://deb.debian.org/debian unstable/main armhf libboost-thread-dev armhf 1.83.0.2+b2 [3612 B]
Get: 208 http://deb.debian.org/debian unstable/main armhf libcommons-parent-java all 56-1 [10.8 kB]
Get: 209 http://deb.debian.org/debian unstable/main armhf libcommons-logging-java all 1.3.0-1 [68.6 kB]
Get: 210 http://deb.debian.org/debian unstable/main armhf libdouble-conversion3 armhf 3.3.0-1+b2 [39.2 kB]
Get: 211 http://deb.debian.org/debian unstable/main armhf libdrm-common all 2.4.123-1 [8084 B]
Get: 212 http://deb.debian.org/debian unstable/main armhf libdrm2 armhf 2.4.123-1 [34.1 kB]
Get: 213 http://deb.debian.org/debian unstable/main armhf libdrm-amdgpu1 armhf 2.4.123-1 [20.4 kB]
Get: 214 http://deb.debian.org/debian unstable/main armhf libdrm-radeon1 armhf 2.4.123-1 [19.6 kB]
Get: 215 http://deb.debian.org/debian unstable/main armhf libglvnd0 armhf 1.7.0-1+b2 [51.8 kB]
Get: 216 http://deb.debian.org/debian unstable/main armhf libwayland-server0 armhf 1.23.0-1+b2 [27.9 kB]
Get: 217 http://deb.debian.org/debian unstable/main armhf libglapi-mesa armhf 24.3.4-2 [45.1 kB]
Get: 218 http://deb.debian.org/debian unstable/main armhf libsensors-config all 1:3.6.0-10 [14.6 kB]
Get: 219 http://deb.debian.org/debian unstable/main armhf libsensors5 armhf 1:3.6.0-10+b1 [32.3 kB]
Get: 220 http://deb.debian.org/debian unstable/main armhf libx11-xcb1 armhf 2:1.8.10-2 [241 kB]
Get: 221 http://deb.debian.org/debian unstable/main armhf libxcb-dri3-0 armhf 1.17.0-2+b1 [107 kB]
Get: 222 http://deb.debian.org/debian unstable/main armhf libxcb-present0 armhf 1.17.0-2+b1 [105 kB]
Get: 223 http://deb.debian.org/debian unstable/main armhf libxcb-randr0 armhf 1.17.0-2+b1 [116 kB]
Get: 224 http://deb.debian.org/debian unstable/main armhf libxcb-sync1 armhf 1.17.0-2+b1 [108 kB]
Get: 225 http://deb.debian.org/debian unstable/main armhf libxcb-xfixes0 armhf 1.17.0-2+b1 [109 kB]
Get: 226 http://deb.debian.org/debian unstable/main armhf libxshmfence1 armhf 1.3-1+b3 [8748 B]
Get: 227 http://deb.debian.org/debian unstable/main armhf mesa-libgallium armhf 24.3.4-2 [7324 kB]
Get: 228 http://deb.debian.org/debian unstable/main armhf libgbm1 armhf 24.3.4-2 [39.9 kB]
Get: 229 http://deb.debian.org/debian unstable/main armhf libwayland-client0 armhf 1.23.0-1+b2 [21.3 kB]
Get: 230 http://deb.debian.org/debian unstable/main armhf libegl-mesa0 armhf 24.3.4-2 [105 kB]
Get: 231 http://deb.debian.org/debian unstable/main armhf libegl1 armhf 1.7.0-1+b2 [29.1 kB]
Get: 232 http://deb.debian.org/debian unstable/main armhf libxcb-glx0 armhf 1.17.0-2+b1 [120 kB]
Get: 233 http://deb.debian.org/debian unstable/main armhf libxxf86vm1 armhf 1:1.1.4-1+b4 [18.2 kB]
Get: 234 http://deb.debian.org/debian unstable/main armhf libvulkan1 armhf 1.4.304.0-1 [113 kB]
Get: 235 http://deb.debian.org/debian unstable/main armhf libgl1-mesa-dri armhf 24.3.4-2 [42.2 kB]
Get: 236 http://deb.debian.org/debian unstable/main armhf libglx-mesa0 armhf 24.3.4-2 [123 kB]
Get: 237 http://deb.debian.org/debian unstable/main armhf libglx0 armhf 1.7.0-1+b2 [32.6 kB]
Get: 238 http://deb.debian.org/debian unstable/main armhf libgl1 armhf 1.7.0-1+b2 [88.2 kB]
Get: 239 http://deb.debian.org/debian unstable/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get: 240 http://deb.debian.org/debian unstable/main armhf x11proto-dev all 2024.1-1 [603 kB]
Get: 241 http://deb.debian.org/debian unstable/main armhf libxau-dev armhf 1:1.0.11-1 [23.0 kB]
Get: 242 http://deb.debian.org/debian unstable/main armhf libxdmcp-dev armhf 1:1.1.5-1 [42.9 kB]
Get: 243 http://deb.debian.org/debian unstable/main armhf xtrans-dev all 1.4.0-1 [98.7 kB]
Get: 244 http://deb.debian.org/debian unstable/main armhf libxcb1-dev armhf 1.17.0-2+b1 [180 kB]
Get: 245 http://deb.debian.org/debian unstable/main armhf libx11-dev armhf 2:1.8.10-2 [825 kB]
Get: 246 http://deb.debian.org/debian unstable/main armhf libglx-dev armhf 1.7.0-1+b2 [15.8 kB]
Get: 247 http://deb.debian.org/debian unstable/main armhf libgl-dev armhf 1.7.0-1+b2 [101 kB]
Get: 248 http://deb.debian.org/debian unstable/main armhf libegl-dev armhf 1.7.0-1+b2 [19.5 kB]
Get: 249 http://deb.debian.org/debian unstable/main armhf libpkgconf3 armhf 1.8.1-4 [31.8 kB]
Get: 250 http://deb.debian.org/debian unstable/main armhf pkgconf-bin armhf 1.8.1-4 [29.2 kB]
Get: 251 http://deb.debian.org/debian unstable/main armhf pkgconf armhf 1.8.1-4 [26.1 kB]
Get: 252 http://deb.debian.org/debian unstable/main armhf pkg-config armhf 1.8.1-4 [14.0 kB]
Get: 253 http://deb.debian.org/debian unstable/main armhf libeigen3-dev all 3.4.0-4 [1041 kB]
Get: 254 http://deb.debian.org/debian unstable/main armhf libevdev2 armhf 1.13.3+dfsg-1 [26.2 kB]
Get: 255 http://deb.debian.org/debian unstable/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-10+b1 [164 kB]
Get: 256 http://deb.debian.org/debian unstable/main armhf libexpat1-dev armhf 2.6.4-1 [140 kB]
Get: 257 http://deb.debian.org/debian unstable/main armhf libfontbox-java all 1:1.8.16-5 [211 kB]
Get: 258 http://deb.debian.org/debian unstable/main armhf libgpg-error0 armhf 1.51-3 [71.9 kB]
Get: 259 http://deb.debian.org/debian unstable/main armhf libgcrypt20 armhf 1.11.0-7 [727 kB]
Get: 260 http://deb.debian.org/debian unstable/main armhf libgles1 armhf 1.7.0-1+b2 [12.2 kB]
Get: 261 http://deb.debian.org/debian unstable/main armhf libgles2 armhf 1.7.0-1+b2 [17.7 kB]
Get: 262 http://deb.debian.org/debian unstable/main armhf libgles-dev armhf 1.7.0-1+b2 [50.8 kB]
Get: 263 http://deb.debian.org/debian unstable/main armhf libglew2.2 armhf 2.2.0-4+b2 [166 kB]
Get: 264 http://deb.debian.org/debian unstable/main armhf libopengl0 armhf 1.7.0-1+b2 [32.1 kB]
Get: 265 http://deb.debian.org/debian unstable/main armhf libglu1-mesa armhf 9.0.2-1.1+b3 [141 kB]
Get: 266 http://deb.debian.org/debian unstable/main armhf libopengl-dev armhf 1.7.0-1+b2 [5372 B]
Get: 267 http://deb.debian.org/debian unstable/main armhf libglu1-mesa-dev armhf 9.0.2-1.1+b3 [181 kB]
Get: 268 http://deb.debian.org/debian unstable/main armhf libglew-dev armhf 2.2.0-4+b2 [258 kB]
Get: 269 http://deb.debian.org/debian unstable/main armhf libgudev-1.0-0 armhf 238-6 [12.7 kB]
Get: 270 http://deb.debian.org/debian unstable/main armhf libharfbuzz-subset0 armhf 10.2.0-1 [493 kB]
Get: 271 http://deb.debian.org/debian unstable/main armhf libwacom-common all 2.13.0-1 [98.0 kB]
Get: 272 http://deb.debian.org/debian unstable/main armhf libwacom9 armhf 2.13.0-1 [20.8 kB]
Get: 273 http://deb.debian.org/debian unstable/main armhf libinput-bin armhf 1.26.2-1 [23.6 kB]
Get: 274 http://deb.debian.org/debian unstable/main armhf libmtdev1t64 armhf 1.1.6-1.2+b1 [21.3 kB]
Get: 275 http://deb.debian.org/debian unstable/main armhf libinput10 armhf 1.26.2-1 [112 kB]
Get: 276 http://deb.debian.org/debian unstable/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 277 http://deb.debian.org/debian unstable/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 278 http://deb.debian.org/debian unstable/main armhf libjs-sphinxdoc all 8.1.3-4 [30.4 kB]
Get: 279 http://deb.debian.org/debian unstable/main armhf libkpathsea6 armhf 2024.20240313.70630+ds-5+b1 [147 kB]
Get: 280 http://deb.debian.org/debian unstable/main armhf libmd4c0 armhf 0.5.2-2+b1 [43.8 kB]
Get: 281 http://deb.debian.org/debian unstable/main armhf libminizip1t64 armhf 1:1.3.dfsg+really1.3.1-1+b1 [50.9 kB]
Get: 282 http://deb.debian.org/debian unstable/main armhf libmpfi0 armhf 1.5.4+ds-4 [28.8 kB]
Get: 283 http://deb.debian.org/debian unstable/main armhf libnspr4 armhf 2:4.36-1 [87.8 kB]
Get: 284 http://deb.debian.org/debian unstable/main armhf libnss3 armhf 2:3.107-1 [1204 kB]
Get: 285 http://deb.debian.org/debian unstable/main armhf libopus0 armhf 1.5.2-2 [2801 kB]
Get: 286 http://deb.debian.org/debian unstable/main armhf libpaper-utils armhf 2.2.5-0.3 [14.9 kB]
Get: 287 http://deb.debian.org/debian unstable/main armhf libpcre2-16-0 armhf 10.44-5 [226 kB]
Get: 288 http://deb.debian.org/debian unstable/main armhf libpdfbox-java all 1:1.8.16-5 [5527 kB]
Get: 289 http://deb.debian.org/debian unstable/main armhf libpotrace0 armhf 1.16-2+b2 [22.7 kB]
Get: 290 http://deb.debian.org/debian unstable/main armhf libptexenc1 armhf 2024.20240313.70630+ds-5+b1 [44.8 kB]
Get: 291 http://deb.debian.org/debian unstable/main armhf libpython3.13 armhf 3.13.1-3 [1869 kB]
Get: 292 http://deb.debian.org/debian unstable/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB]
Get: 293 http://deb.debian.org/debian unstable/main armhf libpython3.13-dev armhf 3.13.1-3 [3802 kB]
Get: 294 http://deb.debian.org/debian unstable/main armhf libpython3-dev armhf 3.13.1-2 [10.2 kB]
Get: 295 http://deb.debian.org/debian unstable/main armhf shared-mime-info armhf 2.4-5+b2 [754 kB]
Get: 296 http://deb.debian.org/debian unstable/main armhf libqt5core5t64 armhf 5.15.15+dfsg-2 [1595 kB]
Get: 297 http://deb.debian.org/debian unstable/main armhf libqt5concurrent5t64 armhf 5.15.15+dfsg-2 [43.3 kB]
Get: 298 http://deb.debian.org/debian unstable/main armhf libqt5dbus5t64 armhf 5.15.15+dfsg-2 [192 kB]
Get: 299 http://deb.debian.org/debian unstable/main armhf libqt5network5t64 armhf 5.15.15+dfsg-2 [603 kB]
Get: 300 http://deb.debian.org/debian unstable/main armhf libxcb-icccm4 armhf 0.4.2-1 [26.4 kB]
Get: 301 http://deb.debian.org/debian unstable/main armhf libxcb-util1 armhf 0.4.1-1 [22.5 kB]
Get: 302 http://deb.debian.org/debian unstable/main armhf libxcb-image0 armhf 0.4.0-2+b2 [21.0 kB]
Get: 303 http://deb.debian.org/debian unstable/main armhf libxcb-keysyms1 armhf 0.4.0-1+b3 [15.1 kB]
Get: 304 http://deb.debian.org/debian unstable/main armhf libxcb-render-util0 armhf 0.3.9-1+b2 [16.6 kB]
Get: 305 http://deb.debian.org/debian unstable/main armhf libxcb-shape0 armhf 1.17.0-2+b1 [106 kB]
Get: 306 http://deb.debian.org/debian unstable/main armhf libxcb-xinerama0 armhf 1.17.0-2+b1 [105 kB]
Get: 307 http://deb.debian.org/debian unstable/main armhf libxcb-xinput0 armhf 1.17.0-2+b1 [127 kB]
Get: 308 http://deb.debian.org/debian unstable/main armhf libxcb-xkb1 armhf 1.17.0-2+b1 [126 kB]
Get: 309 http://deb.debian.org/debian unstable/main armhf xkb-data all 2.42-1 [790 kB]
Get: 310 http://deb.debian.org/debian unstable/main armhf libxkbcommon0 armhf 1.7.0-2 [99.7 kB]
Get: 311 http://deb.debian.org/debian unstable/main armhf libxkbcommon-x11-0 armhf 1.7.0-2 [14.3 kB]
Get: 312 http://deb.debian.org/debian unstable/main armhf libqt5gui5t64 armhf 5.15.15+dfsg-2 [2686 kB]
Get: 313 http://deb.debian.org/debian unstable/main armhf libqt5widgets5t64 armhf 5.15.15+dfsg-2 [2122 kB]
Get: 314 http://deb.debian.org/debian unstable/main armhf libqt5xml5t64 armhf 5.15.15+dfsg-2 [111 kB]
Get: 315 http://deb.debian.org/debian unstable/main armhf libqt5designer5 armhf 5.15.15-5 [2651 kB]
Get: 316 http://deb.debian.org/debian unstable/main armhf libqt5designercomponents5 armhf 5.15.15-5 [649 kB]
Get: 317 http://deb.debian.org/debian unstable/main armhf libqt5sql5t64 armhf 5.15.15+dfsg-2 [111 kB]
Get: 318 http://deb.debian.org/debian unstable/main armhf libqt5help5 armhf 5.15.15-5 [132 kB]
Get: 319 http://deb.debian.org/debian unstable/main armhf libqt5opengl5t64 armhf 5.15.15+dfsg-2 [128 kB]
Get: 320 http://deb.debian.org/debian unstable/main armhf libqt5printsupport5t64 armhf 5.15.15+dfsg-2 [189 kB]
Get: 321 http://deb.debian.org/debian unstable/main armhf libqt5test5t64 armhf 5.15.15+dfsg-2 [135 kB]
Get: 322 http://deb.debian.org/debian unstable/main armhf libvulkan-dev armhf 1.4.304.0-1 [1452 kB]
Get: 323 http://deb.debian.org/debian unstable/main armhf libxext-dev armhf 2:1.3.4-1+b3 [100 kB]
Get: 324 http://deb.debian.org/debian unstable/main armhf qt5-qmake-bin armhf 5.15.15+dfsg-2 [914 kB]
Get: 325 http://deb.debian.org/debian unstable/main armhf qtchooser armhf 66-2 [23.6 kB]
Get: 326 http://deb.debian.org/debian unstable/main armhf qt5-qmake armhf 5.15.15+dfsg-2 [224 kB]
Get: 327 http://deb.debian.org/debian unstable/main armhf qtbase5-dev-tools armhf 5.15.15+dfsg-2 [659 kB]
Get: 328 http://deb.debian.org/debian unstable/main armhf qtbase5-dev armhf 5.15.15+dfsg-2 [1070 kB]
Get: 329 http://deb.debian.org/debian unstable/main armhf libqt5opengl5-dev armhf 5.15.15+dfsg-2 [51.4 kB]
Get: 330 http://deb.debian.org/debian unstable/main armhf libqt5positioning5 armhf 5.15.15+dfsg-3 [180 kB]
Get: 331 http://deb.debian.org/debian unstable/main armhf libqt5serialport5 armhf 5.15.15-2 [29.8 kB]
Get: 332 http://deb.debian.org/debian unstable/main armhf libqt5positioning5-plugins armhf 5.15.15+dfsg-3 [77.0 kB]
Get: 333 http://deb.debian.org/debian unstable/main armhf libqt5qml5 armhf 5.15.15+dfsg-3 [1217 kB]
Get: 334 http://deb.debian.org/debian unstable/main armhf libqt5qmlmodels5 armhf 5.15.15+dfsg-3 [167 kB]
Get: 335 http://deb.debian.org/debian unstable/main armhf libqt5quick5 armhf 5.15.15+dfsg-3 [1392 kB]
Get: 336 http://deb.debian.org/debian unstable/main armhf libqt5positioningquick5 armhf 5.15.15+dfsg-3 [38.9 kB]
Get: 337 http://deb.debian.org/debian unstable/main armhf libqt5qmlworkerscript5 armhf 5.15.15+dfsg-3 [33.2 kB]
Get: 338 http://deb.debian.org/debian unstable/main armhf libqt5quickparticles5 armhf 5.15.15+dfsg-3 [185 kB]
Get: 339 http://deb.debian.org/debian unstable/main armhf libqt5quickshapes5 armhf 5.15.15+dfsg-3 [86.1 kB]
Get: 340 http://deb.debian.org/debian unstable/main armhf libqt5quicktest5 armhf 5.15.15+dfsg-3 [52.7 kB]
Get: 341 http://deb.debian.org/debian unstable/main armhf libqt5quickwidgets5 armhf 5.15.15+dfsg-3 [36.7 kB]
Get: 342 http://deb.debian.org/debian unstable/main armhf libqt5sql5-sqlite armhf 5.15.15+dfsg-2 [54.9 kB]
Get: 343 http://deb.debian.org/debian unstable/main armhf libqt5webchannel5 armhf 5.15.15-2 [50.5 kB]
Get: 344 http://deb.debian.org/debian unstable/main armhf qt5-qmltooling-plugins armhf 5.15.15+dfsg-3 [156 kB]
Get: 345 http://deb.debian.org/debian unstable/main armhf qtdeclarative5-dev-tools armhf 5.15.15+dfsg-3 [529 kB]
Get: 346 http://deb.debian.org/debian unstable/main armhf qtdeclarative5-dev armhf 5.15.15+dfsg-3 [432 kB]
Get: 347 http://deb.debian.org/debian unstable/main armhf libqt5webchannel5-dev armhf 5.15.15-2 [10.6 kB]
Get: 348 http://deb.debian.org/debian unstable/main armhf libqt5webengine-data all 5.15.17+dfsg2-3 [7285 kB]
Get: 349 http://deb.debian.org/debian unstable/main armhf libsnappy1v5 armhf 1.2.1-1+b1 [27.0 kB]
Get: 350 http://deb.debian.org/debian unstable/main armhf libvpx9 armhf 1.15.0-1 [1508 kB]
Get: 351 http://deb.debian.org/debian unstable/main armhf libwebpdemux2 armhf 1.5.0-0.1 [112 kB]
Get: 352 http://deb.debian.org/debian unstable/main armhf libwebpmux3 armhf 1.5.0-0.1 [123 kB]
Get: 353 http://deb.debian.org/debian unstable/main armhf libxcomposite1 armhf 1:0.4.6-1 [15.8 kB]
Get: 354 http://deb.debian.org/debian unstable/main armhf libxdamage1 armhf 1:1.1.6-1+b2 [14.8 kB]
Get: 355 http://deb.debian.org/debian unstable/main armhf libxfixes3 armhf 1:6.0.0-2+b4 [18.6 kB]
Get: 356 http://deb.debian.org/debian unstable/main armhf libxrandr2 armhf 2:1.5.4-1+b3 [33.2 kB]
Get: 357 http://deb.debian.org/debian unstable/main armhf libxslt1.1 armhf 1.1.35-1.1+b1 [212 kB]
Get: 358 http://deb.debian.org/debian unstable/main armhf libxtst6 armhf 2:1.2.5-1 [24.1 kB]
Get: 359 http://deb.debian.org/debian unstable/main armhf libqt5webenginecore5 armhf 5.15.17+dfsg2-3 [35.5 MB]
Get: 360 http://deb.debian.org/debian unstable/main armhf libqt5webengine5 armhf 5.15.17+dfsg2-3 [152 kB]
Get: 361 http://deb.debian.org/debian unstable/main armhf libqt5webenginewidgets5 armhf 5.15.17+dfsg2-3 [111 kB]
Get: 362 http://deb.debian.org/debian unstable/main armhf libsynctex2 armhf 2024.20240313.70630+ds-5+b1 [49.5 kB]
Get: 363 http://deb.debian.org/debian unstable/main armhf libteckit0 armhf 2.5.12+ds1-1+b1 [259 kB]
Get: 364 http://deb.debian.org/debian unstable/main armhf libtexlua53-5 armhf 2024.20240313.70630+ds-5+b1 [83.1 kB]
Get: 365 http://deb.debian.org/debian unstable/main armhf libtidy58 armhf 2:5.8.0-1+b1 [185 kB]
Get: 366 http://deb.debian.org/debian unstable/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get: 367 http://deb.debian.org/debian unstable/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3+b1 [71.3 kB]
Get: 368 http://deb.debian.org/debian unstable/main armhf libtirpc-dev armhf 1.3.4+ds-1.3+b1 [180 kB]
Get: 369 http://deb.debian.org/debian unstable/main armhf libxi6 armhf 2:1.8.2-1 [73.6 kB]
Get: 370 http://deb.debian.org/debian unstable/main armhf libzzip-0-13t64 armhf 0.13.72+dfsg.1-1.3 [53.1 kB]
Get: 371 http://deb.debian.org/debian unstable/main armhf tex-common all 6.18 [32.5 kB]
Get: 372 http://deb.debian.org/debian unstable/main armhf preview-latex-style all 13.2-1 [350 kB]
Get: 373 http://deb.debian.org/debian unstable/main armhf python3.13-dev armhf 3.13.1-3 [504 kB]
Get: 374 http://deb.debian.org/debian unstable/main armhf python3-dev armhf 3.13.1-2 [26.1 kB]
Get: 375 http://deb.debian.org/debian unstable/main armhf python3-sip armhf 4.19.25+dfsg-5+b3 [167 kB]
Get: 376 http://deb.debian.org/debian unstable/main armhf sip-dev armhf 4.19.25+dfsg-5+b3 [234 kB]
Get: 377 http://deb.debian.org/debian unstable/main armhf python3-sip-dev armhf 4.19.25+dfsg-5+b3 [110 kB]
Get: 378 http://deb.debian.org/debian unstable/main armhf qdoc-qt5 armhf 5.15.15-5 [516 kB]
Get: 379 http://deb.debian.org/debian unstable/main armhf qhelpgenerator-qt5 armhf 5.15.15-5 [53.1 kB]
Get: 380 http://deb.debian.org/debian unstable/main armhf qt5-assistant armhf 5.15.15-5 [330 kB]
Get: 381 http://deb.debian.org/debian unstable/main armhf qtattributionsscanner-qt5 armhf 5.15.15-5 [29.8 kB]
Get: 382 http://deb.debian.org/debian unstable/main armhf qtpositioning5-dev armhf 5.15.15+dfsg-3 [21.4 kB]
Get: 383 http://deb.debian.org/debian unstable/main armhf qttools5-dev-tools armhf 5.15.15-5 [921 kB]
Get: 384 http://deb.debian.org/debian unstable/main armhf qttools5-dev armhf 5.15.15-5 [179 kB]
Get: 385 http://deb.debian.org/debian unstable/main armhf qtwebengine5-dev armhf 5.15.17+dfsg2-3 [70.7 kB]
Get: 386 http://deb.debian.org/debian unstable/main armhf t1utils armhf 1.41-4 [54.7 kB]
Get: 387 http://deb.debian.org/debian unstable/main armhf texlive-binaries armhf 2024.20240313.70630+ds-5+b1 [6100 kB]
Get: 388 http://deb.debian.org/debian unstable/main armhf xdg-utils all 1.2.1-2 [75.8 kB]
Get: 389 http://deb.debian.org/debian unstable/main armhf texlive-base all 2024.20250114-1 [22.8 MB]
Get: 390 http://deb.debian.org/debian unstable/main armhf texlive-fonts-recommended all 2024.20250114-1 [4991 kB]
Get: 391 http://deb.debian.org/debian unstable/main armhf texlive-latex-base all 2024.20250114-1 [1282 kB]
Get: 392 http://deb.debian.org/debian unstable/main armhf texlive-latex-recommended all 2024.20250114-1 [8760 kB]
Get: 393 http://deb.debian.org/debian unstable/main armhf texlive-pictures all 2024.20250114-1 [17.1 MB]
Get: 394 http://deb.debian.org/debian unstable/main armhf texlive-latex-extra all 2024.20250114-1 [24.7 MB]
Get: 395 http://deb.debian.org/debian unstable/main armhf tidy armhf 2:5.8.0-1+b1 [28.1 kB]
Fetched 350 MB in 9s (40.7 MB/s)
Preconfiguring packages ...
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Unpacking m4 (1.4.19-5) ...
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Unpacking flex (2.6.4-8.2+b4) ...
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Unpacking poppler-data (0.4.12-1) ...
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Setting up libpython3.13-minimal:armhf (3.13.1-3) ...
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Unpacking python3-minimal (3.13.1-2) ...
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Unpacking readline-common (8.2-6) ...
Selecting previously unselected package libreadline8t64:armhf.
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Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64'
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Current default time zone: 'Etc/UTC'
Local time is now:      Mon Jan 27 08:15:08 UTC 2025.
Universal Time is now:  Mon Jan 27 08:15:08 UTC 2025.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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No schema files found: doing nothing.
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Regenerating fonts cache... done.
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Not building database; man-db/auto-update is not 'true'.
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update-language: texlive-base not installed and configured, doing nothing!
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Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b5) ...
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Setting up libxt6t64:armhf (1:1.2.1-1.2+b2) ...
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Setting up python3-typing-extensions (4.12.2-2) ...
Setting up libxext-dev:armhf (2:1.3.4-1+b3) ...
Setting up libqt5sql5t64:armhf (5.15.15+dfsg-2) ...
Setting up libharfbuzz-subset0:armhf (10.2.0-1) ...
Setting up libpangoft2-1.0-0:armhf (1.56.1-1) ...
Setting up libcups2t64:armhf (2.4.10-2+b1) ...
Setting up libboost-thread-dev:armhf (1.83.0.2+b2) ...
Setting up libpangocairo-1.0-0:armhf (1.56.1-1) ...
Setting up python3-sip (4.19.25+dfsg-5+b3) ...
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Setting up libinput10:armhf (1.26.2-1) ...
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Setting up libqt5dbus5t64:armhf (5.15.15+dfsg-2) ...
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Setting up python3-jaraco.functools (4.1.0-1) ...
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Setting up libcurl4t64:armhf (8.11.1-1+b1) ...
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Setting up libqt5webchannel5:armhf (5.15.15-2) ...
Setting up texlive-binaries (2024.20240313.70630+ds-5+b1) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libegl1:armhf (1.7.0-1+b2) ...
Setting up cmake (3.31.4-2) ...
Setting up libqt5positioning5-plugins:armhf (5.15.15+dfsg-3) ...
Setting up texlive-base (2024.20250114-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
Setting up python3-pkg-resources (75.6.0-1) ...
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Setting up libglx-dev:armhf (1.7.0-1+b2) ...
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Setting up libqt5quickwidgets5:armhf (5.15.15+dfsg-3) ...
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Setting up libqt5quickparticles5:armhf (5.15.15+dfsg-3) ...
Setting up libgles-dev:armhf (1.7.0-1+b2) ...
Setting up libqt5printsupport5t64:armhf (5.15.15+dfsg-2) ...
Setting up libqt5quicktest5:armhf (5.15.15+dfsg-3) ...
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Setting up libqt5webenginewidgets5:armhf (5.15.17+dfsg2-3) ...
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Setting up qt5-assistant (5.15.15-5) ...
Setting up qttools5-dev-tools (5.15.15-5) ...
Setting up qtdeclarative5-dev:armhf (5.15.15+dfsg-3) ...
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Setting up qtpositioning5-dev:armhf (5.15.15+dfsg-3) ...
Setting up qttools5-dev:armhf (5.15.15-5) ...
Setting up libqt5webchannel5-dev:armhf (5.15.15-2) ...
Setting up qtwebengine5-dev:armhf (5.15.17+dfsg2-3) ...
Setting up libheif-plugin-dav1d:armhf (1.19.5-1+b1) ...
Setting up libheif-plugin-libde265:armhf (1.19.5-1+b1) ...
Setting up libheif1:armhf (1.19.5-1+b1) ...
Setting up libgd3:armhf (2.3.3-12+b1) ...
Setting up libgvc6 (2.42.4-2+b4) ...
Setting up graphviz (2.42.4-2+b4) ...
Processing triggers for libc-bin (2.40-6) ...
Processing triggers for tex-common (6.18) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../ball_1.5.0+git20180813.37fc53c-11_source.changes
dpkg-buildpackage: info: source package ball
dpkg-buildpackage: info: source version 1.5.0+git20180813.37fc53c-11
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Nilesh Patra <nilesh@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --buildsystem=cmake --builddirectory=build # --with python3
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
[ -d source ] && cd source ; \
if [ -f Makefile ] ; \
then  \
	make clean ; \
	cd PYTHON/EXTENSIONS; \
	make clean; \
	rm -rf ../lib/Linux*; \
	rm -rf ../doc/doxygen/latex/*; \
	rm -f /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/config.status 2>/dev/null; \
fi
rm -f data/BALLView/translations/BALLView.de_DE.qm
rm -f data/BALLView/translations/BALLView.zh_TW.qm
rm -f doc/TUTORIAL/*.aux
rm -rf build
find . -name "*.o" | xargs -r rm
find . -type l | xargs -r rm
find doc/TUTORIAL/ -name "tutorial.*" | egrep -v ".(tex|bib)$" |xargs -r rm
rm -f include/BALL/BALL.doc
# find . -name "*.doc" -delete
# Remove self-create UI header file
rm -f include/BALL/VIEW/UIC/ui_assignBondOrderConfigurationDialog.h \
      include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h \
      include/BALL/VIEW/UIC/ui_atomOverview.h
make[1]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
   dh_autoreconf_clean -O--buildsystem=cmake -O--builddirectory=build
   dh_clean -O--buildsystem=cmake -O--builddirectory=build
	rm -f debian/debhelper-build-stamp
	rm -rf debian/.debhelper/
	rm -f -- debian/libball1.5-data.substvars debian/libball1.5.substvars debian/libball1.5-dev.substvars debian/libballview1.5.substvars debian/libballview1.5-dev.substvars debian/ballview.substvars debian/libball1.5-doc.substvars debian/files
	rm -fr -- debian/libball1.5-data/ debian/tmp/ debian/libball1.5/ debian/libball1.5-dev/ debian/libballview1.5/ debian/libballview1.5-dev/ debian/ballview/ debian/libball1.5-doc/
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \)
 debian/rules binary
dh binary --buildsystem=cmake --builddirectory=build # --with python3
   dh_update_autotools_config -O--buildsystem=cmake -O--builddirectory=build
   dh_autoreconf -O--buildsystem=cmake -O--builddirectory=build
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
mkdir -p build
cd build && LDFLAGS="-Wl,-z,relro -Wl,-z,now -ltirpc" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security" CPPFLAGS="-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" \
            cmake .. -DCMAKE_SOURCE_DIR=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c -DCMAKE_INSTALL_PREFIX=./usr \
	    -DBALL_PATH=/usr -DBALL_DATA_PATH=/usr/share/BALL-1.5/data \
	    -DCMAKE_VERBOSE_MAKEFILE=ON
CMake Deprecation Warning at CMakeLists.txt:8 (CMAKE_MINIMUM_REQUIRED):
  Compatibility with CMake < 3.10 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value.  Or, use the <min>...<max> syntax
  to tell CMake that the project requires at least <min> but has been updated
  to work with policies introduced by <max> or earlier.


CMake Deprecation Warning at CMakeLists.txt:10 (CMAKE_POLICY):
  The OLD behavior for policy CMP0042 will be removed from a future version
  of CMake.

  The cmake-policies(7) manual explains that the OLD behaviors of all
  policies are deprecated and that a policy should be set to OLD only under
  specific short-term circumstances.  Projects should be ported to the NEW
  behavior and not rely on setting a policy to OLD.


-- The C compiler identification is GNU 14.2.0
-- The CXX compiler identification is GNU 14.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Compiler checks for conversion: OFF
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of char
-- Check size of char - done
-- Check size of short
-- Check size of short - done
-- Check size of int
-- Check size of int - done
-- Check size of long
-- Check size of long - done
-- Check size of size_t
-- Check size of size_t - done
-- Check size of void*
-- Check size of void* - done
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Check size of unsigned int
-- Check size of unsigned int - done
-- Check size of unsigned long
-- Check size of unsigned long - done
-- Check size of unsigned long long
-- Check size of unsigned long long - done
-- Check size of float
-- Check size of float - done
-- Check size of double
-- Check size of double - done
-- Check size of uint64_t
-- Check size of uint64_t - done
-- Check size of uint32_t
-- Check size of uint32_t - done
-- Check size of uint16_t
-- Check size of uint16_t - done
-- Looking for C++ include unistd.h
-- Looking for C++ include unistd.h - found
-- Looking for C++ include process.h
-- Looking for C++ include process.h - not found
-- Looking for C++ include time.h
-- Looking for C++ include time.h - found
-- Looking for C++ include dirent.h
-- Looking for C++ include dirent.h - found
-- Looking for C++ include direct.h
-- Looking for C++ include direct.h - not found
-- Looking for C++ include pwd.h
-- Looking for C++ include pwd.h - found
-- Looking for C++ include stdint.h
-- Looking for C++ include stdint.h - found
-- Looking for C++ include sys/time.h
-- Looking for C++ include sys/time.h - found
-- Looking for C++ include sys/stat.h
-- Looking for C++ include sys/stat.h - found
-- Looking for C++ include sys/times.h
-- Looking for C++ include sys/times.h - found
-- Looking for C++ include sys/types.h
-- Looking for C++ include sys/types.h - found
-- Looking for C++ include sys/param.h
-- Looking for C++ include sys/param.h - found
-- Looking for C++ include sys/sysinfo.h
-- Looking for C++ include sys/sysinfo.h - found
-- Performing Test BALL_HAS_MODE_T
-- Performing Test BALL_HAS_MODE_T - Success
-- Looking for C++ include ieeefp.h
-- Looking for C++ include ieeefp.h - not found
-- Looking for kill
-- Looking for kill - found
-- Looking for sysconf
-- Looking for sysconf - found
-- Performing Test BALL_ALLOW_LONG64_TYPE_OVERLOADS
-- Performing Test BALL_ALLOW_LONG64_TYPE_OVERLOADS - Success
-- Performing Test BALL_HAS_THREAD_LOCAL
-- Performing Test BALL_HAS_THREAD_LOCAL - Success
-- Performing Test BALL_HAS_NOEXCEPT
-- Performing Test BALL_HAS_NOEXCEPT - Success
-- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_FUNCTIONS
-- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_FUNCTIONS - Success
-- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_INITLIST_INSERT
-- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_INITLIST_INSERT - Success
-- Looking for vsnprintf
-- Looking for vsnprintf - found
-- [GCC only] STL debug mode: OFF
-- Found BISON: /usr/bin/bison
-- Found FLEX: /usr/bin/flex
-- Checking for yylex_destroy support in flex
-- Checking for yylex_destroy support in flex - Not found
-- Looking for C++ include rpc/types.h
-- Looking for C++ include rpc/types.h - found
-- Performing Test XDR_HAS_RPC_XDR_H
-- Performing Test XDR_HAS_RPC_XDR_H - Success
-- Looking for xdr_int
-- Looking for xdr_int - not found
CMake Warning at cmake/FindXDR.cmake:67 (MESSAGE):
  Could not locate xdr symbols in libc or libnsl.  Persistence will be
  disabled!
Call Stack (most recent call first):
  cmake/BALLConfigXDR.cmake:1 (FIND_PACKAGE)
  CMakeLists.txt:135 (INCLUDE)


CMake Warning (dev) at cmake/BALLConfigBoost.cmake:38 (FIND_PACKAGE):
  Policy CMP0167 is not set: The FindBoost module is removed.  Run "cmake
  --help-policy CMP0167" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

Call Stack (most recent call first):
  CMakeLists.txt:138 (INCLUDE)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.55") found components: chrono date_time iostreams regex serialization system thread
-- Could NOT find LPSolve (missing: LPSOLVE_LIBRARIES LPSOLVE_INCLUDE_PATH LPSOLVE_LINKS) 
-- Looking for math.h
-- Looking for math.h - found
CMake Warning (dev) at /usr/share/cmake-3.31/Modules/FindPackageHandleStandardArgs.cmake:441 (message):
  The package name passed to `find_package_handle_standard_args` (LibSVM)
  does not match the name of the calling package (libSVM).  This can lead to
  problems in calling code that expects `find_package` result variables
  (e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
  cmake/FindlibSVM.cmake:165 (find_package_handle_standard_args)
  CMakeLists.txt:196 (FIND_PACKAGE)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Could NOT find LibSVM (missing: LIBSVM_LIBRARY LIBSVM_INCLUDE_DIR LIBSVM_INCLUDE_DIRS LIBSVM_ROOT_DIR) 
-- [Warning] FindTBB.cmake: The use of TBB_ARCHITECTURE and TBB_COMPILER is deprecated and may not be supported in future versions. Please set  (using tbbvars.[bat|csh|sh]).
-- Looked for Threading Building Blocks in /opt/intel/tbb;/usr/local/include;/usr/include;/usr
-- Intel Threading Building Blocks not found!
-- Checking for module 'mpi-c'
--   Package 'mpi-c', required by 'virtual:world', not found
-- Could NOT find MPI_C (missing: MPI_C_LIB_NAMES MPI_C_HEADER_DIR MPI_C_WORKS) 
-- Checking for module 'mpi-cxx'
--   Package 'mpi-cxx', required by 'virtual:world', not found
-- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) 
-- Could NOT find MPI (missing: MPI_C_FOUND MPI_CXX_FOUND) 
-- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0")
CMake Warning (dev) at /usr/share/cmake-3.31/Modules/FindOpenGL.cmake:415 (message):
  Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when
  available.  Run "cmake --help-policy CMP0072" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  FindOpenGL found both a legacy GL library:

    OPENGL_gl_LIBRARY: /usr/lib/arm-linux-gnueabihf/libGL.so

  and GLVND libraries for OpenGL and GLX:

    OPENGL_opengl_LIBRARY: /usr/lib/arm-linux-gnueabihf/libOpenGL.so
    OPENGL_glx_LIBRARY: /usr/lib/arm-linux-gnueabihf/libGLX.so

  OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for
  compatibility with CMake 3.10 and below the legacy GL library will be used.
Call Stack (most recent call first):
  CMakeLists.txt:355 (FIND_PACKAGE)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found OpenGL: /usr/lib/arm-linux-gnueabihf/libOpenGL.so
-- Found GLEW: /usr/include (found version "2.2.0")
-- Could not find RTfact header file (RTpie/IRayTracer.hpp)! Real time ray tracing will be disabled!
CMake Warning (dev) at CMakeLists.txt:403 (FIND_PACKAGE):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13.1", minimum required is "3")
CMake Warning (dev) at CMakeLists.txt:405 (FIND_PACKAGE):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.13.so (found suitable version "3.13.1", minimum required is "3")
-- Found SIP version: 4.19.25
-- Could NOT find SIP (missing: SIP_LIBRARIES) (Required is at least version "4.8")
-- Disabling python support.
-- Setting CTDSchema version to its default value (v1.7)
-- Setting CTDConverter version to its default value (v2.0)
-- Could not find SpaceNavigator libraries. Disabling the SpaceNavigator plugin
-- Could not find VRPN libraries. Disabling the VRPN plugin
-- Could not find VRPN libraries. Disabling the VRPNHD plugin
-- Python support has not been enabled. Disabling the Jupyter plugin.
CMake Warning (dev) at cmake/BALLViewTranslations.cmake:36 (ADD_CUSTOM_COMMAND):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  source/APPLICATIONS/BALLVIEW/CMakeLists.txt:52 (INCLUDE)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake/BALLViewTranslations.cmake:36 (ADD_CUSTOM_COMMAND):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  source/APPLICATIONS/BALLVIEW/CMakeLists.txt:52 (INCLUDE)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot
-- Found LATEX: /usr/bin/latex
CMake Warning (dev) at CMakeLists.txt:775 (INCLUDE):
  Policy CMP0145 is not set: The Dart and FindDart modules are removed.  Run
  "cmake --help-policy CMP0145" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.

This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at /usr/share/cmake-3.31/Modules/Dart.cmake:47 (message):
  Policy CMP0145 is not set: The Dart and FindDart modules are removed.  Run
  "cmake --help-policy CMP0145" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  CMakeLists.txt:775 (INCLUDE)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- 
-- -----------------------------------------------------------------
-- 
-- You have successfully configured BALL.
-- 
-- For a full list of make targets execute:
-- 'make targets'
-- 
-- -----------------------------------------------------------------
-- 
-- Configuring done (20.4s)
-- Generating done (9.4s)
-- Build files have been written to: /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build
make[1]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
   debian/rules override_dh_auto_build-arch
make[1]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c'
## Fix upstream issue of missing UI files
## ...
## Uhmmm, seems we need to do this for all UI files mentioned in
##   source/VIEW/DIALOGS/sources.cmake
## but I really hope some cmake expert might be able to find a clue
## how to trigger cmake to do it as intended by upstream.
## Somehow the code
##   ADD_BALL_UIFILES("VIEW/DIALOGS" "")
## needs to be called before the build code below can be started
make -C build BALL VIEW BALLView build_tests install
make[2]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
/usr/bin/cmake -S/build/reproducible-path/ball-1.5.0+git20180813.37fc53c -B/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 BALL
make[3]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
/usr/bin/cmake -S/build/reproducible-path/ball-1.5.0+git20180813.37fc53c -B/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles 16
make  -f CMakeFiles/Makefile2 CMakeFiles/BALL.dir/all
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL_autogen_timestamp_deps.dir/build.make CMakeFiles/BALL_autogen_timestamp_deps.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen_timestamp_deps.dir/DependInfo.cmake "--color="
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL_autogen_timestamp_deps.dir/build.make CMakeFiles/BALL_autogen_timestamp_deps.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  0%] [FLEX][CIFParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PCIFParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserLexer.C source/FORMAT/CIFParserLexer.l
[  0%] [BISON][CIFParserParser] Building parser with bison 3.8.2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.h -pCIFParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C source/FORMAT/CIFParserParser.y
source/FORMAT/CIFParserParser.y: warning: 5 shift/reduce conflicts [-Wconflicts-sr]
source/FORMAT/CIFParserParser.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
[  0%] [FLEX][GAMESSDatParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PGAMESSDatParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserLexer.C source/FORMAT/GAMESSDatParserLexer.l
[  0%] [BISON][GAMESSDatParserParser] Building parser with bison 3.8.2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserParser.h -pGAMESSDatParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserParser.C source/FORMAT/GAMESSDatParserParser.y
source/FORMAT/GAMESSDatParserParser.y: warning: 3 shift/reduce conflicts [-Wconflicts-sr]
source/FORMAT/GAMESSDatParserParser.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
[  0%] [FLEX][expressionParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PExpressionParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/KERNEL/expressionParserLexer.C source/KERNEL/expressionParserLexer.l
[  0%] [BISON][expressionParserParser] Building parser with bison 3.8.2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/KERNEL/expressionParserParser.h -pExpressionParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/KERNEL/expressionParserParser.C source/KERNEL/expressionParserParser.y
[  0%] [FLEX][parsedFunctionLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PParsedFunction -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MATHS/parsedFunctionLexer.C source/MATHS/parsedFunctionLexer.l
[  0%] [BISON][parsedFunctionParser] Building parser with bison 3.8.2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MATHS/parsedFunctionParser.h -pParsedFunction -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MATHS/parsedFunctionParser.C source/MATHS/parsedFunctionParser.y
[  0%] [FLEX][GAFFCESParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PGAFFCESParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C source/MOLMEC/AMBER/GAFFCESParserLexer.l
[  0%] [BISON][GAFFCESParserParser] Building parser with bison 3.8.2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserParser.h -pGAFFCESParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserParser.C source/MOLMEC/AMBER/GAFFCESParserParser.y
[  0%] [FLEX][smartsParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PSmartsParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserLexer.C source/STRUCTURE/smartsParserLexer.l
[  0%] [BISON][smartsParserParser] Building parser with bison 3.8.2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserParser.h -pSmartsParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserParser.C source/STRUCTURE/smartsParserParser.y
source/STRUCTURE/smartsParserParser.y: warning: 26 shift/reduce conflicts [-Wconflicts-sr]
source/STRUCTURE/smartsParserParser.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
[  0%] [FLEX][smilesParserLexer] Building scanner with flex 2.6.4
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/flex -PSmilesParser -o/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserLexer.C source/STRUCTURE/smilesParserLexer.l
[  0%] [BISON][smilesParserParser] Building parser with bison 3.8.2
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c && /usr/bin/bison --defines=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserParser.h -pSmilesParser -d -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserParser.C source/STRUCTURE/smilesParserParser.y
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  0%] Built target BALL_autogen_timestamp_deps
make  -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake "--color="
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  0%] Automatic MOC for target BALL
/usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen.dir/AutogenInfo.json Release
/usr/bin/cmake -E touch /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/timestamp
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  0%] Built target BALL_autogen
make  -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL.dir/DependInfo.cmake "--color="
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/objectCreator.C.o
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[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/objectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/moleculeObjectCreator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C: In member function 'virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   89 |                         BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C: In member function 'virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   89 |                         BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   89 |                         BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C: In member function 'virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   89 |                         BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:108:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  108 |                         BALL_FOREACH_BOND(*s, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/moleculeObjectCreator.C:108:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  108 |                         BALL_FOREACH_BOND(*s, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/persistenceManager.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/persistenceManager.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/persistenceManager.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/preferencesObject.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/processor.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/property.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/property.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/property.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/property.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/property.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/selectable.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/textPersistenceManager.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/timeStamp.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/visitor.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/molecularInformation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/molecularInformation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/molecularInformation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/CONCEPT/molecularInformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/constants.C.o
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[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/exception.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/exception.C.o -MF CMakeFiles/BALL.dir/source/COMMON/exception.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/exception.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/exception.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/hash.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/hash.C.o -MF CMakeFiles/BALL.dir/source/COMMON/hash.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/hash.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/hash.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/init.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/init.C.o -MF CMakeFiles/BALL.dir/source/COMMON/init.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/init.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/init.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/logStream.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/logStream.C.o -MF CMakeFiles/BALL.dir/source/COMMON/logStream.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/logStream.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/logStream.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/rtti.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/rtti.C.o -MF CMakeFiles/BALL.dir/source/COMMON/rtti.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/rtti.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/rtti.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/version.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/version.C.o -MF CMakeFiles/BALL.dir/source/COMMON/version.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/version.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/COMMON/version.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/graphAlgorithms.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/molecularGraph.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/molecularGraph.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/GRAPH/molecularGraph.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[  6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/treeWidth.C.o
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[  6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/bitVector.C.o
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[  6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/options.C.o
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[  6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularExpression.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/regularExpression.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/regularExpression.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/regularExpression.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/regularExpression.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData1D.C.o
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[  6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/regularData2D.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData3D.C.o
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[ 12%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/string.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/string.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/string.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/string.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DATATYPE/string.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o -MF CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o.d -o CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
  237 |                         ConstForwardIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:250:37:   required from here
  250 |                                 for (box_it2 = box_it->beginBox(); +box_it2; ++box_it2)
      |                                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits& BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = BALL::ACEFastAtomType*]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::ACEFastAtomType*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::ACEFastAtomType*; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::ACEFastAtomType*; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::ACEFastAtomType*]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::ACEFastAtomType*>; DataType = BALL::HashGridBox3<BALL::ACEFastAtomType*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::ACEFastAtomType*; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::ACEFastAtomType*>, BALL::HashGridBox3<BALL::ACEFastAtomType*>, unsigned int, BALL::HashGridBox3<BALL::ACEFastAtomType*>::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/atomicContactEnergy.C:250:36:   required from here
  250 |                                 for (box_it2 = box_it->beginBox(); +box_it2; ++box_it2)
      |                                                ~~~~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/composedEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/composedEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/composedEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o -MF CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o.d -o CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C: In function 'double BALL::calculateCoulomb(const AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   90 | for (first_atom_iterator = (atom_container).beginAtom(); \
      |                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:23:17: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
   23 |                 BALL_FOREACH_ATOM_PAIR(atoms, atom_it1, atom_it2)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   92 |   for (second_atom_iterator = (atom_container).beginAtom(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/coulomb.C:23:17: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
   23 |                 BALL_FOREACH_ATOM_PAIR(atoms, atom_it1, atom_it2)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o -MF CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o.d -o CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C: In function 'double BALL::calculateDistanceCoulomb(const AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   90 | for (first_atom_iterator = (atom_container).beginAtom(); \
      |                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:30:17: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
   30 |                 BALL_FOREACH_ATOM_PAIR(atoms, atom_iterator1, atom_iterator2)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   92 |   for (second_atom_iterator = (atom_container).beginAtom(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/distanceCoulomb.C:30:17: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
   30 |                 BALL_FOREACH_ATOM_PAIR(atoms, atom_iterator1, atom_iterator2)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o -MF CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/energyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/ENERGY/energyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/amiraMeshFile.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C: In member function 'virtual bool BALL::AntechamberFile::write(const BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:133:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  133 |                 BALL_FOREACH_BOND(ac, at_it, bit)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:133:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  133 |                 BALL_FOREACH_BOND(ac, at_it, bit)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C: In member function 'virtual bool BALL::AntechamberFile::write(const BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/antechamberFile.C:133:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  133 |                 BALL_FOREACH_BOND(ac, at_it, bit)
      |                 ^~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/bruker1DFile.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/bruker2DFile.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/commandlineParser.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeProtein(BALL::Protein*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:187:58: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  187 | for (residue_iterator = (residue_container).beginResidue(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:806:25: note: in expansion of macro 'BALL_FOREACH_RESIDUE'
  806 |                         BALL_FOREACH_RESIDUE(*prot,ri)
      |                         ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeProtein(BALL::Protein*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:187:58: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  187 | for (residue_iterator = (residue_container).beginResidue(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:806:25: note: in expansion of macro 'BALL_FOREACH_RESIDUE'
  806 |                         BALL_FOREACH_RESIDUE(*prot,ri)
      |                         ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeResidue(BALL::Residue*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:820:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  820 |                         BALL_FOREACH_ATOM(*res, pai)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeResidue(BALL::Residue*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:820:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  820 |                         BALL_FOREACH_ATOM(*res, pai)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeMolecule(BALL::Molecule*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:982:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  982 |                         BALL_FOREACH_ATOM(*molecule, a_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:990:52: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  990 |                         a_it = molecule->beginAtom();
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:991:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  991 |                         BALL_FOREACH_ATOM(*molecule, a_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:1001:25: note: in expansion of macro 'BALL_FOREACH_BOND'
 1001 |                         BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:1001:25: note: in expansion of macro 'BALL_FOREACH_BOND'
 1001 |                         BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C: In member function 'void BALL::DockResultFile::writeMolecule(BALL::Molecule*, QXmlStreamWriter&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:1001:25: note: in expansion of macro 'BALL_FOREACH_BOND'
 1001 |                         BALL_FOREACH_BOND(*molecule, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:1007:52: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1007 |                         a_it = molecule->beginAtom();
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/dockResultFile.C:1008:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
 1008 |                         BALL_FOREACH_ATOM(*molecule, a_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CCP4File.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h: In member function 'BALL::CIFFile::SaveFrame& BALL::CIFFile::SaveFrame::operator=(const BALL::CIFFile::SaveFrame&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:76:31: warning: implicitly-declared 'BALL::CIFFile::Item& BALL::CIFFile::Item::operator=(const BALL::CIFFile::Item&)' is deprecated [-Wdeprecated-copy]
   76 |                         class SaveFrame
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:134:9: note: because 'BALL::CIFFile::Item' has user-provided 'BALL::CIFFile::Item::Item(const BALL::CIFFile::Item&)'
  134 |         CIFFile::Item::Item(const Item& item)
      |         ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C: In constructor 'BALL::CIFFile::Datacontent::Datacontent(BALL::CIFFile::SaveFrame)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:379:29: note: synthesized method 'BALL::CIFFile::SaveFrame& BALL::CIFFile::SaveFrame::operator=(const BALL::CIFFile::SaveFrame&)' first required here
  379 |                 saveframe = new_saveframe;
      |                             ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C: In constructor 'BALL::CIFFile::Datacontent::Datacontent(BALL::CIFFile::Item)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:385:28: warning: implicitly-declared 'BALL::CIFFile::Item& BALL::CIFFile::Item::operator=(const BALL::CIFFile::Item&)' is deprecated [-Wdeprecated-copy]
  385 |                 dataitem = new_item;
      |                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/CIFFile.C:134:9: note: because 'BALL::CIFFile::Item' has user-provided 'BALL::CIFFile::Item::Item(const BALL::CIFFile::Item&)'
  134 |         CIFFile::Item::Item(const Item& item)
      |         ^~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/DCDFile.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/DSN6File.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C: In member function 'virtual bool BALL::GAMESSDatFile::write(const BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/GAMESSDatFile.C:88:46: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   88 |                 for (atIt = system.beginAtom(); +atIt; ++atIt)
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/genericMolFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/genericMolFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C: In member function 'virtual bool BALL::HINFile::write(const BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:153:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  153 |                 for (atom_it = system.beginAtom(); +atom_it; ++atom_it)
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HINFile.C:377:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  377 |                 for (atom_it = system.beginAtom(); +atom_it; ++atom_it)
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HMOFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HMOFile.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/HMOFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/INIFile.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/JCAMPFile.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/KCFFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C: In member function 'virtual bool BALL::KCFFile::write(const BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/KCFFile.C:91:46: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   91 |                 for (ai = molecule.beginAtom(); +ai; ++ai)
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/lineBasedFile.C
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C: In member function 'virtual bool BALL::MOLFile::write(const BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:164:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  164 |                 BALL_FOREACH_BOND(molecule, it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:164:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  164 |                 BALL_FOREACH_BOND(molecule, it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C: In member function 'virtual bool BALL::MOLFile::write(const BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOLFile.C:164:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  164 |                 BALL_FOREACH_BOND(molecule, it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/molFileFactory.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/molFileFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACInputFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACInputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACInputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACOutputFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOPACOutputFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOPACOutputFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SDFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SDFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOLFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/SDFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SDFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/MOL2File.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C: In member function 'virtual bool BALL::MOL2File::write(const BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:127:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  127 |                 BALL_FOREACH_BOND(new_molecule, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:127:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  127 |                 BALL_FOREACH_BOND(new_molecule, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C: In member function 'virtual bool BALL::MOL2File::write(const BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:127:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  127 |                 BALL_FOREACH_BOND(new_molecule, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:162:50: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  162 |                 atom_it = new_molecule.beginAtom();
      |                                                  ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:212:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  212 |                         BALL_FOREACH_BOND(new_molecule, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:212:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  212 |                         BALL_FOREACH_BOND(new_molecule, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C: In member function 'bool BALL::MOL2File::containsAtomChilds_(BALL::AtomContainerConstIterator&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/MOL2File.C:993:65: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  993 |                 for (children_it = frag_it->beginChildComposite(); +children_it; ++children_it)
      |                                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::ChildCompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/NMRStarFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C: In member function 'bool BALL::NMRStarFile::assignShifts_(BALLToBMRBMapper&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:1204:98: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1204 |                         r_it = const_cast<Chain*>(ball_to_bmrb_mapping.getChain())->beginResidue();
      |                                                                                                  ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C: In member function 'bool BALL::NMRStarFile::assignShifts_(BALLToBMRBMapper&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:1204:98: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
 1204 |                         r_it = const_cast<Chain*>(ball_to_bmrb_mapping.getChain())->beginResidue();
      |                                                                                                  ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C: In member function 'int BALL::NMRStarFile::valueToInt_(BALL::String)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/NMRStarFile.C:2277:45: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
 2277 |                         } catch (Exception::InvalidFormat) {
      |                                             ^~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/paramFile.C
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/parameters.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/parameters.C: In copy constructor 'BALL::Parameters::Parameters(const BALL::Parameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/parameters.C:19:25: warning: implicitly-declared 'BALL::INIFile::INIFile(const BALL::INIFile&)' is deprecated [-Wdeprecated-copy]
   19 |                         INI_file_(parameters.INI_file_)
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameters.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/parameters.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/INIFile.h:378:32: note: because 'BALL::INIFile' has user-provided 'const BALL::INIFile& BALL::INIFile::operator=(const BALL::INIFile&)'
  378 |                 const INIFile& operator = (const INIFile& file)
      |                                ^~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/parameterSection.C
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBdefs.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBdefs.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C: In member function 'bool BALL::PDBFile::parseLine(const char*, BALL::Size, const char*, ...)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileGeneral.C:381:24: warning: 'char* strncpy(char*, const char*, size_t)' output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation]
  381 |                 strncpy(formats, "%.6s", 4);
      |                 ~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In member function 'void BALL::PDBFile::postprocessSheetsTurns_(QuadrupleList&, SecStructList&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:195:86: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  195 |                                 for (protein_res_it = current_protein_->beginResidue(); !protein_res_it.isEnd();        ++protein_res_it)
      |                                                                                      ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In member function 'void BALL::PDBFile::postprocessSheetsTurns_(QuadrupleList&, SecStructList&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:195:86: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  195 |                                 for (protein_res_it = current_protein_->beginResidue(); !protein_res_it.isEnd();        ++protein_res_it)
      |                                                                                      ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In member function 'void BALL::PDBFile::postprocessRandomCoils_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:287:70: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  287 |                         for (protein_res_it = chain_it->beginResidue();
      |                                                                      ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In static member function 'static void BALL::PDBFile::updateAdditionalAtomInfo_(const BALL::PDB::Structure::AtomEntry&, BALL::PDB::AdditionalAtomInfo&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:1460:40: warning: 'char* strncpy(char*, const char*, size_t)' specified bound 4 equals destination size [-Wstringop-truncation]
 1460 |                                 strncpy(aai.residue_name, atom.residue->getName().c_str(), 4);
      |                                 ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In member function 'void BALL::PDBFile::writeSEQRESSection_(const std::vector<std::pair<char, BALL::String> >&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:1785:32: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 3 bytes from a string of length 3 [-Wstringop-truncation]
 1785 |                         strncpy(sr.residue_name[res_counter++], seq, 3);
      |                         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C: In member function 'void BALL::PDBFile::writeCoordinateSection_(const BALL::PDB::Structure&, const BALL::PDBInfo&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBFileDetails.C:1553:40: warning: 'char* strncpy(char*, const char*, size_t)' specified bound 4 equals destination size [-Wstringop-truncation]
 1553 |                                 strncpy(atom_info.residue_name, atom_info.current_residue->getName().c_str(), 4);
      |                                 ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBInfo.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBInfo.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBRecords.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBInfo.h:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/PDBRecords.C
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/pubchemDownloader.C
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/resourceFile.C
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SCWRLRotamerFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/SCWRLRotamerFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/trajectoryFile.C
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/trajectoryFileFactory.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/trajectoryFileFactory.C: In static member function 'static BALL::TrajectoryFile* BALL::TrajectoryFileFactory::detectFormat(const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/trajectoryFileFactory.C:103:75: warning: unused parameter 'name' [-Wunused-parameter]
  103 |         TrajectoryFile* TrajectoryFileFactory::detectFormat(const String& name)
      |                                                             ~~~~~~~~~~~~~~^~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/TRRFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/TRRFile.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/trajectoryFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/TRRFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/TRRFile.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/XYZFile.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/FORMAT/XYZFile.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserParser.y:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C: In function 'int CIFParserparse()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C:1662:20: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
 1662 |       yyerror (YY_("syntax error"));
      |                    ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C:309:22: note: in definition of macro 'YY_'
  309 | #  define YY_(Msgid) Msgid
      |                      ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C:1773:16: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
 1773 |   yyerror (YY_("memory exhausted"));
      |                ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserParser.C:309:22: note: in definition of macro 'YY_'
  309 | #  define YY_(Msgid) Msgid
      |                      ^~~~~
source/FORMAT/CIFParserParser.y:233:33: warning: '%s' directive writing up to 2549 bytes into a region of size between 3 and 2552 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:233:18: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:230:33: warning: '%s' directive writing up to 2549 bytes into a region of size between 2 and 2551 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:230:18: note: 'sprintf' output between 2 and 5100 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:227:33: warning: '%s' directive writing up to 2549 bytes into a region of size between 3 and 2552 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:227:18: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:217:33: warning: '%s' directive writing up to 2549 bytes into a region of size between 2 and 2551 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:217:18: note: 'sprintf' output between 2 and 5100 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:214:95: warning: '%s' directive writing up to 2549 bytes into a region of size between 3 and 2552 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:214:80: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:213:95: warning: '%s' directive writing up to 2549 bytes into a region of size between 3 and 2552 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:213:80: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:205:159: warning: '%s' directive writing up to 2549 bytes into a region of size between 2 and 2551 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:205:144: note: 'sprintf' output between 2 and 5100 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:204:139: warning: '%s' directive writing up to 2549 bytes into a region of size between 3 and 2552 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:204:124: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:203:139: warning: '%s' directive writing up to 2549 bytes into a region of size between 3 and 2552 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:203:124: note: 'sprintf' output between 1 and 7648 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:196:159: warning: '%s' directive writing up to 2549 bytes into a region of size between 2 and 2551 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:196:144: note: 'sprintf' output between 2 and 5100 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:195:139: warning: '%s' directive writing up to 2549 bytes into a region of size between 3 and 2552 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:195:124: note: 'sprintf' output between 1 and 5099 bytes into a destination of size 2552
source/FORMAT/CIFParserParser.y:194:139: warning: '%s' directive writing up to 2549 bytes into a region of size between 3 and 2552 [-Wformat-overflow=]
source/FORMAT/CIFParserParser.y:194:124: note: 'sprintf' output between 1 and 7648 bytes into a destination of size 2552
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserLexer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/CIFFile.h:17,
                 from source/FORMAT/CIFParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserLexer.C: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/CIFParserLexer.C:2176:17: warning: 'void yyunput(int, char*)' defined but not used [-Wunused-function]
 2176 |     static void yyunput (int c, char * yy_bp )
      |                 ^~~~~~~
source/FORMAT/CIFParserLexer.l: In function 'int CIFParserlex()':
source/FORMAT/CIFParserLexer.l:223:10: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
source/FORMAT/CIFParserLexer.l:207:10: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
source/FORMAT/CIFParserLexer.l:200:10: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
source/FORMAT/CIFParserLexer.l:135:10: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
source/FORMAT/CIFParserLexer.l:117:10: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
source/FORMAT/CIFParserLexer.l:90:15: warning: 'char* strncpy(char*, const char*, size_t)' output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation]
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserParser.C
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserLexer.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/FORMAT/GAMESSDatParserLexer.C:2637:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 2637 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/atom.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/atom.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/atom.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/atom.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atom.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atom.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atom.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'BALL::Size BALL::AtomContainer::countBonds() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:230:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  230 |                 BALL_FOREACH_BOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:230:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  230 |                 BALL_FOREACH_BOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'BALL::Size BALL::AtomContainer::countBonds() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:230:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  230 |                 BALL_FOREACH_BOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'BALL::Size BALL::AtomContainer::countInterBonds() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:124:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  124 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:244:17: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  244 |                 BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:126:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  126 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:244:17: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  244 |                 BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'BALL::Size BALL::AtomContainer::countIntraBonds() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:258:17: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  258 |                 BALL_FOREACH_INTRABOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:258:17: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  258 |                 BALL_FOREACH_INTRABOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor<BALL::Bond>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:124:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  124 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:460:17: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  460 |                 BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor<BALL::Bond>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:124:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  124 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:460:17: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  460 |                 BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:126:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  126 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:460:17: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  460 |                 BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor<BALL::Bond>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:126:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  126 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:460:17: note: in expansion of macro 'BALL_FOREACH_INTERBOND'
  460 |                 BALL_FOREACH_INTERBOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C: In member function 'bool BALL::AtomContainer::applyIntraBond(BALL::UnaryProcessor<BALL::Bond>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:484:17: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  484 |                 BALL_FOREACH_INTRABOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:484:17: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
  484 |                 BALL_FOREACH_INTRABOND(*this, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h: In instantiation of 'void BALL::cloneBonds(const AtomContainerType&, AtomContainerType&) [with AtomContainerType = AtomContainer]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/atomContainer.C:91:20:   required from here
   91 |                         BALL::cloneBonds(atom_container, *this);
      |                         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:79:65: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   79 |                         for (bond_iter = atom_iter_a->beginBond(); bond_iter != atom_iter_a->endBond(); ++bond_iter)
      |                                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/bond.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/bond.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/bond.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/bond.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/bond.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/bond.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/chain.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/chain.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/chain.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/chain.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/chain.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/chain.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expression.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/expression.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/expression.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/expression.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expression.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expression.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expression.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expressionPredicate.C
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expressionTree.C
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/expressionParser.C
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/extractors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/extractors.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/extractors.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/fragment.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/fragment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/global.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/global.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/global.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/global.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/global.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/global.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/global.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecularInteractions.C
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecule.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/molecule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleicAcid.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleicAcid.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleicAcid.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleotide.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/nucleotide.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/nucleotide.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PDBAtom.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PDBAtom.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/PDBAtom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PDBAtom.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/predicate.C
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/protein.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/protein.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/protein.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/protein.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/protein.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/protein.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/PTE.C
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/residue.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/residue.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/residue.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/residue.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C: In member function 'BALL::Angle BALL::Residue::getTorsionPsi() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:135:53: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  135 |                                 for (it = beginAtom(); +it; ++it)
      |                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:143:59: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |                                 for (it = next->beginAtom(); +it; ++it)
      |                                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C: In member function 'BALL::Angle BALL::Residue::getTorsionPhi() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:199:53: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  199 |                                 for (it = beginAtom(); +it; ++it)
      |                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:207:63: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  207 |                                 for (it = previous->beginAtom(); +it; ++it)
      |                                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C: In member function 'BALL::Angle BALL::Residue::getTorsionOmega() const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:262:53: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                                 for (it = beginAtom(); +it; ++it)
      |                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/residue.C:270:59: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  270 |                                 for (it = next->beginAtom(); +it; ++it)
      |                                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/secondaryStructure.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/secondaryStructure.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/selector.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/selector.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/selector.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/selector.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/selector.C
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/standardPredicates.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/standardPredicates.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/standardPredicates.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/system.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/system.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/system.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/system.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/system.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/KERNEL/system.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParserParser.C.o
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source/KERNEL/expressionParserParser.y:11:2: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
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/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/KERNEL/expressionParserLexer.C:1845:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 1845 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
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/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/vector3.C.o -MF CMakeFiles/BALL.dir/source/MATHS/vector3.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/vector3.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MATHS/vector3.C
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/vector4.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/vector4.C.o -MF CMakeFiles/BALL.dir/source/MATHS/vector4.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/vector4.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MATHS/vector4.C
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.C.o -MF CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MATHS/parsedFunctionParser.C
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.C.o -MF CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MATHS/parsedFunctionLexer.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MATHS/parsedFunctionLexer.C:1869:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 1869 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amber.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amber.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:63: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |                                         values[i] = v.values[i];
      |                                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |                         SingleValues(const SingleValues& v)
      |                         ^~~~~~~~~~~~
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C: In member function 'virtual bool BALL::AmberBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:84:58: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   84 |                         for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C: In member function 'virtual bool BALL::AmberBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:84:58: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   84 |                         for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberBend.C:87:44: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   87 |                                 for (it1 = it2, ++it1; +it1 ; ++it1)
      |                                            ^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C: In member function 'const BALL::AmberNonBonded& BALL::AmberNonBonded::operator=(const BALL::AmberNonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:127:49: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  127 |                 ForceFieldComponent::operator = (anb);
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:17: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |                 ForceFieldComponent(const ForceFieldComponent&  force_field_component);
      |                 ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:27: warning: implicitly-declared 'BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)' is deprecated [-Wdeprecated-copy]
   34 |         class BALL_EXPORT ForceFieldComponent : public ScoringComponent
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:26:25: note: because 'BALL::ScoringComponent' has user-provided 'BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)'
   26 |                         ScoringComponent(const ScoringComponent& sc);
      |                         ^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C: In member function 'const BALL::AmberNonBonded& BALL::AmberNonBonded::operator=(const BALL::AmberNonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberNonBonded.C:127:49: note: synthesized method 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' first required here
  127 |                 ForceFieldComponent::operator = (anb);
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberStretch.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:63: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |                                         values[i] = v.values[i];
      |                                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |                         SingleValues(const SingleValues& v)
      |                         ^~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberTorsion.h:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C: In member function 'virtual bool BALL::AmberTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:115:58: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  115 |                         for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C: In member function 'virtual bool BALL::AmberTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:115:58: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  115 |                         for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:124:74: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  124 |                                         for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:139:119: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  139 |                                                         for (it3 = const_cast<Atom*>(it1->getSecondAtom())->beginBond(); +it3 ; ++it3)
      |                                                                                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:186:125: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  186 |                                                                                                 tmp.values = values.values[j];
      |                                                                                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |                         SingleValues(const SingleValues& v)
      |                         ^~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:296:74: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  296 |                                         for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:301:60: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  301 |                                                 for (it2 = it1, ++it2; +it2 ; it2++)
      |                                                            ^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:305:68: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  305 |                                                         for (it3 = it2, ++it3; +it3 ; it3++)
      |                                                                    ^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/amberTorsion.C:362:117: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  362 |                                                                                         tmp.values = values.values[j];
      |                                                                                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |                         SingleValues(const SingleValues& v)
      |                         ^~~~~~~~~~~~
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function 'void BALL::GAFFTypeProcessor::annotateBondTypes_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  289 |                 BALL_FOREACH_BOND(*current_molecule_, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function 'void BALL::GAFFTypeProcessor::annotateBondTypes_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  289 |                 BALL_FOREACH_BOND(*current_molecule_, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  289 |                 BALL_FOREACH_BOND(*current_molecule_, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function 'void BALL::GAFFTypeProcessor::annotateBondTypes_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  289 |                 BALL_FOREACH_BOND(*current_molecule_, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C: In member function 'bool BALL::GAFFCESParser::APSMatcher::hasBond_(BALL::Atom*, BALL::Atom*, int, int)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:89:48: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   89 |                 for (bond_it = atom->beginBond(); +bond_it; ++bond_it)
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C: In member function 'bool BALL::GAFFCESParser::APSMatcher::hasBond_(BALL::Atom*, BALL::Atom*, int, int)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/AMBER/GAFFCESParser.C:89:48: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   89 |                 for (bond_it = atom->beginBond(); +bond_it; ++bond_it)
      |                                                ^
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserParser.C
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C:1996:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 1996 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmm.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmm.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:63: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |                                         values[i] = v.values[i];
      |                                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |                         SingleValues(const SingleValues& v)
      |                         ^~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmBend.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C: In member function 'virtual bool BALL::CharmmBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:83:58: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   83 |                         for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C: In member function 'virtual bool BALL::CharmmBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:83:58: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   83 |                         for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmBend.C:86:44: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   86 |                                 for (it1 = it2, ++it1; +it1 ; ++it1 )
      |                                            ^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C: In member function 'virtual bool BALL::CharmmImproperTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:173:75: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  173 |                                         for (atom_it = next_it->beginAtom(); +atom_it; ++atom_it)
      |                                                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C: In member function 'virtual bool BALL::CharmmImproperTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:173:75: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  173 |                                         for (atom_it = next_it->beginAtom(); +atom_it; ++atom_it)
      |                                                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:202:80: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  202 |                                         for (atom_it = last_residue->beginAtom(); +atom_it; ++atom_it)
      |                                                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:229:74: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  229 |                                         for (atom_it = res_it->beginAtom(); (cys_res != 0) && +atom_it; ++atom_it)
      |                                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmImproperTorsion.C:258:88: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |                                                 for (atom_it = last_residue->beginAtom(); +atom_it; ++atom_it)
      |                                                                                        ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C: In member function 'const BALL::CharmmNonBonded& BALL::CharmmNonBonded::operator=(const BALL::CharmmNonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:137:49: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  137 |                 ForceFieldComponent::operator = (charmm_non_bonded);
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:17: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |                 ForceFieldComponent(const ForceFieldComponent&  force_field_component);
      |                 ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:27: warning: implicitly-declared 'BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)' is deprecated [-Wdeprecated-copy]
   34 |         class BALL_EXPORT ForceFieldComponent : public ScoringComponent
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:26:25: note: because 'BALL::ScoringComponent' has user-provided 'BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)'
   26 |                         ScoringComponent(const ScoringComponent& sc);
      |                         ^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C: In member function 'const BALL::CharmmNonBonded& BALL::CharmmNonBonded::operator=(const BALL::CharmmNonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmNonBonded.C:137:49: note: synthesized method 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' first required here
  137 |                 ForceFieldComponent::operator = (charmm_non_bonded);
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C: In member function 'virtual bool BALL::CharmmStretch::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:71:68: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   71 |                         for (bond_iterator = (*atom_it)->beginBond(); +bond_iterator; ++bond_iterator)
      |                                                                    ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C: In member function 'virtual bool BALL::CharmmStretch::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmStretch.C:71:68: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   71 |                         for (bond_iterator = (*atom_it)->beginBond(); +bond_iterator; ++bond_iterator)
      |                                                                    ^
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:63: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |                                         values[i] = v.values[i];
      |                                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |                         SingleValues(const SingleValues& v)
      |                         ^~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:23:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C: In member function 'virtual bool BALL::CharmmTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:131:58: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  131 |                         for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C: In member function 'virtual bool BALL::CharmmTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:131:58: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  131 |                         for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:140:74: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  140 |                                         for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:155:119: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  155 |                                                         for (it3 = const_cast<Atom*>(it1->getSecondAtom())->beginBond(); +it3 ; ++it3)
      |                                                                                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:198:139: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  198 |                                                                                                         for (res_it = chain->beginResidue(); +res_it; last_res = &*res_it, ++res_it)
      |                                                                                                                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C: In member function 'virtual bool BALL::CharmmTorsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:198:139: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  198 |                                                                                                         for (res_it = chain->beginResidue(); +res_it; last_res = &*res_it, ++res_it)
      |                                                                                                                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/CHARMM/charmmTorsion.C:304:125: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  304 |                                                                                                 tmp.values = values.values[j];
      |                                                                                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |                         SingleValues(const SingleValues& v)
      |                         ^~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/assignTypes.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/assignTypes.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/atomTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/assignTypes.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/assignTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/atomVector.C
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/bendComponent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/bendComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/bendComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/chargeRuleProcessor.C
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C: In member function 'void BALL::ForceField::collectAtoms_(const BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceField.C:326:57: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  326 |                         for (atom_it = system.beginAtom(); +atom_it; ++atom_it)
      |                                                         ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C: In copy constructor 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/forceFieldComponent.C:34:9: warning: base class 'class BALL::ScoringComponent' should be explicitly initialized in the copy constructor [-Wextra]
   34 |         ForceFieldComponent::ForceFieldComponent(const ForceFieldComponent& force_field_component)
      |         ^~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/gradient.C
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/periodicBoundary.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:28,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/periodicBoundary.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = const BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = const BALL::Atom*; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
 1667 |                                 s << "    " << getIndex_(box_[i]) << std::endl;
      |                                                ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
 1625 |         void HashGrid3<Item>::dump(std::ostream& s, Size depth) const
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/radiusRuleProcessor.C
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/ruleEvaluator.C
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/ruleProcessor.C
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShot.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShot.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShot.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShotManager.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShotManager.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShot.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/snapShotManager.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/snapShotManager.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C: In function 'BALL::Size BALL::MolmecSupport::addNonOverlappingMolecules(BALL::System&, const BALL::HashGrid3<const BALL::Atom*>&, const BALL::System&, const BALL::SimpleBox3&, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:496:66: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  496 |                                 for (atom_it = mol_it->beginAtom(); +atom_it; ++atom_it)
      |                                                                  ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C: In function 'void BALL::MolmecSupport::adaptWaterBox(BALL::System&, const BALL::SimpleBox3&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:652:61: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  652 |                                 atom_it = mol_it->beginAtom();
      |                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C: In function 'void BALL::MolmecSupport::adaptWaterBox(BALL::System&, const BALL::SimpleBox3&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:652:61: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  652 |                                 atom_it = mol_it->beginAtom();
      |                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:701:74: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  701 |                                         for (atom_it = mol_it->beginAtom(); +atom_it; ++atom_it)
      |                                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:28:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::Atom*; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:234:22:   required from here
  234 |                                                 grid.getIndices(*box_it, x, y, z);
      |                                                 ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:450:36:   required from here
  450 |                                                 for (box_it = hbox->beginBox(); +box_it && add; ++box_it)
      |                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits& BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = const BALL::Atom*]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = const BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = const BALL::Atom*; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/support.C:503:29:   required from here
  503 |                                         solvent_grid.getIndices(*hbox, index_x, index_y, index_z);
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/stretchComponent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/stretchComponent.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/stretchComponent.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/typenameRuleProcessor.C
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/COMMON/typeRuleProcessor.C
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/energyMinimizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/energyMinimizer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/energyMinimizer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/lineSearch.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/lineSearch.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/lineSearch.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/steepestDescent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/steepestDescent.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/steepestDescent.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/strangLBFGS.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/strangLBFGS.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/strangLBFGS.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/shiftedLVMM.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/conjugateGradient.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/conjugateGradient.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MINIMIZATION/conjugateGradient.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/molecularDynamics.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/molecularDynamics.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/molecularDynamics.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/microCanonicalMD.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/microCanonicalMD.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/canonicalMD.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/canonicalMD.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MDSIMULATION/canonicalMD.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MDSIMULATION/canonicalMD.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/path.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C: In member function 'bool BALL::MMFF94StretchBend::setupBends_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:189:58: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  189 |                         for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C: In member function 'bool BALL::MMFF94StretchBend::setupBends_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:189:58: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  189 |                         for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94StretchBend.C:193:44: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  193 |                                 for (it1 = it2, ++it1; +it1 ; ++it1)
      |                                            ^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C: In member function 'virtual bool BALL::MMFF94Torsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:144:58: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  144 |                         for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                                          ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C: In member function 'virtual bool BALL::MMFF94Torsion::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:144:58: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  144 |                         for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:153:66: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  153 |                                 for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2)
      |                                                                  ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Torsion.C:163:69: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  163 |                                         for (it3 = atom3->beginBond(); +it3 ; ++it3)
      |                                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Parameters.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C: In member function 'virtual bool BALL::MMFF94OutOfPlaneBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:130:62: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  130 |                         for (bond_it = (*atom_it)->beginBond(); +bond_it; ++bond_it)
      |                                                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C: In member function 'virtual bool BALL::MMFF94OutOfPlaneBend::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:130:62: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  130 |                         for (bond_it = (*atom_it)->beginBond(); +bond_it; ++bond_it)
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:140:63: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  140 |                         for (bond_it = central_atom.beginBond(); +bond_it; ++bond_it)
      |                                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C: In member function 'virtual void BALL::MMFF94AtomTyper::assignTo(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:439:27: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  439 |         ait = s.beginAtom();
      |                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C: In member function 'virtual void BALL::MMFF94AtomTyper::assignTo(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94Processors.C:439:27: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  439 |         ait = s.beginAtom();
      |                           ^
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C: In member function 'const BALL::MMFF94NonBonded& BALL::MMFF94NonBonded::operator=(const BALL::MMFF94NonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:103:49: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  103 |                 ForceFieldComponent::operator = (anb);
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:17: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |                 ForceFieldComponent(const ForceFieldComponent&  force_field_component);
      |                 ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:27: warning: implicitly-declared 'BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)' is deprecated [-Wdeprecated-copy]
   34 |         class BALL_EXPORT ForceFieldComponent : public ScoringComponent
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:26:25: note: because 'BALL::ScoringComponent' has user-provided 'BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)'
   26 |                         ScoringComponent(const ScoringComponent& sc);
      |                         ^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C: In member function 'const BALL::MMFF94NonBonded& BALL::MMFF94NonBonded::operator=(const BALL::MMFF94NonBonded&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/MMFF94/MMFF94NonBonded.C:103:49: note: synthesized method 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' first required here
  103 |                 ForceFieldComponent::operator = (anb);
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/atomTypes.C
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/charmmEEF1.C
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/cosineTorsion.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/cosineTorsion.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function 'void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:63: warning: implicitly-declared 'BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)' is deprecated [-Wdeprecated-copy]
  105 |                                         values[i] = v.values[i];
      |                                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because 'BALL::CosineTorsion::SingleValues' has user-provided 'BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)'
   42 |                         SingleValues(const SingleValues& v)
      |                         ^~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/forceFieldParameters.C
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/lennardJones.C
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/potential1210.C
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/quadraticAngleBend.C
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/quadraticBondStretch.C
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/residueTorsions.C
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/templates.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/templates.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/MOLMEC/PARAMETER/templates.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/templates.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/anisotropyShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/anisotropyShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/anisotropyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/clearShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/clearShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/clearShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/EFShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/EFShiftProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/EFShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/empiricalHSShiftProcessor.h: In member function 'BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_& BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::operator=(const BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/empiricalHSShiftProcessor.h:282:23: warning: implicitly-declared 'BALL::CubicSpline2D& BALL::CubicSpline2D::operator=(const BALL::CubicSpline2D&)' is deprecated [-Wdeprecated-copy]
  282 |                 class ShiftHyperSurface_
      |                       ^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/empiricalHSShiftProcessor.h:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline2D.h:163:25: note: because 'BALL::CubicSpline2D' has user-provided 'BALL::CubicSpline2D::CubicSpline2D(const BALL::CubicSpline2D&)'
  163 |                         CubicSpline2D(const CubicSpline2D& cs2D);
      |                         ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C: In member function 'virtual void BALL::EmpiricalHSShiftProcessor::init()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:205:75: note: synthesized method 'BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_& BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::operator=(const BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_&)' first required here
  205 |                                         hypersurfaces_[atom_type][tuple]= shs;
      |                                                                           ^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C: In member function 'float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChiAngle_(BALL::Residue*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:475:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  475 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C: In member function 'float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChiAngle_(BALL::Residue*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:475:51: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  475 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:488:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  488 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:506:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  506 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:519:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  519 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:532:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  532 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:545:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  545 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C: In member function 'float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChi2Angle_(BALL::Residue*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:654:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  654 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:667:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  667 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:681:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  681 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:694:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  694 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:707:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  707 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:721:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  721 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:738:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  738 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:755:51: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  755 |                         r_it = residue->beginAtom();
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C: In constructor 'BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::ShiftHyperSurface_(BALL::String, BALL::String, BALL::String, BALL::String, int)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:1641:49: warning: implicitly-declared 'BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)' is deprecated [-Wdeprecated-copy]
 1641 |                         s1d_[first_property_] = s;
      |                                                 ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline2D.h:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline1D.h:124:25: note: because 'BALL::CubicSpline1D' has user-provided 'BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)'
  124 |                         CubicSpline1D(const CubicSpline1D& cs1D);
      |                         ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:1679:84: warning: implicitly-declared 'BALL::CubicSpline2D& BALL::CubicSpline2D::operator=(const BALL::CubicSpline2D&)' is deprecated [-Wdeprecated-copy]
 1679 |                                 s2d_ = CubicSpline2D(x_axis, y_axis, sample_values_);
      |                                                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline2D.h:163:25: note: because 'BALL::CubicSpline2D' has user-provided 'BALL::CubicSpline2D::CubicSpline2D(const BALL::CubicSpline2D&)'
  163 |                         CubicSpline2D(const CubicSpline2D& cs2D);
      |                         ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:1732:67: warning: implicitly-declared 'BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)' is deprecated [-Wdeprecated-copy]
 1732 |                                         s1d_[y_axis_values_[i]] = s;
      |                                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline1D.h:124:25: note: because 'BALL::CubicSpline1D' has user-provided 'BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)'
  124 |                         CubicSpline1D(const CubicSpline1D& cs1D);
      |                         ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/empiricalHSShiftProcessor.C:1760:67: warning: implicitly-declared 'BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)' is deprecated [-Wdeprecated-copy]
 1760 |                                         s1d_[y_axis_values_[i]] = s;
      |                                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/cubicSpline1D.h:124:25: note: because 'BALL::CubicSpline1D' has user-provided 'BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)'
  124 |                         CubicSpline1D(const CubicSpline1D& cs1D);
      |                         ^~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/experiment.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/experiment.C.o -MF CMakeFiles/BALL.dir/source/NMR/experiment.C.o.d -o CMakeFiles/BALL.dir/source/NMR/experiment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/experiment.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/experiment.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/experiment.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peakList.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/experiment.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/HBondShiftProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C: In member function 'virtual bool BALL::HBondShiftProcessor::finish()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:234:84: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  234 |                                                 for (bi = acceptors_[a]->beginBond(); +bi; ++bi)
      |                                                                                    ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C: In member function 'virtual bool BALL::HBondShiftProcessor::finish()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:234:84: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  234 |                                                 for (bi = acceptors_[a]->beginBond(); +bi; ++bi)
      |                                                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/HBondShiftProcessor.C:242:81: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  242 |                                                 for (bi = donors_[d]->beginBond(); +bi; ++bi)
      |                                                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/haighMallionShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/haighMallionShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/haighMallionShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/createSpectrumProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:35,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/createSpectrumProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/peak.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/createSpectrumProcessor.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/peak.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/peak.C.o -MF CMakeFiles/BALL.dir/source/NMR/peak.C.o.d -o CMakeFiles/BALL.dir/source/NMR/peak.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/peak.C
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/peakList.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/peakList.C.o -MF CMakeFiles/BALL.dir/source/NMR/peakList.C.o.d -o CMakeFiles/BALL.dir/source/NMR/peakList.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/peakList.C
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o -MF CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o.d -o CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModel.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModel.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o -MF CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o.d -o CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModule.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/shiftModule.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/spectrum.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/spectrum.C.o -MF CMakeFiles/BALL.dir/source/NMR/spectrum.C.o.d -o CMakeFiles/BALL.dir/source/NMR/spectrum.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/spectrum.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.h:335,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/spectrum.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In constructor 'BALL::Spectrum<DataT, PeakT, PositionT>::Spectrum(const std::vector<PeakT>&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData1D<float>; PeakT = BALL::Peak<float>; PositionT = float; PositionType = float]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:20:45: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
   20 |                 catch (Exception::OutOfGrid e)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In constructor 'BALL::Spectrum<DataT, PeakT, PositionT>::Spectrum(const std::vector<PeakT>&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData2D<float>; PeakT = BALL::Peak<BALL::TVector2<float> >; PositionT = BALL::TVector2<float>; PositionType = BALL::TVector2<float>]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:46:45: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
   46 |                 catch (Exception::OutOfGrid e)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::difference(const BALL::Spectrum<DataT, PeakT, PositionT>&) const [with DataT = BALL::TRegularData1D<float>; PeakT = BALL::Peak<float>; PositionT = float]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:135:53: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
  135 |                         catch (Exception::OutOfGrid e)
      |                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::difference(const BALL::Spectrum<DataT, PeakT, PositionT>&) const [with DataT = BALL::TRegularData2D<float>; PeakT = BALL::Peak<BALL::TVector2<float> >; PositionT = BALL::TVector2<float>]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:177:53: warning: catching polymorphic type 'class BALL::Exception::OutOfGrid' by value [-Wcatch-value=]
  177 |                         catch (Exception::OutOfGrid e)
      |                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::getFourierDifference(const BALL::Spectrum<DataT, PeakT, PositionT>&, float, float) [with DataT = BALL::TRegularData1D<float>; PeakT = BALL::Peak<float>; PositionT = float]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:752:101: warning: unused parameter 'other_spectrum' [-Wunused-parameter]
  752 | double Spectrum<RegularData1D, Peak1D>::getFourierDifference(const Spectrum<RegularData1D, Peak1D>& other_spectrum, float min_freq, float max_freq)
      |                                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:752:123: warning: unused parameter 'min_freq' [-Wunused-parameter]
  752 | double Spectrum<RegularData1D, Peak1D>::getFourierDifference(const Spectrum<RegularData1D, Peak1D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                     ~~~~~~^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:752:139: warning: unused parameter 'max_freq' [-Wunused-parameter]
  752 | double Spectrum<RegularData1D, Peak1D>::getFourierDifference(const Spectrum<RegularData1D, Peak1D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                                     ~~~~~~^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC: In member function 'double BALL::Spectrum<DataT, PeakT, PositionT>::getFourierDifference(const BALL::Spectrum<DataT, PeakT, PositionT>&, float, float) [with DataT = BALL::TRegularData2D<float>; PeakT = BALL::Peak<BALL::TVector2<float> >; PositionT = BALL::TVector2<float>]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:827:101: warning: unused parameter 'other_spectrum' [-Wunused-parameter]
  827 | double Spectrum<RegularData2D, Peak2D>::getFourierDifference(const Spectrum<RegularData2D, Peak2D>& other_spectrum, float min_freq, float max_freq)
      |                                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:827:123: warning: unused parameter 'min_freq' [-Wunused-parameter]
  827 | double Spectrum<RegularData2D, Peak2D>::getFourierDifference(const Spectrum<RegularData2D, Peak2D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                     ~~~~~~^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/spectrum.iC:827:139: warning: unused parameter 'max_freq' [-Wunused-parameter]
  827 | double Spectrum<RegularData2D, Peak2D>::getFourierDifference(const Spectrum<RegularData2D, Peak2D>& other_spectrum, float min_freq, float max_freq)
      |                                                                                                                                     ~~~~~~^~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/johnsonBoveyShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/johnsonBoveyShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/randomCoilShiftProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/shiftModule.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/NMR/randomCoilShiftProcessor.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/NMR/randomCoilShiftProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o -MF CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o.d -o CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/PLUGIN/BALLPlugin.C
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o -MF CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o.d -o CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/PLUGIN/pluginManager.C
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o -MF CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o.d -o CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/PLUGIN/pluginHandler.C
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o -MF CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C: In member function 'void BALL::AromaticityProcessor::aromatize(const std::vector<std::vector<BALL::Atom*> >&, BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:660:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  660 |                 BALL_FOREACH_BOND(ac, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C: In member function 'void BALL::AromaticityProcessor::aromatize(const std::vector<std::vector<BALL::Atom*> >&, BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:660:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  660 |                 BALL_FOREACH_BOND(ac, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:660:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  660 |                 BALL_FOREACH_BOND(ac, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C: In member function 'void BALL::AromaticityProcessor::aromatize(const std::vector<std::vector<BALL::Atom*> >&, BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:660:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  660 |                 BALL_FOREACH_BOND(ac, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C: In member function 'bool BALL::AromaticityProcessor::hasConjugatedDoubleBonds_(BALL::HashSet<BALL::Atom*>)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:956:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  956 |                                         bond_it = it;
      |                                                   ^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C: In member function 'BALL::Size BALL::AromaticityProcessor::countPiElectrons_(BALL::HashSet<BALL::Atom*>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:1008:64: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1008 |                                         for (j=(*i)->beginBond();j!=(*i)->endBond();++j)
      |                                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/aromaticityProcessor.C:1051:64: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1051 |                                         for (j=(*i)->beginBond();j!=(*i)->endBond();++j)
      |                                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o -MF CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/automaticModelCreator.h:2,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/featureSelection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C: In member function 'void BALL::QSAR::AutomaticModelCreator::optimizeParameters(BALL::QSAR::Model*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:35:46: warning: catching polymorphic type 'class BALL::QSAR::Exception::SingularMatrixError' by value [-Wcatch-value=]
   35 |         catch(Exception::SingularMatrixError e)
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C: In member function 'BALL::QSAR::Model* BALL::QSAR::AutomaticModelCreator::generateModel()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/automaticModelCreator.C:80:57: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
   80 |                 catch(BALL::Exception::GeneralException e)
      |                                                         ^
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/bayesModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/bayesModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: note:   by 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)'
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:18:35: note:   by 'BALL::QSAR::BayesModel::operator='
   18 |                 class BALL_EXPORT BayesModel : public ClassificationModel
      |                                   ^~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: note:   by 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)'
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o -MF CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationValidation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationValidation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/classificationValidation.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: note:   by 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)'
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/configIO.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/configIO.C.o -MF CMakeFiles/BALL.dir/source/QSAR/configIO.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/configIO.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/configIO.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/configIO.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o -MF CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C: In member function 'virtual void BALL::ConnectivityBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:109:45: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  109 |                 for (atom_it = ac.beginAtom(); atom_it != ac.endAtom(); ++atom_it)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:121:45: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  121 |                 for (atom_it = ac.beginAtom(); atom_it != ac.endAtom(); ++atom_it)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:135:40: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  135 |                 atom_it = ac.beginAtom();
      |                                        ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:136:46: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  136 |                 bond_it = atom_it->beginBond();
      |                                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C: In member function 'virtual void BALL::ConnectivityBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:136:46: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  136 |                 bond_it = atom_it->beginBond();
      |                                              ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:138:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  138 |                 BALL_FOREACH_BOND (ac, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:138:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  138 |                 BALL_FOREACH_BOND (ac, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C: In member function 'void BALL::ConnectivityBase::recursion_(std::vector<double>&, const BALL::Atom*, BALL::HashMap<const BALL::Atom*, unsigned int>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityBase.C:195:60: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  195 |                         for (bond_it = min_atom->beginBond(); bond_it != min_atom->endBond(); ++bond_it)
      |                                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o -MF CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C: In member function 'virtual double BALL::ZagrebIndex::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:50:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
   50 |                 BALL_FOREACH_ATOM (ac, atom_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:56:67: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   56 |                                 for (bond_it = atom_it->beginBond(); bond_it != atom_it->endBond(); bond_it++)
      |                                                                   ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C: In member function 'virtual double BALL::ZagrebIndex::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/connectivityDescriptors.C:56:67: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   56 |                                 for (bond_it = atom_it->beginBond(); bond_it != atom_it->endBond(); bond_it++)
      |                                                                   ^
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o -MF CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/descriptor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/descriptor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/exception.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/exception.C.o -MF CMakeFiles/BALL.dir/source/QSAR/exception.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/exception.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/exception.C
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kernel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/kernel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/kernel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/kernel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C: In member function 'virtual void BALL::QSAR::KernelModel::calculateOffsets()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:60:29: warning: unused variable 'no_act' [-Wunused-variable]
   60 |                         int no_act = training_result_.cols();
      |                             ^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C: In member function 'virtual void BALL::QSAR::KernelModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kernelModel.C:99:30: warning: variable 'sterr' set but not used [-Wunused-but-set-variable]
   99 |                         bool sterr = 0;
      |                              ^~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/latentVariableModel.C
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/linearModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/linearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
[ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/logitModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: note:   by 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)'
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/logitModel.h:19:35: note:   by 'BALL::QSAR::LogitModel& BALL::QSAR::LogitModel::operator=(BALL::QSAR::LogitModel&)'
   19 |                 class BALL_EXPORT LogitModel : public ClassificationModel
      |                                   ^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C: In member function 'virtual Eigen::VectorXd BALL::QSAR::LogitModel::predict(const std::vector<double>&, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/logitModel.C:90:52: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   90 |                         for (unsigned int i = 0; i < res.rows(); i++)
      |                                                  ~~^~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/Model.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/Model.C.o -MF CMakeFiles/BALL.dir/source/QSAR/Model.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/Model.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C: In member function 'void BALL::QSAR::Model::readDescriptorInformation()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:182:50: warning: variable 'y_transform' set but not used [-Wunused-but-set-variable]
  182 |                         bool transform = 0; bool y_transform = 0;
      |                                                  ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C: In member function 'Eigen::VectorXd BALL::QSAR::Model::getSubstanceVector(const Eigen::VectorXd&, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:316:72: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
  316 |                         if ( (data != NULL && data->getNoDescriptors() != substance.rows()) || (data == NULL && substance.rows() <= *(descriptor_IDs_.end()--)) )
      |                                               ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:316:130: warning: comparison of integer expressions of different signedness: 'Eigen::Index' {aka 'int'} and 'const unsigned int' [-Wsign-compare]
  316 |                         if ( (data != NULL && data->getNoDescriptors() != substance.rows()) || (data == NULL && substance.rows() <= *(descriptor_IDs_.end()--)) )
      |                                                                                                                 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C: In member function 'void BALL::QSAR::Model::readVector(Eigen::RowVectorXd&, std::ifstream&, unsigned int, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/Model.C:486:108: warning: unused parameter 'column_vector' [-Wunused-parameter]
  486 |                 void Model::readVector(Eigen::RowVectorXd & vec, ifstream& in, unsigned int no_cells, bool column_vector)
      |                                                                                                       ~~~~~^~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o -MF CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/modelFactory.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/modelFactory.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nBModel.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: note:   by 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)'
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:18:35: note:   by 'BALL::QSAR::BayesModel::operator='
   18 |                 class BALL_EXPORT BayesModel : public ClassificationModel
      |                                   ^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nBModel.h:27:35: note:   by 'BALL::QSAR::NBModel& BALL::QSAR::NBModel::operator=(BALL::QSAR::NBModel&)'
   27 |                 class BALL_EXPORT NBModel : public BayesModel
      |                                   ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C: In member function 'virtual void BALL::QSAR::NBModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nBModel.C:240:30: warning: variable 'centered_y' set but not used [-Wunused-but-set-variable]
  240 |                         bool centered_y = 0;
      |                              ^~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nonlinearModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/nonlinearModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o -MF CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C: In member function 'virtual void BALL::PartialChargeBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:108:40: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 |                 for (it = ac.beginAtom(); it != ac.endAtom(); ++it)
      |                                        ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C: In member function 'virtual void BALL::PartialChargeBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeBase.C:108:40: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 |                 for (it = ac.beginAtom(); it != ac.endAtom(); ++it)
      |                                        ^
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o -MF CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeDescriptors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/partialChargeDescriptors.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o -MF CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C: In member function 'void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:85:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   85 |                         atom_it = ac.beginAtom();
      |                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C: In member function 'void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:85:48: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   85 |                         atom_it = ac.beginAtom();
      |                                                ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:88:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   88 |                         BALL_FOREACH_BOND (ac, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:88:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   88 |                         BALL_FOREACH_BOND (ac, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C: In member function 'void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/partialChargeProcessor.C:88:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   88 |                         BALL_FOREACH_BOND (ac, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o -MF CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C: In member function 'void BALL::QSAR::QSARData::readSDFile(const char*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:77:67: warning: catching polymorphic type 'class BALL::Exception::ParseError' by value [-Wcatch-value=]
   77 |                                 catch(BALL::Exception::ParseError e)
      |                                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C: In member function 'void BALL::QSAR::QSARData::readSDFile(const char*, std::set<BALL::String>&, bool, bool, bool, bool, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:201:67: warning: catching polymorphic type 'class BALL::Exception::ParseError' by value [-Wcatch-value=]
  201 |                                 catch(BALL::Exception::ParseError e)
      |                                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:292:86: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  292 |                                                 catch(BALL::Exception::InvalidFormat g)
      |                                                                                      ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:313:94: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  313 |                                                         catch(BALL::Exception::InvalidFormat g)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:330:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<double> >::size_type' {aka 'unsigned int'} [-Wsign-compare]
  330 |                                 for(int p=no_internal_descriptors; p<descriptor_matrix_.size(); p++)
      |                                                                    ~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:332:72: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  332 |                                         if(descriptor_matrix_[p].size()<n+1)
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:343:51: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<double> >::size_type' {aka 'unsigned int'} [-Wsign-compare]
  343 |                                 for(int act=0; act<Y_.size(); act++)
      |                                                ~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:345:58: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  345 |                                         if(Y_[act].size()<n+1)
      |                                            ~~~~~~~~~~~~~~^~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C: In member function 'void BALL::QSAR::QSARData::readSDFile(const char*, std::multiset<int>&, bool, bool, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:399:67: warning: catching polymorphic type 'class BALL::Exception::ParseError' by value [-Wcatch-value=]
  399 |                                 catch(BALL::Exception::ParseError e)
      |                                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:460:94: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  460 |                                                         catch(BALL::Exception::InvalidFormat g)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:488:94: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  488 |                                                         catch(BALL::Exception::InvalidFormat g)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C: In member function 'void BALL::QSAR::QSARData::readCSVFile(const char*, int, bool, bool, const char*, bool, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:1097:86: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
 1097 |                                                 catch(BALL::Exception::InvalidFormat g)
      |                                                                                      ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:1119:94: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
 1119 |                                                         catch(BALL::Exception::InvalidFormat g)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C: In member function 'std::vector<BALL::QSAR::QSARData*> BALL::QSAR::QSARData::evenSplit(int, int, int) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:1354:54: warning: comparison of integer expressions of different signedness: 'BALL::Size' {aka 'unsigned int'} and 'int' [-Wsign-compare]
 1354 |                                 if (i%no_test_splits == current_test_split_id)
      |                                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algo.h:61,
                 from /usr/include/c++/14/algorithm:61,
                 from /usr/include/boost/move/algorithm.hpp:31,
                 from /usr/include/boost/move/move.hpp:32,
                 from /usr/include/boost/unordered/unordered_map.hpp:21,
                 from /usr/include/boost/unordered_map.hpp:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashMap.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/timeStamp.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:41:
/usr/include/c++/14/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1770 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/14/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1876 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1890 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
    inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<double*, vector<double> >]' at /usr/include/c++/14/bits/stl_algo.h:4772:18,
    inlined from 'void BALL::QSAR::QSARData::discretizeY(std::vector<double>)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:1192:8:
/usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1905 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1906 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1907 |                                 __comp);
      |                                 ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
    inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/14/bits/stl_algo.h:1908:31,
    inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<double*, vector<double> >]' at /usr/include/c++/14/bits/stl_algo.h:4772:18,
    inlined from 'void BALL::QSAR::QSARData::discretizeY(std::vector<double>)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/QSARData.C:1192:8:
/usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1817 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1822 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/registry.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/registry.C.o -MF CMakeFiles/BALL.dir/source/QSAR/registry.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/registry.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/modelFactory.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/registry.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: note:   by 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)'
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:25:35: note:   by 'BALL::QSAR::SVMModel& BALL::QSAR::SVMModel::operator=(BALL::QSAR::SVMModel&)'
   25 |                 class BALL_EXPORT SVMModel : public ClassificationModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/logitModel.h:19:35: note:   by 'BALL::QSAR::LogitModel& BALL::QSAR::LogitModel::operator=(BALL::QSAR::LogitModel&)'
   19 |                 class BALL_EXPORT LogitModel : public ClassificationModel
      |                                   ^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/snBModel.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:18:35: note:   by 'BALL::QSAR::BayesModel::operator='
   18 |                 class BALL_EXPORT BayesModel : public ClassificationModel
      |                                   ^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/snBModel.h:26:35: note:   by 'BALL::QSAR::SNBModel& BALL::QSAR::SNBModel::operator=(BALL::QSAR::SNBModel&)'
   26 |                 class BALL_EXPORT SNBModel : public BayesModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nBModel.h:27:35: note:   by 'BALL::QSAR::NBModel& BALL::QSAR::NBModel::operator=(BALL::QSAR::NBModel&)'
   27 |                 class BALL_EXPORT NBModel : public BayesModel
      |                                   ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:20:35: note:   by 'BALL::QSAR::ALLModel& BALL::QSAR::ALLModel::operator=(const BALL::QSAR::ALLModel&)'
   20 |                 class BALL_EXPORT ALLModel : public NonLinearModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:49:38: warning: 'virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   49 |                                 void operator=(const Model& m);
      |                                      ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/gpModel.h:21:35: note:   by 'BALL::QSAR::GPModel& BALL::QSAR::GPModel::operator=(const BALL::QSAR::GPModel&)'
   21 |                 class BALL_EXPORT GPModel : public KernelModel
      |                                   ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/knnModel.h:19:35: note:   by 'BALL::QSAR::KNNModel::operator='
   19 |                 class BALL_EXPORT KNNModel : public ALLModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:22:35: note:   by 'BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)'
   22 |                 class BALL_EXPORT MLRModel : public LinearModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:23:35: note:   by 'BALL::QSAR::RRModel& BALL::QSAR::RRModel::operator=(const BALL::QSAR::RRModel&)'
   23 |                 class BALL_EXPORT RRModel : public MLRModel
      |                                   ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:26:35: note:   by 'BALL::QSAR::PCRModel& BALL::QSAR::PCRModel::operator=(const BALL::QSAR::PCRModel&)'
   26 |                 class BALL_EXPORT PCRModel : public LinearModel, public LatentVariableModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:49:38: warning: 'virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   49 |                                 void operator=(const Model& m);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:26:35: note:   by 'BALL::QSAR::KPCRModel& BALL::QSAR::KPCRModel::operator=(const BALL::QSAR::KPCRModel&)'
   26 |                 class BALL_EXPORT KPCRModel : public KernelModel, public LatentVariableModel
      |                                   ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:49:38: warning: 'virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   49 |                                 void operator=(const Model& m);
      |                                      ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kplsModel.h:26:35: note:   by 'BALL::QSAR::KPLSModel& BALL::QSAR::KPLSModel::operator=(const BALL::QSAR::KPLSModel&)'
   26 |                 class BALL_EXPORT KPLSModel : public KernelModel, public LatentVariableModel
      |                                   ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ldaModel.h:21:35: note:   by 'BALL::QSAR::LDAModel& BALL::QSAR::LDAModel::operator=(BALL::QSAR::LDAModel&)'
   21 |                 class BALL_EXPORT LDAModel : public ClassificationModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/oplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/registry.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:28:35: note:   by 'BALL::QSAR::PLSModel& BALL::QSAR::PLSModel::operator=(const BALL::QSAR::PLSModel&)'
   28 |                 class BALL_EXPORT PLSModel : public LinearModel, public LatentVariableModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/oplsModel.h:19:35: note:   by 'BALL::QSAR::OPLSModel& BALL::QSAR::OPLSModel::operator=(const BALL::QSAR::OPLSModel&)'
   19 |                 class BALL_EXPORT OPLSModel : public PLSModel
      |                                   ^~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C: In member function 'void BALL::QSAR::RegressionModel::show()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:48:30: warning: variable 'sterr' set but not used [-Wunused-but-set-variable]
   48 |                         bool sterr = 0;
      |                              ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C: In member function 'virtual void BALL::QSAR::RegressionModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:129:30: warning: variable 'sterr' set but not used [-Wunused-but-set-variable]
  129 |                         bool sterr = 0;
      |                              ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C: In member function 'virtual void BALL::QSAR::RegressionModel::saveDescriptorInformationToFile(std::ofstream&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:259:73: warning: comparison of integer expressions of different signedness: 'Eigen::Index' {aka 'int'} and 'std::multiset<unsigned int>::size_type' {aka 'unsigned int'} [-Wsign-compare]
  259 |                                 bool trained = (training_result_.rows() == descriptor_IDs_.size());
      |                                                 ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionModel.C:285:73: warning: comparison of integer expressions of different signedness: 'Eigen::Index' {aka 'int'} and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'unsigned int'} [-Wsign-compare]
  285 |                                 bool trained = (training_result_.rows() == descriptor_names_.size());
      |                                                 ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o -MF CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionValidation.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C: In member function 'virtual void BALL::QSAR::RegressionValidation::testInputData(bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/regressionValidation.C:252:29: warning: variable 'col' set but not used [-Wunused-but-set-variable]
  252 |                         int col = model_->data->descriptor_matrix_.size();
      |                             ^~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o -MF CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C: In member function 'virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:59:9: note: in expansion of macro 'BALL_FOREACH_ATOM'
   59 |         BALL_FOREACH_ATOM(ac, a_it)
      |         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C: In member function 'virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:59:9: note: in expansion of macro 'BALL_FOREACH_ATOM'
   59 |         BALL_FOREACH_ATOM(ac, a_it)
      |         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:68:9: note: in expansion of macro 'BALL_FOREACH_BOND'
   68 |         BALL_FOREACH_BOND(ac, a_it, b_it)
      |         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:68:9: note: in expansion of macro 'BALL_FOREACH_BOND'
   68 |         BALL_FOREACH_BOND(ac, a_it, b_it)
      |         ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C: In member function 'virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:68:9: note: in expansion of macro 'BALL_FOREACH_BOND'
   68 |         BALL_FOREACH_BOND(ac, a_it, b_it)
      |         ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h: In instantiation of 'BALL::TSimpleMolecularGraph<Node, Edge>::TSimpleMolecularGraph(const BALL::Molecule&) [with Node = int; Edge = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ringPerceptionProcessor.C:89:37:   required from here
   89 |         SimpleMolecularGraph mol_graph(*mol);
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:228:46: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  228 |                 for (ai = molecule.beginAtom(); +ai; ++ai)
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/simpleMolecularGraph.h:230:49: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  230 |                         for (bi = ai->beginBond(); +bi; ++bi)
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o -MF CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C: In member function 'virtual void BALL::SimpleBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:269:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  269 |                 BALL_FOREACH_BOND (ac, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:269:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  269 |                 BALL_FOREACH_BOND (ac, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C: In member function 'virtual void BALL::SimpleBase::calculate_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleBase.C:269:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  269 |                 BALL_FOREACH_BOND (ac, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o -MF CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C: In member function 'virtual double BALL::NumberOfHydrophobicAtoms::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:677:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  677 |                         BALL_FOREACH_ATOM (ac, a_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C: In member function 'virtual double BALL::NumberOfHydrophobicAtoms::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:677:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  677 |                         BALL_FOREACH_ATOM (ac, a_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C: In member function 'virtual double BALL::NumberOfHydrogenBondDonors::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:746:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  746 |                         BALL_FOREACH_ATOM (ac, a_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C: In member function 'virtual double BALL::NumberOfHydrogenBondAcceptors::compute(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/simpleDescriptors.C:815:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  815 |                         BALL_FOREACH_ATOM (ac, a_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/snBModel.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: note:   by 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)'
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/bayesModel.h:18:35: note:   by 'BALL::QSAR::BayesModel::operator='
   18 |                 class BALL_EXPORT BayesModel : public ClassificationModel
      |                                   ^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/snBModel.h:26:35: note:   by 'BALL::QSAR::SNBModel& BALL::QSAR::SNBModel::operator=(BALL::QSAR::SNBModel&)'
   26 |                 class BALL_EXPORT SNBModel : public BayesModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C: In member function 'virtual void BALL::QSAR::SNBModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/snBModel.C:234:30: warning: variable 'centered_y' set but not used [-Wunused-but-set-variable]
  234 |                         bool centered_y = 0;
      |                              ^~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/statistics.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/statistics.C.o -MF CMakeFiles/BALL.dir/source/QSAR/statistics.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/statistics.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/statistics.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/statistics.C: In static member function 'static double BALL::QSAR::Statistics::calculateRankCorrelation(std::vector<double>&, std::vector<double>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/statistics.C:169:63: warning: comparison of integer expressions of different signedness: 'BALL::Size' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  169 |                                         for(Size i=position; i<end_current_score; i++)
      |                                                              ~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/statistics.C:189:63: warning: comparison of integer expressions of different signedness: 'BALL::Size' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  189 |                                         for(Size i=position; i<end_current_score; i++)
      |                                                              ~^~~~~~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/surfaceBase.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/surfaceBase.C.o -MF CMakeFiles/BALL.dir/source/QSAR/surfaceBase.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/surfaceBase.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceBase.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceBase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceBase.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o -MF CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceDescriptors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/descriptor.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceBase.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/surfaceDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/surfaceDescriptors.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svmModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svmModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: note:   by 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)'
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svmModel.h:25:35: note:   by 'BALL::QSAR::SVMModel& BALL::QSAR::SVMModel::operator=(BALL::QSAR::SVMModel&)'
   25 |                 class BALL_EXPORT SVMModel : public ClassificationModel
      |                                   ^~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svrModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/svrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:49:38: warning: 'virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   49 |                                 void operator=(const Model& m);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/svrModel.h:22:35: note:   by 'BALL::QSAR::SVRModel& BALL::QSAR::SVRModel::operator=(const BALL::QSAR::SVRModel&)'
   22 |                 class BALL_EXPORT SVRModel : public KernelModel
      |                                   ^~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/validation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/validation.C.o -MF CMakeFiles/BALL.dir/source/QSAR/validation.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/validation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/validation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/validation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/allModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/allModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/allModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/allModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:20:35: note:   by 'BALL::QSAR::ALLModel& BALL::QSAR::ALLModel::operator=(const BALL::QSAR::ALLModel&)'
   20 |                 class BALL_EXPORT ALLModel : public NonLinearModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C: In member function 'virtual void BALL::QSAR::ALLModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/allModel.C:202:30: warning: variable 'sterr' set but not used [-Wunused-but-set-variable]
  202 |                         bool sterr = 0;
      |                              ^~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o -MF CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/featureSelection.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/featureSelection.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C: In member function 'void BALL::QSAR::FeatureSelection::forward(bool, int, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:134:72: warning: catching polymorphic type 'class BALL::QSAR::Exception::NoPCAVariance' by value [-Wcatch-value=]
  134 |                                         catch(Exception::NoPCAVariance e)
      |                                                                        ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C: In member function 'void BALL::QSAR::FeatureSelection::backwardSelection(int, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:288:72: warning: catching polymorphic type 'class BALL::QSAR::Exception::NoPCAVariance' by value [-Wcatch-value=]
  288 |                                         catch(Exception::NoPCAVariance e)
      |                                                                        ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C: In member function 'void BALL::QSAR::FeatureSelection::twinScan(int, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:449:64: warning: catching polymorphic type 'class BALL::QSAR::Exception::NoPCAVariance' by value [-Wcatch-value=]
  449 |                                 catch(Exception::NoPCAVariance e)
      |                                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:456:87: warning: variable 'it' set but not used [-Wunused-but-set-variable]
  456 |                                 std::multiset< pair<double, unsigned int> >::iterator it = potential_descriptors.insert(make_pair(1-model_->model_val->getCVRes(), i));
      |                                                                                       ^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/featureSelection.C:485:64: warning: catching polymorphic type 'class BALL::QSAR::Exception::NoPCAVariance' by value [-Wcatch-value=]
  485 |                                 catch(Exception::NoPCAVariance e)
      |                                                                ^
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/gpModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:49:38: warning: 'virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   49 |                                 void operator=(const Model& m);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/gpModel.h:21:35: note:   by 'BALL::QSAR::GPModel& BALL::QSAR::GPModel::operator=(const BALL::QSAR::GPModel&)'
   21 |                 class BALL_EXPORT GPModel : public KernelModel
      |                                   ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C: In member function 'virtual double BALL::QSAR::GPModel::calculateStdErr()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:88:52: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   88 |                         for (unsigned int i = 1; i <= K_t_.cols(); i++)
      |                                                  ~~^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/gpModel.C:90:60: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   90 |                                 for (unsigned int j = 1; j <= K_t_.cols(); j++)
      |                                                          ~~^~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/knnModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/knnModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/knnModel.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/allModel.h:20:35: note:   by 'BALL::QSAR::ALLModel& BALL::QSAR::ALLModel::operator=(const BALL::QSAR::ALLModel&)'
   20 |                 class BALL_EXPORT ALLModel : public NonLinearModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/knnModel.h:19:35: note:   by 'BALL::QSAR::KNNModel::operator='
   19 |                 class BALL_EXPORT KNNModel : public ALLModel
      |                                   ^~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kpcrModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kpcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:22:35: note:   by 'BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)'
   22 |                 class BALL_EXPORT MLRModel : public LinearModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:23:35: note:   by 'BALL::QSAR::RRModel& BALL::QSAR::RRModel::operator=(const BALL::QSAR::RRModel&)'
   23 |                 class BALL_EXPORT RRModel : public MLRModel
      |                                   ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:26:35: note:   by 'BALL::QSAR::PCRModel& BALL::QSAR::PCRModel::operator=(const BALL::QSAR::PCRModel&)'
   26 |                 class BALL_EXPORT PCRModel : public LinearModel, public LatentVariableModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:49:38: warning: 'virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   49 |                                 void operator=(const Model& m);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kpcrModel.h:26:35: note:   by 'BALL::QSAR::KPCRModel& BALL::QSAR::KPCRModel::operator=(const BALL::QSAR::KPCRModel&)'
   26 |                 class BALL_EXPORT KPCRModel : public KernelModel, public LatentVariableModel
      |                                   ^~~~~~~~~
[ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kplsModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:49:38: warning: 'virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   49 |                                 void operator=(const Model& m);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kplsModel.h:26:35: note:   by 'BALL::QSAR::KPLSModel& BALL::QSAR::KPLSModel::operator=(const BALL::QSAR::KPLSModel&)'
   26 |                 class BALL_EXPORT KPLSModel : public KernelModel, public LatentVariableModel
      |                                   ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/kplsModel.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:22:35: note:   by 'BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)'
   22 |                 class BALL_EXPORT MLRModel : public LinearModel
      |                                   ^~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ldaModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: note:   by 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)'
   39 |                                 virtual void operator=(ClassificationModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/classificationModel.h:39:46: warning: 'virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)' was hidden [-Woverloaded-virtual=]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ldaModel.h:21:35: note:   by 'BALL::QSAR::LDAModel& BALL::QSAR::LDAModel::operator=(BALL::QSAR::LDAModel&)'
   21 |                 class BALL_EXPORT LDAModel : public ClassificationModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C: In member function 'virtual Eigen::VectorXd BALL::QSAR::LDAModel::predict(const std::vector<double>&, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:123:68: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
  123 |                                         for (unsigned int i = 0; i < s.rows(); i++)
      |                                                                  ~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C: In member function 'virtual void BALL::QSAR::LDAModel::saveToFile(std::string)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/ldaModel.C:169:30: warning: variable 'centered_y' set but not used [-Wunused-but-set-variable]
  169 |                         bool centered_y = 0;
      |                              ^~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:22:35: note:   by 'BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)'
   22 |                 class BALL_EXPORT MLRModel : public LinearModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C: In member function 'virtual void BALL::QSAR::MLRModel::train()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/mlrModel.C:48:65: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
   48 |                         catch(BALL::Exception::GeneralException e)
      |                                                                 ^
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/oplsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:28:35: note:   by 'BALL::QSAR::PLSModel& BALL::QSAR::PLSModel::operator=(const BALL::QSAR::PLSModel&)'
   28 |                 class BALL_EXPORT PLSModel : public LinearModel, public LatentVariableModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/oplsModel.h:19:35: note:   by 'BALL::QSAR::OPLSModel& BALL::QSAR::OPLSModel::operator=(const BALL::QSAR::OPLSModel&)'
   19 |                 class BALL_EXPORT OPLSModel : public PLSModel
      |                                   ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C: In member function 'virtual void BALL::QSAR::OPLSModel::train()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/oplsModel.C:43:52: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   43 |                         for (unsigned int i = 1; i <= u.rows(); i++)
      |                                                  ~~^~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:22:35: note:   by 'BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)'
   22 |                 class BALL_EXPORT MLRModel : public LinearModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:23:35: note:   by 'BALL::QSAR::RRModel& BALL::QSAR::RRModel::operator=(const BALL::QSAR::RRModel&)'
   23 |                 class BALL_EXPORT RRModel : public MLRModel
      |                                   ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/pcrModel.h:26:35: note:   by 'BALL::QSAR::PCRModel& BALL::QSAR::PCRModel::operator=(const BALL::QSAR::PCRModel&)'
   26 |                 class BALL_EXPORT PCRModel : public LinearModel, public LatentVariableModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C: In static member function 'static void BALL::QSAR::PCRModel::calculateEigenvectors(const Eigen::MatrixXd&, double, Eigen::MatrixXd&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:46:44: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   46 |                         for (; last_vector < svd.singularValues().rows() && cols < data.rows() && explained_var/complete_var < frac_var ; last_vector++)
      |                                ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:46:82: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   46 |                         for (; last_vector < svd.singularValues().rows() && cols < data.rows() && explained_var/complete_var < frac_var ; last_vector++)
      |                                                                             ~~~~~^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/pcrModel.C:55:52: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
   55 |                         for (unsigned int i = 0; i < data.rows(); i++)
      |                                                  ~~^~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:28:35: note:   by 'BALL::QSAR::PLSModel& BALL::QSAR::PLSModel::operator=(const BALL::QSAR::PLSModel&)'
   28 |                 class BALL_EXPORT PLSModel : public LinearModel, public LatentVariableModel
      |                                   ^~~~~~~~
In file included from /usr/include/eigen3/Eigen/SVD:36,
                 from /usr/include/eigen3/Eigen/Dense:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C:8:
/usr/include/eigen3/Eigen/src/SVD/SVDBase.h: In function 'void Eigen::SVDBase<MatrixType>::_solve_impl(const RhsType&, DstType&) const [with RhsType = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >; DstType = Eigen::Matrix<double, -1, -1, 1, -1, -1>; Derived = Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2>]':
/usr/include/eigen3/Eigen/src/SVD/SVDBase.h:308:6: note: parameter passing for argument of type 'const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >' changed in GCC 7.1
  308 | void SVDBase<Derived>::_solve_impl(const RhsType &rhs, DstType &dst) const
      |      ^~~~~~~~~~~~~~~~
In file included from /usr/include/eigen3/Eigen/Core:323,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/statistics.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:32:
In constructor 'Eigen::internal::evaluator<Eigen::Solve<Decomposition, RhsType> >::evaluator(const SolveType&) [with Decomposition = Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >; RhsType = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >]',
    inlined from 'Eigen::internal::evaluator<const T>::evaluator(const T&) [with T = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:104:54,
    inlined from 'Eigen::internal::unary_evaluator<Eigen::Block<ArgType, BlockRows, BlockCols, InnerPanel>, Eigen::internal::IndexBased>::unary_evaluator(const XprType&) [with ArgType = const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1106:7,
    inlined from 'Eigen::internal::block_evaluator<ArgType, BlockRows, BlockCols, InnerPanel, false>::block_evaluator(const XprType&) [with ArgType = const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1094:37,
    inlined from 'Eigen::internal::evaluator<Eigen::Block<ArgType, BlockRows, BlockCols, InnerPanel> >::evaluator(const XprType&) [with ArgType = const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1079:72,
    inlined from 'Eigen::internal::evaluator<const T>::evaluator(const T&) [with T = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:104:54,
    inlined from 'Eigen::internal::unary_evaluator<Eigen::Block<ArgType, BlockRows, BlockCols, InnerPanel>, Eigen::internal::IndexBased>::unary_evaluator(const XprType&) [with ArgType = const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1106:7,
    inlined from 'Eigen::internal::block_evaluator<ArgType, BlockRows, BlockCols, InnerPanel, false>::block_evaluator(const XprType&) [with ArgType = const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1094:37,
    inlined from 'Eigen::internal::evaluator<Eigen::Block<ArgType, BlockRows, BlockCols, InnerPanel> >::evaluator(const XprType&) [with ArgType = const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1079:72,
    inlined from 'Eigen::internal::evaluator<const T>::evaluator(const T&) [with T = Eigen::Block<const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>, -1, 1, true>]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:104:54,
    inlined from 'Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>, Eigen::internal::IndexBased, Eigen::internal::IndexBased>::Data::Data(const Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>, Eigen::internal::IndexBased, Eigen::internal::IndexBased>::XprType&) [with BinaryOp = Eigen::internal::scalar_conj_product_op<double, double>; Lhs = const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >; Rhs = const Eigen::Block<const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>, -1, 1, true>]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:800:71,
    inlined from 'Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>, Eigen::internal::IndexBased, Eigen::internal::IndexBased>::binary_evaluator(const XprType&) [with BinaryOp = Eigen::internal::scalar_conj_product_op<double, double>; Lhs = const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >; Rhs = const Eigen::Block<const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>, -1, 1, true>]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:758:51,
    inlined from 'Eigen::internal::evaluator<Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::evaluator(const XprType&) [with BinaryOp = Eigen::internal::scalar_conj_product_op<double, double>; Lhs = const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >; Rhs = const Eigen::Block<const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>, -1, 1, true>]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:729:52,
    inlined from 'Eigen::internal::redux_evaluator<_XprType>::redux_evaluator(const XprType&) [with _XprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>, -1, 1, true> >]' at /usr/include/eigen3/Eigen/src/Core/Redux.h:363:58,
    inlined from 'typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>, -1, 1, true> >]' at /usr/include/eigen3/Eigen/src/Core/Redux.h:414:17,
    inlined from 'typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> >, const Eigen::Block<const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>, -1, 1, true> >]' at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25,
    inlined from 'static Eigen::internal::dot_nocheck<T, U, true>::ResScalar Eigen::internal::dot_nocheck<T, U, true>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>; U = Eigen::Block<const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>, -1, 1, true>]' at /usr/include/eigen3/Eigen/src/Core/Dot.h:50:63,
    inlined from 'typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Block<const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>, -1, 1, true>; Derived = Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>]' at /usr/include/eigen3/Eigen/src/Core/Dot.h:84:58,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:380:62,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:376:53,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24:
/usr/include/eigen3/Eigen/src/Core/Solve.h:127:28: note: parameter passing for argument of type 'const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >' changed in GCC 7.1
  127 |     solve.dec()._solve_impl(solve.rhs(), m_result);
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In constructor 'Eigen::internal::evaluator<Eigen::Solve<Decomposition, RhsType> >::evaluator(const SolveType&) [with Decomposition = Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >; RhsType = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >]',
    inlined from 'Eigen::internal::evaluator<const T>::evaluator(const T&) [with T = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:104:54,
    inlined from 'Eigen::internal::unary_evaluator<Eigen::Block<ArgType, BlockRows, BlockCols, InnerPanel>, Eigen::internal::IndexBased>::unary_evaluator(const XprType&) [with ArgType = const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1106:7,
    inlined from 'Eigen::internal::block_evaluator<ArgType, BlockRows, BlockCols, InnerPanel, false>::block_evaluator(const XprType&) [with ArgType = const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1094:37,
    inlined from 'Eigen::internal::evaluator<Eigen::Block<ArgType, BlockRows, BlockCols, InnerPanel> >::evaluator(const XprType&) [with ArgType = const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1079:72,
    inlined from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, 1>; SrcXprType = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; Functor = assign_op<double, double>]' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:774:20,
    inlined from 'static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, 1>; SrcXprType = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:954:31,
    inlined from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; Func = assign_op<double, double>]' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49,
    inlined from 'Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; Derived = Eigen::Matrix<double, -1, 1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:797:41,
    inlined from 'void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; OtherDerived = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; Derived = Eigen::Matrix<double, -1, 1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:883:25,
    inlined from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' at /usr/include/eigen3/Eigen/src/Core/Matrix.h:332:31,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:384:15,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24:
/usr/include/eigen3/Eigen/src/Core/Solve.h:127:28: note: parameter passing for argument of type 'const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >' changed in GCC 7.1
  127 |     solve.dec()._solve_impl(solve.rhs(), m_result);
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In constructor 'Eigen::internal::evaluator<Eigen::Solve<Decomposition, RhsType> >::evaluator(const SolveType&) [with Decomposition = Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >; RhsType = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >]',
    inlined from 'Eigen::internal::evaluator<const T>::evaluator(const T&) [with T = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:104:54,
    inlined from 'Eigen::internal::unary_evaluator<Eigen::Block<ArgType, BlockRows, BlockCols, InnerPanel>, Eigen::internal::IndexBased>::unary_evaluator(const XprType&) [with ArgType = const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1106:7,
    inlined from 'Eigen::internal::block_evaluator<ArgType, BlockRows, BlockCols, InnerPanel, false>::block_evaluator(const XprType&) [with ArgType = const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1094:37,
    inlined from 'Eigen::internal::evaluator<Eigen::Block<ArgType, BlockRows, BlockCols, InnerPanel> >::evaluator(const XprType&) [with ArgType = const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1079:72,
    inlined from 'Eigen::internal::evaluator<const T>::evaluator(const T&) [with T = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:104:54,
    inlined from 'Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>, Eigen::internal::IndexBased, Eigen::internal::IndexBased>::Data::Data(const Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>, Eigen::internal::IndexBased, Eigen::internal::IndexBased>::XprType&) [with BinaryOp = Eigen::internal::scalar_conj_product_op<double, double>; Lhs = const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, true> >; Rhs = const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:800:71,
    inlined from 'Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>, Eigen::internal::IndexBased, Eigen::internal::IndexBased>::binary_evaluator(const XprType&) [with BinaryOp = Eigen::internal::scalar_conj_product_op<double, double>; Lhs = const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, true> >; Rhs = const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:758:51,
    inlined from 'Eigen::internal::evaluator<Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs> >::evaluator(const XprType&) [with BinaryOp = Eigen::internal::scalar_conj_product_op<double, double>; Lhs = const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, true> >; Rhs = const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>]' at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:729:52,
    inlined from 'Eigen::internal::redux_evaluator<_XprType>::redux_evaluator(const XprType&) [with _XprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, true> >, const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false> >]' at /usr/include/eigen3/Eigen/src/Core/Redux.h:363:58,
    inlined from 'typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, true> >, const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false> >]' at /usr/include/eigen3/Eigen/src/Core/Redux.h:414:17,
    inlined from 'typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, true> >, const Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false> >]' at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25,
    inlined from 'static Eigen::internal::dot_nocheck<T, U, true>::ResScalar Eigen::internal::dot_nocheck<T, U, true>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, true>; U = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>]' at /usr/include/eigen3/Eigen/src/Core/Dot.h:50:63,
    inlined from 'typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Block<const Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, -1, 1, false>; Derived = Eigen::Block<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, true>]' at /usr/include/eigen3/Eigen/src/Core/Dot.h:84:58,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Lhs = const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:380:62,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Lhs = const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:376:53,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24:
/usr/include/eigen3/Eigen/src/Core/Solve.h:127:28: note: parameter passing for argument of type 'const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >' changed in GCC 7.1
  127 |     solve.dec()._solve_impl(solve.rhs(), m_result);
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In static member function 'static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1, 1, -1, -1>; DecType = Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >; RhsType = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >; Scalar = double]',
    inlined from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1, 1, -1, -1>; Src = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49,
    inlined from 'Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1, 1, -1, -1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:797:41,
    inlined from 'void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; OtherDerived = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1, 1, -1, -1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:883:25,
    inlined from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' at /usr/include/eigen3/Eigen/src/Core/Matrix.h:332:31,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Lhs = const Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:384:15,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24:
/usr/include/eigen3/Eigen/src/Core/Solve.h:147:26: note: parameter passing for argument of type 'const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >' changed in GCC 7.1
  147 |     src.dec()._solve_impl(src.rhs(), dst);
      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In static member function 'static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1, 1, -1, -1>; DecType = Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >; RhsType = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >; Scalar = double]',
    inlined from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1, 1, -1, -1>; Src = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49,
    inlined from 'Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1, 1, -1, -1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:797:41,
    inlined from 'Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1, 1, -1, -1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:594:19,
    inlined from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' at /usr/include/eigen3/Eigen/src/Core/Matrix.h:423:29,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:490:69:
/usr/include/eigen3/Eigen/src/Core/Solve.h:147:26: note: parameter passing for argument of type 'const Eigen::Transpose<Eigen::Matrix<double, -1, -1> >' changed in GCC 7.1
  147 |     src.dec()._solve_impl(src.rhs(), dst);
      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In static member function 'static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1, 1, -1, -1>; DecType = Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >; RhsType = Eigen::Transpose<Eigen::Matrix<double, -1, -1> >; Scalar = double]',
    inlined from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1, 1, -1, -1>; Src = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; Func = assign_op<double, double>]' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49,
    inlined from 'Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1, 1, -1, -1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:797:41,
    inlined from 'void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; OtherDerived = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1, 1, -1, -1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:883:25,
    inlined from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' at /usr/include/eigen3/Eigen/src/Core/Matrix.h:332:31,
    inlined from 'Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int ProductTag = 8]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:501:7,
    inlined from 'Eigen::internal::evaluator<Eigen::Product<Lhs, Rhs, Option> >::evaluator(const XprType&) [with Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int Options = 1]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:35:90,
    inlined from 'void Eigen::internal::call_restricted_packet_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, 1>; Func = assign_op<double, double>]' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:904:22,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 3>::eval_dynamic_impl(Dst&, const LhsT&, const RhsT&, const Func&, const Scalar&, Eigen::internal::false_type) [with Dst = Eigen::Matrix<double, -1, -1>; LhsT = Eigen::Matrix<double, -1, -1>; RhsT = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; Func = Eigen::internal::assign_op<double, double>; Scalar = double; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:462:47,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 3>::eval_dynamic(Dst&, const Lhs&, const Rhs&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Func = Eigen::internal::assign_op<double, double>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:446:22,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:441:32,
    inlined from 'static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >]' at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:432:15,
    inlined from 'static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >; int Options = 0; Scalar = double]' at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:148:43,
    inlined from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, 0>; Func = assign_op<double, double>]' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49,
    inlined from 'Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:797:41,
    inlined from 'void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, 0>; OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:883:25,
    inlined from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' at /usr/include/eigen3/Eigen/src/Core/Matrix.h:332:31,
    inlined from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<evaluator_assume_aliasing<Src>::value, void*>::type) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, 0>; Func = assign_op<double, double>]' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:850:41,
    inlined from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, 0>]' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:836:18,
    inlined from 'Derived& Eigen::PlainObjectBase<Derived>::_set(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:779:32,
    inlined from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, -1, -1>, Eigen::Solve<Eigen::SVDBase<Eigen::JacobiSVD<Eigen::Matrix<double, -1, -1>, 2> >, Eigen::Transpose<Eigen::Matrix<double, -1, -1> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' at /usr/include/eigen3/Eigen/src/Core/Matrix.h:225:24,
    inlined from 'virtual void BALL::QSAR::PLSModel::train()' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/plsModel.C:107:138:
/usr/include/eigen3/Eigen/src/Core/Solve.h:147:26: note: parameter passing for argument of type 'Eigen::Transpose<Eigen::Matrix<double, -1, -1> >' changed in GCC 7.1
  147 |     src.dec()._solve_impl(src.rhs(), dst);
      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/validation.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/mlrModel.h:22:35: note:   by 'BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)'
   22 |                 class BALL_EXPORT MLRModel : public LinearModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/rrModel.h:23:35: note:   by 'BALL::QSAR::RRModel& BALL::QSAR::RRModel::operator=(const BALL::QSAR::RRModel&)'
   23 |                 class BALL_EXPORT RRModel : public MLRModel
      |                                   ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C: In member function 'virtual void BALL::QSAR::RRModel::train()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/QSAR/rrModel.C:70:65: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
   70 |                         catch(BALL::Exception::GeneralException e)
      |                                                                 ^
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/baseFunction.C
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffScoringFunction.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffScoringFunction.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffGridBasedScoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/diffGridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/vector:72,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/logStream.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:36,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9:
/usr/include/c++/14/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  700 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/vector:66:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void BALL::GridBasedScoring::GridSetsResult::setup(BALL::Size)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C:874:23:
/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1037 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void BALL::GridBasedScoring::GridSetsResult::setup(BALL::Size)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/gridBasedScoring.C:875:21:
/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1037 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/linearBaseFunction.C
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/fermiBaseFunction.C
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/dockResultFile.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/rescorer.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/molFileFactory.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:61:46: warning: 'virtual void BALL::Rescoring::generateScoreContributions_(BALL::Molecule*, std::vector<std::vector<double> >*, std::vector<double>*)' was hidden [-Woverloaded-virtual=]
   61 |                                 virtual void generateScoreContributions_(Molecule* /*mol*/, vector<vector<double> >* /*matrix*/, vector<double>* /*v*/) {};
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:21:30: note:   by 'void BALL::Rescoring1D::generateScoreContributions_(std::vector<std::vector<double> >*, std::vector<double>*)'
   21 |                         void generateScoreContributions_(vector<vector<double> >* matrix, vector<double>* v);
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C: In static member function 'static void BALL::Rescorer::processMultiMoleculeFile(BALL::ScoringFunction*, BALL::StructurePreparer*, BALL::String, BALL::Rescoring*, bool, double, BALL::String, BALL::GenericMolFile*, BALL::GenericMolFile*, double, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/rescorer.C:390:66: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  390 |                         catch (BALL::Exception::GeneralException e)
      |                                                                  ^
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoreGridSet.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoreGridSet.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoreGridSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoreGridSet.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
 1667 |                                 s << "    " << getIndex_(box_[i]) << std::endl;
      |                                                ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
 1625 |         void HashGrid3<Item>::dump(std::ostream& s, Size depth) const
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringComponent.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringComponent.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringFunction.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringFunction.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
 1667 |                                 s << "    " << getIndex_(box_[i]) << std::endl;
      |                                                ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
 1625 |         void HashGrid3<Item>::dump(std::ostream& s, Size depth) const
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C: In member function 'void BALL::ScoringOptimizer::evaluate(double*, double*, double*, BALL::Size*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMMON/scoringOptimizer.C:187:57: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  187 |                 catch(BALL::Exception::GeneralException e)
      |                                                         ^
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/aromaticRingStacking.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/aromaticityProcessor.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/aromaticRingStacking.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/advElectrostatic.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/advElectrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fragmentationalSolvation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
 1667 |                                 s << "    " << getIndex_(box_[i]) << std::endl;
      |                                                ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
 1625 |         void HashGrid3<Item>::dump(std::ostream& s, Size depth) const
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/burialDepth.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/burialDepth.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/burialDepth.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/buriedPolar.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/buriedPolar.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPI.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPI.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPISlick.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceField.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/CHPISlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/support.h:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/electrostatic.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/electrostatic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/electrostatic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C: In member function 'virtual bool BALL::FresnoTypes::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:310:41: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  310 |                                         BALL_FOREACH_ATOM_BOND(*atom, bond_it)
      |                                         ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C: In member function 'virtual bool BALL::FresnoTypes::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:310:41: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  310 |                                         BALL_FOREACH_ATOM_BOND(*atom, bond_it)
      |                                         ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/fresnoTypes.C:365:49: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  365 |                                                 BALL_FOREACH_ATOM_BOND(*atom, bond_it)
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBond.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C: In member function 'virtual bool BALL::HydrogenBondSlick::setup()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:147:70: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  147 |                                         for (lig_it = lig->beginAtom(); +lig_it; ++lig_it)
      |                                                                      ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:173:46: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  173 |                 for (lig_it = lig->beginAtom(); +lig_it; ++lig_it)
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/hydrogenBondSlick.C:179:70: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  179 |                                         for (rec_it = rec->beginAtom(); +rec_it; ++rec_it)
      |                                                                      ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/lipophilic.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/lipophilic.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/lipophilic.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarity.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::Atom*; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarity.C:167:23:   required from here
  167 |                 hashgrid->getIndices(*box, pos_x, pos_y, pos_z);
      |                 ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PB.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PB.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PB.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/PLP.h:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C: In member function 'const BALL::PLP& BALL::PLP::operator=(const BALL::PLP&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:147:41: warning: implicitly-declared 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' is deprecated [-Wdeprecated-copy]
  147 |         ForceFieldComponent::operator = (anb);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:17: note: because 'BALL::ForceFieldComponent' has user-provided 'BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)'
   61 |                 ForceFieldComponent(const ForceFieldComponent&  force_field_component);
      |                 ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:27: warning: implicitly-declared 'BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)' is deprecated [-Wdeprecated-copy]
   34 |         class BALL_EXPORT ForceFieldComponent : public ScoringComponent
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:26:25: note: because 'BALL::ScoringComponent' has user-provided 'BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)'
   26 |                         ScoringComponent(const ScoringComponent& sc);
      |                         ^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C: In member function 'const BALL::PLP& BALL::PLP::operator=(const BALL::PLP&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/PLP.C:147:41: note: synthesized method 'BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)' first required here
  147 |         ForceFieldComponent::operator = (anb);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/rotationalEntropy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/rotationalEntropy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/solvation.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/set:62,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:8:
/usr/include/c++/14/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<BALL::String&&>, std::tuple<>}; _Key = BALL::String; _Val = std::pair<const BALL::String, double>; _KeyOfValue = std::_Select1st<std::pair<const BALL::String, double> >; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]':
/usr/include/c++/14/bits/stl_tree.h:2454:7: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
 2454 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/map:63,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:38,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/paramFile.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:11:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:20:26:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:21:26:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:22:26:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:23:26:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:24:26:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:25:27:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:26:27:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:27:27:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:28:27:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:29:27:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:30:27:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:31:27:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:32:26:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:33:26:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:34:27:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:35:26:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:37:23:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:38:23:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:39:23:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:40:23:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:41:23:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:42:24:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:43:24:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:44:24:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:45:24:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:46:24:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:47:24:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:48:24:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:49:23:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:50:23:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:51:24:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less<BALL::String>; _Alloc = std::allocator<std::pair<const BALL::String, double> >]',
    inlined from 'BALL::Solvation::Solvation(BALL::ScoringFunction&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/solvation.C:52:23:
/usr/include/c++/14/bits/stl_map.h:532:44: note: parameter passing for argument of type 'std::_Rb_tree<BALL::String, std::pair<const BALL::String, double>, std::_Select1st<std::pair<const BALL::String, double> >, std::less<BALL::String>, std::allocator<std::pair<const BALL::String, double> > >::const_iterator' changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C: In member function 'virtual double BALL::NonpolarSolvation::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:406:68: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  406 |                 src = getScoringFunction()->getLigand()->beginAtom();
      |                                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:407:41: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  407 |                 dst = ligand_.beginAtom();
      |                                         ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C: In member function 'virtual double BALL::NonpolarSolvation::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/nonpolarSolvation.C:407:41: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  407 |                 dst = ligand_.beginAtom();
      |                                         ^
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C: In member function 'virtual double BALL::PolarSolvation::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:261:68: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  261 |                 src = getScoringFunction()->getLigand()->beginAtom();
      |                                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:262:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 dst = desolv_ligand_.beginAtom();
      |                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C: In member function 'virtual double BALL::PolarSolvation::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:262:48: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  262 |                 dst = desolv_ligand_.beginAtom();
      |                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:457:72: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  457 |                                         it = desolv_protein_.beginAtom();
      |                                                                        ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C: In member function 'bool BALL::PolarSolvation::computeFullCycle_(BALL::System&, BALL::Molecule&, BALL::Molecule&, float&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:768:44: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  768 |                 for (it = ligand.beginAtom(); +it; ++it)
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:795:45: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  795 |                 for (it = protein.beginAtom(); +it; ++it)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:832:44: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  832 |                 for (it = ligand.beginAtom(); +it; ++it)
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:851:44: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  851 |                 for (it = ligand.beginAtom(); +it; ++it)
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:874:45: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  874 |                 for (it = protein.beginAtom(); +it; ++it)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/polarSolvation.C:905:39: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  905 |                 it = system.beginAtom();
      |                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaals.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/moleculeIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaals.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/parameterSection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringComponent.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C: In member function 'virtual double BALL::VanDerWaalsSlick::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:658:68: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  658 |                 src = getScoringFunction()->getLigand()->beginAtom();
      |                                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:659:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  659 |                 dst = vdw_ligand_->beginAtom();
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C: In member function 'virtual double BALL::VanDerWaalsSlick::updateScore()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:659:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  659 |                 dst = vdw_ligand_->beginAtom();
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:683:47: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  683 |                 it = vdw_receptor_->beginAtom();
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:697:45: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  697 |                 it = vdw_ligand_->beginAtom();
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/featureSelection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/nonlinearModel.h:19:35: note:   by 'BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)'
   19 |                 class BALL_EXPORT NonLinearModel : public RegressionModel
      |                                   ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: note:   by 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)'
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: warning: 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)' was hidden [-Woverloaded-virtual=]
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:27:35: note:   by 'BALL::QSAR::KernelModel::operator='
   27 |                 class BALL_EXPORT KernelModel : public NonLinearModel
      |                                   ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/linearModel.h:30:46: warning: 'virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)' was hidden [-Woverloaded-virtual=]
   30 |                                 virtual void operator=(const LinearModel& m);
      |                                              ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/plsModel.h:28:35: note:   by 'BALL::QSAR::PLSModel& BALL::QSAR::PLSModel::operator=(const BALL::QSAR::PLSModel&)'
   28 |                 class BALL_EXPORT PLSModel : public LinearModel, public LatentVariableModel
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kernelModel.h:49:38: warning: 'virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   49 |                                 void operator=(const Model& m);
      |                                      ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/kplsModel.h:26:35: note:   by 'BALL::QSAR::KPLSModel& BALL::QSAR::KPLSModel::operator=(const BALL::QSAR::KPLSModel&)'
   26 |                 class BALL_EXPORT KPLSModel : public KernelModel, public LatentVariableModel
      |                                   ^~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring1D.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring1D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:61:46: warning: 'virtual void BALL::Rescoring::generateScoreContributions_(BALL::Molecule*, std::vector<std::vector<double> >*, std::vector<double>*)' was hidden [-Woverloaded-virtual=]
   61 |                                 virtual void generateScoreContributions_(Molecule* /*mol*/, vector<vector<double> >* /*matrix*/, vector<double>* /*v*/) {};
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:21:30: note:   by 'void BALL::Rescoring1D::generateScoreContributions_(std::vector<std::vector<double> >*, std::vector<double>*)'
   21 |                         void generateScoreContributions_(vector<vector<double> >* matrix, vector<double>* v);
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C: In member function 'std::__cxx11::list<std::pair<BALL::String, BALL::TRegularData3D<float>*> > BALL::Rescoring3D::generateRegularData3DGrids()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:112:30: warning: comparison of integer expressions of different signedness: 'BALL::Size' {aka 'unsigned int'} and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
  112 |     if (sizeX_*sizeY_*sizeZ_ < coefficients->rows())
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
 1667 |                                 s << "    " << getIndex_(box_[i]) << std::endl;
      |                                                ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
 1625 |         void HashGrid3<Item>::dump(std::ostream& s, Size depth) const
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
In file included from /usr/include/c++/14/vector:72,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/logStream.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:36,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9:
/usr/include/c++/14/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  700 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/vector:66:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector<double>&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:39:29,
    inlined from 'virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector<double>&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:35:6:
/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1037 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector<double>&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:42:56:
/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1037 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector<double>&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:39:29,
    inlined from 'virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector<double>&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:35:6,
    inlined from 'virtual void BALL::Rescoring3D::generateScoreContributions_(BALL::Molecule*, std::vector<std::vector<double> >*, std::vector<double>*)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:81:48:
/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1037 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector<double>&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:39:29,
    inlined from 'virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector<double>&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:35:6,
    inlined from 'virtual void BALL::Rescoring3D::generateScoreContributions_(BALL::Molecule*, std::vector<std::vector<double> >*, std::vector<double>*)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:86:52:
/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1037 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector<double>&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:42:56,
    inlined from 'virtual void BALL::Rescoring3D::generateScoreContributions_(BALL::Molecule*, std::vector<std::vector<double> >*, std::vector<double>*)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring3D.C:86:52:
/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1037 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:24,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/QSARData.h:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:48:30: note:   by 'BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)'
   48 |                 ZagrebIndex& operator = (const ZagrebIndex& zi);
      |                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityBase.h:59:43: warning: 'virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)' was hidden [-Woverloaded-virtual=]
   59 |                 virtual ConnectivityBase& operator = (const ConnectivityBase& cb);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/connectivityDescriptors.h:93:32: note:   by 'BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)'
   93 |                 BalabanIndexJ& operator = (const BalabanIndexJ& bij);
      |                                ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/rescoring.h:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:48:46: warning: 'virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)' was hidden [-Woverloaded-virtual=]
   48 |                                 virtual void operator=(const Model& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:34:46: note:   by 'virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)'
   34 |                                 virtual void operator=(const RegressionModel& m);
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/Model.h:195:46: warning: 'virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)' was hidden [-Woverloaded-virtual=]
  195 |                                 virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation);
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/regressionModel.h:79:38: note:   by 'void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)'
   79 |                                 void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/vector:72,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/logStream.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:36,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9:
/usr/include/c++/14/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/14/bits/vector.tcc:700:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  700 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/vector:66:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'virtual void BALL::Rescoring4D::generateAtomScoreContributions_(const BALL::Atom*, std::vector<double>&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C:32:25:
/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1037 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'virtual void BALL::Rescoring4D::generateAtomScoreContributions_(const BALL::Atom*, std::vector<double>&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/rescoring4D.C:35:55:
/usr/include/c++/14/bits/stl_vector.h:1037:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1037 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/amberEvaluation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/amberEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/energeticEvaluation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/energeticEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/forceFieldEvaluation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedMM.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedMM.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/MMScoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffScoringFunction.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/MMScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/gridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/gridedPLP.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PLPScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/randomEvaluation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/randomEvaluation.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PBScoring.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/PBScoring.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickEnergy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickEnergy.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickScore.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/slickScore.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SCORING/FUNCTIONS/slickScore.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/claverieParameter.C
[ 68%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C: In member function 'float BALL::ElectrostaticPotentialCalculator::operator()(const BALL::Vector3&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:64:52: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 |                         for (atIt=mySys_.beginAtom();+atIt;++atIt)
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C: In member function 'float BALL::ElectrostaticPotentialCalculator::operator()(const BALL::Vector3&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:64:52: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 |                         for (atIt=mySys_.beginAtom();+atIt;++atIt)
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/electrostaticPotentialCalculator.C:83:52: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   83 |                         for (atIt=mySys_.beginAtom();+atIt;++atIt)
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/generalizedBornCase.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C: In member function 'bool BALL::GeneralizedBornModel::setup(const BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/generalizedBornCase.C:235:43: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  235 |                 for (it1 = ac_->beginAtom(); +it1; ++it1)
      |                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/molecularSurfaceGrid.h:19,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/molecularSurfaceGrid.h:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C: In function 'BALL::TRegularData3D<char>* BALL::calculateSESGrid(const Vector3&, const Vector3&, float, const System&, float)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:165:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
  165 |                 BALL_FOREACH_ATOM(system, atom_iterator)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C: In function 'BALL::TRegularData3D<char>* BALL::calculateSASGrid(const Vector3&, const Vector3&, float, const System&, float)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/molecularSurfaceGrid.C:358:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
  358 |                 BALL_FOREACH_ATOM(system, atom_iterator)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionPredicate.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionTree.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expressionParser.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/expression.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/ooiEnergy.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C: In function 'double BALL::calculateOoiEnergy(AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:277:48: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  277 |                 for (atom_it = atoms.beginAtom(); +atom_it; ++atom_it)
      |                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C: In function 'double BALL::calculateOoiEnergy(AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/ooiEnergy.C:277:48: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  277 |                 for (atom_it = atoms.beginAtom(); +atom_it; ++atom_it)
      |                                                ^
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/PCMCavFreeEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pierottiCavFreeEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C: In member function 'virtual bool BALL::Pair6_12InteractionEnergyProcessor::finish()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:406:69: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  406 |                         for (solute_iterator = fragment_->beginAtom(); +solute_iterator;
      |                                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pair6_12RDFIntegrator.C
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/surface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C: In member function 'virtual bool BALL::PairExpInteractionEnergyProcessor::finish()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpInteractionEnergyProcessor.C:315:69: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  315 |                         for (solute_iterator = fragment_->beginAtom(); +solute_iterator;
      |                                                                     ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/pairExpRDFIntegrator.C
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C: In member function 'bool BALL::FDPB::setupAtomArray(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:267:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
  267 |                 BALL_FOREACH_ATOM(system, atom_iterator)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C: In member function 'bool BALL::FDPB::setupAtomArray(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:267:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
  267 |                 BALL_FOREACH_ATOM(system, atom_iterator)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
  237 |                         ConstForwardIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:571:35:   required from here
  571 |                                                 for (box_it = box->beginBox(); +box_it; ++box_it)
      |                                                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits& BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits::operator=(const BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = BALL::TVector4<float>]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::TVector4<float>; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TVector4<float>; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TVector4<float>; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::TVector4<float>]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector4<float> >; DataType = BALL::HashGridBox3<BALL::TVector4<float> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::TVector4<float>; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::TVector4<float> >, BALL::HashGridBox3<BALL::TVector4<float> >, unsigned int, BALL::HashGridBox3<BALL::TVector4<float> >::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/poissonBoltzmann.C:571:34:   required from here
  571 |                                                 for (box_it = box->beginBox(); +box_it; ++box_it)
      |                                                               ~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/reissCavFreeEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/reissCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/solventDescriptor.C
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/solventParameter.C
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/uhligCavFreeEnergyProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/ENERGY/energyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function 'bool BALL::BondOrderAssignment::apply()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   64 |                         BALL_FOREACH_BOND(*ac, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function 'bool BALL::BondOrderAssignment::apply()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   64 |                         BALL_FOREACH_BOND(*ac, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   64 |                         BALL_FOREACH_BOND(*ac, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function 'bool BALL::BondOrderAssignment::apply()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:25: note: in expansion of macro 'BALL_FOREACH_BOND'
   64 |                         BALL_FOREACH_BOND(*ac, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:87:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   87 |                         a_it = ac->beginAtom();
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:88:48: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   88 |                         b_it = a_it->beginBond();
      |                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:89:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
   89 |                         BALL_FOREACH_ATOM(*ac, a_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'virtual bool BALL::FPTBondOrderStrategy::readOptions(const BALL::Options&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:30:63: warning: unused parameter 'options' [-Wunused-parameter]
   30 |         bool FPTBondOrderStrategy::readOptions(const Options& options)
      |                                                ~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'virtual void BALL::FPTBondOrderStrategy::init()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:69:27: warning: unused variable 'result' [-Wunused-variable]
   69 |                   Penalty result = bond_assignments[i]->compute();
      |                           ^~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'virtual boost::shared_ptr<BALL::BondOrderAssignment> BALL::FPTBondOrderStrategy::computeNextSolution()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  104 |                         BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'virtual boost::shared_ptr<BALL::BondOrderAssignment> BALL::FPTBondOrderStrategy::computeNextSolution()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  104 |                         BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  104 |                         BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'virtual boost::shared_ptr<BALL::BondOrderAssignment> BALL::FPTBondOrderStrategy::computeNextSolution()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  104 |                         BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'void BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_::computeJoinBag(BALL::FPTBondOrderStrategy::TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&, BALL::FPTBondOrderStrategy::DPTable_&, BALL::FPTBondOrderStrategy::AdditionalBagProperties_&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:853:60: warning: implicitly-declared 'BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)' is deprecated [-Wdeprecated-copy]
  853 |                                 DPConfig_ config = *match->first;
      |                                                            ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:42: note: because 'BALL::FPTBondOrderStrategy::DPConfig_' has user-provided 'BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)'
  245 |         FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy)
      |                                          ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In copy constructor 'BALL::FPTBondOrderStrategy::BackTrackingState_::BackTrackingState_(const BALL::FPTBondOrderStrategy::BackTrackingState_&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1211:19: warning: implicitly-declared 'BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)' is deprecated [-Wdeprecated-copy]
 1211 |                   config(other.config),
      |                   ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:42: note: because 'BALL::FPTBondOrderStrategy::DPConfig_' has user-provided 'BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)'
  245 |         FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy)
      |                                          ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'void BALL::FPTBondOrderStrategy::DPBackTracking_::visitIntroduce(BALL::FPTBondOrderStrategy::BackTrackingState_&, TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1525:55: warning: implicitly-declared 'BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)' is deprecated [-Wdeprecated-copy]
 1525 |                 DPConfig_ antecessor = table.begin()->first;
      |                                                       ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:42: note: because 'BALL::FPTBondOrderStrategy::DPConfig_' has user-provided 'BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)'
  245 |         FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy)
      |                                          ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function 'void BALL::FPTBondOrderStrategy::DPBackTracking_::visitForget(BALL::FPTBondOrderStrategy::BackTrackingState_&, TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1722:40: warning: implicitly-declared 'BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)' is deprecated [-Wdeprecated-copy]
 1722 |                 DPConfig_ test_entry = successor;
      |                                        ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:42: note: because 'BALL::FPTBondOrderStrategy::DPConfig_' has user-provided 'BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)'
  245 |         FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy)
      |                                          ^~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C: In member function 'bool BALL::PartialBondOrderAssignment::estimatePenalty_(bool, HEURISTIC_INDEX)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:226:53: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  226 |                         for (b_it = a_it->beginBond(); +b_it; b_it++)
      |                                                     ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C: In member function 'bool BALL::PartialBondOrderAssignment::estimatePenalty_(bool, HEURISTIC_INDEX)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:226:53: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  226 |                         for (b_it = a_it->beginBond(); +b_it; b_it++)
      |                                                     ^
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/processor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/addHydrogenProcessor.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/addHydrogenProcessor.C:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/analyticalSES.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/analyticalSES.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/analyticalSES.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'virtual BALL::Processor::Result BALL::AssignBondOrderProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:594:93: warning: comparison of integer expressions of different signedness: 'BALL::Size' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  594 |                                                         && ((getNumberOfComputedSolutions() < max_number_of_solutions_) || (!max_number_of_solutions_))
      |                                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'bool BALL::AssignBondOrderProcessor::readAtomPenalties_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:667:43: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
  667 |                 for (unsigned int i= 0; i < entries.length(); i++)
      |                                         ~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:705:68: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
  705 |                                         for (unsigned int k = 0; k < penalties.length(); k++)
      |                                                                  ~~^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:28:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:774:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  774 |                         BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:774:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  774 |                         BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:774:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  774 |                         BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:774:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  774 |                         BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:799:38: warning: variable 'min_order' set but not used [-Wunused-but-set-variable]
  799 |                                 Size min_order = 0;
      |                                      ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'void BALL::AssignBondOrderProcessor::storeOriginalConfiguration_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:1187:17: note: in expansion of macro 'BALL_FOREACH_BOND'
 1187 |                 BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:1187:17: note: in expansion of macro 'BALL_FOREACH_BOND'
 1187 |                 BALL_FOREACH_BOND(*ac_, a_it, b_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C: In member function 'float BALL::AssignBondOrderProcessor::evaluatePenalty(BALL::AtomContainer*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:1449:33: note: in expansion of macro 'BALL_FOREACH_BOND'
 1449 |                                 BALL_FOREACH_BOND(*ac, a_it, b_it)
      |                                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/assignBondOrderProcessor.C:1449:33: note: in expansion of macro 'BALL_FOREACH_BOND'
 1449 |                                 BALL_FOREACH_BOND(*ac, a_it, b_it)
      |                                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomBijection.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomBijection.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomTyper.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomTyper.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/atomTyper.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/binaryFingerprintMethods.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/binaryFingerprintMethods.C: In static member function 'static bool BALL::BinaryFingerprintMethods::parseBinaryFingerprint(const BALL::String&, std::vector<short unsigned int>&, unsigned int, const char*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/binaryFingerprintMethods.C:293:57: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  293 |                         catch (Exception::InvalidFormat e)
      |                                                         ^
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C: In member function 'virtual BALL::Processor::Result BALL::BindingPocketProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:239:43: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  239 |                         ai = s->beginAtom();
      |                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C: In member function 'virtual BALL::Processor::Result BALL::BindingPocketProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:239:43: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  239 |                         ai = s->beginAtom();
      |                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:245:43: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  245 |                         ai = s->beginAtom();
      |                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:251:43: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  251 |                         ai = s->beginAtom();
      |                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/bindingPocketProcessor.h:21:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::BindingPocketProcessor::Sphere_; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::BindingPocketProcessor::Sphere_; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/bindingPocketProcessor.C:398:24:   required from here
  398 |                                 pw_grid_.getIndices(*box_it,x_pos,y_pos,z_pos);
      |                                 ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/buildBondsProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'virtual BALL::Processor::Result BALL::BuildBondsProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:90:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
   90 |                         BALL_FOREACH_ATOM(ac, ait)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'virtual BALL::Processor::Result BALL::BuildBondsProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:90:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
   90 |                         BALL_FOREACH_ATOM(ac, ait)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'BALL::Size BALL::BuildBondsProcessor::buildBondsHashGrid3_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   90 | for (first_atom_iterator = (atom_container).beginAtom(); \
      |                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:129:25: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
  129 |                         BALL_FOREACH_ATOM_PAIR(ac, ait1, ait2)
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   92 |   for (second_atom_iterator = (atom_container).beginAtom(); \
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:129:25: note: in expansion of macro 'BALL_FOREACH_ATOM_PAIR'
  129 |                         BALL_FOREACH_ATOM_PAIR(ac, ait1, ait2)
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'void BALL::BuildBondsProcessor::estimateBondOrders_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:258:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  258 |                 BALL_FOREACH_BOND(ac, ait, bit)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:258:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  258 |                 BALL_FOREACH_BOND(ac, ait, bit)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'void BALL::BuildBondsProcessor::estimateBondOrders_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:258:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  258 |                 BALL_FOREACH_BOND(ac, ait, bit)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C: In member function 'void BALL::BuildBondsProcessor::deleteOverestimatedBonds_(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:333:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
  333 |                 BALL_FOREACH_ATOM(ac, ait)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::Atom*; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/buildBondsProcessor.C:165:19:   required from here
  165 |                         grid.getIndices(*box_it, x, y, z);
      |                         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C: In member function 'virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:50:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
   50 |                 BALL_FOREACH_ATOM(ac, atom_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C: In member function 'virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:50:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
   50 |                 BALL_FOREACH_ATOM(ac, atom_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  141 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:66:17: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
   66 |                 BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:66:17: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
   66 |                 BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C: In member function 'virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:143:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  143 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connectedComponentsProcessor.C:66:17: note: in expansion of macro 'BALL_FOREACH_INTRABOND'
   66 |                 BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/connolly.C
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/defaultProcessors.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/defaultProcessors.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/defaultProcessors.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/defaultProcessors.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/disulfidBondProcessor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:43:17: note: in expansion of macro 'BALL_FOREACH_BOND'
   43 |                 BALL_FOREACH_BOND(ac, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:43:17: note: in expansion of macro 'BALL_FOREACH_BOND'
   43 |                 BALL_FOREACH_BOND(ac, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:43:17: note: in expansion of macro 'BALL_FOREACH_BOND'
   43 |                 BALL_FOREACH_BOND(ac, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:43:17: note: in expansion of macro 'BALL_FOREACH_BOND'
   43 |                 BALL_FOREACH_BOND(ac, atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'bool BALL::DisulfidBondProcessor::connect(BALL::Atom*, BALL::Atom*, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:121:66: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  121 |                                         b_it  = atom2->beginBond();
      |                                                                  ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'bool BALL::DisulfidBondProcessor::connect(BALL::Residue*, BALL::Residue*, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:194:52: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  194 |                         a_it = residue2->beginAtom();
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C: In member function 'bool BALL::DisulfidBondProcessor::disconnect(BALL::Residue*, BALL::Residue*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/disulfidBondProcessor.C:338:60: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  338 |                                 a_it = residue2->beginAtom();
      |                                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/DNAMutator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/DNAMutator.C:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/DNAMutator.h:12,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/DNAMutator.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'void BALL::FragmentDB::parseBonds_(BALL::ResourceEntry&, BALL::Fragment&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:306:67: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  306 |                                 for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it)
      |                                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'void BALL::FragmentDB::parseBonds_(BALL::ResourceEntry&, BALL::Fragment&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:306:67: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  306 |                                 for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it)
      |                                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'void BALL::FragmentDB::parseDelete_(BALL::ResourceEntry&, BALL::Fragment&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:385:67: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  385 |                                 for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it)
      |                                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'void BALL::FragmentDB::parseRename_(BALL::ResourceEntry&, BALL::Fragment&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:423:67: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  423 |                                 for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it)
      |                                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'void BALL::FragmentDB::NormalizeNamesProcessor::countHits_(BALL::HashMap<BALL::StringHashMap<BALL::String>*, int>&, const BALL::Fragment*, CountingMode)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:1239:56: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1239 |                         for (atom_it = frag->beginAtom(); +atom_it; ++atom_it)
      |                                                        ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'BALL::Size BALL::FragmentDB::BuildBondsProcessor::buildFragmentBonds(BALL::Fragment&, const BALL::Fragment&) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:1483:70: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
 1483 |                         for (tplate_bond_it = tplate_atom->beginBond(); +tplate_bond_it; ++tplate_bond_it)
      |                                                                      ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C: In member function 'BALL::Size BALL::FragmentDB::BuildBondsProcessor::buildFragmentBonds(BALL::Fragment&, const BALL::Fragment&) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/fragmentDB.C:1483:70: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
 1483 |                         for (tplate_bond_it = tplate_atom->beginBond(); +tplate_bond_it; ++tplate_bond_it)
      |                                                                      ^
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C: In member function 'virtual bool BALL::FragmentDistanceCollector::finish()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:199:74: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  199 |                 for (composite_it = reference_composite_->beginComposite();
      |                                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:223:71: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  223 |                         for (atom_iterator2 = mol_fragment->beginAtom(); +atom_iterator2; ++ atom_iterator2)
      |                                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricProperties.C:238:87: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  238 |                                         for (atom_iterator2 = mol_fragment->beginAtom();
      |                                                                                       ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/geometricTransformations.C
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/graphEdge.C
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/graphFace.C
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/graphVertex.C
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:101:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  101 |                         ri = s->beginResidue();
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:101:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' first required here
  101 |                         ri = s->beginResidue();
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:107:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  107 |                         ri = s->beginResidue();
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:113:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  113 |                         ri = s->beginResidue();
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Residue, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::ResidueIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::ResidueIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:129:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  129 |                         BALL_FOREACH_BOND(*ri_del, ai, bi)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:129:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  129 |                         BALL_FOREACH_BOND(*ri_del, ai, bi)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:129:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  129 |                         BALL_FOREACH_BOND(*ri_del, ai, bi)
      |                         ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:129:25: note: in expansion of macro 'BALL_FOREACH_BOND'
  129 |                         BALL_FOREACH_BOND(*ri_del, ai, bi)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C: In member function 'bool BALL::HBondProcessor::finishWishartEtAl_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:525:76: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  525 |                                         for (bi = acceptors_[a]->beginBond(); +bi; ++bi)
      |                                                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:533:73: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  533 |                                         for (bi = donors_[d]->beginBond(); +bi; ++bi)
      |                                                                         ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::HBondProcessor::ResidueData*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::HBondProcessor::ResidueData*; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::HBondProcessor::ResidueData*; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::HBondProcessor::ResidueData*]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; DataType = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; DataType = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; DataType = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; DataType = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::HBondProcessor::ResidueData*; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>, BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>, unsigned int, BALL::HashGridBox3<BALL::HBondProcessor::ResidueData*>::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/HBondProcessor.C:350:67:   required from here
  350 |                         for(HashGridBox3<ResidueData*>::BoxIterator bit = box->beginBox(); +bit; ++bit)
      |                                                                           ~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/hybridisationProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C: In member function 'double BALL::HybridisationProcessor::AverageBondAngle_(BALL::Atom*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:112:43: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  112 |                 for (b_it1 = a->beginBond(); +b_it1; ++b_it1)
      |                                           ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C: In member function 'double BALL::HybridisationProcessor::AverageBondAngle_(BALL::Atom*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:112:43: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  112 |                 for (b_it1 = a->beginBond(); +b_it1; ++b_it1)
      |                                           ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:114:33: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  114 |                         b_it2 = b_it1;
      |                                 ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HybridisationProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:147:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  147 |                         BALL_FOREACH_ATOM(ac, ait)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C: In member function 'virtual BALL::Processor::Result BALL::HybridisationProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:147:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  147 |                         BALL_FOREACH_ATOM(ac, ait)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:217:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  217 |                         for (ait = ac.beginAtom(); +ait; ++ait)
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:365:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  365 |                         for (ait = ac.beginAtom(); +ait; ++ait)
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:371:68: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  371 |                                         for (b_it = ait->beginBond(); +b_it; ++b_it)
      |                                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:410:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  410 |                         BALL_FOREACH_ATOM(ac, ait)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/hybridisationProcessor.C:418:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  418 |                         BALL_FOREACH_ATOM(ac, ait)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::setup(BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:197:9: note: in expansion of macro 'BALL_FOREACH_BOND'
  197 |         BALL_FOREACH_BOND(mol, ait, bit)
      |         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::setup(BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:197:9: note: in expansion of macro 'BALL_FOREACH_BOND'
  197 |         BALL_FOREACH_BOND(mol, ait, bit)
      |         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:197:9: note: in expansion of macro 'BALL_FOREACH_BOND'
  197 |         BALL_FOREACH_BOND(mol, ait, bit)
      |         ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::setup(BALL::Molecule&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:197:9: note: in expansion of macro 'BALL_FOREACH_BOND'
  197 |         BALL_FOREACH_BOND(mol, ait, bit)
      |         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::fixAromaticRings_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:374:46: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  374 |                         bit = atom.beginBond();
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'void BALL::Kekuliser::collectAromaticAtoms_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:587:9: note: in expansion of macro 'BALL_FOREACH_ATOM'
  587 |         BALL_FOREACH_ATOM(*molecule_, ait)
      |         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:5:
In copy constructor 'BALL::Kekuliser::AtomInfo::AtomInfo(const BALL::Kekuliser::AtomInfo&)',
    inlined from 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]' at /usr/include/c++/14/bits/new_allocator.h:191:4,
    inlined from 'static void std::allocator_traits<std::allocator<_CharT> >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]' at /usr/include/c++/14/bits/alloc_traits.h:575:17,
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::Kekuliser::AtomInfo; _Alloc = std::allocator<BALL::Kekuliser::AtomInfo>]' at /usr/include/c++/14/bits/stl_vector.h:1288:30,
    inlined from 'bool BALL::Kekuliser::fixAromaticRings_()' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:350:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/kekulizer.h:40:36: warning: 'temp_ai.BALL::Kekuliser::AtomInfo::atom' may be used uninitialized [-Wmaybe-uninitialized]
   40 |                 struct BALL_EXPORT AtomInfo
      |                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::fixAromaticRings_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:283:18: note: 'temp_ai' declared here
  283 |         AtomInfo temp_ai;
      |                  ^~~~~~~
In copy constructor 'BALL::Kekuliser::AtomInfo::AtomInfo(const BALL::Kekuliser::AtomInfo&)',
    inlined from 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]' at /usr/include/c++/14/bits/new_allocator.h:191:4,
    inlined from 'static void std::allocator_traits<std::allocator<_CharT> >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]' at /usr/include/c++/14/bits/alloc_traits.h:575:17,
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::Kekuliser::AtomInfo; _Alloc = std::allocator<BALL::Kekuliser::AtomInfo>]' at /usr/include/c++/14/bits/stl_vector.h:1288:30,
    inlined from 'bool BALL::Kekuliser::fixAromaticRings_()' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:350:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/kekulizer.h:40:36: warning: 'temp_ai.BALL::Kekuliser::AtomInfo::min_double' may be used uninitialized [-Wmaybe-uninitialized]
   40 |                 struct BALL_EXPORT AtomInfo
      |                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::fixAromaticRings_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:283:18: note: 'temp_ai' declared here
  283 |         AtomInfo temp_ai;
      |                  ^~~~~~~
In copy constructor 'BALL::Kekuliser::AtomInfo::AtomInfo(const BALL::Kekuliser::AtomInfo&)',
    inlined from 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]' at /usr/include/c++/14/bits/new_allocator.h:191:4,
    inlined from 'static void std::allocator_traits<std::allocator<_CharT> >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]' at /usr/include/c++/14/bits/alloc_traits.h:575:17,
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::Kekuliser::AtomInfo; _Alloc = std::allocator<BALL::Kekuliser::AtomInfo>]' at /usr/include/c++/14/bits/stl_vector.h:1288:30,
    inlined from 'bool BALL::Kekuliser::fixAromaticRings_()' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:350:25:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/kekulizer.h:40:36: warning: 'temp_ai.BALL::Kekuliser::AtomInfo::max_double' may be used uninitialized [-Wmaybe-uninitialized]
   40 |                 struct BALL_EXPORT AtomInfo
      |                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C: In member function 'bool BALL::Kekuliser::fixAromaticRings_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/kekulizer.C:283:18: note: 'temp_ai' declared here
  283 |         AtomInfo temp_ai;
      |                  ^~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/molecularSimilarity.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C: In member function 'void BALL::MolecularSimilarity::generateFingerprint(BALL::Molecule&, std::vector<unsigned int>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/molecularSimilarity.C:405:40: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  405 |                 catch(BALL::Exception::GeneralException)
      |                                        ^~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/mutator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/mutator.C:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/nucleotideMapping.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/nucleotideMapping.C:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricProperties.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/numericalSAS.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = const BALL::Atom*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = const BALL::Atom*; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = const BALL::Atom*; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = const BALL::Atom*]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<const BALL::Atom*>; DataType = BALL::HashGridBox3<const BALL::Atom*>; Position = unsigned int; Traits = BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = const BALL::Atom*; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<const BALL::Atom*>, BALL::HashGridBox3<const BALL::Atom*>, unsigned int, BALL::HashGridBox3<const BALL::Atom*>::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/numericalSAS.C:150:72:   required from here
  150 |                         HashGridBox3<Atom const*>::BoxIterator neighbour_box = box->beginBox();
      |                                                                                ~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptides.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptides.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptides.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideBuilder.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C: In member function 'BALL::PDBAtom* BALL::Peptides::PeptideBuilder::getAtomByName_(BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:616:52: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  616 |                         for (ai = res.beginPDBAtom(); +ai; ++ai)
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C: In member function 'BALL::PDBAtom* BALL::Peptides::PeptideBuilder::getAtomByName_(BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideBuilder.C:616:52: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' first required here
  616 |                         for (ai = res.beginPDBAtom(); +ai; ++ai)
      |                                                    ^
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/peptideCapProcessor.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C: In member function 'virtual BALL::Processor::Result BALL::PeptideCapProcessor::operator()(BALL::Chain&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:211:65: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  211 |                         n_atom = chain.getResidue(0)->beginAtom();
      |                                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C: In member function 'virtual BALL::Processor::Result BALL::PeptideCapProcessor::operator()(BALL::Chain&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:211:65: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  211 |                         n_atom = chain.getResidue(0)->beginAtom();
      |                                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/peptideCapProcessor.C:239:65: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  239 |                         n_atom = chain.getResidue(1)->beginAtom();
      |                                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/radialDistributionFunction.C
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C: In static member function 'static BALL::Triple<bool, const BALL::Atom*, const BALL::Atom*> BALL::ReconstructFragmentProcessor::getTwoReferenceAtoms(const BALL::Atom&, const BALL::HashSet<const BALL::Atom*>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:77:76: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 |                                                 bond = (*current)->endBond();
      |                                                                            ^
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C: In static member function 'static BALL::Triple<bool, const BALL::Atom*, const BALL::Atom*> BALL::ReconstructFragmentProcessor::getTwoReferenceAtoms(const BALL::Atom&, const BALL::HashSet<const BALL::Atom*>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reconstructFragmentProcessor.C:77:76: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   77 |                                                 bond = (*current)->endBond();
      |                                                                            ^
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RDFIntegrator.C
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RDFParameter.C
[ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RDFSection.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reducedSurface.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/reducedSurface.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reducedSurface.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reducedSurface.C:1883:27:   required from here
 1883 |                         for (b = box->beginBox(); b != box->endBox() && !too_close; b++)
      |                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits& BALL::HashGridBox3<unsigned int>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<unsigned int>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reducedSurface.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = unsigned int]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = unsigned int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = unsigned int]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = unsigned int; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<unsigned int>, BALL::HashGridBox3<unsigned int>, unsigned int, BALL::HashGridBox3<unsigned int>::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/reducedSurface.C:1883:26:   required from here
 1883 |                         for (b = box->beginBox(); b != box->endBox() && !too_close; b++)
      |                                  ~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueChecker.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C: In member function 'bool BALL::ResidueChecker::checkCompleteness(const BALL::Residue&, const BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:218:52: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  218 |                 for (atom_it = reference.beginAtom(); +atom_it; ++atom_it)
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:224:50: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  224 |                 for (atom_it = residue.beginAtom(); +atom_it; ++atom_it)
      |                                                  ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C: In member function 'bool BALL::ResidueChecker::checkAtomPositions(const BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:278:46: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  278 |                 for (atom_it = res.beginAtom(); +atom_it; ++atom_it)
      |                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:298:41: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  298 |                         for (atom_it2 = atom_it, ++atom_it2; +atom_it2; ++atom_it2)
      |                                         ^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C: In member function 'bool BALL::ResidueChecker::checkTemplate(const BALL::Residue&, const BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:393:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  393 |                 BALL_FOREACH_BOND(reference, bond_atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:393:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  393 |                 BALL_FOREACH_BOND(reference, bond_atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C: In member function 'bool BALL::ResidueChecker::checkTemplate(const BALL::Residue&, const BALL::Residue&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:393:17: note: in expansion of macro 'BALL_FOREACH_BOND'
  393 |                 BALL_FOREACH_BOND(reference, bond_atom_it, bond_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueChecker.C:397:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  397 |                         for (atom_it = residue.beginAtom(); +atom_it && (first == 0 || second == 0); ++atom_it)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rGroupAssembler.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rGroupAssembler.C:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/ringAnalyser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/ringAnalyser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RSEdge.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RSFace.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RSVertex.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SASEdge.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SASFace.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SASVertex.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/ringAnalyser.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/sdGenerator.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::prepare_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:56:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
   56 |                         BALL_FOREACH_ATOM(*system_, at_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::prepare_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:56:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
   56 |                         BALL_FOREACH_ATOM(*system_, at_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:89:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
   89 |                 BALL_FOREACH_ATOM(*system_, at_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:117:41: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  117 |                                         BALL_FOREACH_ATOM_BOND(*at_it, bond_it)
      |                                         ^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   47 |                 BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h: In member function 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method 'BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::prepare_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' first required here
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:117:41: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  117 |                                         BALL_FOREACH_ATOM_BOND(*at_it, bond_it)
      |                                         ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:143:49: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  143 |                                                 BALL_FOREACH_ATOM_BOND(*partner, next_bond_it)
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::clear()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:199:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
  199 |                 BALL_FOREACH_ATOM(*system_, at_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::generateSD(BALL::System&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:252:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
  252 |                 BALL_FOREACH_ATOM(*system_, at_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::computeShelleyPriorities_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:311:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
  311 |                 BALL_FOREACH_ATOM(*system_, at_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:318:25: note: in expansion of macro 'BALL_FOREACH_ATOM'
  318 |                         BALL_FOREACH_ATOM(*system_, at_it)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:324:33: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
  324 |                                 BALL_FOREACH_ATOM_BOND(*at_it, b_it)
      |                                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:337:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
  337 |                 BALL_FOREACH_ATOM(*system_, at_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::treatChains_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:992:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
  992 |                 BALL_FOREACH_ATOM(*system_, at_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1103:25: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1103 |                         BALL_FOREACH_ATOM_BOND(*first_atom, b_it)
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1116:25: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1116 |                         BALL_FOREACH_ATOM_BOND(*first_atom, b_it)
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'BALL::Angle BALL::SDGenerator::computeAngularSeparation_(BALL::Atom*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1139:17: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1139 |                 BALL_FOREACH_ATOM_BOND(*seed, b_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'std::vector<BALL::Atom*> BALL::SDGenerator::sequenceSubstituents_(BALL::Atom*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1235:17: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1235 |                 BALL_FOREACH_ATOM_BOND(*seed, b_it)
      |                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1353:41: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1353 |                                         BALL_FOREACH_ATOM_BOND(*seed, b_it)
      |                                         ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C: In member function 'void BALL::SDGenerator::assembleSD_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   64 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1608:17: note: in expansion of macro 'BALL_FOREACH_ATOM'
 1608 |                 BALL_FOREACH_ATOM(*system_, at_it)
      |                 ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   77 | for (bond_iterator = (bond_container).beginBond(); \
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sdGenerator.C:1730:33: note: in expansion of macro 'BALL_FOREACH_ATOM_BOND'
 1730 |                                 BALL_FOREACH_ATOM_BOND(*seed_atom, b_it)
      |                                 ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because 'BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, BALL::Atom::BondIteratorTraits>' has user-provided 'BALL::RandomAccessIterator<Container, DataType, Position, Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]'
  437 |                 BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SESEdge.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SESFace.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/SESVertex.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/secondaryStructureProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/HBondProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/secondaryStructureProcessor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/secondaryStructureProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/kernel.h:12:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C: In member function 'virtual BALL::Processor::Result BALL::SideChainPlacementProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:362:108: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  362 |                                                         for (   at_it_scwrled=res_it_scwrled->beginPDBAtom();
      |                                                                                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C: In member function 'virtual BALL::Processor::Result BALL::SideChainPlacementProcessor::operator()(BALL::AtomContainer&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:362:108: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' first required here
  362 |                                                         for (   at_it_scwrled=res_it_scwrled->beginPDBAtom();
      |                                                                                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/sideChainPlacementProcessor.C:393:102: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  393 |                                                 for (   at_it_ori = to_mutate[j].first->beginPDBAtom();
      |                                                                                                      ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::PDBAtom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::PDBAtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::PDBAtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smilesParser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smilesParser.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsParser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsParser.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsParser.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsMatcher.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/ringPerceptionProcessor.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/smartsMatcher.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventAccessibleSurface.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/circle3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RSEdge.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/SESEdge.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:1587:27:   required from here
 1587 |                         for (b = box->beginBox(); b != box->endBox(); b++)
      |                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<int>::BoxIteratorTraits& BALL::HashGridBox3<int>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<int>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<int>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = int]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:2156:27:   required from here
 2156 |                         for (b = box->beginBox(); b != box->endBox(); b++)
      |                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits& BALL::HashGridBox3<unsigned int>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<unsigned int>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = unsigned int]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = int; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = int; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = int]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<int>; DataType = BALL::HashGridBox3<int>; Position = unsigned int; Traits = BALL::HashGridBox3<int>::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = int; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<int>, BALL::HashGridBox3<int>, unsigned int, BALL::HashGridBox3<int>::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:1587:26:   required from here
 1587 |                         for (b = box->beginBox(); b != box->endBox(); b++)
      |                                  ~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = unsigned int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = unsigned int]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = unsigned int; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<unsigned int>, BALL::HashGridBox3<unsigned int>, unsigned int, BALL::HashGridBox3<unsigned int>::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/solventExcludedSurface.C:2156:26:   required from here
 2156 |                         for (b = box->beginBox(); b != box->endBox(); b++)
      |                                  ~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/geometricTransformations.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:17:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In member function 'BALL::Size BALL::StructureMapper::countFragments_(const BALL::AtomContainer&) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:54:49: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
   54 |                 for (it = ac.beginAtomContainer(); +it; ++it)
      |                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In static member function 'static BALL::Matrix4x4 BALL::StructureMapper::matchBackboneAtoms(const BALL::Residue&, const BALL::Residue&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:425:45: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  425 |                 for (atom_it = r1.beginAtom(); +atom_it; ++atom_it)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:448:45: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  448 |                 for (atom_it = r2.beginAtom(); +atom_it; ++atom_it)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In member function 'std::vector<std::vector<BALL::Fragment*> >& BALL::StructureMapper::searchPattern(std::vector<BALL::Fragment*>&, BALL::AtomContainer&, double, double, double, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:556:56: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  556 |                 for     (ac_it = ac.beginAtomContainer();
      |                                                        ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomContainerIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In member function 'std::vector<std::vector<BALL::Fragment*> >& BALL::StructureMapper::searchPattern(std::vector<BALL::Fragment*>&, BALL::AtomContainer&, double, double, double, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:556:56: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::AtomContainer, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomContainerIteratorTraits>&)' first required here
  556 |                 for     (ac_it = ac.beginAtomContainer();
      |                                                        ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In member function 'BALL::Matrix4x4 BALL::StructureMapper::mapProteins(BALL::Protein&, BALL::Protein&, std::map<BALL::String, unsigned int>&, BALL::Size&, double&, double, double, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:713:44: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  713 |                 for(atom_it = P1.beginAtom(); +atom_it; ++atom_it)
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C: In member function 'BALL::Matrix4x4 BALL::StructureMapper::mapProteins(BALL::Protein&, BALL::Protein&, std::map<BALL::String, unsigned int>&, BALL::Size&, double&, double, double, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:713:44: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' first required here
  713 |                 for(atom_it = P1.beginAtom(); +atom_it; ++atom_it)
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:740:44: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  740 |                 for(atom_it = P2.beginAtom(); +atom_it; ++atom_it)
      |                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  237 |                         ConstForwardIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:774:34:   required from here
  774 |                                 for(b_it2 =(*b_it1).beginBox(); +b_it2; ++b_it2)
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits& BALL::HashGridBox3<unsigned int>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<unsigned int>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = unsigned int]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
  237 |                         ConstForwardIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:865:40:   required from here
  865 |                                                                                                         for(b_it4 = box->beginBox(); +b_it4; ++b_it4)
      |                                                                                                                                   ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits& BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits::operator=(const BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = BALL::TVector3<unsigned int>]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = unsigned int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = unsigned int]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = unsigned int; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<unsigned int>, BALL::HashGridBox3<unsigned int>, unsigned int, BALL::HashGridBox3<unsigned int>::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:774:33:   required from here
  774 |                                 for(b_it2 =(*b_it1).beginBox(); +b_it2; ++b_it2)
      |                                            ~~~~~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::TVector3<unsigned int>; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TVector3<unsigned int>; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TVector3<unsigned int>; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::TVector3<unsigned int>]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::TVector3<unsigned int>; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::TVector3<unsigned int> >, BALL::HashGridBox3<BALL::TVector3<unsigned int> >, unsigned int, BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/structureMapper.C:865:39:   required from here
  865 |                                                                                                         for(b_it4 = box->beginBox(); +b_it4; ++b_it4)
      |                                                                                                                     ~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/surfaceProcessor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/surfaceProcessor.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/surfaceProcessor.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
 1667 |                                 s << "    " << getIndex_(box_[i]) << std::endl;
      |                                                ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
 1625 |         void HashGrid3<Item>::dump(std::ostream& s, Size depth) const
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangle.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangleEdge.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/trianglePoint.C
[ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C: In member function 'void BALL::SASTriangulator::onePointOutside(BALL::Index, BALL::Triangle*, BALL::TriangulatedSurface&, BALL::HashGrid3<BALL::TrianglePoint*>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:426:32: warning: variable 'v2' set but not used [-Wunused-but-set-variable]
  426 |                 TrianglePoint* v2;
      |                                ^~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:583:27:   required from here
  583 |                         for (b = box->beginBox(); b != box->endBox(); b++)
      |                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits& BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/triangulatedSAS.h:49,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = BALL::TrianglePoint*]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::TrianglePoint*; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TrianglePoint*; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TrianglePoint*; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::TrianglePoint*]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::TrianglePoint*>; DataType = BALL::HashGridBox3<BALL::TrianglePoint*>; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::TrianglePoint*; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::TrianglePoint*>, BALL::HashGridBox3<BALL::TrianglePoint*>, unsigned int, BALL::HashGridBox3<BALL::TrianglePoint*>::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSAS.C:583:26:   required from here
  583 |                         for (b = box->beginBox(); b != box->endBox(); b++)
      |                                  ~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSES.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/solventExcludedSurface.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSES.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1667:20:   required from 'void BALL::HashGrid3<Item>::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream<char>; BALL::Size = unsigned int]'
 1667 |                                 s << "    " << getIndex_(box_[i]) << std::endl;
      |                                                ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1625:7:   required from here
 1625 |         void HashGrid3<Item>::dump(std::ostream& s, Size depth) const
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSurface.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSurface.C: In member function 'void BALL::TriangulatedSurface::remove(PointIterator, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSurface.C:410:17: warning: pointer used after 'void operator delete(void*)' [-Wuse-after-free]
  410 |                 delete *point;
      |                 ^~~~~~~~~~~~~
In file included from /usr/include/arm-linux-gnueabihf/c++/14/bits/c++allocator.h:33,
                 from /usr/include/c++/14/bits/allocator.h:46,
                 from /usr/include/c++/14/string:43,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/debug.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/graphEdge.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/triangle.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/triangulatedSurface.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSurface.C:5:
In member function 'void std::__new_allocator<_Tp>::deallocate(_Tp*, size_type) [with _Tp = std::_List_node<BALL::TrianglePoint*>]',
    inlined from 'static void std::allocator_traits<std::allocator<_CharT> >::deallocate(allocator_type&, pointer, size_type) [with _Tp = std::_List_node<BALL::TrianglePoint*>]' at /usr/include/c++/14/bits/alloc_traits.h:550:23,
    inlined from 'void std::__cxx11::_List_base<_Tp, _Alloc>::_M_put_node(typename _Node_alloc_traits::pointer) [with _Tp = BALL::TrianglePoint*; _Alloc = std::allocator<BALL::TrianglePoint*>]' at /usr/include/c++/14/bits/stl_list.h:522:39,
    inlined from 'void std::__cxx11::list<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = BALL::TrianglePoint*; _Alloc = std::allocator<BALL::TrianglePoint*>]' at /usr/include/c++/14/bits/stl_list.h:2023:13,
    inlined from 'std::__cxx11::list<_Tp, _Alloc>::iterator std::__cxx11::list<_Tp, _Alloc>::erase(const_iterator) [with _Tp = BALL::TrianglePoint*; _Alloc = std::allocator<BALL::TrianglePoint*>]' at /usr/include/c++/14/bits/list.tcc:158:15,
    inlined from 'void BALL::TriangulatedSurface::remove(PointIterator, bool)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/triangulatedSurface.C:408:16:
/usr/include/c++/14/bits/new_allocator.h:172:33: note: call to 'void operator delete(void*)' here
  172 |         _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n));
      |                                 ^
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/UCK.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/UCK.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/structureMapper.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/residueRotamerSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C: In member function 'BALL::Rotamer BALL::ResidueRotamerSet::getRotamer(const BALL::Residue&) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:636:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  636 |                         for (atom_it = residue.beginAtom(); +atom_it; ++atom_it)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:671:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  671 |                         for (atom_it = residue.beginAtom(); +atom_it; ++atom_it)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:706:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  706 |                         for (atom_it = residue.beginAtom(); +atom_it; ++atom_it)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/residueRotamerSet.C:741:58: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  741 |                         for (atom_it = residue.beginAtom(); +atom_it; ++atom_it)
      |                                                          ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rotamerLibrary.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/fragmentDB.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/rotamerLibrary.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/rotamerLibrary.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RMSDMinimizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/atomBijection.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/RMSDMinimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/STRUCTURE/RMSDMinimizer.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserParser.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from source/STRUCTURE/smilesParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserLexer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:17,
                 from source/STRUCTURE/smilesParserLexer.l:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smilesParser.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserLexer.C: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smilesParserLexer.C:1933:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 1933 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserParser.C
source/STRUCTURE/smartsParserParser.y: In function 'int SmartsParserparse()':
source/STRUCTURE/smartsParserParser.y:369:29: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
In file included from source/STRUCTURE/smartsParserParser.y:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |                                                 void operator = (const Property& rhs);
      |                                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:59: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(Property)'
  334 |                                 void setProperty(Property property);
      |                                                  ~~~~~~~~~^~~~~~~~
source/STRUCTURE/smartsParserParser.y:375:29: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |                                                 void operator = (const Property& rhs);
      |                                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:59: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(Property)'
  334 |                                 void setProperty(Property property);
      |                                                  ~~~~~~~~~^~~~~~~~
source/STRUCTURE/smartsParserParser.y:380:33: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |                                                 void operator = (const Property& rhs);
      |                                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:59: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(Property)'
  334 |                                 void setProperty(Property property);
      |                                                  ~~~~~~~~~^~~~~~~~
source/STRUCTURE/smartsParserParser.y:386:33: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |                                                 void operator = (const Property& rhs);
      |                                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:59: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(Property)'
  334 |                                 void setProperty(Property property);
      |                                                  ~~~~~~~~~^~~~~~~~
source/STRUCTURE/smartsParserParser.y:472:33: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |                                                 void operator = (const Property& rhs);
      |                                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:59: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(Property)'
  334 |                                 void setProperty(Property property);
      |                                                  ~~~~~~~~~^~~~~~~~
source/STRUCTURE/smartsParserParser.y:513:33: warning: implicitly-declared 'constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because 'BALL::SmartsParser::SPAtom::Property' has user-provided 'void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)'
  246 |                                                 void operator = (const Property& rhs);
      |                                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/STRUCTURE/smartsParser.h:334:59: note:   initializing argument 1 of 'void BALL::SmartsParser::SPAtom::setProperty(Property)'
  334 |                                 void setProperty(Property property);
      |                                                  ~~~~~~~~~^~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserLexer.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/source/STRUCTURE/smartsParserLexer.C:2023:24: warning: 'void yy_fatal_error(const char*)' defined but not used [-Wunused-function]
 2023 | static void yynoreturn yy_fatal_error (const char* msg )
      |                        ^~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformation.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformation.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformation.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/constraints.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:22,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/constraints.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformationSet.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/conformationSet.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C: In member function 'virtual double BALL::DockingAlgorithm::dockLigand(BALL::AtomContainer&, bool)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:304:60: warning: unused parameter 'ligand' [-Wunused-parameter]
  304 |         double DockingAlgorithm::dockLigand(AtomContainer& ligand, bool verbose)
      |                                             ~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:304:73: warning: unused parameter 'verbose' [-Wunused-parameter]
  304 |         double DockingAlgorithm::dockLigand(AtomContainer& ligand, bool verbose)
      |                                                                    ~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C: In member function 'void BALL::DockingAlgorithm::processMultiMoleculeFile(std::string, std::string, double, std::vector<double>*, BALL::String, BALL::String)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:549:65: warning: catching polymorphic type 'class BALL::Exception::GeneralException' by value [-Wcatch-value=]
  549 |                         catch(BALL::Exception::GeneralException e)
      |                                                                 ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C: In static member function 'static BALL::Matrix4x4 BALL::DockingAlgorithm::mapCompounds(const BALL::AtomContainer&, const BALL::AtomContainer&, BALL::Size&, double&, double, double, double)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:655:45: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  655 |                 for (atom_it = S1.beginAtom(); +atom_it; ++atom_it)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:680:45: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  680 |                 for (atom_it = S2.beginAtom(); +atom_it; ++atom_it)
      |                                             ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashSet.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SYSTEM/file.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/paramFile.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:22:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  237 |                         ConstForwardIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:713:36:   required from here
  713 |                                 for (b_it2 = (*b_it1).beginBox(); +b_it2; ++b_it2)
      |                                                                ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits& BALL::HashGridBox3<unsigned int>::BoxIteratorTraits::operator=(const BALL::HashGridBox3<unsigned int>::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/constraints.h:26,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:30:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<unsigned int>::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = unsigned int]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h: In instantiation of 'BALL::BaseIterator<Container, DataType, Position, Traits>& BALL::BaseIterator<Container, DataType, Position, Traits>::operator=(const BALL::BaseIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:63:68:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>& BALL::ConstForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ConstForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
   63 |                         BaseIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:237:76:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>& BALL::ForwardIterator<Container, DataType, Position, Traits>::operator=(const BALL::ForwardIterator<Container, DataType, Position, Traits>&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
  237 |                         ConstForwardIterator<Container, DataType, Position, Traits>::operator = (iterator);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:798:38:   required from here
  798 |                                                                                 for (b_it4 = box->beginBox(); +b_it4; ++b_it4) // iterate over all buckets...
      |                                                                                                            ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared 'BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits& BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits::operator=(const BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits&)' is deprecated [-Wdeprecated-copy]
  111 |                         traits_ = iterator.traits_;
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:209:25: note: because 'BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits' has user-provided 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>::BoxIteratorTraits&, bool) [with Item = BALL::TVector3<unsigned int>]'
  209 |                         BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true)
      |                         ^~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = unsigned int; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = unsigned int]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<unsigned int>; DataType = BALL::HashGridBox3<unsigned int>; Position = unsigned int; Traits = BALL::HashGridBox3<unsigned int>::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = unsigned int; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<unsigned int>, BALL::HashGridBox3<unsigned int>, unsigned int, BALL::HashGridBox3<unsigned int>::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:713:35:   required from here
  713 |                                 for (b_it2 = (*b_it1).beginBox(); +b_it2; ++b_it2)
      |                                              ~~~~~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h: In instantiation of 'BALL::Index BALL::HashGrid3<Item>::getIndex_(const BALL::HashGridBox3<Item>&) const [with Item = BALL::TVector3<unsigned int>; BALL::Index = int]':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1516:17:   required from 'bool BALL::HashGrid3<Item>::getIndices(const BALL::HashGridBox3<Item>&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TVector3<unsigned int>; BALL::Position = unsigned int]'
 1516 |                 Index index = getIndex_(box);
      |                               ^~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:563:21:   required from 'void BALL::HashGridBox3<Item>::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TVector3<unsigned int>; BALL::Position = unsigned int]'
  563 |                 parent->getIndices(*this, x, y, z);
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:206:13:   required from 'BALL::HashGridBox3<Item>::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3<Item>&) [with Item = BALL::TVector3<unsigned int>]'
  206 |                                 bound_->getIndices(x_, y_, z_);
      |                                 ~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/baseIterator.h:190:6:   required from 'BALL::BaseIterator<Container, DataType, Position, Traits>::BaseIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
  190 |                         :       traits_(container)
      |                                 ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:128:67:   required from 'BALL::ConstForwardIterator<Container, DataType, Position, Traits>::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
  128 |                         :       BaseIterator<Container, DataType, Position, Traits>(container)
      |                                                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:298:20:   required from 'BALL::ForwardIterator<Container, DataType, Position, Traits>::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
  298 |                         :       Base(container)
      |                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/forwardIterator.h:309:19:   required from 'static BALL::ForwardIterator<Container, DataType, Position, Traits> BALL::ForwardIterator<Container, DataType, Position, Traits>::begin(const Container&) [with Container = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; DataType = BALL::HashGridBox3<BALL::TVector3<unsigned int> >; Position = unsigned int; Traits = BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits]'
  309 |                 ForwardIterator iterator(container);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:332:29:   required from 'BALL::HashGridBox3<Item>::BoxIterator BALL::HashGridBox3<Item>::beginBox() [with Item = BALL::TVector3<unsigned int>; BoxIterator = BALL::ForwardIterator<BALL::HashGridBox3<BALL::TVector3<unsigned int> >, BALL::HashGridBox3<BALL::TVector3<unsigned int> >, unsigned int, BALL::HashGridBox3<BALL::TVector3<unsigned int> >::BoxIteratorTraits>]'
  332 |                         return BoxIterator::begin(*this);
      |                                ~~~~~~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockingAlgorithm.C:798:37:   required from here
  798 |                                                                                 for (b_it4 = box->beginBox(); +b_it4; ++b_it4) // iterate over all buckets...
      |                                                                                              ~~~~~~~~~~~~~^~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: 'int' and 'BALL::Size' {aka 'unsigned int'} [-Wsign-compare]
 1726 |                 if ((&box < &box_[0]) || (&box - &box_[0]  >= getSize()))
      |                                          ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/secondaryStructure.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBdefs.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:8:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/bitVector.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/property.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/PDBFile.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C: In member function 'bool BALL::DockResult::readDockResult(std::istream&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:402:59: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  402 |                                         catch (Exception::InvalidFormat)
      |                                                           ^~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/dockResult.C:419:59: warning: catching polymorphic type 'class BALL::Exception::InvalidFormat' by value [-Wcatch-value=]
  419 |                                         catch (Exception::InvalidFormat)
      |                                                           ^~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexDefinition.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexDefinition.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexDefinition.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexibleMolecule.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/flexibleMolecule.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/gridAnalysis.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/gridAnalysis.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/gridAnalysis.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/conformationSet.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C: In member function 'bool BALL::PoseClustering::nearestNeighborChainCompute_()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C:927:22: warning: unused variable 'run_parallel' [-Wunused-variable]
  927 |                 bool run_parallel = options.getBool(PoseClustering::Option::RUN_PARALLEL);
      |                      ^~~~~~~~~~~~
In file included from /usr/include/boost/graph/detail/adjacency_list.hpp:35,
                 from /usr/include/boost/graph/adjacency_list.hpp:255,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:53:
In member function 'boost::detail::adj_list_edge_iterator<VertexIterator, OutEdgeIterator, Graph>::self& boost::detail::adj_list_edge_iterator<VertexIterator, OutEdgeIterator, Graph>::operator++() [with VertexIterator = boost::range_detail::integer_iterator<unsigned int>; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>; Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>]',
    inlined from 'void boost::write_graphviz(std::ostream&, const Graph&, VertexPropertiesWriter, EdgePropertiesWriter, GraphPropertiesWriter, VertexID, typename enable_if_c<is_base_and_derived<vertex_list_graph_tag, typename graph_traits<Graph>::traversal_category>::value, graph::detail::no_parameter>::type) [with Graph = adjacency_list<vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int>; VertexPropertiesWriter = BALL::PoseClustering::ClusterTreeWriter_; EdgePropertiesWriter = default_writer; GraphPropertiesWriter = default_writer; VertexID = vec_adj_list_vertex_id_map<BALL::PoseClustering::ClusterProperties, unsigned int>]' at /usr/include/boost/graph/graphviz.hpp:284:63:
/usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:80:13: warning: '((boost::detail::stored_edge_property<unsigned int, boost::no_property>* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_)))[2]' may be used uninitialized [-Wmaybe-uninitialized]
   80 |             if (edges BOOST_GRAPH_MEMBER first
      |             ^~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/poseClustering.C:21:
/usr/include/boost/graph/graphviz.hpp: In function 'void boost::write_graphviz(std::ostream&, const Graph&, VertexPropertiesWriter, EdgePropertiesWriter, GraphPropertiesWriter, VertexID, typename enable_if_c<is_base_and_derived<vertex_list_graph_tag, typename graph_traits<Graph>::traversal_category>::value, graph::detail::no_parameter>::type) [with Graph = adjacency_list<vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int>; VertexPropertiesWriter = BALL::PoseClustering::ClusterTreeWriter_; EdgePropertiesWriter = default_writer; GraphPropertiesWriter = default_writer; VertexID = vec_adj_list_vertex_id_map<BALL::PoseClustering::ClusterProperties, unsigned int>]':
/usr/include/boost/graph/graphviz.hpp:283:51: note: '((boost::detail::stored_edge_property<unsigned int, boost::no_property>* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_)))[2]' was declared here
  283 |     typename graph_traits< Graph >::edge_iterator ei, edge_end;
      |                                                   ^~
In member function 'EdgeDescriptor boost::detail::out_edge_iter<BaseIter, VertexDescriptor, EdgeDescriptor, Difference>::dereference() const [with BaseIter = __gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >; VertexDescriptor = unsigned int; EdgeDescriptor = boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>; Difference = int]',
    inlined from 'static typename Facade::reference boost::iterators::iterator_core_access::dereference(const Facade&) [with Facade = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>]' at /usr/include/boost/iterator/iterator_facade.hpp:631:31,
    inlined from 'boost::iterators::detail::iterator_facade_base<Derived, Value, CategoryOrTraversal, Reference, Difference, false, false>::reference boost::iterators::detail::iterator_facade_base<Derived, Value, CategoryOrTraversal, Reference, Difference, false, false>::operator*() const [with Derived = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>; Value = boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>; CategoryOrTraversal = boost::iterators::random_access_traversal_tag; Reference = boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>; Difference = int]' at /usr/include/boost/iterator/iterator_facade.hpp:737:53,
    inlined from 'boost::detail::adj_list_edge_iterator<VertexIterator, OutEdgeIterator, Graph>::value_type boost::detail::adj_list_edge_iterator<VertexIterator, OutEdgeIterator, Graph>::operator*() const [with VertexIterator = boost::range_detail::integer_iterator<unsigned int>; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>; Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>]' at /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:99:20,
    inlined from 'void boost::write_graphviz(std::ostream&, const Graph&, VertexPropertiesWriter, EdgePropertiesWriter, GraphPropertiesWriter, VertexID, typename enable_if_c<is_base_and_derived<vertex_list_graph_tag, typename graph_traits<Graph>::traversal_category>::value, graph::detail::no_parameter>::type) [with Graph = adjacency_list<vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int>; VertexPropertiesWriter = BALL::PoseClustering::ClusterTreeWriter_; EdgePropertiesWriter = default_writer; GraphPropertiesWriter = default_writer; VertexID = vec_adj_list_vertex_id_map<BALL::PoseClustering::ClusterProperties, unsigned int>]' at /usr/include/boost/graph/graphviz.hpp:288:56:
/usr/include/boost/graph/detail/adjacency_list.hpp:148:48: warning: '*(__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_)).__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >::_M_current' may be used uninitialized [-Wmaybe-uninitialized]
  148 |                 &(*this->base()).get_property());
      |                                                ^
/usr/include/boost/graph/graphviz.hpp: In function 'void boost::write_graphviz(std::ostream&, const Graph&, VertexPropertiesWriter, EdgePropertiesWriter, GraphPropertiesWriter, VertexID, typename enable_if_c<is_base_and_derived<vertex_list_graph_tag, typename graph_traits<Graph>::traversal_category>::value, graph::detail::no_parameter>::type) [with Graph = adjacency_list<vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int>; VertexPropertiesWriter = BALL::PoseClustering::ClusterTreeWriter_; EdgePropertiesWriter = default_writer; GraphPropertiesWriter = default_writer; VertexID = vec_adj_list_vertex_id_map<BALL::PoseClustering::ClusterProperties, unsigned int>]':
/usr/include/boost/graph/graphviz.hpp:283:51: note: '*(__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_)).__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >::_M_current' was declared here
  283 |     typename graph_traits< Graph >::edge_iterator ei, edge_end;
      |                                                   ^~
In member function 'bool boost::detail::adj_list_edge_iterator<VertexIterator, OutEdgeIterator, Graph>::operator!=(const self&) const [with VertexIterator = boost::range_detail::integer_iterator<unsigned int>; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>; Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>]',
    inlined from 'void boost::vec_adj_list_impl<Graph, Config, Base>::copy_impl(const boost::vec_adj_list_impl<Graph, Config, Base>&) [with Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>; Config = boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper<boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2193:52,
    inlined from 'boost::vec_adj_list_impl<Graph, Config, Base>::vec_adj_list_impl(const boost::vec_adj_list_impl<Graph, Config, Base>&) [with Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>; Config = boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper<boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2123:69,
    inlined from 'boost::adjacency_list<OutEdgeListS, VertexListS, DirectedS, VertexProperty, EdgeProperty, GraphProperty, EdgeListS>::adjacency_list(const boost::adjacency_list<OutEdgeListS, VertexListS, DirectedS, VertexProperty, EdgeProperty, GraphProperty, EdgeListS>&) [with OutEdgeListS = boost::vecS; VertexListS = boost::vecS; DirectedS = boost::directedS; VertexProperty = BALL::PoseClustering::ClusterProperties; EdgeProperty = boost::no_property; GraphProperty = unsigned int; EdgeListS = boost::listS]' at /usr/include/boost/graph/adjacency_list.hpp:321:65,
    inlined from 'BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:126:21:
/usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:112:21: warning: '*(boost::detail::stored_edge_property<unsigned int, boost::no_property>* const*)((char*)&ei_end + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_))' may be used uninitialized [-Wmaybe-uninitialized]
  111 |                 || (vCurr != vEnd
      |                    ~~~~~~~~~~~~~~
  112 |                     && edges BOOST_GRAPH_MEMBER first
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                         != x.edges BOOST_GRAPH_MEMBER first);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/graph/detail/adjacency_list.hpp: In copy constructor 'BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)':
/usr/include/boost/graph/detail/adjacency_list.hpp:2192:27: note: '*(boost::detail::stored_edge_property<unsigned int, boost::no_property>* const*)((char*)&ei_end + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_))' was declared here
 2192 |         edge_iterator ei, ei_end;
      |                           ^~~~~~
In file included from /usr/include/c++/14/string:51,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/debug.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:16,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11:
In function 'const _Tp& std::max(const _Tp&, const _Tp&) [with _Tp = unsigned int]',
    inlined from 'std::pair<typename Config::edge_descriptor, bool> boost::add_edge(typename Config::vertex_descriptor, typename Config::vertex_descriptor, const typename Config::edge_property_type&, vec_adj_list_impl<G, C, B>&) [with Graph = adjacency_list<vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int>; Config = detail::adj_list_gen<adjacency_list<vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int>, vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int, listS>::config; Base = directed_graph_helper<detail::adj_list_gen<adjacency_list<vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int>, vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int, listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2259:47,
    inlined from 'std::pair<typename Config::edge_descriptor, bool> boost::add_edge(typename Config::vertex_descriptor, typename Config::vertex_descriptor, vec_adj_list_impl<G, C, B>&) [with Graph = adjacency_list<vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int>; Config = detail::adj_list_gen<adjacency_list<vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int>, vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int, listS>::config; Base = directed_graph_helper<detail::adj_list_gen<adjacency_list<vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int>, vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int, listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2271:20,
    inlined from 'void boost::vec_adj_list_impl<Graph, Config, Base>::copy_impl(const boost::vec_adj_list_impl<Graph, Config, Base>&) [with Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>; Config = boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper<boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2198:27,
    inlined from 'boost::vec_adj_list_impl<Graph, Config, Base>::vec_adj_list_impl(const boost::vec_adj_list_impl<Graph, Config, Base>&) [with Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>; Config = boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper<boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2123:69,
    inlined from 'boost::adjacency_list<OutEdgeListS, VertexListS, DirectedS, VertexProperty, EdgeProperty, GraphProperty, EdgeListS>::adjacency_list(const boost::adjacency_list<OutEdgeListS, VertexListS, DirectedS, VertexProperty, EdgeProperty, GraphProperty, EdgeListS>&) [with OutEdgeListS = boost::vecS; VertexListS = boost::vecS; DirectedS = boost::directedS; VertexProperty = BALL::PoseClustering::ClusterProperties; EdgeProperty = boost::no_property; GraphProperty = unsigned int; EdgeListS = boost::listS]' at /usr/include/boost/graph/adjacency_list.hpp:321:65,
    inlined from 'BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:126:21:
/usr/include/c++/14/bits/stl_algobase.h:262:7: warning: '*(const boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_)).boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>::m_src' may be used uninitialized [-Wmaybe-uninitialized]
  262 |       if (__a < __b)
      |       ^~
/usr/include/boost/graph/detail/adjacency_list.hpp: In copy constructor 'BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)':
/usr/include/boost/graph/detail/adjacency_list.hpp:2192:23: note: '*(const boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_)).boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>::m_src' was declared here
 2192 |         edge_iterator ei, ei_end;
      |                       ^~
In member function 'boost::detail::adj_list_edge_iterator<VertexIterator, OutEdgeIterator, Graph>::self& boost::detail::adj_list_edge_iterator<VertexIterator, OutEdgeIterator, Graph>::operator++() [with VertexIterator = boost::range_detail::integer_iterator<unsigned int>; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>; Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>]',
    inlined from 'void boost::vec_adj_list_impl<Graph, Config, Base>::copy_impl(const boost::vec_adj_list_impl<Graph, Config, Base>&) [with Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>; Config = boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper<boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2193:63,
    inlined from 'boost::vec_adj_list_impl<Graph, Config, Base>::vec_adj_list_impl(const boost::vec_adj_list_impl<Graph, Config, Base>&) [with Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>; Config = boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper<boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2123:69,
    inlined from 'boost::adjacency_list<OutEdgeListS, VertexListS, DirectedS, VertexProperty, EdgeProperty, GraphProperty, EdgeListS>::adjacency_list(const boost::adjacency_list<OutEdgeListS, VertexListS, DirectedS, VertexProperty, EdgeProperty, GraphProperty, EdgeListS>&) [with OutEdgeListS = boost::vecS; VertexListS = boost::vecS; DirectedS = boost::directedS; VertexProperty = BALL::PoseClustering::ClusterProperties; EdgeProperty = boost::no_property; GraphProperty = unsigned int; EdgeListS = boost::listS]' at /usr/include/boost/graph/adjacency_list.hpp:321:65,
    inlined from 'BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:126:21:
/usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:80:13: warning: '((boost::detail::stored_edge_property<unsigned int, boost::no_property>* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_)))[2]' may be used uninitialized [-Wmaybe-uninitialized]
   80 |             if (edges BOOST_GRAPH_MEMBER first
      |             ^~
/usr/include/boost/graph/detail/adjacency_list.hpp: In copy constructor 'BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)':
/usr/include/boost/graph/detail/adjacency_list.hpp:2192:23: note: '((boost::detail::stored_edge_property<unsigned int, boost::no_property>* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_)))[2]' was declared here
 2192 |         edge_iterator ei, ei_end;
      |                       ^~
In member function 'bool boost::detail::adj_list_edge_iterator<VertexIterator, OutEdgeIterator, Graph>::operator!=(const self&) const [with VertexIterator = boost::range_detail::integer_iterator<unsigned int>; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>; Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>]',
    inlined from 'void boost::vec_adj_list_impl<Graph, Config, Base>::copy_impl(const boost::vec_adj_list_impl<Graph, Config, Base>&) [with Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>; Config = boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper<boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2193:52,
    inlined from 'boost::vec_adj_list_impl<Graph, Config, Base>::vec_adj_list_impl(const boost::vec_adj_list_impl<Graph, Config, Base>&) [with Graph = boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>; Config = boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper<boost::detail::adj_list_gen<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int>, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]' at /usr/include/boost/graph/detail/adjacency_list.hpp:2123:69,
    inlined from 'boost::adjacency_list<OutEdgeListS, VertexListS, DirectedS, VertexProperty, EdgeProperty, GraphProperty, EdgeListS>::adjacency_list(const boost::adjacency_list<OutEdgeListS, VertexListS, DirectedS, VertexProperty, EdgeProperty, GraphProperty, EdgeListS>&) [with OutEdgeListS = boost::vecS; VertexListS = boost::vecS; DirectedS = boost::directedS; VertexProperty = BALL::PoseClustering::ClusterProperties; EdgeProperty = boost::no_property; GraphProperty = unsigned int; EdgeListS = boost::listS]' at /usr/include/boost/graph/adjacency_list.hpp:321:65,
    inlined from 'BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)' at /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/poseClustering.h:126:21:
/usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:112:21: warning: '*(__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_)).__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >::_M_current' may be used uninitialized [-Wmaybe-uninitialized]
  111 |                 || (vCurr != vEnd
      |                    ~~~~~~~~~~~~~~
  112 |                     && edges BOOST_GRAPH_MEMBER first
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                         != x.edges BOOST_GRAPH_MEMBER first);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/graph/detail/adjacency_list.hpp: In copy constructor 'BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)':
/usr/include/boost/graph/detail/adjacency_list.hpp:2192:23: note: '*(__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator<boost::range_detail::integer_iterator<unsigned int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS> >::edges.boost::optional<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::<unnamed>.boost::optional_detail::optional_base<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::m_storage.boost::optional_detail::aligned_storage<std::pair<boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >, unsigned int, boost::detail::edge_desc_impl<boost::directed_tag, unsigned int>, int> > >::dummy_)).__gnu_cxx::__normal_iterator<boost::detail::stored_edge_property<unsigned int, boost::no_property>*, std::vector<boost::detail::stored_edge_property<unsigned int, boost::no_property>, std::allocator<boost::detail::stored_edge_property<unsigned int, boost::no_property> > > >::_M_current' was declared here
 2192 |         edge_iterator ei, ei_end;
      |                       ^~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/receptor.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/receptor.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/result.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/fragment.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/residue.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chain.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/chainIterator.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/protein.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/receptor.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/result.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/result.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/sideChainOptimizer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/COMMON/scoringFunction.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/sideChainOptimizer.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/staticLigandFragment.C
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/structurePreparer.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:47:34: note:   by 'BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)'
   47 |                 MolecularWeight& operator = (const MolecularWeight& mw);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:82:32: note:   by 'BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)'
   82 |                 NumberOfBonds& operator = (const NumberOfBonds& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:116:38: note:   by 'BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)'
  116 |                 NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:151:38: note:   by 'BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)'
  151 |                 NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:186:38: note:   by 'BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)'
  186 |                 NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb);
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:220:40: note:   by 'BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)'
  220 |                 NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:254:32: note:   by 'BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)'
  254 |                 NumberOfAtoms& operator = (const NumberOfAtoms& na);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:288:32: note:   by 'BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)'
  288 |                 NumberOfBoron& operator = (const NumberOfBoron& nb);
      |                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:322:33: note:   by 'BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)'
  322 |                 NumberOfCarbon& operator = (const NumberOfCarbon& nc);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:356:35: note:   by 'BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)'
  356 |                 NumberOfNitrogen& operator = (const NumberOfNitrogen& nn);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:389:33: note:   by 'BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)'
  389 |                 NumberOfOxygen& operator = (const NumberOfOxygen& no);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:423:35: note:   by 'BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)'
  423 |                 NumberOfFlourine& operator = (const NumberOfFlourine& nf);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:457:37: note:   by 'BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)'
  457 |                 NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:491:33: note:   by 'BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)'
  491 |                 NumberOfSulfur& operator = (const NumberOfSulfur& ns);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:525:35: note:   by 'BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)'
  525 |                 NumberOfChlorine& operator = (const NumberOfChlorine& nc);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:559:34: note:   by 'BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)'
  559 |                 NumberOfBromine& operator = (const NumberOfBromine& nb);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:593:33: note:   by 'BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)'
  593 |                 NumberOfIodine& operator = (const NumberOfIodine& ni);
      |                                 ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:627:35: note:   by 'BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)'
  627 |                 NumberOfHydrogen& operator = (const NumberOfHydrogen& nh);
      |                                   ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:661:31: note:   by 'BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)'
  661 |                 FormalCharge& operator = (const FormalCharge& fc);
      |                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:697:37: note:   by 'BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)'
  697 |                 NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:736:45: note:   by 'BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)'
  736 |                 MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:770:41: note:   by 'BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)'
  770 |                 AtomInformationContent& operator = (const AtomInformationContent& aic);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:812:47: note:   by 'BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)'
  812 |                 NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb);
      |                                               ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:848:50: note:   by 'BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)'
  848 |                 RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb);
      |                                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:889:40: note:   by 'BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)'
  889 |                 NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa);
      |                                        ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:924:37: note:   by 'BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)'
  924 |                 NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:959:41: note:   by 'BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)'
  959 |                 NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:995:44: note:   by 'BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)'
  995 |                 RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1037:34: note:   by 'BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)'
 1037 |                 VertexAdjacency& operator = (const VertexAdjacency& va);
      |                                  ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1082:42: note:   by 'BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)'
 1082 |                 VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae);
      |                                          ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1147:48: note:   by 'BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)'
 1147 |                 NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba);
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1211:45: note:   by 'BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)'
 1211 |                 NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd);
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1275:43: note:   by 'BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)'
 1275 |                 NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1318:39: note:   by 'BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)'
 1318 |                 BondPolarizabilities& operator = (const BondPolarizabilities& bp);
      |                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1353:41: note:   by 'BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)'
 1353 |                 AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap);
      |                                         ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1387:29: note:   by 'BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)'
 1387 |                 SizeOfSSSR& operator = (const SizeOfSSSR& sssr);
      |                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1422:43: note:   by 'BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)'
 1422 |                 PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi);
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1458:44: note:   by 'BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)'
 1458 |                 PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1493:44: note:   by 'BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)'
 1493 |                 PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy);
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleBase.h:54:37: warning: 'virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)' was hidden [-Woverloaded-virtual=]
   54 |                 virtual SimpleBase& operator = (const SimpleBase& sb);
      |                                     ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/QSAR/simpleDescriptors.h:1529:44: note:   by 'BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)'
 1529 |                 PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz);
      |                                            ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/COMMON/structurePreparer.C:15:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/dockProblem.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/molecule.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/dockProblem.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/simpleBox3.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/FORMAT/HINFile.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/dockProblem.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData3D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/rtti.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C: In member function 'virtual void BALL::EvolutionaryDocking::setup(BALL::System&, BALL::ScoringFunction*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:148:79: warning: 'new' of type 'BALL::DockProblem' with extended alignment 16 [-Waligned-new=]
  148 |                 dp_ = new DockProblem(ligand, sf, this, post_dock_optimization);
      |                                                                               ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:148:79: note: uses 'void* operator new(std::size_t)', which does not have an alignment parameter
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:148:79: note: use '-faligned-new' to enable C++17 over-aligned new support
[ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/genes.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/genes.C: In member function 'virtual BALL::GenericGene* BALL::QuaternionGene::mate(BALL::GenericGene*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/genes.C:203:54: warning: 'new' of type 'BALL::QuaternionGene' with extended alignment 16 [-Waligned-new=]
  203 |                         QuaternionGene *result = new QuaternionGene;
      |                                                      ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/genes.C:203:54: note: uses 'void* operator new(std::size_t)', which does not have an alignment parameter
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/genes.C:203:54: note: use '-faligned-new' to enable C++17 over-aligned new support
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/genes.C: In member function 'virtual BALL::GenericGene* BALL::QuaternionGene::clone()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/genes.C:248:41: warning: 'new' of type 'BALL::QuaternionGene' with extended alignment 16 [-Waligned-new=]
  248 |                 QuaternionGene *g = new QuaternionGene;
      |                                         ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/genes.C:248:41: note: uses 'void* operator new(std::size_t)', which does not have an alignment parameter
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/genes.C:248:41: note: use '-faligned-new' to enable C++17 over-aligned new support
[100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/dockProblem.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/quaternion.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/genes.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/geneticIndividual.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/geneticAlgorithm.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:18,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/dockProblem.h:20:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:81:38: warning: 'virtual void BALL::DockingAlgorithm::setup(BALL::System&, BALL::System&)' was hidden [-Woverloaded-virtual=]
   81 |                         virtual void setup(System& receptor, System& ligand);
      |                                      ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:85:30: note:   by 'BALL::EvolutionaryDocking::setup'
   85 |                         void setup(System & receptor, System & ligand, Options & new_options);
      |                              ^~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C: In member function 'bool BALL::GeneticAlgorithm::registerParameter(BALL::GenericParameter*)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:474:57: warning: 'new' of type 'BALL::QuaternionGene' with extended alignment 16 [-Waligned-new=]
  474 |                         template_individual_.insert(new QuaternionGene);
      |                                                         ^~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:474:57: note: uses 'void* operator new(std::size_t)', which does not have an alignment parameter
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:474:57: note: use '-faligned-new' to enable C++17 over-aligned new support
[100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/geneticIndividual.C
[100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/parameter.C
[100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBond.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBond.C:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/matrix44.h:23,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/GENETICDOCK/rotateBond.h:11,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBond.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBonds.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/bond.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBonds.C:7:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/GENETICDOCK/rotateBonds.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:6:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector3.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/common.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/options.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/DOCKING/IMGDOCK/IMGDock.C:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
[100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/binaryFileAdaptor.C
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/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/directory.C
[100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/file.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/file.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/file.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/file.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/file.C
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/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/fileSystem.C
[100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/mutex.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/mutex.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/mutex.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/mutex.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/mutex.C
[100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/networking.C
In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9,
                 from /usr/include/boost/bind/bind.hpp:24,
                 from /usr/include/boost/bind.hpp:29,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/networking.C:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/path.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/path.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/path.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/path.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/path.C
[100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/simpleDownloader.C
[100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/sysinfo.C
[100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/SYSTEM/timer.C
[100%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o -MF CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o.d -o CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomContainer.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/XRAY/crystalGenerator.h:8,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:1:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/composite.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atom.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:11:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C: In member function 'std::__cxx11::list<BALL::System*> BALL::CrystalGenerator::generateSymMoleculesWithinDistance(float)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:269:76: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  269 |                                                                 temp_mit = mit;
      |                                                                            ^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::MoleculeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::MoleculeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C: In member function 'std::__cxx11::list<BALL::System*> BALL::CrystalGenerator::generateSymMoleculesWithinDistance(float)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:269:76: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' first required here
  269 |                                                                 temp_mit = mit;
      |                                                                            ^~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalGenerator.C:272:71: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  272 |                                                                 mit = temp_mit;
      |                                                                       ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Molecule, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, BALL::MoleculeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; Traits = BALL::MoleculeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[100%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o -MF CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o.d -o CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/crystalInfo.C
[100%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/BALL_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o -MF CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o.d -o CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C: In member function 'virtual bool BALL::SpaceGroupParameters::extractSpaceGroup(BALL::Parameters&, const BALL::String&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C:26:66: warning: unused parameter 'parameters' [-Wunused-parameter]
   26 |         bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const String& space_group)
      |                                                      ~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C:26:92: warning: unused parameter 'space_group' [-Wunused-parameter]
   26 |         bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const String& space_group)
      |                                                                              ~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C: In member function 'virtual bool BALL::SpaceGroupParameters::extractSpaceGroup(BALL::Parameters&, BALL::Position)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C:31:66: warning: unused parameter 'parameters' [-Wunused-parameter]
   31 |         bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const Position iucr_no)
      |                                                      ~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/XRAY/spaceGroupParameters.C:31:93: warning: unused parameter 'iucr_no' [-Wunused-parameter]
   31 |         bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const Position iucr_no)
      |                                                                              ~~~~~~~~~~~~~~~^~~~~~~
[100%] Linking CXX shared library lib/libBALL.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/BALL.dir/link.txt --verbose=1
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/usr/bin/cmake -E cmake_symlink_library lib/libBALL.so.1.5 lib/libBALL.so.1.5 lib/libBALL.so
message after library is built
/usr/bin/cmake -E echo ""

/usr/bin/cmake -E echo ==========================================================================
==========================================================================
/usr/bin/cmake -E echo ""

/usr/bin/cmake -E echo "The BALL library has been built."
The BALL library has been built.
/usr/bin/cmake -E echo ""

/usr/bin/cmake -E echo "You should now build BALLView and the unit tests."
You should now build BALLView and the unit tests.
/usr/bin/cmake -E echo "Then you should test your installation by executing the tests."
Then you should test your installation by executing the tests.
/usr/bin/cmake -E echo ""

/usr/bin/cmake -E echo "Make sure to add the BALL and contrib lib/ path"
Make sure to add the BALL and contrib lib/ path
/usr/bin/cmake -E echo "to your LD_LIBRARY_PATH environment variable."
to your LD_LIBRARY_PATH environment variable.
/usr/bin/cmake -E echo "Otherwise the tests and BALLView will not work."
Otherwise the tests and BALLView will not work.
/usr/bin/cmake -E echo ""

/usr/bin/cmake -E echo "For a full list of targets execute:"
For a full list of targets execute:
/usr/bin/cmake -E echo "make targets"
make targets
/usr/bin/cmake -E echo ""

/usr/bin/cmake -E echo ==========================================================================
==========================================================================
/usr/bin/cmake -E echo ""

make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[100%] Built target BALL
make[4]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles 0
make[3]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/Makefile2 VIEW
make[3]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
/usr/bin/cmake -S/build/reproducible-path/ball-1.5.0+git20180813.37fc53c -B/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles 26
make  -f CMakeFiles/Makefile2 CMakeFiles/VIEW.dir/all
make[4]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL_autogen_timestamp_deps.dir/build.make CMakeFiles/BALL_autogen_timestamp_deps.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen_timestamp_deps.dir/DependInfo.cmake "--color="
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL_autogen_timestamp_deps.dir/build.make CMakeFiles/BALL_autogen_timestamp_deps.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[5]: Nothing to be done for 'CMakeFiles/BALL_autogen_timestamp_deps.dir/build'.
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  0%] Built target BALL_autogen_timestamp_deps
make  -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake "--color="
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make[5]: Nothing to be done for 'CMakeFiles/BALL_autogen.dir/build'.
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[  0%] Built target BALL_autogen
make  -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/BALL.dir/DependInfo.cmake "--color="
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
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make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Built target BALL
make  -f CMakeFiles/VIEW_autogen_timestamp_deps.dir/build.make CMakeFiles/VIEW_autogen_timestamp_deps.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/VIEW_autogen_timestamp_deps.dir/DependInfo.cmake "--color="
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/VIEW_autogen_timestamp_deps.dir/build.make CMakeFiles/VIEW_autogen_timestamp_deps.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 61%] Generating include/BALL/VIEW/UIC/ui_FDPBDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_FDPBDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/FDPBDialog.ui
[ 61%] Generating include/BALL/VIEW/UIC/ui_HTMLViewErrorWidget.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_HTMLViewErrorWidget.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/WIDGETS/HTMLViewErrorWidget.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_MMFF94ConfigurationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_MMFF94ConfigurationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_PTEDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_PTEDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/PTEDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_amberConfigurationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_amberConfigurationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/amberConfigurationDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_assignBondOrderConfigurationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_assignBondOrderConfigurationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/assignBondOrderResultsDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_atomOverview.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_atomOverview.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/atomOverview.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_bondProperties.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_bondProperties.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/bondProperties.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_charmmConfigurationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_charmmConfigurationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/charmmConfigurationDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_clippingDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_clippingDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/clippingDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/coloringSettingsDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_compositeProperties.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_compositeProperties.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/compositeProperties.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_contourSurfaceDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_contourSurfaceDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/contourSurfaceDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_displayProperties.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_displayProperties.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/displayProperties.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_dockDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_dockDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_dockProgressDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_dockProgressDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockProgressDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_dockResultDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_dockResultDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/dockResultDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_downloadElectronDensity.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_downloadElectronDensity.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadElectronDensity.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_downloadPDBFile.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_downloadPDBFile.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/downloadPDBFile.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_editSettings.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_editSettings.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSettings.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_editSingleShortcut.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_editSingleShortcut.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editSingleShortcut.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_editorPDBInfoDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_editorPDBInfoDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/editorPDBInfoDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_exportGeometryDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_exportGeometryDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/exportGeometryDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_fieldLinesDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_fieldLinesDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/fieldLinesDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_generateCrystalDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_generateCrystalDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/generateCrystalDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_gridColorWidget.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_gridColorWidget.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridColorWidget.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_gridVisualizationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_gridVisualizationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/gridVisualizationDialog.ui
[ 65%] Generating include/BALL/VIEW/UIC/ui_labelDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_labelDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/labelDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_lightSettings.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_lightSettings.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/lightSettings.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_mainControlPreferences.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_mainControlPreferences.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/mainControlPreferences.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_materialSettings.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_materialSettings.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/materialSettings.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_minimizationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_minimizationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/minimizationDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_modelSettingsDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_modelSettingsDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modelSettingsDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_modifyRepresentationDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_modifyRepresentationDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/modifyRepresentationDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_molecularDynamicsDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_molecularDynamicsDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/molecularDynamicsDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_networkPreferences.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_networkPreferences.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/networkPreferences.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_openSavePreferences.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_openSavePreferences.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/openSavePreferences.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_parsedFunctionDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_parsedFunctionDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/parsedFunctionDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_peptideDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_peptideDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/peptideDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_pluginDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_pluginDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pluginDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_preferences.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_preferences.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/preferences.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_propEditorWidget.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_propEditorWidget.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/propEditorWidget.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_propertyEditor.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_propertyEditor.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/propertyEditor.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_pubchemDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_pubchemDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/pubchemDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_raytraceableContourSurfaceDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_raytraceableContourSurfaceDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_setCamera.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_setCamera.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setCamera.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_setClippingPlane.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_setClippingPlane.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/setClippingPlane.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_shortcutDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_shortcutDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/shortcutDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_snapShotVisualisation.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_snapShotVisualisation.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/snapShotVisualisation.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_stageSettings.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_stageSettings.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stageSettings.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_stereoSettingsDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_stereoSettingsDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/stereoSettingsDialog.ui
[ 69%] Generating include/BALL/VIEW/UIC/ui_undoManagerDialog.h
/usr/lib/qt5/bin/uic -o /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include/BALL/VIEW/UIC/ui_undoManagerDialog.h /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/source/VIEW/DIALOGS/undoManagerDialog.ui
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target VIEW_autogen_timestamp_deps
make  -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/VIEW_autogen.dir/DependInfo.cmake "--color="
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Automatic MOC for target VIEW
/usr/bin/cmake -E cmake_autogen /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/VIEW_autogen.dir/AutogenInfo.json Release
/usr/bin/cmake -E touch /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/timestamp
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Built target VIEW_autogen
make  -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/depend
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
cd /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/CMakeFiles/VIEW.dir/DependInfo.cmake "--color="
make[5]: Leaving directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
make  -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/build
make[5]: Entering directory '/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build'
[ 69%] Building CXX object CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o
/usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include -I/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -isystem /usr/include/arm-linux-gnueabihf/qt5/QtOpenGL -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtPrintSupport -isystem /usr/include/arm-linux-gnueabihf/qt5/QtTest -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWebEngineWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWebEngineCore -isystem /usr/include/arm-linux-gnueabihf/qt5/QtQuick -isystem /usr/include/arm-linux-gnueabihf/qt5/QtQmlModels -isystem /usr/include/arm-linux-gnueabihf/qt5/QtQml -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWebChannel -isystem /usr/include/arm-linux-gnueabihf/qt5/QtPositioning -g -O2 -ffile-prefix-map=/build/reproducible-path/ball-1.5.0+git20180813.37fc53c=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations  -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o -MF CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/atomIterator.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/system.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/SOLVATION/poissonBoltzmann.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/FDPBDialog.h:20,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_FDPBDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:4:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/object.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistentObject.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MATHS/vector2.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/regularData2D.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/standardDatasets.h:17,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_standardDatasets.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:3:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h: In member function 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because 'BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
   46 |                 BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h: In member function 'void BALL::CompositeIteratorTraits::toRBegin()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)' is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because 'BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>' has user-provided 'BALL::BidirectionalIterator<Container, DataType, Position, Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]'
  283 |                 BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/FDPBDialog.h:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h: At global scope:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/preferencesEntry.h:108:38: warning: 'virtual void BALL::VIEW::PreferencesEntry::readPreferenceEntries(const BALL::INIFile&)' was hidden [-Woverloaded-virtual=]
  108 |                         virtual void readPreferenceEntries(const INIFile& inifile);
      |                                      ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_coloringSettingsDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:14:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h:75:38: note:   by 'virtual void BALL::VIEW::ColoringSettingsDialog::readPreferenceEntries(BALL::INIFile&)'
   75 |                         virtual void readPreferenceEntries(INIFile& inifile);
      |                                      ^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/labelDialog.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_labelDialog.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:29:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h: In member function 'void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:409:29: warning: implicitly-declared 'BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)' is deprecated [-Wdeprecated-copy]
  409 |                  { stage_ = stage;}
      |                             ^~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/message.h:9:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/KERNEL/stage.h:301:25: note: because 'BALL::VIEW::Stage' has user-provided 'BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)'
  301 |                         Stage(const Stage& stage);
      |                         ^~~~~
In file included from /usr/include/arm-linux-gnueabihf/qt5/QtGui/qopengl.h:105,
                 from /usr/include/arm-linux-gnueabihf/qt5/QtOpenGL/qgl.h:45,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/glDisplayList.h:13,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:39,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/stageSettings.h:21,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:51:
/usr/include/GLES3/gl32.h: At global scope:
/usr/include/GLES3/gl32.h:56:25: error: conflicting declaration 'typedef khronos_ssize_t GLsizeiptr'
   56 | typedef khronos_ssize_t GLsizeiptr;
      |                         ^~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:29:
/usr/include/GL/glew.h:1694:19: note: previous declaration as 'typedef ptrdiff_t GLsizeiptr'
 1694 | typedef ptrdiff_t GLsizeiptr;
      |                   ^~~~~~~~~~
/usr/include/GLES3/gl32.h:57:26: error: conflicting declaration 'typedef khronos_intptr_t GLintptr'
   57 | typedef khronos_intptr_t GLintptr;
      |                          ^~~~~~~~
/usr/include/GL/glew.h:1693:19: note: previous declaration as 'typedef ptrdiff_t GLintptr'
 1693 | typedef ptrdiff_t GLintptr;
      |                   ^~~~~~~~
/usr/include/GLES3/gl32.h:507:60: error: 'void __glewActiveTexture(GLenum)' redeclared as different kind of entity
  507 | GL_APICALL void GL_APIENTRY glActiveTexture (GLenum texture);
      |                                                            ^
/usr/include/GL/glew.h:22286:40: note: previous declaration 'void (* __glewActiveTexture)(GLenum)'
22286 | GLEW_FUN_EXPORT PFNGLACTIVETEXTUREPROC __glewActiveTexture;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:508:74: error: 'void __glewAttachShader(GLuint, GLuint)' redeclared as different kind of entity
  508 | GL_APICALL void GL_APIENTRY glAttachShader (GLuint program, GLuint shader);
      |                                                                          ^
/usr/include/GL/glew.h:22401:39: note: previous declaration 'void (* __glewAttachShader)(GLuint, GLuint)'
22401 | GLEW_FUN_EXPORT PFNGLATTACHSHADERPROC __glewAttachShader;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:509:99: error: 'void __glewBindAttribLocation(GLuint, GLuint, const GLchar*)' redeclared as different kind of entity
  509 | GL_APICALL void GL_APIENTRY glBindAttribLocation (GLuint program, GLuint index, const GLchar *name);
      |                                                                                                   ^
/usr/include/GL/glew.h:22402:45: note: previous declaration 'void (* __glewBindAttribLocation)(GLuint, GLuint, const GLchar*)'
22402 | GLEW_FUN_EXPORT PFNGLBINDATTRIBLOCATIONPROC __glewBindAttribLocation;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:510:71: error: 'void __glewBindBuffer(GLenum, GLuint)' redeclared as different kind of entity
  510 | GL_APICALL void GL_APIENTRY glBindBuffer (GLenum target, GLuint buffer);
      |                                                                       ^
/usr/include/GL/glew.h:22382:37: note: previous declaration 'void (* __glewBindBuffer)(GLenum, GLuint)'
22382 | GLEW_FUN_EXPORT PFNGLBINDBUFFERPROC __glewBindBuffer;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:511:81: error: 'void __glewBindFramebuffer(GLenum, GLuint)' redeclared as different kind of entity
  511 | GL_APICALL void GL_APIENTRY glBindFramebuffer (GLenum target, GLuint framebuffer);
      |                                                                                 ^
/usr/include/GL/glew.h:22896:42: note: previous declaration 'void (* __glewBindFramebuffer)(GLenum, GLuint)'
22896 | GLEW_FUN_EXPORT PFNGLBINDFRAMEBUFFERPROC __glewBindFramebuffer;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:512:83: error: 'void __glewBindRenderbuffer(GLenum, GLuint)' redeclared as different kind of entity
  512 | GL_APICALL void GL_APIENTRY glBindRenderbuffer (GLenum target, GLuint renderbuffer);
      |                                                                                   ^
/usr/include/GL/glew.h:22897:43: note: previous declaration 'void (* __glewBindRenderbuffer)(GLenum, GLuint)'
22897 | GLEW_FUN_EXPORT PFNGLBINDRENDERBUFFERPROC __glewBindRenderbuffer;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:514:98: error: 'void __glewBlendColor(GLfloat, GLfloat, GLfloat, GLfloat)' redeclared as different kind of entity
  514 | GL_APICALL void GL_APIENTRY glBlendColor (GLfloat red, GLfloat green, GLfloat blue, GLfloat alpha);
      |                                                                                                  ^
/usr/include/GL/glew.h:22333:37: note: previous declaration 'void (* __glewBlendColor)(GLclampf, GLclampf, GLclampf, GLclampf)'
22333 | GLEW_FUN_EXPORT PFNGLBLENDCOLORPROC __glewBlendColor;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:515:57: error: 'void __glewBlendEquation(GLenum)' redeclared as different kind of entity
  515 | GL_APICALL void GL_APIENTRY glBlendEquation (GLenum mode);
      |                                                         ^
/usr/include/GL/glew.h:22334:40: note: previous declaration 'void (* __glewBlendEquation)(GLenum)'
22334 | GLEW_FUN_EXPORT PFNGLBLENDEQUATIONPROC __glewBlendEquation;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:516:86: error: 'void __glewBlendEquationSeparate(GLenum, GLenum)' redeclared as different kind of entity
  516 | GL_APICALL void GL_APIENTRY glBlendEquationSeparate (GLenum modeRGB, GLenum modeAlpha);
      |                                                                                      ^
/usr/include/GL/glew.h:22403:48: note: previous declaration 'void (* __glewBlendEquationSeparate)(GLenum, GLenum)'
22403 | GLEW_FUN_EXPORT PFNGLBLENDEQUATIONSEPARATEPROC __glewBlendEquationSeparate;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:518:128: error: 'void __glewBlendFuncSeparate(GLenum, GLenum, GLenum, GLenum)' redeclared as different kind of entity
  518 | GL_APICALL void GL_APIENTRY glBlendFuncSeparate (GLenum sfactorRGB, GLenum dfactorRGB, GLenum sfactorAlpha, GLenum dfactorAlpha);
      |                                                                                                                                ^
/usr/include/GL/glew.h:22335:44: note: previous declaration 'void (* __glewBlendFuncSeparate)(GLenum, GLenum, GLenum, GLenum)'
22335 | GLEW_FUN_EXPORT PFNGLBLENDFUNCSEPARATEPROC __glewBlendFuncSeparate;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:519:105: error: 'void __glewBufferData(GLenum, GLsizeiptr, const void*, GLenum)' redeclared as different kind of entity
  519 | GL_APICALL void GL_APIENTRY glBufferData (GLenum target, GLsizeiptr size, const void *data, GLenum usage);
      |                                                                                                         ^
/usr/include/GL/glew.h:22383:37: note: previous declaration 'void (* __glewBufferData)(GLenum, GLsizeiptr, const void*, GLenum)'
22383 | GLEW_FUN_EXPORT PFNGLBUFFERDATAPROC __glewBufferData;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:520:111: error: 'void __glewBufferSubData(GLenum, GLintptr, GLsizeiptr, const void*)' redeclared as different kind of entity
  520 | GL_APICALL void GL_APIENTRY glBufferSubData (GLenum target, GLintptr offset, GLsizeiptr size, const void *data);
      |                                                                                                               ^
/usr/include/GL/glew.h:22384:40: note: previous declaration 'void (* __glewBufferSubData)(GLenum, GLintptr, GLsizeiptr, const void*)'
22384 | GLEW_FUN_EXPORT PFNGLBUFFERSUBDATAPROC __glewBufferSubData;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:521:70: error: 'GLenum __glewCheckFramebufferStatus(GLenum)' redeclared as different kind of entity
  521 | GL_APICALL GLenum GL_APIENTRY glCheckFramebufferStatus (GLenum target);
      |                                                                      ^
/usr/include/GL/glew.h:22899:49: note: previous declaration 'GLenum (* __glewCheckFramebufferStatus)(GLenum)'
22899 | GLEW_FUN_EXPORT PFNGLCHECKFRAMEBUFFERSTATUSPROC __glewCheckFramebufferStatus;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:524:53: error: 'void __glewClearDepthf(GLfloat)' redeclared as different kind of entity
  524 | GL_APICALL void GL_APIENTRY glClearDepthf (GLfloat d);
      |                                                     ^
/usr/include/GL/glew.h:22714:38: note: previous declaration 'void (* __glewClearDepthf)(GLclampf)'
22714 | GLEW_FUN_EXPORT PFNGLCLEARDEPTHFPROC __glewClearDepthf;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:527:59: error: 'void __glewCompileShader(GLuint)' redeclared as different kind of entity
  527 | GL_APICALL void GL_APIENTRY glCompileShader (GLuint shader);
      |                                                           ^
/usr/include/GL/glew.h:22404:40: note: previous declaration 'void (* __glewCompileShader)(GLuint)'
22404 | GLEW_FUN_EXPORT PFNGLCOMPILESHADERPROC __glewCompileShader;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:528:184: error: 'void __glewCompressedTexImage2D(GLenum, GLint, GLenum, GLsizei, GLsizei, GLint, GLsizei, const void*)' redeclared as different kind of entity
  528 | GL_APICALL void GL_APIENTRY glCompressedTexImage2D (GLenum target, GLint level, GLenum internalformat, GLsizei width, GLsizei height, GLint border, GLsizei imageSize, const void *data);
      |                                                                                                                                                                                        ^
/usr/include/GL/glew.h:22289:47: note: previous declaration 'void (* __glewCompressedTexImage2D)(GLenum, GLint, GLenum, GLsizei, GLsizei, GLint, GLsizei, const void*)'
22289 | GLEW_FUN_EXPORT PFNGLCOMPRESSEDTEXIMAGE2DPROC __glewCompressedTexImage2D;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:529:195: error: 'void __glewCompressedTexSubImage2D(GLenum, GLint, GLint, GLint, GLsizei, GLsizei, GLenum, GLsizei, const void*)' redeclared as different kind of entity
  529 | GL_APICALL void GL_APIENTRY glCompressedTexSubImage2D (GLenum target, GLint level, GLint xoffset, GLint yoffset, GLsizei width, GLsizei height, GLenum format, GLsizei imageSize, const void *data);
      |                                                                                                                                                                                                   ^
/usr/include/GL/glew.h:22292:50: note: previous declaration 'void (* __glewCompressedTexSubImage2D)(GLenum, GLint, GLint, GLint, GLsizei, GLsizei, GLenum, GLsizei, const void*)'
22292 | GLEW_FUN_EXPORT PFNGLCOMPRESSEDTEXSUBIMAGE2DPROC __glewCompressedTexSubImage2D;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:532:52: error: 'GLuint __glewCreateProgram()' redeclared as different kind of entity
  532 | GL_APICALL GLuint GL_APIENTRY glCreateProgram (void);
      |                                                    ^
/usr/include/GL/glew.h:22405:40: note: previous declaration 'GLuint (* __glewCreateProgram)()'
22405 | GLEW_FUN_EXPORT PFNGLCREATEPROGRAMPROC __glewCreateProgram;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:533:58: error: 'GLuint __glewCreateShader(GLenum)' redeclared as different kind of entity
  533 | GL_APICALL GLuint GL_APIENTRY glCreateShader (GLenum type);
      |                                                          ^
/usr/include/GL/glew.h:22406:39: note: previous declaration 'GLuint (* __glewCreateShader)(GLenum)'
22406 | GLEW_FUN_EXPORT PFNGLCREATESHADERPROC __glewCreateShader;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:535:78: error: 'void __glewDeleteBuffers(GLsizei, const GLuint*)' redeclared as different kind of entity
  535 | GL_APICALL void GL_APIENTRY glDeleteBuffers (GLsizei n, const GLuint *buffers);
      |                                                                              ^
/usr/include/GL/glew.h:22385:40: note: previous declaration 'void (* __glewDeleteBuffers)(GLsizei, const GLuint*)'
22385 | GLEW_FUN_EXPORT PFNGLDELETEBUFFERSPROC __glewDeleteBuffers;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:536:88: error: 'void __glewDeleteFramebuffers(GLsizei, const GLuint*)' redeclared as different kind of entity
  536 | GL_APICALL void GL_APIENTRY glDeleteFramebuffers (GLsizei n, const GLuint *framebuffers);
      |                                                                                        ^
/usr/include/GL/glew.h:22900:45: note: previous declaration 'void (* __glewDeleteFramebuffers)(GLsizei, const GLuint*)'
22900 | GLEW_FUN_EXPORT PFNGLDELETEFRAMEBUFFERSPROC __glewDeleteFramebuffers;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:537:60: error: 'void __glewDeleteProgram(GLuint)' redeclared as different kind of entity
  537 | GL_APICALL void GL_APIENTRY glDeleteProgram (GLuint program);
      |                                                            ^
/usr/include/GL/glew.h:22407:40: note: previous declaration 'void (* __glewDeleteProgram)(GLuint)'
22407 | GLEW_FUN_EXPORT PFNGLDELETEPROGRAMPROC __glewDeleteProgram;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:538:90: error: 'void __glewDeleteRenderbuffers(GLsizei, const GLuint*)' redeclared as different kind of entity
  538 | GL_APICALL void GL_APIENTRY glDeleteRenderbuffers (GLsizei n, const GLuint *renderbuffers);
      |                                                                                          ^
/usr/include/GL/glew.h:22901:46: note: previous declaration 'void (* __glewDeleteRenderbuffers)(GLsizei, const GLuint*)'
22901 | GLEW_FUN_EXPORT PFNGLDELETERENDERBUFFERSPROC __glewDeleteRenderbuffers;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:539:58: error: 'void __glewDeleteShader(GLuint)' redeclared as different kind of entity
  539 | GL_APICALL void GL_APIENTRY glDeleteShader (GLuint shader);
      |                                                          ^
/usr/include/GL/glew.h:22408:39: note: previous declaration 'void (* __glewDeleteShader)(GLuint)'
22408 | GLEW_FUN_EXPORT PFNGLDELETESHADERPROC __glewDeleteShader;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:543:64: error: 'void __glewDepthRangef(GLfloat, GLfloat)' redeclared as different kind of entity
  543 | GL_APICALL void GL_APIENTRY glDepthRangef (GLfloat n, GLfloat f);
      |                                                                ^
/usr/include/GL/glew.h:22715:38: note: previous declaration 'void (* __glewDepthRangef)(GLclampf, GLclampf)'
22715 | GLEW_FUN_EXPORT PFNGLDEPTHRANGEFPROC __glewDepthRangef;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:544:74: error: 'void __glewDetachShader(GLuint, GLuint)' redeclared as different kind of entity
  544 | GL_APICALL void GL_APIENTRY glDetachShader (GLuint program, GLuint shader);
      |                                                                          ^
/usr/include/GL/glew.h:22409:39: note: previous declaration 'void (* __glewDetachShader)(GLuint, GLuint)'
22409 | GLEW_FUN_EXPORT PFNGLDETACHSHADERPROC __glewDetachShader;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:546:69: error: 'void __glewDisableVertexAttribArray(GLuint)' redeclared as different kind of entity
  546 | GL_APICALL void GL_APIENTRY glDisableVertexAttribArray (GLuint index);
      |                                                                     ^
/usr/include/GL/glew.h:22410:51: note: previous declaration 'void (* __glewDisableVertexAttribArray)(GLuint)'
22410 | GLEW_FUN_EXPORT PFNGLDISABLEVERTEXATTRIBARRAYPROC __glewDisableVertexAttribArray;
      |                                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:550:68: error: 'void __glewEnableVertexAttribArray(GLuint)' redeclared as different kind of entity
  550 | GL_APICALL void GL_APIENTRY glEnableVertexAttribArray (GLuint index);
      |                                                                    ^
/usr/include/GL/glew.h:22412:50: note: previous declaration 'void (* __glewEnableVertexAttribArray)(GLuint)'
22412 | GLEW_FUN_EXPORT PFNGLENABLEVERTEXATTRIBARRAYPROC __glewEnableVertexAttribArray;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:553:136: error: 'void __glewFramebufferRenderbuffer(GLenum, GLenum, GLenum, GLuint)' redeclared as different kind of entity
  553 | GL_APICALL void GL_APIENTRY glFramebufferRenderbuffer (GLenum target, GLenum attachment, GLenum renderbuffertarget, GLuint renderbuffer);
      |                                                                                                                                        ^
/usr/include/GL/glew.h:22902:50: note: previous declaration 'void (* __glewFramebufferRenderbuffer)(GLenum, GLenum, GLenum, GLuint)'
22902 | GLEW_FUN_EXPORT PFNGLFRAMEBUFFERRENDERBUFFERPROC __glewFramebufferRenderbuffer;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:554:132: error: 'void __glewFramebufferTexture2D(GLenum, GLenum, GLenum, GLuint, GLint)' redeclared as different kind of entity
  554 | GL_APICALL void GL_APIENTRY glFramebufferTexture2D (GLenum target, GLenum attachment, GLenum textarget, GLuint texture, GLint level);
      |                                                                                                                                    ^
/usr/include/GL/glew.h:22904:47: note: previous declaration 'void (* __glewFramebufferTexture2D)(GLenum, GLenum, GLenum, GLuint, GLint)'
22904 | GLEW_FUN_EXPORT PFNGLFRAMEBUFFERTEXTURE2DPROC __glewFramebufferTexture2D;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:556:69: error: 'void __glewGenBuffers(GLsizei, GLuint*)' redeclared as different kind of entity
  556 | GL_APICALL void GL_APIENTRY glGenBuffers (GLsizei n, GLuint *buffers);
      |                                                                     ^
/usr/include/GL/glew.h:22388:37: note: previous declaration 'void (* __glewGenBuffers)(GLsizei, GLuint*)'
22388 | GLEW_FUN_EXPORT PFNGLGENBUFFERSPROC __glewGenBuffers;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:557:60: error: 'void __glewGenerateMipmap(GLenum)' redeclared as different kind of entity
  557 | GL_APICALL void GL_APIENTRY glGenerateMipmap (GLenum target);
      |                                                            ^
/usr/include/GL/glew.h:22909:41: note: previous declaration 'void (* __glewGenerateMipmap)(GLenum)'
22909 | GLEW_FUN_EXPORT PFNGLGENERATEMIPMAPPROC __glewGenerateMipmap;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:558:79: error: 'void __glewGenFramebuffers(GLsizei, GLuint*)' redeclared as different kind of entity
  558 | GL_APICALL void GL_APIENTRY glGenFramebuffers (GLsizei n, GLuint *framebuffers);
      |                                                                               ^
/usr/include/GL/glew.h:22907:42: note: previous declaration 'void (* __glewGenFramebuffers)(GLsizei, GLuint*)'
22907 | GLEW_FUN_EXPORT PFNGLGENFRAMEBUFFERSPROC __glewGenFramebuffers;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:559:81: error: 'void __glewGenRenderbuffers(GLsizei, GLuint*)' redeclared as different kind of entity
  559 | GL_APICALL void GL_APIENTRY glGenRenderbuffers (GLsizei n, GLuint *renderbuffers);
      |                                                                                 ^
/usr/include/GL/glew.h:22908:43: note: previous declaration 'void (* __glewGenRenderbuffers)(GLsizei, GLuint*)'
22908 | GLEW_FUN_EXPORT PFNGLGENRENDERBUFFERSPROC __glewGenRenderbuffers;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:561:151: error: 'void __glewGetActiveAttrib(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)' redeclared as different kind of entity
  561 | GL_APICALL void GL_APIENTRY glGetActiveAttrib (GLuint program, GLuint index, GLsizei bufSize, GLsizei *length, GLint *size, GLenum *type, GLchar *name);
      |                                                                                                                                                       ^
/usr/include/GL/glew.h:22413:42: note: previous declaration 'void (* __glewGetActiveAttrib)(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)'
22413 | GLEW_FUN_EXPORT PFNGLGETACTIVEATTRIBPROC __glewGetActiveAttrib;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:562:152: error: 'void __glewGetActiveUniform(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)' redeclared as different kind of entity
  562 | GL_APICALL void GL_APIENTRY glGetActiveUniform (GLuint program, GLuint index, GLsizei bufSize, GLsizei *length, GLint *size, GLenum *type, GLchar *name);
      |                                                                                                                                                        ^
/usr/include/GL/glew.h:22414:43: note: previous declaration 'void (* __glewGetActiveUniform)(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)'
22414 | GLEW_FUN_EXPORT PFNGLGETACTIVEUNIFORMPROC __glewGetActiveUniform;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:563:116: error: 'void __glewGetAttachedShaders(GLuint, GLsizei, GLsizei*, GLuint*)' redeclared as different kind of entity
  563 | GL_APICALL void GL_APIENTRY glGetAttachedShaders (GLuint program, GLsizei maxCount, GLsizei *count, GLuint *shaders);
      |                                                                                                                    ^
/usr/include/GL/glew.h:22415:45: note: previous declaration 'void (* __glewGetAttachedShaders)(GLuint, GLsizei, GLsizei*, GLuint*)'
22415 | GLEW_FUN_EXPORT PFNGLGETATTACHEDSHADERSPROC __glewGetAttachedShaders;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:564:85: error: 'GLint __glewGetAttribLocation(GLuint, const GLchar*)' redeclared as different kind of entity
  564 | GL_APICALL GLint GL_APIENTRY glGetAttribLocation (GLuint program, const GLchar *name);
      |                                                                                     ^
/usr/include/GL/glew.h:22416:44: note: previous declaration 'GLint (* __glewGetAttribLocation)(GLuint, const GLchar*)'
22416 | GLEW_FUN_EXPORT PFNGLGETATTRIBLOCATIONPROC __glewGetAttribLocation;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:566:95: error: 'void __glewGetBufferParameteriv(GLenum, GLenum, GLint*)' redeclared as different kind of entity
  566 | GL_APICALL void GL_APIENTRY glGetBufferParameteriv (GLenum target, GLenum pname, GLint *params);
      |                                                                                               ^
/usr/include/GL/glew.h:22390:47: note: previous declaration 'void (* __glewGetBufferParameteriv)(GLenum, GLenum, GLint*)'
22390 | GLEW_FUN_EXPORT PFNGLGETBUFFERPARAMETERIVPROC __glewGetBufferParameteriv;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:569:129: error: 'void __glewGetFramebufferAttachmentParameteriv(GLenum, GLenum, GLenum, GLint*)' redeclared as different kind of entity
  569 | GL_APICALL void GL_APIENTRY glGetFramebufferAttachmentParameteriv (GLenum target, GLenum attachment, GLenum pname, GLint *params);
      |                                                                                                                                 ^
/usr/include/GL/glew.h:22910:62: note: previous declaration 'void (* __glewGetFramebufferAttachmentParameteriv)(GLenum, GLenum, GLenum, GLint*)'
22910 | GLEW_FUN_EXPORT PFNGLGETFRAMEBUFFERATTACHMENTPARAMETERIVPROC __glewGetFramebufferAttachmentParameteriv;
      |                                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:571:88: error: 'void __glewGetProgramiv(GLuint, GLenum, GLint*)' redeclared as different kind of entity
  571 | GL_APICALL void GL_APIENTRY glGetProgramiv (GLuint program, GLenum pname, GLint *params);
      |                                                                                        ^
/usr/include/GL/glew.h:22418:39: note: previous declaration 'void (* __glewGetProgramiv)(GLuint, GLenum, GLint*)'
22418 | GLEW_FUN_EXPORT PFNGLGETPROGRAMIVPROC __glewGetProgramiv;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:572:115: error: 'void __glewGetProgramInfoLog(GLuint, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of entity
  572 | GL_APICALL void GL_APIENTRY glGetProgramInfoLog (GLuint program, GLsizei bufSize, GLsizei *length, GLchar *infoLog);
      |                                                                                                                   ^
/usr/include/GL/glew.h:22417:44: note: previous declaration 'void (* __glewGetProgramInfoLog)(GLuint, GLsizei, GLsizei*, GLchar*)'
22417 | GLEW_FUN_EXPORT PFNGLGETPROGRAMINFOLOGPROC __glewGetProgramInfoLog;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:573:101: error: 'void __glewGetRenderbufferParameteriv(GLenum, GLenum, GLint*)' redeclared as different kind of entity
  573 | GL_APICALL void GL_APIENTRY glGetRenderbufferParameteriv (GLenum target, GLenum pname, GLint *params);
      |                                                                                                     ^
/usr/include/GL/glew.h:22911:53: note: previous declaration 'void (* __glewGetRenderbufferParameteriv)(GLenum, GLenum, GLint*)'
22911 | GLEW_FUN_EXPORT PFNGLGETRENDERBUFFERPARAMETERIVPROC __glewGetRenderbufferParameteriv;
      |                                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:574:86: error: 'void __glewGetShaderiv(GLuint, GLenum, GLint*)' redeclared as different kind of entity
  574 | GL_APICALL void GL_APIENTRY glGetShaderiv (GLuint shader, GLenum pname, GLint *params);
      |                                                                                      ^
/usr/include/GL/glew.h:22421:38: note: previous declaration 'void (* __glewGetShaderiv)(GLuint, GLenum, GLint*)'
22421 | GLEW_FUN_EXPORT PFNGLGETSHADERIVPROC __glewGetShaderiv;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:575:113: error: 'void __glewGetShaderInfoLog(GLuint, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of entity
  575 | GL_APICALL void GL_APIENTRY glGetShaderInfoLog (GLuint shader, GLsizei bufSize, GLsizei *length, GLchar *infoLog);
      |                                                                                                                 ^
/usr/include/GL/glew.h:22419:43: note: previous declaration 'void (* __glewGetShaderInfoLog)(GLuint, GLsizei, GLsizei*, GLchar*)'
22419 | GLEW_FUN_EXPORT PFNGLGETSHADERINFOLOGPROC __glewGetShaderInfoLog;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:576:128: error: 'void __glewGetShaderPrecisionFormat(GLenum, GLenum, GLint*, GLint*)' redeclared as different kind of entity
  576 | GL_APICALL void GL_APIENTRY glGetShaderPrecisionFormat (GLenum shadertype, GLenum precisiontype, GLint *range, GLint *precision);
      |                                                                                                                                ^
/usr/include/GL/glew.h:22716:51: note: previous declaration 'void (* __glewGetShaderPrecisionFormat)(GLenum, GLenum, GLint*, GLint*)'
22716 | GLEW_FUN_EXPORT PFNGLGETSHADERPRECISIONFORMATPROC __glewGetShaderPrecisionFormat;
      |                                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:577:111: error: 'void __glewGetShaderSource(GLuint, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of entity
  577 | GL_APICALL void GL_APIENTRY glGetShaderSource (GLuint shader, GLsizei bufSize, GLsizei *length, GLchar *source);
      |                                                                                                               ^
/usr/include/GL/glew.h:22420:42: note: previous declaration 'void (* __glewGetShaderSource)(GLuint, GLsizei, GLsizei*, GLchar*)'
22420 | GLEW_FUN_EXPORT PFNGLGETSHADERSOURCEPROC __glewGetShaderSource;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:581:92: error: 'void __glewGetUniformfv(GLuint, GLint, GLfloat*)' redeclared as different kind of entity
  581 | GL_APICALL void GL_APIENTRY glGetUniformfv (GLuint program, GLint location, GLfloat *params);
      |                                                                                            ^
/usr/include/GL/glew.h:22423:39: note: previous declaration 'void (* __glewGetUniformfv)(GLuint, GLint, GLfloat*)'
22423 | GLEW_FUN_EXPORT PFNGLGETUNIFORMFVPROC __glewGetUniformfv;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:582:90: error: 'void __glewGetUniformiv(GLuint, GLint, GLint*)' redeclared as different kind of entity
  582 | GL_APICALL void GL_APIENTRY glGetUniformiv (GLuint program, GLint location, GLint *params);
      |                                                                                          ^
/usr/include/GL/glew.h:22424:39: note: previous declaration 'void (* __glewGetUniformiv)(GLuint, GLint, GLint*)'
22424 | GLEW_FUN_EXPORT PFNGLGETUNIFORMIVPROC __glewGetUniformiv;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:583:86: error: 'GLint __glewGetUniformLocation(GLuint, const GLchar*)' redeclared as different kind of entity
  583 | GL_APICALL GLint GL_APIENTRY glGetUniformLocation (GLuint program, const GLchar *name);
      |                                                                                      ^
/usr/include/GL/glew.h:22422:45: note: previous declaration 'GLint (* __glewGetUniformLocation)(GLuint, const GLchar*)'
22422 | GLEW_FUN_EXPORT PFNGLGETUNIFORMLOCATIONPROC __glewGetUniformLocation;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:584:93: error: 'void __glewGetVertexAttribfv(GLuint, GLenum, GLfloat*)' redeclared as different kind of entity
  584 | GL_APICALL void GL_APIENTRY glGetVertexAttribfv (GLuint index, GLenum pname, GLfloat *params);
      |                                                                                             ^
/usr/include/GL/glew.h:22427:44: note: previous declaration 'void (* __glewGetVertexAttribfv)(GLuint, GLenum, GLfloat*)'
22427 | GLEW_FUN_EXPORT PFNGLGETVERTEXATTRIBFVPROC __glewGetVertexAttribfv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:585:91: error: 'void __glewGetVertexAttribiv(GLuint, GLenum, GLint*)' redeclared as different kind of entity
  585 | GL_APICALL void GL_APIENTRY glGetVertexAttribiv (GLuint index, GLenum pname, GLint *params);
      |                                                                                           ^
/usr/include/GL/glew.h:22428:44: note: previous declaration 'void (* __glewGetVertexAttribiv)(GLuint, GLenum, GLint*)'
22428 | GLEW_FUN_EXPORT PFNGLGETVERTEXATTRIBIVPROC __glewGetVertexAttribiv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:586:98: error: 'void __glewGetVertexAttribPointerv(GLuint, GLenum, void**)' redeclared as different kind of entity
  586 | GL_APICALL void GL_APIENTRY glGetVertexAttribPointerv (GLuint index, GLenum pname, void **pointer);
      |                                                                                                  ^
/usr/include/GL/glew.h:22425:50: note: previous declaration 'void (* __glewGetVertexAttribPointerv)(GLuint, GLenum, void**)'
22425 | GLEW_FUN_EXPORT PFNGLGETVERTEXATTRIBPOINTERVPROC __glewGetVertexAttribPointerv;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:588:59: error: 'GLboolean __glewIsBuffer(GLuint)' redeclared as different kind of entity
  588 | GL_APICALL GLboolean GL_APIENTRY glIsBuffer (GLuint buffer);
      |                                                           ^
/usr/include/GL/glew.h:22396:35: note: previous declaration 'GLboolean (* __glewIsBuffer)(GLuint)'
22396 | GLEW_FUN_EXPORT PFNGLISBUFFERPROC __glewIsBuffer;
      |                                   ^~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:590:69: error: 'GLboolean __glewIsFramebuffer(GLuint)' redeclared as different kind of entity
  590 | GL_APICALL GLboolean GL_APIENTRY glIsFramebuffer (GLuint framebuffer);
      |                                                                     ^
/usr/include/GL/glew.h:22912:40: note: previous declaration 'GLboolean (* __glewIsFramebuffer)(GLuint)'
22912 | GLEW_FUN_EXPORT PFNGLISFRAMEBUFFERPROC __glewIsFramebuffer;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:591:61: error: 'GLboolean __glewIsProgram(GLuint)' redeclared as different kind of entity
  591 | GL_APICALL GLboolean GL_APIENTRY glIsProgram (GLuint program);
      |                                                             ^
/usr/include/GL/glew.h:22429:36: note: previous declaration 'GLboolean (* __glewIsProgram)(GLuint)'
22429 | GLEW_FUN_EXPORT PFNGLISPROGRAMPROC __glewIsProgram;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:592:71: error: 'GLboolean __glewIsRenderbuffer(GLuint)' redeclared as different kind of entity
  592 | GL_APICALL GLboolean GL_APIENTRY glIsRenderbuffer (GLuint renderbuffer);
      |                                                                       ^
/usr/include/GL/glew.h:22913:41: note: previous declaration 'GLboolean (* __glewIsRenderbuffer)(GLuint)'
22913 | GLEW_FUN_EXPORT PFNGLISRENDERBUFFERPROC __glewIsRenderbuffer;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:593:59: error: 'GLboolean __glewIsShader(GLuint)' redeclared as different kind of entity
  593 | GL_APICALL GLboolean GL_APIENTRY glIsShader (GLuint shader);
      |                                                           ^
/usr/include/GL/glew.h:22430:35: note: previous declaration 'GLboolean (* __glewIsShader)(GLuint)'
22430 | GLEW_FUN_EXPORT PFNGLISSHADERPROC __glewIsShader;
      |                                   ^~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:596:58: error: 'void __glewLinkProgram(GLuint)' redeclared as different kind of entity
  596 | GL_APICALL void GL_APIENTRY glLinkProgram (GLuint program);
      |                                                          ^
/usr/include/GL/glew.h:22431:38: note: previous declaration 'void (* __glewLinkProgram)(GLuint)'
22431 | GLEW_FUN_EXPORT PFNGLLINKPROGRAMPROC __glewLinkProgram;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:600:58: error: 'void __glewReleaseShaderCompiler()' redeclared as different kind of entity
  600 | GL_APICALL void GL_APIENTRY glReleaseShaderCompiler (void);
      |                                                          ^
/usr/include/GL/glew.h:22717:48: note: previous declaration 'void (* __glewReleaseShaderCompiler)()'
22717 | GLEW_FUN_EXPORT PFNGLRELEASESHADERCOMPILERPROC __glewReleaseShaderCompiler;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:601:119: error: 'void __glewRenderbufferStorage(GLenum, GLenum, GLsizei, GLsizei)' redeclared as different kind of entity
  601 | GL_APICALL void GL_APIENTRY glRenderbufferStorage (GLenum target, GLenum internalformat, GLsizei width, GLsizei height);
      |                                                                                                                       ^
/usr/include/GL/glew.h:22914:46: note: previous declaration 'void (* __glewRenderbufferStorage)(GLenum, GLenum, GLsizei, GLsizei)'
22914 | GLEW_FUN_EXPORT PFNGLRENDERBUFFERSTORAGEPROC __glewRenderbufferStorage;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:602:78: error: 'void __glewSampleCoverage(GLfloat, GLboolean)' redeclared as different kind of entity
  602 | GL_APICALL void GL_APIENTRY glSampleCoverage (GLfloat value, GLboolean invert);
      |                                                                              ^
/usr/include/GL/glew.h:22331:41: note: previous declaration 'void (* __glewSampleCoverage)(GLclampf, GLboolean)'
22331 | GLEW_FUN_EXPORT PFNGLSAMPLECOVERAGEPROC __glewSampleCoverage;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:604:138: error: 'void __glewShaderBinary(GLsizei, const GLuint*, GLenum, const void*, GLsizei)' redeclared as different kind of entity
  604 | GL_APICALL void GL_APIENTRY glShaderBinary (GLsizei count, const GLuint *shaders, GLenum binaryformat, const void *binary, GLsizei length);
      |                                                                                                                                          ^
/usr/include/GL/glew.h:22718:39: note: previous declaration 'void (* __glewShaderBinary)(GLsizei, const GLuint*, GLenum, const void*, GLsizei)'
22718 | GLEW_FUN_EXPORT PFNGLSHADERBINARYPROC __glewShaderBinary;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:605:122: error: 'void __glewShaderSource(GLuint, GLsizei, const GLchar* const*, const GLint*)' redeclared as different kind of entity
  605 | GL_APICALL void GL_APIENTRY glShaderSource (GLuint shader, GLsizei count, const GLchar *const*string, const GLint *length);
      |                                                                                                                          ^
/usr/include/GL/glew.h:22432:39: note: previous declaration 'void (* __glewShaderSource)(GLuint, GLsizei, const GLchar* const*, const GLint*)'
22432 | GLEW_FUN_EXPORT PFNGLSHADERSOURCEPROC __glewShaderSource;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:607:100: error: 'void __glewStencilFuncSeparate(GLenum, GLenum, GLint, GLuint)' redeclared as different kind of entity
  607 | GL_APICALL void GL_APIENTRY glStencilFuncSeparate (GLenum face, GLenum func, GLint ref, GLuint mask);
      |                                                                                                    ^
/usr/include/GL/glew.h:22433:46: note: previous declaration 'void (* __glewStencilFuncSeparate)(GLenum, GLenum, GLint, GLuint)'
22433 | GLEW_FUN_EXPORT PFNGLSTENCILFUNCSEPARATEPROC __glewStencilFuncSeparate;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:609:76: error: 'void __glewStencilMaskSeparate(GLenum, GLuint)' redeclared as different kind of entity
  609 | GL_APICALL void GL_APIENTRY glStencilMaskSeparate (GLenum face, GLuint mask);
      |                                                                            ^
/usr/include/GL/glew.h:22434:46: note: previous declaration 'void (* __glewStencilMaskSeparate)(GLenum, GLuint)'
22434 | GLEW_FUN_EXPORT PFNGLSTENCILMASKSEPARATEPROC __glewStencilMaskSeparate;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:611:105: error: 'void __glewStencilOpSeparate(GLenum, GLenum, GLenum, GLenum)' redeclared as different kind of entity
  611 | GL_APICALL void GL_APIENTRY glStencilOpSeparate (GLenum face, GLenum sfail, GLenum dpfail, GLenum dppass);
      |                                                                                                         ^
/usr/include/GL/glew.h:22435:44: note: previous declaration 'void (* __glewStencilOpSeparate)(GLenum, GLenum, GLenum, GLenum)'
22435 | GLEW_FUN_EXPORT PFNGLSTENCILOPSEPARATEPROC __glewStencilOpSeparate;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:618:68: error: 'void __glewUniform1f(GLint, GLfloat)' redeclared as different kind of entity
  618 | GL_APICALL void GL_APIENTRY glUniform1f (GLint location, GLfloat v0);
      |                                                                    ^
/usr/include/GL/glew.h:22436:36: note: previous declaration 'void (* __glewUniform1f)(GLint, GLfloat)'
22436 | GLEW_FUN_EXPORT PFNGLUNIFORM1FPROC __glewUniform1f;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:619:94: error: 'void __glewUniform1fv(GLint, GLsizei, const GLfloat*)' redeclared as different kind of entity
  619 | GL_APICALL void GL_APIENTRY glUniform1fv (GLint location, GLsizei count, const GLfloat *value);
      |                                                                                              ^
/usr/include/GL/glew.h:22437:37: note: previous declaration 'void (* __glewUniform1fv)(GLint, GLsizei, const GLfloat*)'
22437 | GLEW_FUN_EXPORT PFNGLUNIFORM1FVPROC __glewUniform1fv;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:620:66: error: 'void __glewUniform1i(GLint, GLint)' redeclared as different kind of entity
  620 | GL_APICALL void GL_APIENTRY glUniform1i (GLint location, GLint v0);
      |                                                                  ^
/usr/include/GL/glew.h:22438:36: note: previous declaration 'void (* __glewUniform1i)(GLint, GLint)'
22438 | GLEW_FUN_EXPORT PFNGLUNIFORM1IPROC __glewUniform1i;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:621:92: error: 'void __glewUniform1iv(GLint, GLsizei, const GLint*)' redeclared as different kind of entity
  621 | GL_APICALL void GL_APIENTRY glUniform1iv (GLint location, GLsizei count, const GLint *value);
      |                                                                                            ^
/usr/include/GL/glew.h:22439:37: note: previous declaration 'void (* __glewUniform1iv)(GLint, GLsizei, const GLint*)'
22439 | GLEW_FUN_EXPORT PFNGLUNIFORM1IVPROC __glewUniform1iv;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:622:80: error: 'void __glewUniform2f(GLint, GLfloat, GLfloat)' redeclared as different kind of entity
  622 | GL_APICALL void GL_APIENTRY glUniform2f (GLint location, GLfloat v0, GLfloat v1);
      |                                                                                ^
/usr/include/GL/glew.h:22440:36: note: previous declaration 'void (* __glewUniform2f)(GLint, GLfloat, GLfloat)'
22440 | GLEW_FUN_EXPORT PFNGLUNIFORM2FPROC __glewUniform2f;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:623:94: error: 'void __glewUniform2fv(GLint, GLsizei, const GLfloat*)' redeclared as different kind of entity
  623 | GL_APICALL void GL_APIENTRY glUniform2fv (GLint location, GLsizei count, const GLfloat *value);
      |                                                                                              ^
/usr/include/GL/glew.h:22441:37: note: previous declaration 'void (* __glewUniform2fv)(GLint, GLsizei, const GLfloat*)'
22441 | GLEW_FUN_EXPORT PFNGLUNIFORM2FVPROC __glewUniform2fv;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:624:76: error: 'void __glewUniform2i(GLint, GLint, GLint)' redeclared as different kind of entity
  624 | GL_APICALL void GL_APIENTRY glUniform2i (GLint location, GLint v0, GLint v1);
      |                                                                            ^
/usr/include/GL/glew.h:22442:36: note: previous declaration 'void (* __glewUniform2i)(GLint, GLint, GLint)'
22442 | GLEW_FUN_EXPORT PFNGLUNIFORM2IPROC __glewUniform2i;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:625:92: error: 'void __glewUniform2iv(GLint, GLsizei, const GLint*)' redeclared as different kind of entity
  625 | GL_APICALL void GL_APIENTRY glUniform2iv (GLint location, GLsizei count, const GLint *value);
      |                                                                                            ^
/usr/include/GL/glew.h:22443:37: note: previous declaration 'void (* __glewUniform2iv)(GLint, GLsizei, const GLint*)'
22443 | GLEW_FUN_EXPORT PFNGLUNIFORM2IVPROC __glewUniform2iv;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:626:92: error: 'void __glewUniform3f(GLint, GLfloat, GLfloat, GLfloat)' redeclared as different kind of entity
  626 | GL_APICALL void GL_APIENTRY glUniform3f (GLint location, GLfloat v0, GLfloat v1, GLfloat v2);
      |                                                                                            ^
/usr/include/GL/glew.h:22444:36: note: previous declaration 'void (* __glewUniform3f)(GLint, GLfloat, GLfloat, GLfloat)'
22444 | GLEW_FUN_EXPORT PFNGLUNIFORM3FPROC __glewUniform3f;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:627:94: error: 'void __glewUniform3fv(GLint, GLsizei, const GLfloat*)' redeclared as different kind of entity
  627 | GL_APICALL void GL_APIENTRY glUniform3fv (GLint location, GLsizei count, const GLfloat *value);
      |                                                                                              ^
/usr/include/GL/glew.h:22445:37: note: previous declaration 'void (* __glewUniform3fv)(GLint, GLsizei, const GLfloat*)'
22445 | GLEW_FUN_EXPORT PFNGLUNIFORM3FVPROC __glewUniform3fv;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:628:86: error: 'void __glewUniform3i(GLint, GLint, GLint, GLint)' redeclared as different kind of entity
  628 | GL_APICALL void GL_APIENTRY glUniform3i (GLint location, GLint v0, GLint v1, GLint v2);
      |                                                                                      ^
/usr/include/GL/glew.h:22446:36: note: previous declaration 'void (* __glewUniform3i)(GLint, GLint, GLint, GLint)'
22446 | GLEW_FUN_EXPORT PFNGLUNIFORM3IPROC __glewUniform3i;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:629:92: error: 'void __glewUniform3iv(GLint, GLsizei, const GLint*)' redeclared as different kind of entity
  629 | GL_APICALL void GL_APIENTRY glUniform3iv (GLint location, GLsizei count, const GLint *value);
      |                                                                                            ^
/usr/include/GL/glew.h:22447:37: note: previous declaration 'void (* __glewUniform3iv)(GLint, GLsizei, const GLint*)'
22447 | GLEW_FUN_EXPORT PFNGLUNIFORM3IVPROC __glewUniform3iv;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:630:104: error: 'void __glewUniform4f(GLint, GLfloat, GLfloat, GLfloat, GLfloat)' redeclared as different kind of entity
  630 | GL_APICALL void GL_APIENTRY glUniform4f (GLint location, GLfloat v0, GLfloat v1, GLfloat v2, GLfloat v3);
      |                                                                                                        ^
/usr/include/GL/glew.h:22448:36: note: previous declaration 'void (* __glewUniform4f)(GLint, GLfloat, GLfloat, GLfloat, GLfloat)'
22448 | GLEW_FUN_EXPORT PFNGLUNIFORM4FPROC __glewUniform4f;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:631:94: error: 'void __glewUniform4fv(GLint, GLsizei, const GLfloat*)' redeclared as different kind of entity
  631 | GL_APICALL void GL_APIENTRY glUniform4fv (GLint location, GLsizei count, const GLfloat *value);
      |                                                                                              ^
/usr/include/GL/glew.h:22449:37: note: previous declaration 'void (* __glewUniform4fv)(GLint, GLsizei, const GLfloat*)'
22449 | GLEW_FUN_EXPORT PFNGLUNIFORM4FVPROC __glewUniform4fv;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:632:96: error: 'void __glewUniform4i(GLint, GLint, GLint, GLint, GLint)' redeclared as different kind of entity
  632 | GL_APICALL void GL_APIENTRY glUniform4i (GLint location, GLint v0, GLint v1, GLint v2, GLint v3);
      |                                                                                                ^
/usr/include/GL/glew.h:22450:36: note: previous declaration 'void (* __glewUniform4i)(GLint, GLint, GLint, GLint, GLint)'
22450 | GLEW_FUN_EXPORT PFNGLUNIFORM4IPROC __glewUniform4i;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:633:92: error: 'void __glewUniform4iv(GLint, GLsizei, const GLint*)' redeclared as different kind of entity
  633 | GL_APICALL void GL_APIENTRY glUniform4iv (GLint location, GLsizei count, const GLint *value);
      |                                                                                            ^
/usr/include/GL/glew.h:22451:37: note: previous declaration 'void (* __glewUniform4iv)(GLint, GLsizei, const GLint*)'
22451 | GLEW_FUN_EXPORT PFNGLUNIFORM4IVPROC __glewUniform4iv;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:634:121: error: 'void __glewUniformMatrix2fv(GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
  634 | GL_APICALL void GL_APIENTRY glUniformMatrix2fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                         ^
/usr/include/GL/glew.h:22452:43: note: previous declaration 'void (* __glewUniformMatrix2fv)(GLint, GLsizei, GLboolean, const GLfloat*)'
22452 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX2FVPROC __glewUniformMatrix2fv;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:635:121: error: 'void __glewUniformMatrix3fv(GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
  635 | GL_APICALL void GL_APIENTRY glUniformMatrix3fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                         ^
/usr/include/GL/glew.h:22453:43: note: previous declaration 'void (* __glewUniformMatrix3fv)(GLint, GLsizei, GLboolean, const GLfloat*)'
22453 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX3FVPROC __glewUniformMatrix3fv;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:636:121: error: 'void __glewUniformMatrix4fv(GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
  636 | GL_APICALL void GL_APIENTRY glUniformMatrix4fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                         ^
/usr/include/GL/glew.h:22454:43: note: previous declaration 'void (* __glewUniformMatrix4fv)(GLint, GLsizei, GLboolean, const GLfloat*)'
22454 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX4FVPROC __glewUniformMatrix4fv;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:637:57: error: 'void __glewUseProgram(GLuint)' redeclared as different kind of entity
  637 | GL_APICALL void GL_APIENTRY glUseProgram (GLuint program);
      |                                                         ^
/usr/include/GL/glew.h:22455:37: note: previous declaration 'void (* __glewUseProgram)(GLuint)'
22455 | GLEW_FUN_EXPORT PFNGLUSEPROGRAMPROC __glewUseProgram;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:638:62: error: 'void __glewValidateProgram(GLuint)' redeclared as different kind of entity
  638 | GL_APICALL void GL_APIENTRY glValidateProgram (GLuint program);
      |                                                              ^
/usr/include/GL/glew.h:22456:42: note: previous declaration 'void (* __glewValidateProgram)(GLuint)'
22456 | GLEW_FUN_EXPORT PFNGLVALIDATEPROGRAMPROC __glewValidateProgram;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:639:70: error: 'void __glewVertexAttrib1f(GLuint, GLfloat)' redeclared as different kind of entity
  639 | GL_APICALL void GL_APIENTRY glVertexAttrib1f (GLuint index, GLfloat x);
      |                                                                      ^
/usr/include/GL/glew.h:22459:41: note: previous declaration 'void (* __glewVertexAttrib1f)(GLuint, GLfloat)'
22459 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB1FPROC __glewVertexAttrib1f;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:640:78: error: 'void __glewVertexAttrib1fv(GLuint, const GLfloat*)' redeclared as different kind of entity
  640 | GL_APICALL void GL_APIENTRY glVertexAttrib1fv (GLuint index, const GLfloat *v);
      |                                                                              ^
/usr/include/GL/glew.h:22460:42: note: previous declaration 'void (* __glewVertexAttrib1fv)(GLuint, const GLfloat*)'
22460 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB1FVPROC __glewVertexAttrib1fv;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:641:81: error: 'void __glewVertexAttrib2f(GLuint, GLfloat, GLfloat)' redeclared as different kind of entity
  641 | GL_APICALL void GL_APIENTRY glVertexAttrib2f (GLuint index, GLfloat x, GLfloat y);
      |                                                                                 ^
/usr/include/GL/glew.h:22465:41: note: previous declaration 'void (* __glewVertexAttrib2f)(GLuint, GLfloat, GLfloat)'
22465 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB2FPROC __glewVertexAttrib2f;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:642:78: error: 'void __glewVertexAttrib2fv(GLuint, const GLfloat*)' redeclared as different kind of entity
  642 | GL_APICALL void GL_APIENTRY glVertexAttrib2fv (GLuint index, const GLfloat *v);
      |                                                                              ^
/usr/include/GL/glew.h:22466:42: note: previous declaration 'void (* __glewVertexAttrib2fv)(GLuint, const GLfloat*)'
22466 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB2FVPROC __glewVertexAttrib2fv;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:643:92: error: 'void __glewVertexAttrib3f(GLuint, GLfloat, GLfloat, GLfloat)' redeclared as different kind of entity
  643 | GL_APICALL void GL_APIENTRY glVertexAttrib3f (GLuint index, GLfloat x, GLfloat y, GLfloat z);
      |                                                                                            ^
/usr/include/GL/glew.h:22471:41: note: previous declaration 'void (* __glewVertexAttrib3f)(GLuint, GLfloat, GLfloat, GLfloat)'
22471 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB3FPROC __glewVertexAttrib3f;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:644:78: error: 'void __glewVertexAttrib3fv(GLuint, const GLfloat*)' redeclared as different kind of entity
  644 | GL_APICALL void GL_APIENTRY glVertexAttrib3fv (GLuint index, const GLfloat *v);
      |                                                                              ^
/usr/include/GL/glew.h:22472:42: note: previous declaration 'void (* __glewVertexAttrib3fv)(GLuint, const GLfloat*)'
22472 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB3FVPROC __glewVertexAttrib3fv;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:645:103: error: 'void __glewVertexAttrib4f(GLuint, GLfloat, GLfloat, GLfloat, GLfloat)' redeclared as different kind of entity
  645 | GL_APICALL void GL_APIENTRY glVertexAttrib4f (GLuint index, GLfloat x, GLfloat y, GLfloat z, GLfloat w);
      |                                                                                                       ^
/usr/include/GL/glew.h:22485:41: note: previous declaration 'void (* __glewVertexAttrib4f)(GLuint, GLfloat, GLfloat, GLfloat, GLfloat)'
22485 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB4FPROC __glewVertexAttrib4f;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:646:78: error: 'void __glewVertexAttrib4fv(GLuint, const GLfloat*)' redeclared as different kind of entity
  646 | GL_APICALL void GL_APIENTRY glVertexAttrib4fv (GLuint index, const GLfloat *v);
      |                                                                              ^
/usr/include/GL/glew.h:22486:42: note: previous declaration 'void (* __glewVertexAttrib4fv)(GLuint, const GLfloat*)'
22486 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB4FVPROC __glewVertexAttrib4fv;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:647:148: error: 'void __glewVertexAttribPointer(GLuint, GLint, GLenum, GLboolean, GLsizei, const void*)' redeclared as different kind of entity
  647 | GL_APICALL void GL_APIENTRY glVertexAttribPointer (GLuint index, GLint size, GLenum type, GLboolean normalized, GLsizei stride, const void *pointer);
      |                                                                                                                                                    ^
/usr/include/GL/glew.h:22493:46: note: previous declaration 'void (* __glewVertexAttribPointer)(GLuint, GLint, GLenum, GLboolean, GLsizei, const void*)'
22493 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBPOINTERPROC __glewVertexAttribPointer;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1082:136: error: 'void __glewDrawRangeElements(GLenum, GLuint, GLuint, GLsizei, GLenum, const void*)' redeclared as different kind of entity
 1082 | GL_APICALL void GL_APIENTRY glDrawRangeElements (GLenum mode, GLuint start, GLuint end, GLsizei count, GLenum type, const void *indices);
      |                                                                                                                                        ^
/usr/include/GL/glew.h:22282:44: note: previous declaration 'void (* __glewDrawRangeElements)(GLenum, GLuint, GLuint, GLsizei, GLenum, const void*)'
22282 | GLEW_FUN_EXPORT PFNGLDRAWRANGEELEMENTSPROC __glewDrawRangeElements;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1083:199: error: 'void __glewTexImage3D(GLenum, GLint, GLint, GLsizei, GLsizei, GLsizei, GLint, GLenum, GLenum, const void*)' redeclared as different kind of entity
 1083 | GL_APICALL void GL_APIENTRY glTexImage3D (GLenum target, GLint level, GLint internalformat, GLsizei width, GLsizei height, GLsizei depth, GLint border, GLenum format, GLenum type, const void *pixels);
      |                                                                                                                                                                                                       ^
/usr/include/GL/glew.h:22283:37: note: previous declaration 'void (* __glewTexImage3D)(GLenum, GLint, GLint, GLsizei, GLsizei, GLsizei, GLint, GLenum, GLenum, const void*)'
22283 | GLEW_FUN_EXPORT PFNGLTEXIMAGE3DPROC __glewTexImage3D;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1084:211: error: 'void __glewTexSubImage3D(GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei, GLenum, GLenum, const void*)' redeclared as different kind of entity
 1084 | GL_APICALL void GL_APIENTRY glTexSubImage3D (GLenum target, GLint level, GLint xoffset, GLint yoffset, GLint zoffset, GLsizei width, GLsizei height, GLsizei depth, GLenum format, GLenum type, const void *pixels);
      |                                                                                                                                                                                                                   ^
/usr/include/GL/glew.h:22284:40: note: previous declaration 'void (* __glewTexSubImage3D)(GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei, GLenum, GLenum, const void*)'
22284 | GLEW_FUN_EXPORT PFNGLTEXSUBIMAGE3DPROC __glewTexSubImage3D;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1085:170: error: 'void __glewCopyTexSubImage3D(GLenum, GLint, GLint, GLint, GLint, GLint, GLint, GLsizei, GLsizei)' redeclared as different kind of entity
 1085 | GL_APICALL void GL_APIENTRY glCopyTexSubImage3D (GLenum target, GLint level, GLint xoffset, GLint yoffset, GLint zoffset, GLint x, GLint y, GLsizei width, GLsizei height);
      |                                                                                                                                                                          ^
/usr/include/GL/glew.h:22281:44: note: previous declaration 'void (* __glewCopyTexSubImage3D)(GLenum, GLint, GLint, GLint, GLint, GLint, GLint, GLsizei, GLsizei)'
22281 | GLEW_FUN_EXPORT PFNGLCOPYTEXSUBIMAGE3DPROC __glewCopyTexSubImage3D;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1086:199: error: 'void __glewCompressedTexImage3D(GLenum, GLint, GLenum, GLsizei, GLsizei, GLsizei, GLint, GLsizei, const void*)' redeclared as different kind of entity
 1086 | GL_APICALL void GL_APIENTRY glCompressedTexImage3D (GLenum target, GLint level, GLenum internalformat, GLsizei width, GLsizei height, GLsizei depth, GLint border, GLsizei imageSize, const void *data);
      |                                                                                                                                                                                                       ^
/usr/include/GL/glew.h:22290:47: note: previous declaration 'void (* __glewCompressedTexImage3D)(GLenum, GLint, GLenum, GLsizei, GLsizei, GLsizei, GLint, GLsizei, const void*)'
22290 | GLEW_FUN_EXPORT PFNGLCOMPRESSEDTEXIMAGE3DPROC __glewCompressedTexImage3D;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1087:225: error: 'void __glewCompressedTexSubImage3D(GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei, GLenum, GLsizei, const void*)' redeclared as different kind of entity
 1087 | GL_APICALL void GL_APIENTRY glCompressedTexSubImage3D (GLenum target, GLint level, GLint xoffset, GLint yoffset, GLint zoffset, GLsizei width, GLsizei height, GLsizei depth, GLenum format, GLsizei imageSize, const void *data);
      |                                                                                                                                                                                                                                 ^
/usr/include/GL/glew.h:22293:50: note: previous declaration 'void (* __glewCompressedTexSubImage3D)(GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei, GLenum, GLsizei, const void*)'
22293 | GLEW_FUN_EXPORT PFNGLCOMPRESSEDTEXSUBIMAGE3DPROC __glewCompressedTexSubImage3D;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1088:65: error: 'void __glewGenQueries(GLsizei, GLuint*)' redeclared as different kind of entity
 1088 | GL_APICALL void GL_APIENTRY glGenQueries (GLsizei n, GLuint *ids);
      |                                                                 ^
/usr/include/GL/glew.h:22389:37: note: previous declaration 'void (* __glewGenQueries)(GLsizei, GLuint*)'
22389 | GLEW_FUN_EXPORT PFNGLGENQUERIESPROC __glewGenQueries;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1089:74: error: 'void __glewDeleteQueries(GLsizei, const GLuint*)' redeclared as different kind of entity
 1089 | GL_APICALL void GL_APIENTRY glDeleteQueries (GLsizei n, const GLuint *ids);
      |                                                                          ^
/usr/include/GL/glew.h:22386:40: note: previous declaration 'void (* __glewDeleteQueries)(GLsizei, const GLuint*)'
22386 | GLEW_FUN_EXPORT PFNGLDELETEQUERIESPROC __glewDeleteQueries;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1090:54: error: 'GLboolean __glewIsQuery(GLuint)' redeclared as different kind of entity
 1090 | GL_APICALL GLboolean GL_APIENTRY glIsQuery (GLuint id);
      |                                                      ^
/usr/include/GL/glew.h:22397:34: note: previous declaration 'GLboolean (* __glewIsQuery)(GLuint)'
22397 | GLEW_FUN_EXPORT PFNGLISQUERYPROC __glewIsQuery;
      |                                  ^~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1091:67: error: 'void __glewBeginQuery(GLenum, GLuint)' redeclared as different kind of entity
 1091 | GL_APICALL void GL_APIENTRY glBeginQuery (GLenum target, GLuint id);
      |                                                                   ^
/usr/include/GL/glew.h:22381:37: note: previous declaration 'void (* __glewBeginQuery)(GLenum, GLuint)'
22381 | GLEW_FUN_EXPORT PFNGLBEGINQUERYPROC __glewBeginQuery;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1092:54: error: 'void __glewEndQuery(GLenum)' redeclared as different kind of entity
 1092 | GL_APICALL void GL_APIENTRY glEndQuery (GLenum target);
      |                                                      ^
/usr/include/GL/glew.h:22387:35: note: previous declaration 'void (* __glewEndQuery)(GLenum)'
22387 | GLEW_FUN_EXPORT PFNGLENDQUERYPROC __glewEndQuery;
      |                                   ^~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1093:85: error: 'void __glewGetQueryiv(GLenum, GLenum, GLint*)' redeclared as different kind of entity
 1093 | GL_APICALL void GL_APIENTRY glGetQueryiv (GLenum target, GLenum pname, GLint *params);
      |                                                                                     ^
/usr/include/GL/glew.h:22395:37: note: previous declaration 'void (* __glewGetQueryiv)(GLenum, GLenum, GLint*)'
22395 | GLEW_FUN_EXPORT PFNGLGETQUERYIVPROC __glewGetQueryiv;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1094:89: error: 'void __glewGetQueryObjectuiv(GLuint, GLenum, GLuint*)' redeclared as different kind of entity
 1094 | GL_APICALL void GL_APIENTRY glGetQueryObjectuiv (GLuint id, GLenum pname, GLuint *params);
      |                                                                                         ^
/usr/include/GL/glew.h:22394:44: note: previous declaration 'void (* __glewGetQueryObjectuiv)(GLuint, GLenum, GLuint*)'
22394 | GLEW_FUN_EXPORT PFNGLGETQUERYOBJECTUIVPROC __glewGetQueryObjectuiv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1095:62: error: 'GLboolean __glewUnmapBuffer(GLenum)' redeclared as different kind of entity
 1095 | GL_APICALL GLboolean GL_APIENTRY glUnmapBuffer (GLenum target);
      |                                                              ^
/usr/include/GL/glew.h:22399:38: note: previous declaration 'GLboolean (* __glewUnmapBuffer)(GLenum)'
22399 | GLEW_FUN_EXPORT PFNGLUNMAPBUFFERPROC __glewUnmapBuffer;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1096:92: error: 'void __glewGetBufferPointerv(GLenum, GLenum, void**)' redeclared as different kind of entity
 1096 | GL_APICALL void GL_APIENTRY glGetBufferPointerv (GLenum target, GLenum pname, void **params);
      |                                                                                            ^
/usr/include/GL/glew.h:22391:44: note: previous declaration 'void (* __glewGetBufferPointerv)(GLenum, GLenum, void**)'
22391 | GLEW_FUN_EXPORT PFNGLGETBUFFERPOINTERVPROC __glewGetBufferPointerv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1097:73: error: 'void __glewDrawBuffers(GLsizei, const GLenum*)' redeclared as different kind of entity
 1097 | GL_APICALL void GL_APIENTRY glDrawBuffers (GLsizei n, const GLenum *bufs);
      |                                                                         ^
/usr/include/GL/glew.h:22411:38: note: previous declaration 'void (* __glewDrawBuffers)(GLsizei, const GLenum*)'
22411 | GLEW_FUN_EXPORT PFNGLDRAWBUFFERSPROC __glewDrawBuffers;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1098:123: error: 'void __glewUniformMatrix2x3fv(GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1098 | GL_APICALL void GL_APIENTRY glUniformMatrix2x3fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                           ^
/usr/include/GL/glew.h:22495:45: note: previous declaration 'void (* __glewUniformMatrix2x3fv)(GLint, GLsizei, GLboolean, const GLfloat*)'
22495 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX2X3FVPROC __glewUniformMatrix2x3fv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1099:123: error: 'void __glewUniformMatrix3x2fv(GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1099 | GL_APICALL void GL_APIENTRY glUniformMatrix3x2fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                           ^
/usr/include/GL/glew.h:22497:45: note: previous declaration 'void (* __glewUniformMatrix3x2fv)(GLint, GLsizei, GLboolean, const GLfloat*)'
22497 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX3X2FVPROC __glewUniformMatrix3x2fv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1100:123: error: 'void __glewUniformMatrix2x4fv(GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1100 | GL_APICALL void GL_APIENTRY glUniformMatrix2x4fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                           ^
/usr/include/GL/glew.h:22496:45: note: previous declaration 'void (* __glewUniformMatrix2x4fv)(GLint, GLsizei, GLboolean, const GLfloat*)'
22496 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX2X4FVPROC __glewUniformMatrix2x4fv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1101:123: error: 'void __glewUniformMatrix4x2fv(GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1101 | GL_APICALL void GL_APIENTRY glUniformMatrix4x2fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                           ^
/usr/include/GL/glew.h:22499:45: note: previous declaration 'void (* __glewUniformMatrix4x2fv)(GLint, GLsizei, GLboolean, const GLfloat*)'
22499 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX4X2FVPROC __glewUniformMatrix4x2fv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1102:123: error: 'void __glewUniformMatrix3x4fv(GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1102 | GL_APICALL void GL_APIENTRY glUniformMatrix3x4fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                           ^
/usr/include/GL/glew.h:22498:45: note: previous declaration 'void (* __glewUniformMatrix3x4fv)(GLint, GLsizei, GLboolean, const GLfloat*)'
22498 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX3X4FVPROC __glewUniformMatrix3x4fv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1103:123: error: 'void __glewUniformMatrix4x3fv(GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1103 | GL_APICALL void GL_APIENTRY glUniformMatrix4x3fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                           ^
/usr/include/GL/glew.h:22500:45: note: previous declaration 'void (* __glewUniformMatrix4x3fv)(GLint, GLsizei, GLboolean, const GLfloat*)'
22500 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX4X3FVPROC __glewUniformMatrix4x3fv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1104:182: error: 'void __glewBlitFramebuffer(GLint, GLint, GLint, GLint, GLint, GLint, GLint, GLint, GLbitfield, GLenum)' redeclared as different kind of entity
 1104 | GL_APICALL void GL_APIENTRY glBlitFramebuffer (GLint srcX0, GLint srcY0, GLint srcX1, GLint srcY1, GLint dstX0, GLint dstY0, GLint dstX1, GLint dstY1, GLbitfield mask, GLenum filter);
      |                                                                                                                                                                                      ^
/usr/include/GL/glew.h:22898:42: note: previous declaration 'void (* __glewBlitFramebuffer)(GLint, GLint, GLint, GLint, GLint, GLint, GLint, GLint, GLbitfield, GLenum)'
22898 | GLEW_FUN_EXPORT PFNGLBLITFRAMEBUFFERPROC __glewBlitFramebuffer;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1105:147: error: 'void __glewRenderbufferStorageMultisample(GLenum, GLsizei, GLenum, GLsizei, GLsizei)' redeclared as different kind of entity
 1105 | GL_APICALL void GL_APIENTRY glRenderbufferStorageMultisample (GLenum target, GLsizei samples, GLenum internalformat, GLsizei width, GLsizei height);
      |                                                                                                                                                   ^
/usr/include/GL/glew.h:22915:57: note: previous declaration 'void (* __glewRenderbufferStorageMultisample)(GLenum, GLsizei, GLenum, GLsizei, GLsizei)'
22915 | GLEW_FUN_EXPORT PFNGLRENDERBUFFERSTORAGEMULTISAMPLEPROC __glewRenderbufferStorageMultisample;
      |                                                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1106:130: error: 'void __glewFramebufferTextureLayer(GLenum, GLenum, GLuint, GLint, GLint)' redeclared as different kind of entity
 1106 | GL_APICALL void GL_APIENTRY glFramebufferTextureLayer (GLenum target, GLenum attachment, GLuint texture, GLint level, GLint layer);
      |                                                                                                                                  ^
/usr/include/GL/glew.h:22906:50: note: previous declaration 'void (* __glewFramebufferTextureLayer)(GLenum, GLenum, GLuint, GLint, GLint)'
22906 | GLEW_FUN_EXPORT PFNGLFRAMEBUFFERTEXTURELAYERPROC __glewFramebufferTextureLayer;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1107:116: error: 'void* __glewMapBufferRange(GLenum, GLintptr, GLsizeiptr, GLbitfield)' redeclared as different kind of entity
 1107 | GL_APICALL void *GL_APIENTRY glMapBufferRange (GLenum target, GLintptr offset, GLsizeiptr length, GLbitfield access);
      |                                                                                                                    ^
/usr/include/GL/glew.h:23039:41: note: previous declaration 'void* (* __glewMapBufferRange)(GLenum, GLintptr, GLsizeiptr, GLbitfield)'
23039 | GLEW_FUN_EXPORT PFNGLMAPBUFFERRANGEPROC __glewMapBufferRange;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1108:104: error: 'void __glewFlushMappedBufferRange(GLenum, GLintptr, GLsizeiptr)' redeclared as different kind of entity
 1108 | GL_APICALL void GL_APIENTRY glFlushMappedBufferRange (GLenum target, GLintptr offset, GLsizeiptr length);
      |                                                                                                        ^
/usr/include/GL/glew.h:23038:49: note: previous declaration 'void (* __glewFlushMappedBufferRange)(GLenum, GLintptr, GLsizeiptr)'
23038 | GLEW_FUN_EXPORT PFNGLFLUSHMAPPEDBUFFERRANGEPROC __glewFlushMappedBufferRange;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1109:60: error: 'void __glewBindVertexArray(GLuint)' redeclared as different kind of entity
 1109 | GL_APICALL void GL_APIENTRY glBindVertexArray (GLuint array);
      |                                                            ^
/usr/include/GL/glew.h:23366:42: note: previous declaration 'void (* __glewBindVertexArray)(GLuint)'
23366 | GLEW_FUN_EXPORT PFNGLBINDVERTEXARRAYPROC __glewBindVertexArray;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1110:82: error: 'void __glewDeleteVertexArrays(GLsizei, const GLuint*)' redeclared as different kind of entity
 1110 | GL_APICALL void GL_APIENTRY glDeleteVertexArrays (GLsizei n, const GLuint *arrays);
      |                                                                                  ^
/usr/include/GL/glew.h:23367:45: note: previous declaration 'void (* __glewDeleteVertexArrays)(GLsizei, const GLuint*)'
23367 | GLEW_FUN_EXPORT PFNGLDELETEVERTEXARRAYSPROC __glewDeleteVertexArrays;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1111:73: error: 'void __glewGenVertexArrays(GLsizei, GLuint*)' redeclared as different kind of entity
 1111 | GL_APICALL void GL_APIENTRY glGenVertexArrays (GLsizei n, GLuint *arrays);
      |                                                                         ^
/usr/include/GL/glew.h:23368:42: note: previous declaration 'void (* __glewGenVertexArrays)(GLsizei, GLuint*)'
23368 | GLEW_FUN_EXPORT PFNGLGENVERTEXARRAYSPROC __glewGenVertexArrays;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1112:63: error: 'GLboolean __glewIsVertexArray(GLuint)' redeclared as different kind of entity
 1112 | GL_APICALL GLboolean GL_APIENTRY glIsVertexArray (GLuint array);
      |                                                               ^
/usr/include/GL/glew.h:23369:40: note: previous declaration 'GLboolean (* __glewIsVertexArray)(GLuint)'
23369 | GLEW_FUN_EXPORT PFNGLISVERTEXARRAYPROC __glewIsVertexArray;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1113:86: error: 'void __glewGetIntegeri_v(GLenum, GLuint, GLint*)' redeclared as different kind of entity
 1113 | GL_APICALL void GL_APIENTRY glGetIntegeri_v (GLenum target, GLuint index, GLint *data);
      |                                                                                      ^
/usr/include/GL/glew.h:23361:40: note: previous declaration 'void (* __glewGetIntegeri_v)(GLenum, GLuint, GLint*)'
23361 | GLEW_FUN_EXPORT PFNGLGETINTEGERI_VPROC __glewGetIntegeri_v;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1114:75: error: 'void __glewBeginTransformFeedback(GLenum)' redeclared as different kind of entity
 1114 | GL_APICALL void GL_APIENTRY glBeginTransformFeedback (GLenum primitiveMode);
      |                                                                           ^
/usr/include/GL/glew.h:22503:49: note: previous declaration 'void (* __glewBeginTransformFeedback)(GLenum)'
22503 | GLEW_FUN_EXPORT PFNGLBEGINTRANSFORMFEEDBACKPROC __glewBeginTransformFeedback;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1115:57: error: 'void __glewEndTransformFeedback()' redeclared as different kind of entity
 1115 | GL_APICALL void GL_APIENTRY glEndTransformFeedback (void);
      |                                                         ^
/usr/include/GL/glew.h:22514:47: note: previous declaration 'void (* __glewEndTransformFeedback)()'
22514 | GLEW_FUN_EXPORT PFNGLENDTRANSFORMFEEDBACKPROC __glewEndTransformFeedback;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1116:124: error: 'void __glewBindBufferRange(GLenum, GLuint, GLuint, GLintptr, GLsizeiptr)' redeclared as different kind of entity
 1116 | GL_APICALL void GL_APIENTRY glBindBufferRange (GLenum target, GLuint index, GLuint buffer, GLintptr offset, GLsizeiptr size);
      |                                                                                                                            ^
/usr/include/GL/glew.h:23356:42: note: previous declaration 'void (* __glewBindBufferRange)(GLenum, GLuint, GLuint, GLintptr, GLsizeiptr)'
23356 | GLEW_FUN_EXPORT PFNGLBINDBUFFERRANGEPROC __glewBindBufferRange;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1117:89: error: 'void __glewBindBufferBase(GLenum, GLuint, GLuint)' redeclared as different kind of entity
 1117 | GL_APICALL void GL_APIENTRY glBindBufferBase (GLenum target, GLuint index, GLuint buffer);
      |                                                                                         ^
/usr/include/GL/glew.h:23355:41: note: previous declaration 'void (* __glewBindBufferBase)(GLenum, GLuint, GLuint)'
23355 | GLEW_FUN_EXPORT PFNGLBINDBUFFERBASEPROC __glewBindBufferBase;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1118:136: error: 'void __glewTransformFeedbackVaryings(GLuint, GLsizei, const GLchar* const*, GLenum)' redeclared as different kind of entity
 1118 | GL_APICALL void GL_APIENTRY glTransformFeedbackVaryings (GLuint program, GLsizei count, const GLchar *const*varyings, GLenum bufferMode);
      |                                                                                                                                        ^
/usr/include/GL/glew.h:22527:52: note: previous declaration 'void (* __glewTransformFeedbackVaryings)(GLuint, GLsizei, const GLchar* const*, GLenum)'
22527 | GLEW_FUN_EXPORT PFNGLTRANSFORMFEEDBACKVARYINGSPROC __glewTransformFeedbackVaryings;
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1119:165: error: 'void __glewGetTransformFeedbackVarying(GLuint, GLuint, GLsizei, GLsizei*, GLsizei*, GLenum*, GLchar*)' redeclared as different kind of entity
 1119 | GL_APICALL void GL_APIENTRY glGetTransformFeedbackVarying (GLuint program, GLuint index, GLsizei bufSize, GLsizei *length, GLsizei *size, GLenum *type, GLchar *name);
      |                                                                                                                                                                     ^
/usr/include/GL/glew.h:22520:54: note: previous declaration 'void (* __glewGetTransformFeedbackVarying)(GLuint, GLuint, GLsizei, GLsizei*, GLsizei*, GLenum*, GLchar*)'
22520 | GLEW_FUN_EXPORT PFNGLGETTRANSFORMFEEDBACKVARYINGPROC __glewGetTransformFeedbackVarying;
      |                                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1120:127: error: 'void __glewVertexAttribIPointer(GLuint, GLint, GLenum, GLsizei, const void*)' redeclared as different kind of entity
 1120 | GL_APICALL void GL_APIENTRY glVertexAttribIPointer (GLuint index, GLint size, GLenum type, GLsizei stride, const void *pointer);
      |                                                                                                                               ^
/usr/include/GL/glew.h:22556:47: note: previous declaration 'void (* __glewVertexAttribIPointer)(GLuint, GLint, GLenum, GLsizei, const void*)'
22556 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBIPOINTERPROC __glewVertexAttribIPointer;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1121:92: error: 'void __glewGetVertexAttribIiv(GLuint, GLenum, GLint*)' redeclared as different kind of entity
 1121 | GL_APICALL void GL_APIENTRY glGetVertexAttribIiv (GLuint index, GLenum pname, GLint *params);
      |                                                                                            ^
/usr/include/GL/glew.h:22522:45: note: previous declaration 'void (* __glewGetVertexAttribIiv)(GLuint, GLenum, GLint*)'
22522 | GLEW_FUN_EXPORT PFNGLGETVERTEXATTRIBIIVPROC __glewGetVertexAttribIiv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1122:94: error: 'void __glewGetVertexAttribIuiv(GLuint, GLenum, GLuint*)' redeclared as different kind of entity
 1122 | GL_APICALL void GL_APIENTRY glGetVertexAttribIuiv (GLuint index, GLenum pname, GLuint *params);
      |                                                                                              ^
/usr/include/GL/glew.h:22523:46: note: previous declaration 'void (* __glewGetVertexAttribIuiv)(GLuint, GLenum, GLuint*)'
22523 | GLEW_FUN_EXPORT PFNGLGETVERTEXATTRIBIUIVPROC __glewGetVertexAttribIuiv;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1123:96: error: 'void __glewVertexAttribI4i(GLuint, GLint, GLint, GLint, GLint)' redeclared as different kind of entity
 1123 | GL_APICALL void GL_APIENTRY glVertexAttribI4i (GLuint index, GLint x, GLint y, GLint z, GLint w);
      |                                                                                                ^
/usr/include/GL/glew.h:22549:42: note: previous declaration 'void (* __glewVertexAttribI4i)(GLuint, GLint, GLint, GLint, GLint)'
22549 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBI4IPROC __glewVertexAttribI4i;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1124:101: error: 'void __glewVertexAttribI4ui(GLuint, GLuint, GLuint, GLuint, GLuint)' redeclared as different kind of entity
 1124 | GL_APICALL void GL_APIENTRY glVertexAttribI4ui (GLuint index, GLuint x, GLuint y, GLuint z, GLuint w);
      |                                                                                                     ^
/usr/include/GL/glew.h:22553:43: note: previous declaration 'void (* __glewVertexAttribI4ui)(GLuint, GLuint, GLuint, GLuint, GLuint)'
22553 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBI4UIPROC __glewVertexAttribI4ui;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1125:77: error: 'void __glewVertexAttribI4iv(GLuint, const GLint*)' redeclared as different kind of entity
 1125 | GL_APICALL void GL_APIENTRY glVertexAttribI4iv (GLuint index, const GLint *v);
      |                                                                             ^
/usr/include/GL/glew.h:22550:43: note: previous declaration 'void (* __glewVertexAttribI4iv)(GLuint, const GLint*)'
22550 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBI4IVPROC __glewVertexAttribI4iv;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1126:79: error: 'void __glewVertexAttribI4uiv(GLuint, const GLuint*)' redeclared as different kind of entity
 1126 | GL_APICALL void GL_APIENTRY glVertexAttribI4uiv (GLuint index, const GLuint *v);
      |                                                                               ^
/usr/include/GL/glew.h:22554:44: note: previous declaration 'void (* __glewVertexAttribI4uiv)(GLuint, const GLuint*)'
22554 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBI4UIVPROC __glewVertexAttribI4uiv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1127:92: error: 'void __glewGetUniformuiv(GLuint, GLint, GLuint*)' redeclared as different kind of entity
 1127 | GL_APICALL void GL_APIENTRY glGetUniformuiv (GLuint program, GLint location, GLuint *params);
      |                                                                                            ^
/usr/include/GL/glew.h:22521:40: note: previous declaration 'void (* __glewGetUniformuiv)(GLuint, GLint, GLuint*)'
22521 | GLEW_FUN_EXPORT PFNGLGETUNIFORMUIVPROC __glewGetUniformuiv;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1128:87: error: 'GLint __glewGetFragDataLocation(GLuint, const GLchar*)' redeclared as different kind of entity
 1128 | GL_APICALL GLint GL_APIENTRY glGetFragDataLocation (GLuint program, const GLchar *name);
      |                                                                                       ^
/usr/include/GL/glew.h:22516:46: note: previous declaration 'GLint (* __glewGetFragDataLocation)(GLuint, const GLchar*)'
22516 | GLEW_FUN_EXPORT PFNGLGETFRAGDATALOCATIONPROC __glewGetFragDataLocation;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1129:68: error: 'void __glewUniform1ui(GLint, GLuint)' redeclared as different kind of entity
 1129 | GL_APICALL void GL_APIENTRY glUniform1ui (GLint location, GLuint v0);
      |                                                                    ^
/usr/include/GL/glew.h:22528:37: note: previous declaration 'void (* __glewUniform1ui)(GLint, GLuint)'
22528 | GLEW_FUN_EXPORT PFNGLUNIFORM1UIPROC __glewUniform1ui;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1130:79: error: 'void __glewUniform2ui(GLint, GLuint, GLuint)' redeclared as different kind of entity
 1130 | GL_APICALL void GL_APIENTRY glUniform2ui (GLint location, GLuint v0, GLuint v1);
      |                                                                               ^
/usr/include/GL/glew.h:22530:37: note: previous declaration 'void (* __glewUniform2ui)(GLint, GLuint, GLuint)'
22530 | GLEW_FUN_EXPORT PFNGLUNIFORM2UIPROC __glewUniform2ui;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1131:90: error: 'void __glewUniform3ui(GLint, GLuint, GLuint, GLuint)' redeclared as different kind of entity
 1131 | GL_APICALL void GL_APIENTRY glUniform3ui (GLint location, GLuint v0, GLuint v1, GLuint v2);
      |                                                                                          ^
/usr/include/GL/glew.h:22532:37: note: previous declaration 'void (* __glewUniform3ui)(GLint, GLuint, GLuint, GLuint)'
22532 | GLEW_FUN_EXPORT PFNGLUNIFORM3UIPROC __glewUniform3ui;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1132:101: error: 'void __glewUniform4ui(GLint, GLuint, GLuint, GLuint, GLuint)' redeclared as different kind of entity
 1132 | GL_APICALL void GL_APIENTRY glUniform4ui (GLint location, GLuint v0, GLuint v1, GLuint v2, GLuint v3);
      |                                                                                                     ^
/usr/include/GL/glew.h:22534:37: note: previous declaration 'void (* __glewUniform4ui)(GLint, GLuint, GLuint, GLuint, GLuint)'
22534 | GLEW_FUN_EXPORT PFNGLUNIFORM4UIPROC __glewUniform4ui;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1133:94: error: 'void __glewUniform1uiv(GLint, GLsizei, const GLuint*)' redeclared as different kind of entity
 1133 | GL_APICALL void GL_APIENTRY glUniform1uiv (GLint location, GLsizei count, const GLuint *value);
      |                                                                                              ^
/usr/include/GL/glew.h:22529:38: note: previous declaration 'void (* __glewUniform1uiv)(GLint, GLsizei, const GLuint*)'
22529 | GLEW_FUN_EXPORT PFNGLUNIFORM1UIVPROC __glewUniform1uiv;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1134:94: error: 'void __glewUniform2uiv(GLint, GLsizei, const GLuint*)' redeclared as different kind of entity
 1134 | GL_APICALL void GL_APIENTRY glUniform2uiv (GLint location, GLsizei count, const GLuint *value);
      |                                                                                              ^
/usr/include/GL/glew.h:22531:38: note: previous declaration 'void (* __glewUniform2uiv)(GLint, GLsizei, const GLuint*)'
22531 | GLEW_FUN_EXPORT PFNGLUNIFORM2UIVPROC __glewUniform2uiv;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1135:94: error: 'void __glewUniform3uiv(GLint, GLsizei, const GLuint*)' redeclared as different kind of entity
 1135 | GL_APICALL void GL_APIENTRY glUniform3uiv (GLint location, GLsizei count, const GLuint *value);
      |                                                                                              ^
/usr/include/GL/glew.h:22533:38: note: previous declaration 'void (* __glewUniform3uiv)(GLint, GLsizei, const GLuint*)'
22533 | GLEW_FUN_EXPORT PFNGLUNIFORM3UIVPROC __glewUniform3uiv;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1136:94: error: 'void __glewUniform4uiv(GLint, GLsizei, const GLuint*)' redeclared as different kind of entity
 1136 | GL_APICALL void GL_APIENTRY glUniform4uiv (GLint location, GLsizei count, const GLuint *value);
      |                                                                                              ^
/usr/include/GL/glew.h:22535:38: note: previous declaration 'void (* __glewUniform4uiv)(GLint, GLsizei, const GLuint*)'
22535 | GLEW_FUN_EXPORT PFNGLUNIFORM4UIVPROC __glewUniform4uiv;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1137:97: error: 'void __glewClearBufferiv(GLenum, GLint, const GLint*)' redeclared as different kind of entity
 1137 | GL_APICALL void GL_APIENTRY glClearBufferiv (GLenum buffer, GLint drawbuffer, const GLint *value);
      |                                                                                                 ^
/usr/include/GL/glew.h:22508:40: note: previous declaration 'void (* __glewClearBufferiv)(GLenum, GLint, const GLint*)'
22508 | GLEW_FUN_EXPORT PFNGLCLEARBUFFERIVPROC __glewClearBufferiv;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1138:99: error: 'void __glewClearBufferuiv(GLenum, GLint, const GLuint*)' redeclared as different kind of entity
 1138 | GL_APICALL void GL_APIENTRY glClearBufferuiv (GLenum buffer, GLint drawbuffer, const GLuint *value);
      |                                                                                                   ^
/usr/include/GL/glew.h:22509:41: note: previous declaration 'void (* __glewClearBufferuiv)(GLenum, GLint, const GLuint*)'
22509 | GLEW_FUN_EXPORT PFNGLCLEARBUFFERUIVPROC __glewClearBufferuiv;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1139:99: error: 'void __glewClearBufferfv(GLenum, GLint, const GLfloat*)' redeclared as different kind of entity
 1139 | GL_APICALL void GL_APIENTRY glClearBufferfv (GLenum buffer, GLint drawbuffer, const GLfloat *value);
      |                                                                                                   ^
/usr/include/GL/glew.h:22507:40: note: previous declaration 'void (* __glewClearBufferfv)(GLenum, GLint, const GLfloat*)'
22507 | GLEW_FUN_EXPORT PFNGLCLEARBUFFERFVPROC __glewClearBufferfv;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1140:107: error: 'void __glewClearBufferfi(GLenum, GLint, GLfloat, GLint)' redeclared as different kind of entity
 1140 | GL_APICALL void GL_APIENTRY glClearBufferfi (GLenum buffer, GLint drawbuffer, GLfloat depth, GLint stencil);
      |                                                                                                           ^
/usr/include/GL/glew.h:22506:40: note: previous declaration 'void (* __glewClearBufferfi)(GLenum, GLint, GLfloat, GLint)'
22506 | GLEW_FUN_EXPORT PFNGLCLEARBUFFERFIPROC __glewClearBufferfi;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1141:78: error: 'const GLubyte* __glewGetStringi(GLenum, GLuint)' redeclared as different kind of entity
 1141 | GL_APICALL const GLubyte *GL_APIENTRY glGetStringi (GLenum name, GLuint index);
      |                                                                              ^
/usr/include/GL/glew.h:22517:37: note: previous declaration 'const GLubyte* (* __glewGetStringi)(GLenum, GLuint)'
22517 | GLEW_FUN_EXPORT PFNGLGETSTRINGIPROC __glewGetStringi;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1142:147: error: 'void __glewCopyBufferSubData(GLenum, GLenum, GLintptr, GLintptr, GLsizeiptr)' redeclared as different kind of entity
 1142 | GL_APICALL void GL_APIENTRY glCopyBufferSubData (GLenum readTarget, GLenum writeTarget, GLintptr readOffset, GLintptr writeOffset, GLsizeiptr size);
      |                                                                                                                                                   ^
/usr/include/GL/glew.h:22769:44: note: previous declaration 'void (* __glewCopyBufferSubData)(GLenum, GLenum, GLintptr, GLintptr, GLsizeiptr)'
22769 | GLEW_FUN_EXPORT PFNGLCOPYBUFFERSUBDATAPROC __glewCopyBufferSubData;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1143:144: error: 'void __glewGetUniformIndices(GLuint, GLsizei, const GLchar* const*, GLuint*)' redeclared as different kind of entity
 1143 | GL_APICALL void GL_APIENTRY glGetUniformIndices (GLuint program, GLsizei uniformCount, const GLchar *const*uniformNames, GLuint *uniformIndices);
      |                                                                                                                                                ^
/usr/include/GL/glew.h:23363:44: note: previous declaration 'void (* __glewGetUniformIndices)(GLuint, GLsizei, const GLchar* const*, GLuint*)'
23363 | GLEW_FUN_EXPORT PFNGLGETUNIFORMINDICESPROC __glewGetUniformIndices;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1144:147: error: 'void __glewGetActiveUniformsiv(GLuint, GLsizei, const GLuint*, GLenum, GLint*)' redeclared as different kind of entity
 1144 | GL_APICALL void GL_APIENTRY glGetActiveUniformsiv (GLuint program, GLsizei uniformCount, const GLuint *uniformIndices, GLenum pname, GLint *params);
      |                                                                                                                                                   ^
/usr/include/GL/glew.h:23360:46: note: previous declaration 'void (* __glewGetActiveUniformsiv)(GLuint, GLsizei, const GLuint*, GLenum, GLint*)'
23360 | GLEW_FUN_EXPORT PFNGLGETACTIVEUNIFORMSIVPROC __glewGetActiveUniformsiv;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1145:101: error: 'GLuint __glewGetUniformBlockIndex(GLuint, const GLchar*)' redeclared as different kind of entity
 1145 | GL_APICALL GLuint GL_APIENTRY glGetUniformBlockIndex (GLuint program, const GLchar *uniformBlockName);
      |                                                                                                     ^
/usr/include/GL/glew.h:23362:47: note: previous declaration 'GLuint (* __glewGetUniformBlockIndex)(GLuint, const GLchar*)'
23362 | GLEW_FUN_EXPORT PFNGLGETUNIFORMBLOCKINDEXPROC __glewGetUniformBlockIndex;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1146:125: error: 'void __glewGetActiveUniformBlockiv(GLuint, GLuint, GLenum, GLint*)' redeclared as different kind of entity
 1146 | GL_APICALL void GL_APIENTRY glGetActiveUniformBlockiv (GLuint program, GLuint uniformBlockIndex, GLenum pname, GLint *params);
      |                                                                                                                             ^
/usr/include/GL/glew.h:23358:50: note: previous declaration 'void (* __glewGetActiveUniformBlockiv)(GLuint, GLuint, GLenum, GLint*)'
23358 | GLEW_FUN_EXPORT PFNGLGETACTIVEUNIFORMBLOCKIVPROC __glewGetActiveUniformBlockiv;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1147:158: error: 'void __glewGetActiveUniformBlockName(GLuint, GLuint, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of entity
 1147 | GL_APICALL void GL_APIENTRY glGetActiveUniformBlockName (GLuint program, GLuint uniformBlockIndex, GLsizei bufSize, GLsizei *length, GLchar *uniformBlockName);
      |                                                                                                                                                              ^
/usr/include/GL/glew.h:23357:52: note: previous declaration 'void (* __glewGetActiveUniformBlockName)(GLuint, GLuint, GLsizei, GLsizei*, GLchar*)'
23357 | GLEW_FUN_EXPORT PFNGLGETACTIVEUNIFORMBLOCKNAMEPROC __glewGetActiveUniformBlockName;
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1148:120: error: 'void __glewUniformBlockBinding(GLuint, GLuint, GLuint)' redeclared as different kind of entity
 1148 | GL_APICALL void GL_APIENTRY glUniformBlockBinding (GLuint program, GLuint uniformBlockIndex, GLuint uniformBlockBinding);
      |                                                                                                                        ^
/usr/include/GL/glew.h:23364:46: note: previous declaration 'void (* __glewUniformBlockBinding)(GLuint, GLuint, GLuint)'
23364 | GLEW_FUN_EXPORT PFNGLUNIFORMBLOCKBINDINGPROC __glewUniformBlockBinding;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1149:114: error: 'void __glewDrawArraysInstanced(GLenum, GLint, GLsizei, GLsizei)' redeclared as different kind of entity
 1149 | GL_APICALL void GL_APIENTRY glDrawArraysInstanced (GLenum mode, GLint first, GLsizei count, GLsizei instancecount);
      |                                                                                                                  ^
/usr/include/GL/glew.h:22558:46: note: previous declaration 'void (* __glewDrawArraysInstanced)(GLenum, GLint, GLsizei, GLsizei)'
22558 | GLEW_FUN_EXPORT PFNGLDRAWARRAYSINSTANCEDPROC __glewDrawArraysInstanced;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1150:137: error: 'void __glewDrawElementsInstanced(GLenum, GLsizei, GLenum, const void*, GLsizei)' redeclared as different kind of entity
 1150 | GL_APICALL void GL_APIENTRY glDrawElementsInstanced (GLenum mode, GLsizei count, GLenum type, const void *indices, GLsizei instancecount);
      |                                                                                                                                         ^
/usr/include/GL/glew.h:22559:48: note: previous declaration 'void (* __glewDrawElementsInstanced)(GLenum, GLsizei, GLenum, const void*, GLsizei)'
22559 | GLEW_FUN_EXPORT PFNGLDRAWELEMENTSINSTANCEDPROC __glewDrawElementsInstanced;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1151:78: error: '__GLsync* __glewFenceSync(GLenum, GLbitfield)' redeclared as different kind of entity
 1151 | GL_APICALL GLsync GL_APIENTRY glFenceSync (GLenum condition, GLbitfield flags);
      |                                                                              ^
/usr/include/GL/glew.h:23290:36: note: previous declaration '__GLsync* (* __glewFenceSync)(GLenum, GLbitfield)'
23290 | GLEW_FUN_EXPORT PFNGLFENCESYNCPROC __glewFenceSync;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1152:55: error: 'GLboolean __glewIsSync(GLsync)' redeclared as different kind of entity
 1152 | GL_APICALL GLboolean GL_APIENTRY glIsSync (GLsync sync);
      |                                                       ^
/usr/include/GL/glew.h:23293:33: note: previous declaration 'GLboolean (* __glewIsSync)(GLsync)'
23293 | GLEW_FUN_EXPORT PFNGLISSYNCPROC __glewIsSync;
      |                                 ^~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1153:54: error: 'void __glewDeleteSync(GLsync)' redeclared as different kind of entity
 1153 | GL_APICALL void GL_APIENTRY glDeleteSync (GLsync sync);
      |                                                      ^
/usr/include/GL/glew.h:23289:37: note: previous declaration 'void (* __glewDeleteSync)(GLsync)'
23289 | GLEW_FUN_EXPORT PFNGLDELETESYNCPROC __glewDeleteSync;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1154:96: error: 'GLenum __glewClientWaitSync(GLsync, GLbitfield, GLuint64)' redeclared as different kind of entity
 1154 | GL_APICALL GLenum GL_APIENTRY glClientWaitSync (GLsync sync, GLbitfield flags, GLuint64 timeout);
      |                                                                                                ^
/usr/include/GL/glew.h:23288:41: note: previous declaration 'GLenum (* __glewClientWaitSync)(GLsync, GLbitfield, GLuint64)'
23288 | GLEW_FUN_EXPORT PFNGLCLIENTWAITSYNCPROC __glewClientWaitSync;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1155:88: error: 'void __glewWaitSync(GLsync, GLbitfield, GLuint64)' redeclared as different kind of entity
 1155 | GL_APICALL void GL_APIENTRY glWaitSync (GLsync sync, GLbitfield flags, GLuint64 timeout);
      |                                                                                        ^
/usr/include/GL/glew.h:23294:35: note: previous declaration 'void (* __glewWaitSync)(GLsync, GLbitfield, GLuint64)'
23294 | GLEW_FUN_EXPORT PFNGLWAITSYNCPROC __glewWaitSync;
      |                                   ^~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1156:73: error: 'void __glewGetInteger64v(GLenum, GLint64*)' redeclared as different kind of entity
 1156 | GL_APICALL void GL_APIENTRY glGetInteger64v (GLenum pname, GLint64 *data);
      |                                                                         ^
/usr/include/GL/glew.h:23291:40: note: previous declaration 'void (* __glewGetInteger64v)(GLenum, GLint64*)'
23291 | GLEW_FUN_EXPORT PFNGLGETINTEGER64VPROC __glewGetInteger64v;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1157:116: error: 'void __glewGetSynciv(GLsync, GLenum, GLsizei, GLsizei*, GLint*)' redeclared as different kind of entity
 1157 | GL_APICALL void GL_APIENTRY glGetSynciv (GLsync sync, GLenum pname, GLsizei bufSize, GLsizei *length, GLint *values);
      |                                                                                                                    ^
/usr/include/GL/glew.h:23292:36: note: previous declaration 'void (* __glewGetSynciv)(GLsync, GLenum, GLsizei, GLsizei*, GLint*)'
23292 | GLEW_FUN_EXPORT PFNGLGETSYNCIVPROC __glewGetSynciv;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1158:90: error: 'void __glewGetInteger64i_v(GLenum, GLuint, GLint64*)' redeclared as different kind of entity
 1158 | GL_APICALL void GL_APIENTRY glGetInteger64i_v (GLenum target, GLuint index, GLint64 *data);
      |                                                                                          ^
/usr/include/GL/glew.h:22565:42: note: previous declaration 'void (* __glewGetInteger64i_v)(GLenum, GLuint, GLint64*)'
22565 | GLEW_FUN_EXPORT PFNGLGETINTEGER64I_VPROC __glewGetInteger64i_v;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1159:99: error: 'void __glewGetBufferParameteri64v(GLenum, GLenum, GLint64*)' redeclared as different kind of entity
 1159 | GL_APICALL void GL_APIENTRY glGetBufferParameteri64v (GLenum target, GLenum pname, GLint64 *params);
      |                                                                                                   ^
/usr/include/GL/glew.h:22564:49: note: previous declaration 'void (* __glewGetBufferParameteri64v)(GLenum, GLenum, GLint64*)'
22564 | GLEW_FUN_EXPORT PFNGLGETBUFFERPARAMETERI64VPROC __glewGetBufferParameteri64v;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1160:75: error: 'void __glewGenSamplers(GLsizei, GLuint*)' redeclared as different kind of entity
 1160 | GL_APICALL void GL_APIENTRY glGenSamplers (GLsizei count, GLuint *samplers);
      |                                                                           ^
/usr/include/GL/glew.h:23147:38: note: previous declaration 'void (* __glewGenSamplers)(GLsizei, GLuint*)'
23147 | GLEW_FUN_EXPORT PFNGLGENSAMPLERSPROC __glewGenSamplers;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1161:84: error: 'void __glewDeleteSamplers(GLsizei, const GLuint*)' redeclared as different kind of entity
 1161 | GL_APICALL void GL_APIENTRY glDeleteSamplers (GLsizei count, const GLuint *samplers);
      |                                                                                    ^
/usr/include/GL/glew.h:23146:41: note: previous declaration 'void (* __glewDeleteSamplers)(GLsizei, const GLuint*)'
23146 | GLEW_FUN_EXPORT PFNGLDELETESAMPLERSPROC __glewDeleteSamplers;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1162:61: error: 'GLboolean __glewIsSampler(GLuint)' redeclared as different kind of entity
 1162 | GL_APICALL GLboolean GL_APIENTRY glIsSampler (GLuint sampler);
      |                                                             ^
/usr/include/GL/glew.h:23152:36: note: previous declaration 'GLboolean (* __glewIsSampler)(GLuint)'
23152 | GLEW_FUN_EXPORT PFNGLISSAMPLERPROC __glewIsSampler;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1163:71: error: 'void __glewBindSampler(GLuint, GLuint)' redeclared as different kind of entity
 1163 | GL_APICALL void GL_APIENTRY glBindSampler (GLuint unit, GLuint sampler);
      |                                                                       ^
/usr/include/GL/glew.h:23145:38: note: previous declaration 'void (* __glewBindSampler)(GLuint, GLuint)'
23145 | GLEW_FUN_EXPORT PFNGLBINDSAMPLERPROC __glewBindSampler;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1164:91: error: 'void __glewSamplerParameteri(GLuint, GLenum, GLint)' redeclared as different kind of entity
 1164 | GL_APICALL void GL_APIENTRY glSamplerParameteri (GLuint sampler, GLenum pname, GLint param);
      |                                                                                           ^
/usr/include/GL/glew.h:23157:44: note: previous declaration 'void (* __glewSamplerParameteri)(GLuint, GLenum, GLint)'
23157 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERIPROC __glewSamplerParameteri;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1165:99: error: 'void __glewSamplerParameteriv(GLuint, GLenum, const GLint*)' redeclared as different kind of entity
 1165 | GL_APICALL void GL_APIENTRY glSamplerParameteriv (GLuint sampler, GLenum pname, const GLint *param);
      |                                                                                                   ^
/usr/include/GL/glew.h:23158:45: note: previous declaration 'void (* __glewSamplerParameteriv)(GLuint, GLenum, const GLint*)'
23158 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERIVPROC __glewSamplerParameteriv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1166:93: error: 'void __glewSamplerParameterf(GLuint, GLenum, GLfloat)' redeclared as different kind of entity
 1166 | GL_APICALL void GL_APIENTRY glSamplerParameterf (GLuint sampler, GLenum pname, GLfloat param);
      |                                                                                             ^
/usr/include/GL/glew.h:23155:44: note: previous declaration 'void (* __glewSamplerParameterf)(GLuint, GLenum, GLfloat)'
23155 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERFPROC __glewSamplerParameterf;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1167:101: error: 'void __glewSamplerParameterfv(GLuint, GLenum, const GLfloat*)' redeclared as different kind of entity
 1167 | GL_APICALL void GL_APIENTRY glSamplerParameterfv (GLuint sampler, GLenum pname, const GLfloat *param);
      |                                                                                                     ^
/usr/include/GL/glew.h:23156:45: note: previous declaration 'void (* __glewSamplerParameterfv)(GLuint, GLenum, const GLfloat*)'
23156 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERFVPROC __glewSamplerParameterfv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1168:97: error: 'void __glewGetSamplerParameteriv(GLuint, GLenum, GLint*)' redeclared as different kind of entity
 1168 | GL_APICALL void GL_APIENTRY glGetSamplerParameteriv (GLuint sampler, GLenum pname, GLint *params);
      |                                                                                                 ^
/usr/include/GL/glew.h:23151:48: note: previous declaration 'void (* __glewGetSamplerParameteriv)(GLuint, GLenum, GLint*)'
23151 | GLEW_FUN_EXPORT PFNGLGETSAMPLERPARAMETERIVPROC __glewGetSamplerParameteriv;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1169:99: error: 'void __glewGetSamplerParameterfv(GLuint, GLenum, GLfloat*)' redeclared as different kind of entity
 1169 | GL_APICALL void GL_APIENTRY glGetSamplerParameterfv (GLuint sampler, GLenum pname, GLfloat *params);
      |                                                                                                   ^
/usr/include/GL/glew.h:23150:48: note: previous declaration 'void (* __glewGetSamplerParameterfv)(GLuint, GLenum, GLfloat*)'
23150 | GLEW_FUN_EXPORT PFNGLGETSAMPLERPARAMETERFVPROC __glewGetSamplerParameterfv;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1170:80: error: 'void __glewVertexAttribDivisor(GLuint, GLuint)' redeclared as different kind of entity
 1170 | GL_APICALL void GL_APIENTRY glVertexAttribDivisor (GLuint index, GLuint divisor);
      |                                                                                ^
/usr/include/GL/glew.h:22567:46: note: previous declaration 'void (* __glewVertexAttribDivisor)(GLuint, GLuint)'
22567 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBDIVISORPROC __glewVertexAttribDivisor;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1171:78: error: 'void __glewBindTransformFeedback(GLenum, GLuint)' redeclared as different kind of entity
 1171 | GL_APICALL void GL_APIENTRY glBindTransformFeedback (GLenum target, GLuint id);
      |                                                                              ^
/usr/include/GL/glew.h:23334:48: note: previous declaration 'void (* __glewBindTransformFeedback)(GLenum, GLuint)'
23334 | GLEW_FUN_EXPORT PFNGLBINDTRANSFORMFEEDBACKPROC __glewBindTransformFeedback;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1172:85: error: 'void __glewDeleteTransformFeedbacks(GLsizei, const GLuint*)' redeclared as different kind of entity
 1172 | GL_APICALL void GL_APIENTRY glDeleteTransformFeedbacks (GLsizei n, const GLuint *ids);
      |                                                                                     ^
/usr/include/GL/glew.h:23335:51: note: previous declaration 'void (* __glewDeleteTransformFeedbacks)(GLsizei, const GLuint*)'
23335 | GLEW_FUN_EXPORT PFNGLDELETETRANSFORMFEEDBACKSPROC __glewDeleteTransformFeedbacks;
      |                                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1173:76: error: 'void __glewGenTransformFeedbacks(GLsizei, GLuint*)' redeclared as different kind of entity
 1173 | GL_APICALL void GL_APIENTRY glGenTransformFeedbacks (GLsizei n, GLuint *ids);
      |                                                                            ^
/usr/include/GL/glew.h:23337:48: note: previous declaration 'void (* __glewGenTransformFeedbacks)(GLsizei, GLuint*)'
23337 | GLEW_FUN_EXPORT PFNGLGENTRANSFORMFEEDBACKSPROC __glewGenTransformFeedbacks;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1174:66: error: 'GLboolean __glewIsTransformFeedback(GLuint)' redeclared as different kind of entity
 1174 | GL_APICALL GLboolean GL_APIENTRY glIsTransformFeedback (GLuint id);
      |                                                                  ^
/usr/include/GL/glew.h:23338:46: note: previous declaration 'GLboolean (* __glewIsTransformFeedback)(GLuint)'
23338 | GLEW_FUN_EXPORT PFNGLISTRANSFORMFEEDBACKPROC __glewIsTransformFeedback;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1175:59: error: 'void __glewPauseTransformFeedback()' redeclared as different kind of entity
 1175 | GL_APICALL void GL_APIENTRY glPauseTransformFeedback (void);
      |                                                           ^
/usr/include/GL/glew.h:23339:49: note: previous declaration 'void (* __glewPauseTransformFeedback)()'
23339 | GLEW_FUN_EXPORT PFNGLPAUSETRANSFORMFEEDBACKPROC __glewPauseTransformFeedback;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1176:60: error: 'void __glewResumeTransformFeedback()' redeclared as different kind of entity
 1176 | GL_APICALL void GL_APIENTRY glResumeTransformFeedback (void);
      |                                                            ^
/usr/include/GL/glew.h:23340:50: note: previous declaration 'void (* __glewResumeTransformFeedback)()'
23340 | GLEW_FUN_EXPORT PFNGLRESUMETRANSFORMFEEDBACKPROC __glewResumeTransformFeedback;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1177:133: error: 'void __glewGetProgramBinary(GLuint, GLsizei, GLsizei*, GLenum*, void*)' redeclared as different kind of entity
 1177 | GL_APICALL void GL_APIENTRY glGetProgramBinary (GLuint program, GLsizei bufSize, GLsizei *length, GLenum *binaryFormat, void *binary);
      |                                                                                                                                     ^
/usr/include/GL/glew.h:22922:43: note: previous declaration 'void (* __glewGetProgramBinary)(GLuint, GLsizei, GLsizei*, GLenum*, void*)'
22922 | GLEW_FUN_EXPORT PFNGLGETPROGRAMBINARYPROC __glewGetProgramBinary;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1178:117: error: 'void __glewProgramBinary(GLuint, GLenum, const void*, GLsizei)' redeclared as different kind of entity
 1178 | GL_APICALL void GL_APIENTRY glProgramBinary (GLuint program, GLenum binaryFormat, const void *binary, GLsizei length);
      |                                                                                                                     ^
/usr/include/GL/glew.h:22923:40: note: previous declaration 'void (* __glewProgramBinary)(GLuint, GLenum, const void*, GLsizei)'
22923 | GLEW_FUN_EXPORT PFNGLPROGRAMBINARYPROC __glewProgramBinary;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1179:91: error: 'void __glewProgramParameteri(GLuint, GLenum, GLint)' redeclared as different kind of entity
 1179 | GL_APICALL void GL_APIENTRY glProgramParameteri (GLuint program, GLenum pname, GLint value);
      |                                                                                           ^
/usr/include/GL/glew.h:22924:44: note: previous declaration 'void (* __glewProgramParameteri)(GLuint, GLenum, GLint)'
22924 | GLEW_FUN_EXPORT PFNGLPROGRAMPARAMETERIPROC __glewProgramParameteri;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1180:118: error: 'void __glewInvalidateFramebuffer(GLenum, GLsizei, const GLenum*)' redeclared as different kind of entity
 1180 | GL_APICALL void GL_APIENTRY glInvalidateFramebuffer (GLenum target, GLsizei numAttachments, const GLenum *attachments);
      |                                                                                                                      ^
/usr/include/GL/glew.h:23033:48: note: previous declaration 'void (* __glewInvalidateFramebuffer)(GLenum, GLsizei, const GLenum*)'
23033 | GLEW_FUN_EXPORT PFNGLINVALIDATEFRAMEBUFFERPROC __glewInvalidateFramebuffer;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1181:170: error: 'void __glewInvalidateSubFramebuffer(GLenum, GLsizei, const GLenum*, GLint, GLint, GLsizei, GLsizei)' redeclared as different kind of entity
 1181 | GL_APICALL void GL_APIENTRY glInvalidateSubFramebuffer (GLenum target, GLsizei numAttachments, const GLenum *attachments, GLint x, GLint y, GLsizei width, GLsizei height);
      |                                                                                                                                                                          ^
/usr/include/GL/glew.h:23034:51: note: previous declaration 'void (* __glewInvalidateSubFramebuffer)(GLenum, GLsizei, const GLenum*, GLint, GLint, GLsizei, GLsizei)'
23034 | GLEW_FUN_EXPORT PFNGLINVALIDATESUBFRAMEBUFFERPROC __glewInvalidateSubFramebuffer;
      |                                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1182:128: error: 'void __glewTexStorage2D(GLenum, GLsizei, GLenum, GLsizei, GLsizei)' redeclared as different kind of entity
 1182 | GL_APICALL void GL_APIENTRY glTexStorage2D (GLenum target, GLsizei levels, GLenum internalformat, GLsizei width, GLsizei height);
      |                                                                                                                                ^
/usr/include/GL/glew.h:23320:39: note: previous declaration 'void (* __glewTexStorage2D)(GLenum, GLsizei, GLenum, GLsizei, GLsizei)'
23320 | GLEW_FUN_EXPORT PFNGLTEXSTORAGE2DPROC __glewTexStorage2D;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1183:143: error: 'void __glewTexStorage3D(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLsizei)' redeclared as different kind of entity
 1183 | GL_APICALL void GL_APIENTRY glTexStorage3D (GLenum target, GLsizei levels, GLenum internalformat, GLsizei width, GLsizei height, GLsizei depth);
      |                                                                                                                                               ^
/usr/include/GL/glew.h:23321:39: note: previous declaration 'void (* __glewTexStorage3D)(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLsizei)'
23321 | GLEW_FUN_EXPORT PFNGLTEXSTORAGE3DPROC __glewTexStorage3D;
      |                                       ^~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1184:134: error: 'void __glewGetInternalformativ(GLenum, GLenum, GLenum, GLsizei, GLint*)' redeclared as different kind of entity
 1184 | GL_APICALL void GL_APIENTRY glGetInternalformativ (GLenum target, GLenum internalformat, GLenum pname, GLsizei bufSize, GLint *params);
      |                                                                                                                                      ^
/usr/include/GL/glew.h:23027:46: note: previous declaration 'void (* __glewGetInternalformativ)(GLenum, GLenum, GLenum, GLsizei, GLint*)'
23027 | GLEW_FUN_EXPORT PFNGLGETINTERNALFORMATIVPROC __glewGetInternalformativ;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1432:109: error: 'void __glewDispatchCompute(GLuint, GLuint, GLuint)' redeclared as different kind of entity
 1432 | GL_APICALL void GL_APIENTRY glDispatchCompute (GLuint num_groups_x, GLuint num_groups_y, GLuint num_groups_z);
      |                                                                                                             ^
/usr/include/GL/glew.h:22764:42: note: previous declaration 'void (* __glewDispatchCompute)(GLuint, GLuint, GLuint)'
22764 | GLEW_FUN_EXPORT PFNGLDISPATCHCOMPUTEPROC __glewDispatchCompute;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1433:73: error: 'void __glewDispatchComputeIndirect(GLintptr)' redeclared as different kind of entity
 1433 | GL_APICALL void GL_APIENTRY glDispatchComputeIndirect (GLintptr indirect);
      |                                                                         ^
/usr/include/GL/glew.h:22765:50: note: previous declaration 'void (* __glewDispatchComputeIndirect)(GLintptr)'
22765 | GLEW_FUN_EXPORT PFNGLDISPATCHCOMPUTEINDIRECTPROC __glewDispatchComputeIndirect;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1434:84: error: 'void __glewDrawArraysIndirect(GLenum, const void*)' redeclared as different kind of entity
 1434 | GL_APICALL void GL_APIENTRY glDrawArraysIndirect (GLenum mode, const void *indirect);
      |                                                                                    ^
/usr/include/GL/glew.h:22888:45: note: previous declaration 'void (* __glewDrawArraysIndirect)(GLenum, const void*)'
22888 | GLEW_FUN_EXPORT PFNGLDRAWARRAYSINDIRECTPROC __glewDrawArraysIndirect;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1435:99: error: 'void __glewDrawElementsIndirect(GLenum, GLenum, const void*)' redeclared as different kind of entity
 1435 | GL_APICALL void GL_APIENTRY glDrawElementsIndirect (GLenum mode, GLenum type, const void *indirect);
      |                                                                                                   ^
/usr/include/GL/glew.h:22889:47: note: previous declaration 'void (* __glewDrawElementsIndirect)(GLenum, GLenum, const void*)'
22889 | GLEW_FUN_EXPORT PFNGLDRAWELEMENTSINDIRECTPROC __glewDrawElementsIndirect;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1436:94: error: 'void __glewFramebufferParameteri(GLenum, GLenum, GLint)' redeclared as different kind of entity
 1436 | GL_APICALL void GL_APIENTRY glFramebufferParameteri (GLenum target, GLenum pname, GLint param);
      |                                                                                              ^
/usr/include/GL/glew.h:22891:48: note: previous declaration 'void (* __glewFramebufferParameteri)(GLenum, GLenum, GLint)'
22891 | GLEW_FUN_EXPORT PFNGLFRAMEBUFFERPARAMETERIPROC __glewFramebufferParameteri;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1437:100: error: 'void __glewGetFramebufferParameteriv(GLenum, GLenum, GLint*)' redeclared as different kind of entity
 1437 | GL_APICALL void GL_APIENTRY glGetFramebufferParameteriv (GLenum target, GLenum pname, GLint *params);
      |                                                                                                    ^
/usr/include/GL/glew.h:22892:52: note: previous declaration 'void (* __glewGetFramebufferParameteriv)(GLenum, GLenum, GLint*)'
22892 | GLEW_FUN_EXPORT PFNGLGETFRAMEBUFFERPARAMETERIVPROC __glewGetFramebufferParameteriv;
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1438:122: error: 'void __glewGetProgramInterfaceiv(GLuint, GLenum, GLenum, GLint*)' redeclared as different kind of entity
 1438 | GL_APICALL void GL_APIENTRY glGetProgramInterfaceiv (GLuint program, GLenum programInterface, GLenum pname, GLint *params);
      |                                                                                                                          ^
/usr/include/GL/glew.h:23110:48: note: previous declaration 'void (* __glewGetProgramInterfaceiv)(GLuint, GLenum, GLenum, GLint*)'
23110 | GLEW_FUN_EXPORT PFNGLGETPROGRAMINTERFACEIVPROC __glewGetProgramInterfaceiv;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1439:117: error: 'GLuint __glewGetProgramResourceIndex(GLuint, GLenum, const GLchar*)' redeclared as different kind of entity
 1439 | GL_APICALL GLuint GL_APIENTRY glGetProgramResourceIndex (GLuint program, GLenum programInterface, const GLchar *name);
      |                                                                                                                     ^
/usr/include/GL/glew.h:23111:50: note: previous declaration 'GLuint (* __glewGetProgramResourceIndex)(GLuint, GLenum, const GLchar*)'
23111 | GLEW_FUN_EXPORT PFNGLGETPROGRAMRESOURCEINDEXPROC __glewGetProgramResourceIndex;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1440:156: error: 'void __glewGetProgramResourceName(GLuint, GLenum, GLuint, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of entity
 1440 | GL_APICALL void GL_APIENTRY glGetProgramResourceName (GLuint program, GLenum programInterface, GLuint index, GLsizei bufSize, GLsizei *length, GLchar *name);
      |                                                                                                                                                            ^
/usr/include/GL/glew.h:23114:49: note: previous declaration 'void (* __glewGetProgramResourceName)(GLuint, GLenum, GLuint, GLsizei, GLsizei*, GLchar*)'
23114 | GLEW_FUN_EXPORT PFNGLGETPROGRAMRESOURCENAMEPROC __glewGetProgramResourceName;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1441:195: error: 'void __glewGetProgramResourceiv(GLuint, GLenum, GLuint, GLsizei, const GLenum*, GLsizei, GLsizei*, GLint*)' redeclared as different kind of entity
 1441 | GL_APICALL void GL_APIENTRY glGetProgramResourceiv (GLuint program, GLenum programInterface, GLuint index, GLsizei propCount, const GLenum *props, GLsizei bufSize, GLsizei *length, GLint *params);
      |                                                                                                                                                                                                   ^
/usr/include/GL/glew.h:23115:47: note: previous declaration 'void (* __glewGetProgramResourceiv)(GLuint, GLenum, GLuint, GLsizei, const GLenum*, GLsizei, GLsizei*, GLint*)'
23115 | GLEW_FUN_EXPORT PFNGLGETPROGRAMRESOURCEIVPROC __glewGetProgramResourceiv;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1442:119: error: 'GLint __glewGetProgramResourceLocation(GLuint, GLenum, const GLchar*)' redeclared as different kind of entity
 1442 | GL_APICALL GLint GL_APIENTRY glGetProgramResourceLocation (GLuint program, GLenum programInterface, const GLchar *name);
      |                                                                                                                       ^
/usr/include/GL/glew.h:23112:53: note: previous declaration 'GLint (* __glewGetProgramResourceLocation)(GLuint, GLenum, const GLchar*)'
23112 | GLEW_FUN_EXPORT PFNGLGETPROGRAMRESOURCELOCATIONPROC __glewGetProgramResourceLocation;
      |                                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1443:99: error: 'void __glewUseProgramStages(GLuint, GLbitfield, GLuint)' redeclared as different kind of entity
 1443 | GL_APICALL void GL_APIENTRY glUseProgramStages (GLuint pipeline, GLbitfield stages, GLuint program);
      |                                                                                                   ^
/usr/include/GL/glew.h:23218:43: note: previous declaration 'void (* __glewUseProgramStages)(GLuint, GLbitfield, GLuint)'
23218 | GLEW_FUN_EXPORT PFNGLUSEPROGRAMSTAGESPROC __glewUseProgramStages;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1444:83: error: 'void __glewActiveShaderProgram(GLuint, GLuint)' redeclared as different kind of entity
 1444 | GL_APICALL void GL_APIENTRY glActiveShaderProgram (GLuint pipeline, GLuint program);
      |                                                                                   ^
/usr/include/GL/glew.h:23160:46: note: previous declaration 'void (* __glewActiveShaderProgram)(GLuint, GLuint)'
23160 | GLEW_FUN_EXPORT PFNGLACTIVESHADERPROGRAMPROC __glewActiveShaderProgram;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1445:110: error: 'GLuint __glewCreateShaderProgramv(GLenum, GLsizei, const GLchar* const*)' redeclared as different kind of entity
 1445 | GL_APICALL GLuint GL_APIENTRY glCreateShaderProgramv (GLenum type, GLsizei count, const GLchar *const*strings);
      |                                                                                                              ^
/usr/include/GL/glew.h:23162:47: note: previous declaration 'GLuint (* __glewCreateShaderProgramv)(GLenum, GLsizei, const GLchar* const*)'
23162 | GLEW_FUN_EXPORT PFNGLCREATESHADERPROGRAMVPROC __glewCreateShaderProgramv;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1446:67: error: 'void __glewBindProgramPipeline(GLuint)' redeclared as different kind of entity
 1446 | GL_APICALL void GL_APIENTRY glBindProgramPipeline (GLuint pipeline);
      |                                                                   ^
/usr/include/GL/glew.h:23161:46: note: previous declaration 'void (* __glewBindProgramPipeline)(GLuint)'
23161 | GLEW_FUN_EXPORT PFNGLBINDPROGRAMPIPELINEPROC __glewBindProgramPipeline;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1447:89: error: 'void __glewDeleteProgramPipelines(GLsizei, const GLuint*)' redeclared as different kind of entity
 1447 | GL_APICALL void GL_APIENTRY glDeleteProgramPipelines (GLsizei n, const GLuint *pipelines);
      |                                                                                         ^
/usr/include/GL/glew.h:23163:49: note: previous declaration 'void (* __glewDeleteProgramPipelines)(GLsizei, const GLuint*)'
23163 | GLEW_FUN_EXPORT PFNGLDELETEPROGRAMPIPELINESPROC __glewDeleteProgramPipelines;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1448:80: error: 'void __glewGenProgramPipelines(GLsizei, GLuint*)' redeclared as different kind of entity
 1448 | GL_APICALL void GL_APIENTRY glGenProgramPipelines (GLsizei n, GLuint *pipelines);
      |                                                                                ^
/usr/include/GL/glew.h:23164:46: note: previous declaration 'void (* __glewGenProgramPipelines)(GLsizei, GLuint*)'
23164 | GLEW_FUN_EXPORT PFNGLGENPROGRAMPIPELINESPROC __glewGenProgramPipelines;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1449:70: error: 'GLboolean __glewIsProgramPipeline(GLuint)' redeclared as different kind of entity
 1449 | GL_APICALL GLboolean GL_APIENTRY glIsProgramPipeline (GLuint pipeline);
      |                                                                      ^
/usr/include/GL/glew.h:23167:44: note: previous declaration 'GLboolean (* __glewIsProgramPipeline)(GLuint)'
23167 | GLEW_FUN_EXPORT PFNGLISPROGRAMPIPELINEPROC __glewIsProgramPipeline;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1450:97: error: 'void __glewGetProgramPipelineiv(GLuint, GLenum, GLint*)' redeclared as different kind of entity
 1450 | GL_APICALL void GL_APIENTRY glGetProgramPipelineiv (GLuint pipeline, GLenum pname, GLint *params);
      |                                                                                                 ^
/usr/include/GL/glew.h:23166:47: note: previous declaration 'void (* __glewGetProgramPipelineiv)(GLuint, GLenum, GLint*)'
23166 | GLEW_FUN_EXPORT PFNGLGETPROGRAMPIPELINEIVPROC __glewGetProgramPipelineiv;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1451:89: error: 'void __glewProgramUniform1i(GLuint, GLint, GLint)' redeclared as different kind of entity
 1451 | GL_APICALL void GL_APIENTRY glProgramUniform1i (GLuint program, GLint location, GLint v0);
      |                                                                                         ^
/usr/include/GL/glew.h:23172:43: note: previous declaration 'void (* __glewProgramUniform1i)(GLuint, GLint, GLint)'
23172 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1IPROC __glewProgramUniform1i;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1452:99: error: 'void __glewProgramUniform2i(GLuint, GLint, GLint, GLint)' redeclared as different kind of entity
 1452 | GL_APICALL void GL_APIENTRY glProgramUniform2i (GLuint program, GLint location, GLint v0, GLint v1);
      |                                                                                                   ^
/usr/include/GL/glew.h:23180:43: note: previous declaration 'void (* __glewProgramUniform2i)(GLuint, GLint, GLint, GLint)'
23180 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2IPROC __glewProgramUniform2i;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1453:109: error: 'void __glewProgramUniform3i(GLuint, GLint, GLint, GLint, GLint)' redeclared as different kind of entity
 1453 | GL_APICALL void GL_APIENTRY glProgramUniform3i (GLuint program, GLint location, GLint v0, GLint v1, GLint v2);
      |                                                                                                             ^
/usr/include/GL/glew.h:23188:43: note: previous declaration 'void (* __glewProgramUniform3i)(GLuint, GLint, GLint, GLint, GLint)'
23188 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3IPROC __glewProgramUniform3i;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1454:119: error: 'void __glewProgramUniform4i(GLuint, GLint, GLint, GLint, GLint, GLint)' redeclared as different kind of entity
 1454 | GL_APICALL void GL_APIENTRY glProgramUniform4i (GLuint program, GLint location, GLint v0, GLint v1, GLint v2, GLint v3);
      |                                                                                                                       ^
/usr/include/GL/glew.h:23196:43: note: previous declaration 'void (* __glewProgramUniform4i)(GLuint, GLint, GLint, GLint, GLint, GLint)'
23196 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4IPROC __glewProgramUniform4i;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1455:91: error: 'void __glewProgramUniform1ui(GLuint, GLint, GLuint)' redeclared as different kind of entity
 1455 | GL_APICALL void GL_APIENTRY glProgramUniform1ui (GLuint program, GLint location, GLuint v0);
      |                                                                                           ^
/usr/include/GL/glew.h:23174:44: note: previous declaration 'void (* __glewProgramUniform1ui)(GLuint, GLint, GLuint)'
23174 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1UIPROC __glewProgramUniform1ui;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1456:102: error: 'void __glewProgramUniform2ui(GLuint, GLint, GLuint, GLuint)' redeclared as different kind of entity
 1456 | GL_APICALL void GL_APIENTRY glProgramUniform2ui (GLuint program, GLint location, GLuint v0, GLuint v1);
      |                                                                                                      ^
/usr/include/GL/glew.h:23182:44: note: previous declaration 'void (* __glewProgramUniform2ui)(GLuint, GLint, GLuint, GLuint)'
23182 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2UIPROC __glewProgramUniform2ui;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1457:113: error: 'void __glewProgramUniform3ui(GLuint, GLint, GLuint, GLuint, GLuint)' redeclared as different kind of entity
 1457 | GL_APICALL void GL_APIENTRY glProgramUniform3ui (GLuint program, GLint location, GLuint v0, GLuint v1, GLuint v2);
      |                                                                                                                 ^
/usr/include/GL/glew.h:23190:44: note: previous declaration 'void (* __glewProgramUniform3ui)(GLuint, GLint, GLuint, GLuint, GLuint)'
23190 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3UIPROC __glewProgramUniform3ui;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1458:124: error: 'void __glewProgramUniform4ui(GLuint, GLint, GLuint, GLuint, GLuint, GLuint)' redeclared as different kind of entity
 1458 | GL_APICALL void GL_APIENTRY glProgramUniform4ui (GLuint program, GLint location, GLuint v0, GLuint v1, GLuint v2, GLuint v3);
      |                                                                                                                            ^
/usr/include/GL/glew.h:23198:44: note: previous declaration 'void (* __glewProgramUniform4ui)(GLuint, GLint, GLuint, GLuint, GLuint, GLuint)'
23198 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4UIPROC __glewProgramUniform4ui;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1459:91: error: 'void __glewProgramUniform1f(GLuint, GLint, GLfloat)' redeclared as different kind of entity
 1459 | GL_APICALL void GL_APIENTRY glProgramUniform1f (GLuint program, GLint location, GLfloat v0);
      |                                                                                           ^
/usr/include/GL/glew.h:23170:43: note: previous declaration 'void (* __glewProgramUniform1f)(GLuint, GLint, GLfloat)'
23170 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1FPROC __glewProgramUniform1f;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1460:103: error: 'void __glewProgramUniform2f(GLuint, GLint, GLfloat, GLfloat)' redeclared as different kind of entity
 1460 | GL_APICALL void GL_APIENTRY glProgramUniform2f (GLuint program, GLint location, GLfloat v0, GLfloat v1);
      |                                                                                                       ^
/usr/include/GL/glew.h:23178:43: note: previous declaration 'void (* __glewProgramUniform2f)(GLuint, GLint, GLfloat, GLfloat)'
23178 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2FPROC __glewProgramUniform2f;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1461:115: error: 'void __glewProgramUniform3f(GLuint, GLint, GLfloat, GLfloat, GLfloat)' redeclared as different kind of entity
 1461 | GL_APICALL void GL_APIENTRY glProgramUniform3f (GLuint program, GLint location, GLfloat v0, GLfloat v1, GLfloat v2);
      |                                                                                                                   ^
/usr/include/GL/glew.h:23186:43: note: previous declaration 'void (* __glewProgramUniform3f)(GLuint, GLint, GLfloat, GLfloat, GLfloat)'
23186 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3FPROC __glewProgramUniform3f;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1462:127: error: 'void __glewProgramUniform4f(GLuint, GLint, GLfloat, GLfloat, GLfloat, GLfloat)' redeclared as different kind of entity
 1462 | GL_APICALL void GL_APIENTRY glProgramUniform4f (GLuint program, GLint location, GLfloat v0, GLfloat v1, GLfloat v2, GLfloat v3);
      |                                                                                                                               ^
/usr/include/GL/glew.h:23194:43: note: previous declaration 'void (* __glewProgramUniform4f)(GLuint, GLint, GLfloat, GLfloat, GLfloat, GLfloat)'
23194 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4FPROC __glewProgramUniform4f;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1463:115: error: 'void __glewProgramUniform1iv(GLuint, GLint, GLsizei, const GLint*)' redeclared as different kind of entity
 1463 | GL_APICALL void GL_APIENTRY glProgramUniform1iv (GLuint program, GLint location, GLsizei count, const GLint *value);
      |                                                                                                                   ^
/usr/include/GL/glew.h:23173:44: note: previous declaration 'void (* __glewProgramUniform1iv)(GLuint, GLint, GLsizei, const GLint*)'
23173 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1IVPROC __glewProgramUniform1iv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1464:115: error: 'void __glewProgramUniform2iv(GLuint, GLint, GLsizei, const GLint*)' redeclared as different kind of entity
 1464 | GL_APICALL void GL_APIENTRY glProgramUniform2iv (GLuint program, GLint location, GLsizei count, const GLint *value);
      |                                                                                                                   ^
/usr/include/GL/glew.h:23181:44: note: previous declaration 'void (* __glewProgramUniform2iv)(GLuint, GLint, GLsizei, const GLint*)'
23181 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2IVPROC __glewProgramUniform2iv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1465:115: error: 'void __glewProgramUniform3iv(GLuint, GLint, GLsizei, const GLint*)' redeclared as different kind of entity
 1465 | GL_APICALL void GL_APIENTRY glProgramUniform3iv (GLuint program, GLint location, GLsizei count, const GLint *value);
      |                                                                                                                   ^
/usr/include/GL/glew.h:23189:44: note: previous declaration 'void (* __glewProgramUniform3iv)(GLuint, GLint, GLsizei, const GLint*)'
23189 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3IVPROC __glewProgramUniform3iv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1466:115: error: 'void __glewProgramUniform4iv(GLuint, GLint, GLsizei, const GLint*)' redeclared as different kind of entity
 1466 | GL_APICALL void GL_APIENTRY glProgramUniform4iv (GLuint program, GLint location, GLsizei count, const GLint *value);
      |                                                                                                                   ^
/usr/include/GL/glew.h:23197:44: note: previous declaration 'void (* __glewProgramUniform4iv)(GLuint, GLint, GLsizei, const GLint*)'
23197 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4IVPROC __glewProgramUniform4iv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1467:117: error: 'void __glewProgramUniform1uiv(GLuint, GLint, GLsizei, const GLuint*)' redeclared as different kind of entity
 1467 | GL_APICALL void GL_APIENTRY glProgramUniform1uiv (GLuint program, GLint location, GLsizei count, const GLuint *value);
      |                                                                                                                     ^
/usr/include/GL/glew.h:23175:45: note: previous declaration 'void (* __glewProgramUniform1uiv)(GLuint, GLint, GLsizei, const GLuint*)'
23175 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1UIVPROC __glewProgramUniform1uiv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1468:117: error: 'void __glewProgramUniform2uiv(GLuint, GLint, GLsizei, const GLuint*)' redeclared as different kind of entity
 1468 | GL_APICALL void GL_APIENTRY glProgramUniform2uiv (GLuint program, GLint location, GLsizei count, const GLuint *value);
      |                                                                                                                     ^
/usr/include/GL/glew.h:23183:45: note: previous declaration 'void (* __glewProgramUniform2uiv)(GLuint, GLint, GLsizei, const GLuint*)'
23183 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2UIVPROC __glewProgramUniform2uiv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1469:117: error: 'void __glewProgramUniform3uiv(GLuint, GLint, GLsizei, const GLuint*)' redeclared as different kind of entity
 1469 | GL_APICALL void GL_APIENTRY glProgramUniform3uiv (GLuint program, GLint location, GLsizei count, const GLuint *value);
      |                                                                                                                     ^
/usr/include/GL/glew.h:23191:45: note: previous declaration 'void (* __glewProgramUniform3uiv)(GLuint, GLint, GLsizei, const GLuint*)'
23191 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3UIVPROC __glewProgramUniform3uiv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1470:117: error: 'void __glewProgramUniform4uiv(GLuint, GLint, GLsizei, const GLuint*)' redeclared as different kind of entity
 1470 | GL_APICALL void GL_APIENTRY glProgramUniform4uiv (GLuint program, GLint location, GLsizei count, const GLuint *value);
      |                                                                                                                     ^
/usr/include/GL/glew.h:23199:45: note: previous declaration 'void (* __glewProgramUniform4uiv)(GLuint, GLint, GLsizei, const GLuint*)'
23199 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4UIVPROC __glewProgramUniform4uiv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1471:117: error: 'void __glewProgramUniform1fv(GLuint, GLint, GLsizei, const GLfloat*)' redeclared as different kind of entity
 1471 | GL_APICALL void GL_APIENTRY glProgramUniform1fv (GLuint program, GLint location, GLsizei count, const GLfloat *value);
      |                                                                                                                     ^
/usr/include/GL/glew.h:23171:44: note: previous declaration 'void (* __glewProgramUniform1fv)(GLuint, GLint, GLsizei, const GLfloat*)'
23171 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1FVPROC __glewProgramUniform1fv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1472:117: error: 'void __glewProgramUniform2fv(GLuint, GLint, GLsizei, const GLfloat*)' redeclared as different kind of entity
 1472 | GL_APICALL void GL_APIENTRY glProgramUniform2fv (GLuint program, GLint location, GLsizei count, const GLfloat *value);
      |                                                                                                                     ^
/usr/include/GL/glew.h:23179:44: note: previous declaration 'void (* __glewProgramUniform2fv)(GLuint, GLint, GLsizei, const GLfloat*)'
23179 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2FVPROC __glewProgramUniform2fv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1473:117: error: 'void __glewProgramUniform3fv(GLuint, GLint, GLsizei, const GLfloat*)' redeclared as different kind of entity
 1473 | GL_APICALL void GL_APIENTRY glProgramUniform3fv (GLuint program, GLint location, GLsizei count, const GLfloat *value);
      |                                                                                                                     ^
/usr/include/GL/glew.h:23187:44: note: previous declaration 'void (* __glewProgramUniform3fv)(GLuint, GLint, GLsizei, const GLfloat*)'
23187 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3FVPROC __glewProgramUniform3fv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1474:117: error: 'void __glewProgramUniform4fv(GLuint, GLint, GLsizei, const GLfloat*)' redeclared as different kind of entity
 1474 | GL_APICALL void GL_APIENTRY glProgramUniform4fv (GLuint program, GLint location, GLsizei count, const GLfloat *value);
      |                                                                                                                     ^
/usr/include/GL/glew.h:23195:44: note: previous declaration 'void (* __glewProgramUniform4fv)(GLuint, GLint, GLsizei, const GLfloat*)'
23195 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4FVPROC __glewProgramUniform4fv;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1475:144: error: 'void __glewProgramUniformMatrix2fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1475 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix2fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                                                ^
/usr/include/GL/glew.h:23201:50: note: previous declaration 'void (* __glewProgramUniformMatrix2fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)'
23201 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX2FVPROC __glewProgramUniformMatrix2fv;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1476:144: error: 'void __glewProgramUniformMatrix3fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1476 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix3fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                                                ^
/usr/include/GL/glew.h:23207:50: note: previous declaration 'void (* __glewProgramUniformMatrix3fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)'
23207 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX3FVPROC __glewProgramUniformMatrix3fv;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1477:144: error: 'void __glewProgramUniformMatrix4fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1477 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix4fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                                                ^
/usr/include/GL/glew.h:23213:50: note: previous declaration 'void (* __glewProgramUniformMatrix4fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)'
23213 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX4FVPROC __glewProgramUniformMatrix4fv;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1478:146: error: 'void __glewProgramUniformMatrix2x3fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1478 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix2x3fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                                                  ^
/usr/include/GL/glew.h:23203:52: note: previous declaration 'void (* __glewProgramUniformMatrix2x3fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)'
23203 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX2X3FVPROC __glewProgramUniformMatrix2x3fv;
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1479:146: error: 'void __glewProgramUniformMatrix3x2fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1479 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix3x2fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                                                  ^
/usr/include/GL/glew.h:23209:52: note: previous declaration 'void (* __glewProgramUniformMatrix3x2fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)'
23209 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX3X2FVPROC __glewProgramUniformMatrix3x2fv;
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1480:146: error: 'void __glewProgramUniformMatrix2x4fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1480 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix2x4fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                                                  ^
/usr/include/GL/glew.h:23205:52: note: previous declaration 'void (* __glewProgramUniformMatrix2x4fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)'
23205 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX2X4FVPROC __glewProgramUniformMatrix2x4fv;
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1481:146: error: 'void __glewProgramUniformMatrix4x2fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1481 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix4x2fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                                                  ^
/usr/include/GL/glew.h:23215:52: note: previous declaration 'void (* __glewProgramUniformMatrix4x2fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)'
23215 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX4X2FVPROC __glewProgramUniformMatrix4x2fv;
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1482:146: error: 'void __glewProgramUniformMatrix3x4fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1482 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix3x4fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                                                  ^
/usr/include/GL/glew.h:23211:52: note: previous declaration 'void (* __glewProgramUniformMatrix3x4fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)'
23211 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX3X4FVPROC __glewProgramUniformMatrix3x4fv;
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1483:146: error: 'void __glewProgramUniformMatrix4x3fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)' redeclared as different kind of entity
 1483 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix4x3fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value);
      |                                                                                                                                                  ^
/usr/include/GL/glew.h:23217:52: note: previous declaration 'void (* __glewProgramUniformMatrix4x3fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)'
23217 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX4X3FVPROC __glewProgramUniformMatrix4x3fv;
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1484:71: error: 'void __glewValidateProgramPipeline(GLuint)' redeclared as different kind of entity
 1484 | GL_APICALL void GL_APIENTRY glValidateProgramPipeline (GLuint pipeline);
      |                                                                       ^
/usr/include/GL/glew.h:23219:50: note: previous declaration 'void (* __glewValidateProgramPipeline)(GLuint)'
23219 | GLEW_FUN_EXPORT PFNGLVALIDATEPROGRAMPIPELINEPROC __glewValidateProgramPipeline;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1485:124: error: 'void __glewGetProgramPipelineInfoLog(GLuint, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of entity
 1485 | GL_APICALL void GL_APIENTRY glGetProgramPipelineInfoLog (GLuint pipeline, GLsizei bufSize, GLsizei *length, GLchar *infoLog);
      |                                                                                                                            ^
/usr/include/GL/glew.h:23165:52: note: previous declaration 'void (* __glewGetProgramPipelineInfoLog)(GLuint, GLsizei, GLsizei*, GLchar*)'
23165 | GLEW_FUN_EXPORT PFNGLGETPROGRAMPIPELINEINFOLOGPROC __glewGetProgramPipelineInfoLog;
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1486:151: error: 'void __glewBindImageTexture(GLuint, GLuint, GLint, GLboolean, GLint, GLenum, GLenum)' redeclared as different kind of entity
 1486 | GL_APICALL void GL_APIENTRY glBindImageTexture (GLuint unit, GLuint texture, GLint level, GLboolean layered, GLint layer, GLenum access, GLenum format);
      |                                                                                                                                                       ^
/usr/include/GL/glew.h:23223:43: note: previous declaration 'void (* __glewBindImageTexture)(GLuint, GLuint, GLint, GLboolean, GLint, GLenum, GLenum)'
23223 | GLEW_FUN_EXPORT PFNGLBINDIMAGETEXTUREPROC __glewBindImageTexture;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1487:90: error: 'void __glewGetBooleani_v(GLenum, GLuint, GLboolean*)' redeclared as different kind of entity
 1487 | GL_APICALL void GL_APIENTRY glGetBooleani_v (GLenum target, GLuint index, GLboolean *data);
      |                                                                                          ^
/usr/include/GL/glew.h:22515:40: note: previous declaration 'void (* __glewGetBooleani_v)(GLenum, GLuint, GLboolean*)'
22515 | GLEW_FUN_EXPORT PFNGLGETBOOLEANI_VPROC __glewGetBooleani_v;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1488:65: error: 'void __glewMemoryBarrier(GLbitfield)' redeclared as different kind of entity
 1488 | GL_APICALL void GL_APIENTRY glMemoryBarrier (GLbitfield barriers);
      |                                                                 ^
/usr/include/GL/glew.h:23224:40: note: previous declaration 'void (* __glewMemoryBarrier)(GLbitfield)'
23224 | GLEW_FUN_EXPORT PFNGLMEMORYBARRIERPROC __glewMemoryBarrier;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1489:73: error: 'void __glewMemoryBarrierByRegion(GLbitfield)' redeclared as different kind of entity
 1489 | GL_APICALL void GL_APIENTRY glMemoryBarrierByRegion (GLbitfield barriers);
      |                                                                         ^
/usr/include/GL/glew.h:22720:48: note: previous declaration 'void (* __glewMemoryBarrierByRegion)(GLbitfield)'
22720 | GLEW_FUN_EXPORT PFNGLMEMORYBARRIERBYREGIONPROC __glewMemoryBarrierByRegion;
      |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1490:172: error: 'void __glewTexStorage2DMultisample(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLboolean)' redeclared as different kind of entity
 1490 | GL_APICALL void GL_APIENTRY glTexStorage2DMultisample (GLenum target, GLsizei samples, GLenum internalformat, GLsizei width, GLsizei height, GLboolean fixedsamplelocations);
      |                                                                                                                                                                            ^
/usr/include/GL/glew.h:23323:50: note: previous declaration 'void (* __glewTexStorage2DMultisample)(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLboolean)'
23323 | GLEW_FUN_EXPORT PFNGLTEXSTORAGE2DMULTISAMPLEPROC __glewTexStorage2DMultisample;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1491:89: error: 'void __glewGetMultisamplefv(GLenum, GLuint, GLfloat*)' redeclared as different kind of entity
 1491 | GL_APICALL void GL_APIENTRY glGetMultisamplefv (GLenum pname, GLuint index, GLfloat *val);
      |                                                                                         ^
/usr/include/GL/glew.h:23314:43: note: previous declaration 'void (* __glewGetMultisamplefv)(GLenum, GLuint, GLfloat*)'
23314 | GLEW_FUN_EXPORT PFNGLGETMULTISAMPLEFVPROC __glewGetMultisamplefv;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1492:78: error: 'void __glewSampleMaski(GLuint, GLbitfield)' redeclared as different kind of entity
 1492 | GL_APICALL void GL_APIENTRY glSampleMaski (GLuint maskNumber, GLbitfield mask);
      |                                                                              ^
/usr/include/GL/glew.h:23315:38: note: previous declaration 'void (* __glewSampleMaski)(GLuint, GLbitfield)'
23315 | GLEW_FUN_EXPORT PFNGLSAMPLEMASKIPROC __glewSampleMaski;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1495:116: error: 'void __glewBindVertexBuffer(GLuint, GLuint, GLintptr, GLsizei)' redeclared as different kind of entity
 1495 | GL_APICALL void GL_APIENTRY glBindVertexBuffer (GLuint bindingindex, GLuint buffer, GLintptr offset, GLsizei stride);
      |                                                                                                                    ^
/usr/include/GL/glew.h:23382:43: note: previous declaration 'void (* __glewBindVertexBuffer)(GLuint, GLuint, GLintptr, GLsizei)'
23382 | GLEW_FUN_EXPORT PFNGLBINDVERTEXBUFFERPROC __glewBindVertexBuffer;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1496:139: error: 'void __glewVertexAttribFormat(GLuint, GLint, GLenum, GLboolean, GLuint)' redeclared as different kind of entity
 1496 | GL_APICALL void GL_APIENTRY glVertexAttribFormat (GLuint attribindex, GLint size, GLenum type, GLboolean normalized, GLuint relativeoffset);
      |                                                                                                                                           ^
/usr/include/GL/glew.h:23390:45: note: previous declaration 'void (* __glewVertexAttribFormat)(GLuint, GLint, GLenum, GLboolean, GLuint)'
23390 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBFORMATPROC __glewVertexAttribFormat;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1497:118: error: 'void __glewVertexAttribIFormat(GLuint, GLint, GLenum, GLuint)' redeclared as different kind of entity
 1497 | GL_APICALL void GL_APIENTRY glVertexAttribIFormat (GLuint attribindex, GLint size, GLenum type, GLuint relativeoffset);
      |                                                                                                                      ^
/usr/include/GL/glew.h:23391:46: note: previous declaration 'void (* __glewVertexAttribIFormat)(GLuint, GLint, GLenum, GLuint)'
23391 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBIFORMATPROC __glewVertexAttribIFormat;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1498:91: error: 'void __glewVertexAttribBinding(GLuint, GLuint)' redeclared as different kind of entity
 1498 | GL_APICALL void GL_APIENTRY glVertexAttribBinding (GLuint attribindex, GLuint bindingindex);
      |                                                                                           ^
/usr/include/GL/glew.h:23389:46: note: previous declaration 'void (* __glewVertexAttribBinding)(GLuint, GLuint)'
23389 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBBINDINGPROC __glewVertexAttribBinding;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1499:88: error: 'void __glewVertexBindingDivisor(GLuint, GLuint)' redeclared as different kind of entity
 1499 | GL_APICALL void GL_APIENTRY glVertexBindingDivisor (GLuint bindingindex, GLuint divisor);
      |                                                                                        ^
/usr/include/GL/glew.h:23393:47: note: previous declaration 'void (* __glewVertexBindingDivisor)(GLuint, GLuint)'
23393 | GLEW_FUN_EXPORT PFNGLVERTEXBINDINGDIVISORPROC __glewVertexBindingDivisor;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1722:28: error: conflicting declaration 'typedef void (* PFNGLOBJECTPTRLABELPROC)(const void*, GLsizei, const GLchar*)'
 1722 | typedef void (GL_APIENTRYP PFNGLOBJECTPTRLABELPROC) (const void *ptr, GLsizei length, const GLchar *label);
      |                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GL/glew.h:14422:28: note: previous declaration as 'typedef void (* PFNGLOBJECTPTRLABELPROC)(void*, GLsizei, const GLchar*)'
14422 | typedef void (GLAPIENTRY * PFNGLOBJECTPTRLABELPROC) (void* ptr, GLsizei length, const GLchar* label);
      |                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1723:28: error: conflicting declaration 'typedef void (* PFNGLGETOBJECTPTRLABELPROC)(const void*, GLsizei, GLsizei*, GLchar*)'
 1723 | typedef void (GL_APIENTRYP PFNGLGETOBJECTPTRLABELPROC) (const void *ptr, GLsizei bufSize, GLsizei *length, GLchar *label);
      |                            ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GL/glew.h:14420:28: note: previous declaration as 'typedef void (* PFNGLGETOBJECTPTRLABELPROC)(void*, GLsizei, GLsizei*, GLchar*)'
14420 | typedef void (GLAPIENTRY * PFNGLGETOBJECTPTRLABELPROC) (void* ptr, GLsizei bufSize, GLsizei* length, GLchar *label);
      |                            ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1758:274: error: 'void __glewCopyImageSubData(GLuint, GLenum, GLint, GLint, GLint, GLint, GLuint, GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei)' redeclared as different kind of entity
 1758 | GL_APICALL void GL_APIENTRY glCopyImageSubData (GLuint srcName, GLenum srcTarget, GLint srcLevel, GLint srcX, GLint srcY, GLint srcZ, GLuint dstName, GLenum dstTarget, GLint dstLevel, GLint dstX, GLint dstY, GLint dstZ, GLsizei srcWidth, GLsizei srcHeight, GLsizei srcDepth);
      |                                                                                                                                                                                                                                                                                  ^
/usr/include/GL/glew.h:22771:43: note: previous declaration 'void (* __glewCopyImageSubData)(GLuint, GLenum, GLint, GLint, GLint, GLint, GLuint, GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei)'
22771 | GLEW_FUN_EXPORT PFNGLCOPYIMAGESUBDATAPROC __glewCopyImageSubData;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1759:148: error: 'void __glewDebugMessageControl(GLenum, GLenum, GLenum, GLsizei, const GLuint*, GLboolean)' redeclared as different kind of entity
 1759 | GL_APICALL void GL_APIENTRY glDebugMessageControl (GLenum source, GLenum type, GLenum severity, GLsizei count, const GLuint *ids, GLboolean enabled);
      |                                                                                                                                                    ^
/usr/include/GL/glew.h:24417:46: note: previous declaration 'void (* __glewDebugMessageControl)(GLenum, GLenum, GLenum, GLsizei, const GLuint*, GLboolean)'
24417 | GLEW_FUN_EXPORT PFNGLDEBUGMESSAGECONTROLPROC __glewDebugMessageControl;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1760:140: error: 'void __glewDebugMessageInsert(GLenum, GLenum, GLuint, GLenum, GLsizei, const GLchar*)' redeclared as different kind of entity
 1760 | GL_APICALL void GL_APIENTRY glDebugMessageInsert (GLenum source, GLenum type, GLuint id, GLenum severity, GLsizei length, const GLchar *buf);
      |                                                                                                                                            ^
/usr/include/GL/glew.h:24418:45: note: previous declaration 'void (* __glewDebugMessageInsert)(GLenum, GLenum, GLuint, GLenum, GLsizei, const GLchar*)'
24418 | GLEW_FUN_EXPORT PFNGLDEBUGMESSAGEINSERTPROC __glewDebugMessageInsert;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1761:96: error: 'void __glewDebugMessageCallback(GLDEBUGPROC, const void*)' redeclared as different kind of entity
 1761 | GL_APICALL void GL_APIENTRY glDebugMessageCallback (GLDEBUGPROC callback, const void *userParam);
      |                                                                                                ^
/usr/include/GL/glew.h:24416:47: note: previous declaration 'void (* __glewDebugMessageCallback)(GLDEBUGPROC, const void*)'
24416 | GLEW_FUN_EXPORT PFNGLDEBUGMESSAGECALLBACKPROC __glewDebugMessageCallback;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1762:185: error: 'GLuint __glewGetDebugMessageLog(GLuint, GLsizei, GLenum*, GLenum*, GLuint*, GLenum*, GLsizei*, GLchar*)' redeclared as different kind of entity
 1762 | GL_APICALL GLuint GL_APIENTRY glGetDebugMessageLog (GLuint count, GLsizei bufSize, GLenum *sources, GLenum *types, GLuint *ids, GLenum *severities, GLsizei *lengths, GLchar *messageLog);
      |                                                                                                                                                                                         ^
/usr/include/GL/glew.h:24419:45: note: previous declaration 'GLuint (* __glewGetDebugMessageLog)(GLuint, GLsizei, GLenum*, GLenum*, GLuint*, GLenum*, GLsizei*, GLchar*)'
24419 | GLEW_FUN_EXPORT PFNGLGETDEBUGMESSAGELOGPROC __glewGetDebugMessageLog;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1763:110: error: 'void __glewPushDebugGroup(GLenum, GLuint, GLsizei, const GLchar*)' redeclared as different kind of entity
 1763 | GL_APICALL void GL_APIENTRY glPushDebugGroup (GLenum source, GLuint id, GLsizei length, const GLchar *message);
      |                                                                                                              ^
/usr/include/GL/glew.h:24425:41: note: previous declaration 'void (* __glewPushDebugGroup)(GLenum, GLuint, GLsizei, const GLchar*)'
24425 | GLEW_FUN_EXPORT PFNGLPUSHDEBUGGROUPPROC __glewPushDebugGroup;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1764:50: error: 'void __glewPopDebugGroup()' redeclared as different kind of entity
 1764 | GL_APICALL void GL_APIENTRY glPopDebugGroup (void);
      |                                                  ^
/usr/include/GL/glew.h:24424:40: note: previous declaration 'void (* __glewPopDebugGroup)()'
24424 | GLEW_FUN_EXPORT PFNGLPOPDEBUGGROUPPROC __glewPopDebugGroup;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1765:111: error: 'void __glewObjectLabel(GLenum, GLuint, GLsizei, const GLchar*)' redeclared as different kind of entity
 1765 | GL_APICALL void GL_APIENTRY glObjectLabel (GLenum identifier, GLuint name, GLsizei length, const GLchar *label);
      |                                                                                                               ^
/usr/include/GL/glew.h:24422:38: note: previous declaration 'void (* __glewObjectLabel)(GLenum, GLuint, GLsizei, const GLchar*)'
24422 | GLEW_FUN_EXPORT PFNGLOBJECTLABELPROC __glewObjectLabel;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1766:126: error: 'void __glewGetObjectLabel(GLenum, GLuint, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of entity
 1766 | GL_APICALL void GL_APIENTRY glGetObjectLabel (GLenum identifier, GLuint name, GLsizei bufSize, GLsizei *length, GLchar *label);
      |                                                                                                                              ^
/usr/include/GL/glew.h:24420:41: note: previous declaration 'void (* __glewGetObjectLabel)(GLenum, GLuint, GLsizei, GLsizei*, GLchar*)'
24420 | GLEW_FUN_EXPORT PFNGLGETOBJECTLABELPROC __glewGetObjectLabel;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1767:99: error: 'void __glewObjectPtrLabel(const void*, GLsizei, const GLchar*)' redeclared as different kind of entity
 1767 | GL_APICALL void GL_APIENTRY glObjectPtrLabel (const void *ptr, GLsizei length, const GLchar *label);
      |                                                                                                   ^
/usr/include/GL/glew.h:24423:41: note: previous declaration 'void (* __glewObjectPtrLabel)(void*, GLsizei, const GLchar*)'
24423 | GLEW_FUN_EXPORT PFNGLOBJECTPTRLABELPROC __glewObjectPtrLabel;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1768:114: error: 'void __glewGetObjectPtrLabel(const void*, GLsizei, GLsizei*, GLchar*)' redeclared as different kind of entity
 1768 | GL_APICALL void GL_APIENTRY glGetObjectPtrLabel (const void *ptr, GLsizei bufSize, GLsizei *length, GLchar *label);
      |                                                                                                                  ^
/usr/include/GL/glew.h:24421:44: note: previous declaration 'void (* __glewGetObjectPtrLabel)(void*, GLsizei, GLsizei*, GLchar*)'
24421 | GLEW_FUN_EXPORT PFNGLGETOBJECTPTRLABELPROC __glewGetObjectPtrLabel;
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1770:67: error: 'void __glewEnablei(GLenum, GLuint)' redeclared as different kind of entity
 1770 | GL_APICALL void GL_APIENTRY glEnablei (GLenum target, GLuint index);
      |                                                                   ^
/usr/include/GL/glew.h:22512:34: note: previous declaration 'void (* __glewEnablei)(GLenum, GLuint)'
22512 | GLEW_FUN_EXPORT PFNGLENABLEIPROC __glewEnablei;
      |                                  ^~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1771:68: error: 'void __glewDisablei(GLenum, GLuint)' redeclared as different kind of entity
 1771 | GL_APICALL void GL_APIENTRY glDisablei (GLenum target, GLuint index);
      |                                                                    ^
/usr/include/GL/glew.h:22511:35: note: previous declaration 'void (* __glewDisablei)(GLenum, GLuint)'
22511 | GLEW_FUN_EXPORT PFNGLDISABLEIPROC __glewDisablei;
      |                                   ^~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1772:70: error: 'void __glewBlendEquationi(GLuint, GLenum)' redeclared as different kind of entity
 1772 | GL_APICALL void GL_APIENTRY glBlendEquationi (GLuint buf, GLenum mode);
      |                                                                      ^
/usr/include/GL/glew.h:22570:41: note: previous declaration 'void (* __glewBlendEquationi)(GLuint, GLenum)'
22570 | GLEW_FUN_EXPORT PFNGLBLENDEQUATIONIPROC __glewBlendEquationi;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1773:99: error: 'void __glewBlendEquationSeparatei(GLuint, GLenum, GLenum)' redeclared as different kind of entity
 1773 | GL_APICALL void GL_APIENTRY glBlendEquationSeparatei (GLuint buf, GLenum modeRGB, GLenum modeAlpha);
      |                                                                                                   ^
/usr/include/GL/glew.h:22569:49: note: previous declaration 'void (* __glewBlendEquationSeparatei)(GLuint, GLenum, GLenum)'
22569 | GLEW_FUN_EXPORT PFNGLBLENDEQUATIONSEPARATEIPROC __glewBlendEquationSeparatei;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1774:77: error: 'void __glewBlendFunci(GLuint, GLenum, GLenum)' redeclared as different kind of entity
 1774 | GL_APICALL void GL_APIENTRY glBlendFunci (GLuint buf, GLenum src, GLenum dst);
      |                                                                             ^
/usr/include/GL/glew.h:22572:37: note: previous declaration 'void (* __glewBlendFunci)(GLuint, GLenum, GLenum)'
22572 | GLEW_FUN_EXPORT PFNGLBLENDFUNCIPROC __glewBlendFunci;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1775:125: error: 'void __glewBlendFuncSeparatei(GLuint, GLenum, GLenum, GLenum, GLenum)' redeclared as different kind of entity
 1775 | GL_APICALL void GL_APIENTRY glBlendFuncSeparatei (GLuint buf, GLenum srcRGB, GLenum dstRGB, GLenum srcAlpha, GLenum dstAlpha);
      |                                                                                                                             ^
/usr/include/GL/glew.h:22571:45: note: previous declaration 'void (* __glewBlendFuncSeparatei)(GLuint, GLenum, GLenum, GLenum, GLenum)'
22571 | GLEW_FUN_EXPORT PFNGLBLENDFUNCSEPARATEIPROC __glewBlendFuncSeparatei;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1776:107: error: 'void __glewColorMaski(GLuint, GLboolean, GLboolean, GLboolean, GLboolean)' redeclared as different kind of entity
 1776 | GL_APICALL void GL_APIENTRY glColorMaski (GLuint index, GLboolean r, GLboolean g, GLboolean b, GLboolean a);
      |                                                                                                           ^
/usr/include/GL/glew.h:22510:37: note: previous declaration 'void (* __glewColorMaski)(GLuint, GLboolean, GLboolean, GLboolean, GLboolean)'
22510 | GLEW_FUN_EXPORT PFNGLCOLORMASKIPROC __glewColorMaski;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1777:75: error: 'GLboolean __glewIsEnabledi(GLenum, GLuint)' redeclared as different kind of entity
 1777 | GL_APICALL GLboolean GL_APIENTRY glIsEnabledi (GLenum target, GLuint index);
      |                                                                           ^
/usr/include/GL/glew.h:22524:37: note: previous declaration 'GLboolean (* __glewIsEnabledi)(GLenum, GLuint)'
22524 | GLEW_FUN_EXPORT PFNGLISENABLEDIPROC __glewIsEnabledi;
      |                                     ^~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1778:133: error: 'void __glewDrawElementsBaseVertex(GLenum, GLsizei, GLenum, const void*, GLint)' redeclared as different kind of entity
 1778 | GL_APICALL void GL_APIENTRY glDrawElementsBaseVertex (GLenum mode, GLsizei count, GLenum type, const void *indices, GLint basevertex);
      |                                                                                                                                     ^
/usr/include/GL/glew.h:22883:49: note: previous declaration 'void (* __glewDrawElementsBaseVertex)(GLenum, GLsizei, GLenum, const void*, GLint)'
22883 | GLEW_FUN_EXPORT PFNGLDRAWELEMENTSBASEVERTEXPROC __glewDrawElementsBaseVertex;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1779:164: error: 'void __glewDrawRangeElementsBaseVertex(GLenum, GLuint, GLuint, GLsizei, GLenum, const void*, GLint)' redeclared as different kind of entity
 1779 | GL_APICALL void GL_APIENTRY glDrawRangeElementsBaseVertex (GLenum mode, GLuint start, GLuint end, GLsizei count, GLenum type, const void *indices, GLint basevertex);
      |                                                                                                                                                                    ^
/usr/include/GL/glew.h:22885:54: note: previous declaration 'void (* __glewDrawRangeElementsBaseVertex)(GLenum, GLuint, GLuint, GLsizei, GLenum, const void*, GLint)'
22885 | GLEW_FUN_EXPORT PFNGLDRAWRANGEELEMENTSBASEVERTEXPROC __glewDrawRangeElementsBaseVertex;
      |                                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1780:165: error: 'void __glewDrawElementsInstancedBaseVertex(GLenum, GLsizei, GLenum, const void*, GLsizei, GLint)' redeclared as different kind of entity
 1780 | GL_APICALL void GL_APIENTRY glDrawElementsInstancedBaseVertex (GLenum mode, GLsizei count, GLenum type, const void *indices, GLsizei instancecount, GLint basevertex);
      |                                                                                                                                                                     ^
/usr/include/GL/glew.h:22884:58: note: previous declaration 'void (* __glewDrawElementsInstancedBaseVertex)(GLenum, GLsizei, GLenum, const void*, GLsizei, GLint)'
22884 | GLEW_FUN_EXPORT PFNGLDRAWELEMENTSINSTANCEDBASEVERTEXPROC __glewDrawElementsInstancedBaseVertex;
      |                                                          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1781:112: error: 'void __glewFramebufferTexture(GLenum, GLenum, GLuint, GLint)' redeclared as different kind of entity
 1781 | GL_APICALL void GL_APIENTRY glFramebufferTexture (GLenum target, GLenum attachment, GLuint texture, GLint level);
      |                                                                                                                ^
/usr/include/GL/glew.h:22563:45: note: previous declaration 'void (* __glewFramebufferTexture)(GLenum, GLenum, GLuint, GLint)'
22563 | GLEW_FUN_EXPORT PFNGLFRAMEBUFFERTEXTUREPROC __glewFramebufferTexture;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1783:61: error: 'GLenum __glewGetGraphicsResetStatus()' redeclared as different kind of entity
 1783 | GL_APICALL GLenum GL_APIENTRY glGetGraphicsResetStatus (void);
      |                                                             ^
/usr/include/GL/glew.h:22575:49: note: previous declaration 'GLenum (* __glewGetGraphicsResetStatus)()'
22575 | GLEW_FUN_EXPORT PFNGLGETGRAPHICSRESETSTATUSPROC __glewGetGraphicsResetStatus;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1784:148: error: 'void __glewReadnPixels(GLint, GLint, GLsizei, GLsizei, GLenum, GLenum, GLsizei, void*)' redeclared as different kind of entity
 1784 | GL_APICALL void GL_APIENTRY glReadnPixels (GLint x, GLint y, GLsizei width, GLsizei height, GLenum format, GLenum type, GLsizei bufSize, void *data);
      |                                                                                                                                                    ^
/usr/include/GL/glew.h:24432:38: note: previous declaration 'void (* __glewReadnPixels)(GLint, GLint, GLsizei, GLsizei, GLenum, GLenum, GLsizei, void*)'
24432 | GLEW_FUN_EXPORT PFNGLREADNPIXELSPROC __glewReadnPixels;
      |                                      ^~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1785:110: error: 'void __glewGetnUniformfv(GLuint, GLint, GLsizei, GLfloat*)' redeclared as different kind of entity
 1785 | GL_APICALL void GL_APIENTRY glGetnUniformfv (GLuint program, GLint location, GLsizei bufSize, GLfloat *params);
      |                                                                                                              ^
/usr/include/GL/glew.h:24429:40: note: previous declaration 'void (* __glewGetnUniformfv)(GLuint, GLint, GLsizei, GLfloat*)'
24429 | GLEW_FUN_EXPORT PFNGLGETNUNIFORMFVPROC __glewGetnUniformfv;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1786:108: error: 'void __glewGetnUniformiv(GLuint, GLint, GLsizei, GLint*)' redeclared as different kind of entity
 1786 | GL_APICALL void GL_APIENTRY glGetnUniformiv (GLuint program, GLint location, GLsizei bufSize, GLint *params);
      |                                                                                                            ^
/usr/include/GL/glew.h:24430:40: note: previous declaration 'void (* __glewGetnUniformiv)(GLuint, GLint, GLsizei, GLint*)'
24430 | GLEW_FUN_EXPORT PFNGLGETNUNIFORMIVPROC __glewGetnUniformiv;
      |                                        ^~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1787:110: error: 'void __glewGetnUniformuiv(GLuint, GLint, GLsizei, GLuint*)' redeclared as different kind of entity
 1787 | GL_APICALL void GL_APIENTRY glGetnUniformuiv (GLuint program, GLint location, GLsizei bufSize, GLuint *params);
      |                                                                                                              ^
/usr/include/GL/glew.h:24431:41: note: previous declaration 'void (* __glewGetnUniformuiv)(GLuint, GLint, GLsizei, GLuint*)'
24431 | GLEW_FUN_EXPORT PFNGLGETNUNIFORMUIVPROC __glewGetnUniformuiv;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1788:62: error: 'void __glewMinSampleShading(GLfloat)' redeclared as different kind of entity
 1788 | GL_APICALL void GL_APIENTRY glMinSampleShading (GLfloat value);
      |                                                              ^
/usr/include/GL/glew.h:22573:43: note: previous declaration 'void (* __glewMinSampleShading)(GLclampf)'
22573 | GLEW_FUN_EXPORT PFNGLMINSAMPLESHADINGPROC __glewMinSampleShading;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1789:73: error: 'void __glewPatchParameteri(GLenum, GLint)' redeclared as different kind of entity
 1789 | GL_APICALL void GL_APIENTRY glPatchParameteri (GLenum pname, GLint value);
      |                                                                         ^
/usr/include/GL/glew.h:23297:42: note: previous declaration 'void (* __glewPatchParameteri)(GLenum, GLint)'
23297 | GLEW_FUN_EXPORT PFNGLPATCHPARAMETERIPROC __glewPatchParameteri;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1790:96: error: 'void __glewTexParameterIiv(GLenum, GLenum, const GLint*)' redeclared as different kind of entity
 1790 | GL_APICALL void GL_APIENTRY glTexParameterIiv (GLenum target, GLenum pname, const GLint *params);
      |                                                                                                ^
/usr/include/GL/glew.h:22525:42: note: previous declaration 'void (* __glewTexParameterIiv)(GLenum, GLenum, const GLint*)'
22525 | GLEW_FUN_EXPORT PFNGLTEXPARAMETERIIVPROC __glewTexParameterIiv;
      |                                          ^~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1791:98: error: 'void __glewTexParameterIuiv(GLenum, GLenum, const GLuint*)' redeclared as different kind of entity
 1791 | GL_APICALL void GL_APIENTRY glTexParameterIuiv (GLenum target, GLenum pname, const GLuint *params);
      |                                                                                                  ^
/usr/include/GL/glew.h:22526:43: note: previous declaration 'void (* __glewTexParameterIuiv)(GLenum, GLenum, const GLuint*)'
22526 | GLEW_FUN_EXPORT PFNGLTEXPARAMETERIUIVPROC __glewTexParameterIuiv;
      |                                           ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1792:93: error: 'void __glewGetTexParameterIiv(GLenum, GLenum, GLint*)' redeclared as different kind of entity
 1792 | GL_APICALL void GL_APIENTRY glGetTexParameterIiv (GLenum target, GLenum pname, GLint *params);
      |                                                                                             ^
/usr/include/GL/glew.h:22518:45: note: previous declaration 'void (* __glewGetTexParameterIiv)(GLenum, GLenum, GLint*)'
22518 | GLEW_FUN_EXPORT PFNGLGETTEXPARAMETERIIVPROC __glewGetTexParameterIiv;
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1793:95: error: 'void __glewGetTexParameterIuiv(GLenum, GLenum, GLuint*)' redeclared as different kind of entity
 1793 | GL_APICALL void GL_APIENTRY glGetTexParameterIuiv (GLenum target, GLenum pname, GLuint *params);
      |                                                                                               ^
/usr/include/GL/glew.h:22519:46: note: previous declaration 'void (* __glewGetTexParameterIuiv)(GLenum, GLenum, GLuint*)'
22519 | GLEW_FUN_EXPORT PFNGLGETTEXPARAMETERIUIVPROC __glewGetTexParameterIuiv;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1794:100: error: 'void __glewSamplerParameterIiv(GLuint, GLenum, const GLint*)' redeclared as different kind of entity
 1794 | GL_APICALL void GL_APIENTRY glSamplerParameterIiv (GLuint sampler, GLenum pname, const GLint *param);
      |                                                                                                    ^
/usr/include/GL/glew.h:23153:46: note: previous declaration 'void (* __glewSamplerParameterIiv)(GLuint, GLenum, const GLint*)'
23153 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERIIVPROC __glewSamplerParameterIiv;
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1795:102: error: 'void __glewSamplerParameterIuiv(GLuint, GLenum, const GLuint*)' redeclared as different kind of entity
 1795 | GL_APICALL void GL_APIENTRY glSamplerParameterIuiv (GLuint sampler, GLenum pname, const GLuint *param);
      |                                                                                                      ^
/usr/include/GL/glew.h:23154:47: note: previous declaration 'void (* __glewSamplerParameterIuiv)(GLuint, GLenum, const GLuint*)'
23154 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERIUIVPROC __glewSamplerParameterIuiv;
      |                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1796:98: error: 'void __glewGetSamplerParameterIiv(GLuint, GLenum, GLint*)' redeclared as different kind of entity
 1796 | GL_APICALL void GL_APIENTRY glGetSamplerParameterIiv (GLuint sampler, GLenum pname, GLint *params);
      |                                                                                                  ^
/usr/include/GL/glew.h:23148:49: note: previous declaration 'void (* __glewGetSamplerParameterIiv)(GLuint, GLenum, GLint*)'
23148 | GLEW_FUN_EXPORT PFNGLGETSAMPLERPARAMETERIIVPROC __glewGetSamplerParameterIiv;
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1797:100: error: 'void __glewGetSamplerParameterIuiv(GLuint, GLenum, GLuint*)' redeclared as different kind of entity
 1797 | GL_APICALL void GL_APIENTRY glGetSamplerParameterIuiv (GLuint sampler, GLenum pname, GLuint *params);
      |                                                                                                    ^
/usr/include/GL/glew.h:23149:50: note: previous declaration 'void (* __glewGetSamplerParameterIuiv)(GLuint, GLenum, GLuint*)'
23149 | GLEW_FUN_EXPORT PFNGLGETSAMPLERPARAMETERIUIVPROC __glewGetSamplerParameterIuiv;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1798:93: error: 'void __glewTexBuffer(GLenum, GLenum, GLuint)' redeclared as different kind of entity
 1798 | GL_APICALL void GL_APIENTRY glTexBuffer (GLenum target, GLenum internalformat, GLuint buffer);
      |                                                                                             ^
/usr/include/GL/glew.h:22561:36: note: previous declaration 'void (* __glewTexBuffer)(GLenum, GLenum, GLuint)'
22561 | GLEW_FUN_EXPORT PFNGLTEXBUFFERPROC __glewTexBuffer;
      |                                    ^~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1799:132: error: 'void __glewTexBufferRange(GLenum, GLenum, GLuint, GLintptr, GLsizeiptr)' redeclared as different kind of entity
 1799 | GL_APICALL void GL_APIENTRY glTexBufferRange (GLenum target, GLenum internalformat, GLuint buffer, GLintptr offset, GLsizeiptr size);
      |                                                                                                                                    ^
/usr/include/GL/glew.h:23303:41: note: previous declaration 'void (* __glewTexBufferRange)(GLenum, GLenum, GLuint, GLintptr, GLsizeiptr)'
23303 | GLEW_FUN_EXPORT PFNGLTEXBUFFERRANGEPROC __glewTexBufferRange;
      |                                         ^~~~~~~~~~~~~~~~~~~~
/usr/include/GLES3/gl32.h:1800:187: error: 'void __glewTexStorage3DMultisample(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLsizei, GLboolean)' redeclared as different kind of entity
 1800 | GL_APICALL void GL_APIENTRY glTexStorage3DMultisample (GLenum target, GLsizei samples, GLenum internalformat, GLsizei width, GLsizei height, GLsizei depth, GLboolean fixedsamplelocations);
      |                                                                                                                                                                                           ^
/usr/include/GL/glew.h:23324:50: note: previous declaration 'void (* __glewTexStorage3DMultisample)(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLsizei, GLboolean)'
23324 | GLEW_FUN_EXPORT PFNGLTEXSTORAGE3DMULTISAMPLEPROC __glewTexStorage3DMultisample;
      |                                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderSetup.h:13:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat()':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:53:49: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   53 |                                                 pixelFormat(PixelFormat::RGB_32)
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:16:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:38: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |                         PixelFormat &operator=(const PixelFormat &f)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:60:49: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   60 |                                                 pixelFormat(pixelFormat)
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:38: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |                         PixelFormat &operator=(const PixelFormat &f)
      |                                      ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor 'BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/renderTarget.h:69:49: warning: implicitly-declared 'constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)' is deprecated [-Wdeprecated-copy]
   69 |                                                 pixelFormat(pixelFormat)
      |                                                 ^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/VIEW/RENDERING/pixelFormat.h:162:38: note: because 'BALL::VIEW::PixelFormat' has user-provided 'BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)'
  162 |                         PixelFormat &operator=(const PixelFormat &f)
      |                                      ^~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/DATATYPE/string.h:15,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:2:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro 'BALL_CREATE'
   43 |                 BALL_CREATE(MMFF94ParametersBase)
      |                 ^~~~~~~~~~~
In file included from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94.h:25,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/../../../include/BALL/VIEW/WIDGETS/molecularStructure.h:57,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:10,
                 from /build/reproducible-path/ball-1.5.0+git20180813.37fc53c/build/VIEW_autogen/mocs_compilation.cpp:76:
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because 'BALL::MMFF94StretchParameters' has user-provided 'const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)'
  226 |                 const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  185 |         class BALL_EXPORT MMFF94StretchParameters:
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro 'BALL_CREATE'
  217 |                 BALL_CREATE(MMFF94StretchParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because 'BALL::MMFF94BendParameters' has user-provided 'const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)'
  280 |                 const MMFF94BendParameters& operator = (const MMFF94BendParameters& param)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  263 |         class BALL_EXPORT MMFF94BendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94BendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro 'BALL_CREATE'
  271 |                 BALL_CREATE(MMFF94BendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because 'BALL::MMFF94StretchBendParameters' has user-provided 'const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)'
  327 |                 const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param)
      |                                                    ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  310 |         class BALL_EXPORT MMFF94StretchBendParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro 'BALL_CREATE'
  318 |                 BALL_CREATE(MMFF94StretchBendParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because 'BALL::MMFF94TorsionParameters' has user-provided 'const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)'
  383 |                 const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param)
      |                                                ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  366 |         class BALL_EXPORT MMFF94TorsionParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro 'BALL_CREATE'
  374 |                 BALL_CREATE(MMFF94TorsionParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because 'BALL::MMFF94PlaneParameters' has user-provided 'const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)'
  431 |                 const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param)
      |                                              ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  414 |         class BALL_EXPORT MMFF94PlaneParameters
      |                           ^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro 'BALL_CREATE'
  422 |                 BALL_CREATE(MMFF94PlaneParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because 'BALL::MMFF94VDWParameters' has user-provided 'const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)'
  482 |                 const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param)
      |                                            ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  458 |         class BALL_EXPORT MMFF94VDWParameters
      |                           ^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro 'BALL_CREATE'
  473 |                 BALL_CREATE(MMFF94VDWParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' is deprecated [-Wdeprecated-copy]
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because 'BALL::MMFF94ESParameters' has user-provided 'const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)'
  539 |                 const MMFF94ESParameters& operator = (const MMFF94ESParameters& param)
      |                                           ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared 'constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)' is deprecated [-Wdeprecated-copy]
  525 |         class BALL_EXPORT MMFF94ESParameters
      |                           ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because 'BALL::MMFF94ParametersBase' has user-provided 'const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)'
   52 |                 const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&)
      |                                             ^~~~~~~~
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function 'virtual void* BALL::MMFF94ESParameters::create(bool, bool) const':
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/COMMON/create.h:73:52: note: synthesized method 'BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)' first required here
   73 |                         ptr = (void*)new name(*this);\
      |                                                    ^
/build/reproducible-path/ball-1.5.0+git20180813.37fc53c/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro 'BALL_CREATE'
  530 |                 BALL_CREATE(MMFF94ESParameters)
      |                 ^~~~~~~~~~~
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