I: pbuilder: network access will be disabled during build
I: Current time: Sun Nov 24 04:11:05 +14 2024
I: pbuilder-time-stamp: 1732371065
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [barclay_5.0.0+dfsg-1.dsc]
I: copying [./barclay_5.0.0+dfsg.orig.tar.xz]
I: copying [./barclay_5.0.0+dfsg-1.debian.tar.xz]
I: Extracting source
gpgv: Signature made Tue Jun 20 13:07:16 2023 
gpgv:                using RSA key 33CB284313E90BD27DCB4523600316A6DC277476
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./barclay_5.0.0+dfsg-1.dsc: no acceptable signature found
dpkg-source: info: extracting barclay in barclay-5.0.0+dfsg
dpkg-source: info: unpacking barclay_5.0.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking barclay_5.0.0+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fix_debian_build.patch
dpkg-source: info: applying fix_dataprovider.patch
dpkg-source: info: applying com_sun_javadoc_removal_in_openjdk17.patch
dpkg-source: info: applying ignore_flaky_tests.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/25729/tmp/hooks/D01_modify_environment starting
debug: Running on virt64a.
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
'/bin/sh' -> '/bin/bash'
lrwxrwxrwx 1 root root 9 Nov 23 14:11 /bin/sh -> /bin/bash
I: Setting pbuilder2's login shell to /bin/bash
I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
I: user script /srv/workspace/pbuilder/25729/tmp/hooks/D01_modify_environment finished
I: user script /srv/workspace/pbuilder/25729/tmp/hooks/D02_print_environment starting
I: set
  BASH=/bin/sh
  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
  BASH_ALIASES=()
  BASH_ARGC=()
  BASH_ARGV=()
  BASH_CMDS=()
  BASH_LINENO=([0]="12" [1]="0")
  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
  BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf")
  BASH_VERSION='5.2.32(1)-release'
  BUILDDIR=/build/reproducible-path
  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
  BUILDUSERNAME=pbuilder2
  BUILD_ARCH=armhf
  DEBIAN_FRONTEND=noninteractive
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 '
  DIRSTACK=()
  DISTRIBUTION=unstable
  EUID=0
  FUNCNAME=([0]="Echo" [1]="main")
  GROUPS=()
  HOME=/root
  HOSTNAME=i-capture-the-hostname
  HOSTTYPE=arm
  HOST_ARCH=armhf
  IFS=' 	
  '
  INVOCATION_ID=1202aad725fe400bbd2611a04f92766d
  LANG=C
  LANGUAGE=it_CH:it
  LC_ALL=C
  MACHTYPE=arm-unknown-linux-gnueabihf
  MAIL=/var/mail/root
  OPTERR=1
  OPTIND=1
  OSTYPE=linux-gnueabihf
  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
  PBCURRENTCOMMANDLINEOPERATION=build
  PBUILDER_OPERATION=build
  PBUILDER_PKGDATADIR=/usr/share/pbuilder
  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
  PBUILDER_SYSCONFDIR=/etc
  PIPESTATUS=([0]="0")
  POSIXLY_CORRECT=y
  PPID=25729
  PS4='+ '
  PWD=/
  SHELL=/bin/bash
  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
  SHLVL=3
  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.NCjdV6bj/pbuilderrc_eSeo --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.NCjdV6bj/b2 --logfile b2/build.log barclay_5.0.0+dfsg-1.dsc'
  SUDO_GID=114
  SUDO_UID=108
  SUDO_USER=jenkins
  TERM=unknown
  TZ=/usr/share/zoneinfo/Etc/GMT-14
  UID=0
  USER=root
  _='I: set'
  http_proxy=http://10.0.0.15:3142/
I: uname -a
  Linux i-capture-the-hostname 6.1.0-27-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/25729/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: armhf
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: default-jdk-headless, debhelper-compat (= 13), javahelper, gradle-debian-helper, maven-repo-helper, libfreemarker-java, libjoptsimple-java, liblog4j2-java, libgoogle-gson-java, libmockito-java, testng, libjacoco-java, default-jdk-doc
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19686 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on default-jdk-headless; however:
  Package default-jdk-headless is not installed.
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on javahelper; however:
  Package javahelper is not installed.
 pbuilder-satisfydepends-dummy depends on gradle-debian-helper; however:
  Package gradle-debian-helper is not installed.
 pbuilder-satisfydepends-dummy depends on maven-repo-helper; however:
  Package maven-repo-helper is not installed.
 pbuilder-satisfydepends-dummy depends on libfreemarker-java; however:
  Package libfreemarker-java is not installed.
 pbuilder-satisfydepends-dummy depends on libjoptsimple-java; however:
  Package libjoptsimple-java is not installed.
 pbuilder-satisfydepends-dummy depends on liblog4j2-java; however:
  Package liblog4j2-java is not installed.
 pbuilder-satisfydepends-dummy depends on libgoogle-gson-java; however:
  Package libgoogle-gson-java is not installed.
 pbuilder-satisfydepends-dummy depends on libmockito-java; however:
  Package libmockito-java is not installed.
 pbuilder-satisfydepends-dummy depends on testng; however:
  Package testng is not installed.
 pbuilder-satisfydepends-dummy depends on libjacoco-java; however:
  Package libjacoco-java is not installed.
 pbuilder-satisfydepends-dummy depends on default-jdk-doc; however:
  Package default-jdk-doc is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  ant{a} ant-optional{a} antlr{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} binfmt-support{a} bnd{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} dctrl-tools{a} debhelper{a} default-jdk-doc{a} default-jdk-headless{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dirmngr{a} dwz{a} fastjar{a} file{a} gettext{a} gettext-base{a} gnupg{a} gnupg-l10n{a} gpg{a} gpg-agent{a} gpgconf{a} gpgsm{a} gradle{a} gradle-debian-helper{a} groff-base{a} groovy{a} intltool-debian{a} ivy{a} jarwrapper{a} java-common{a} java-wrappers{a} javahelper{a} junit4{a} libantlr-java{a} libaopalliance-java{a} libapache-pom-java{a} libarchive-zip-perl{a} libasm-java{a} libassuan9{a} libatinject-jsr330-api-java{a} libb-hooks-op-check-perl{a} libbcel-java{a} libbcpg-java{a} libbcprov-java{a} libbsf-java{a} libbsh-java{a} libbyte-buddy-java{a} libcdi-api-java{a} libclass-method-modifiers-perl{a} libclass-xsaccessor-perl{a} libclone-perl{a} libcom-err2{a} libcommons-cli-java{a} libcommons-codec-java{a} libcommons-collections3-java{a} libcommons-compress-java{a} libcommons-io-java{a} libcommons-lang-java{a} libcommons-lang3-java{a} libcommons-logging-java{a} libcommons-parent-java{a} libdd-plist-java{a} libdebhelper-perl{a} libdevel-callchecker-perl{a} libdom4j-java{a} libdynaloader-functions-perl{a} libeclipse-jdt-annotation-java{a} libel-api-java{a} libelf1t64{a} libencode-locale-perl{a} liberror-prone-java{a} libexpat1{a} libfelix-framework-java{a} libfelix-gogo-runtime-java{a} libfelix-resolver-java{a} libfile-dirlist-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-touch-perl{a} libfile-which-perl{a} libfindbugs-java{a} libfreemarker-java{a} libgeronimo-annotation-1.3-spec-java{a} libgeronimo-interceptor-3.0-spec-java{a} libgoogle-gson-java{a} libgradle-core-java{a} libgradle-plugins-java{a} libgssapi-krb5-2{a} libguava-java{a} libguice-java{a} libhamcrest-java{a} libhawtjni-runtime-java{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhttpclient-java{a} libhttpcore-java{a} libicu72{a} libimport-into-perl{a} libio-html-perl{a} libio-pty-perl{a} libio-socket-ssl-perl{a} libipc-run-perl{a} libjacoco-java{a} libjansi-java{a} libjansi-native-java{a} libjansi1-java{a} libjarjar-java{a} libjatl-java{a} libjavaewah-java{a} libjaxen-java{a} libjcifs-java{a} libjcip-annotations-java{a} libjcommander-java{a} libjetty9-java{a} libjformatstring-java{a} libjgit-java{a} libjline2-java{a} libjna-java{a} libjna-jni{a} libjoptsimple-java{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-jquery-ui-theme-base{a} libjsch-java{a} libjsoup-java{a} libjsp-api-java{a} libjsr305-java{a} libjunixsocket-java{a} libjunixsocket-jni{a} libjzlib-java{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libkryo-java{a} libksba8{a} liblcms2-2{a} libldap-2.5-0{a} liblightcouch-java{a} liblog4j2-java{a} liblogback-java{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmaven-parent-java{a} libmaven-resolver-1.6-java{a} libmaven-resolver-java{a} libmaven-shared-utils-java{a} libmaven3-core-java{a} libminlog-java{a} libmockito-java{a} libmodule-runtime-perl{a} libmongodb-java{a} libmoo-perl{a} libnative-platform-java{a} libnative-platform-jni{a} libnekohtml-java{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnpth0t64{a} libnsl2{a} libnspr4{a} libnss3{a} libobjenesis-java{a} libosgi-annotation-java{a} libosgi-compendium-java{a} libosgi-core-java{a} libparams-classify-perl{a} libpcsclite1{a} libpipeline1{a} libplexus-cipher-java{a} libplexus-classworlds-java{a} libplexus-component-annotations-java{a} libplexus-container-default-java{a} libplexus-interpolation-java{a} libplexus-sec-dispatcher-java{a} libplexus-utils2-java{a} libpolyglot-maven-java{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libqdox-java{a} libreadline8t64{a} libreflectasm-java{a} librhino-java{a} librole-tiny-perl{a} libsasl2-2{a} libsasl2-modules-db{a} libservlet-api-java{a} libsimple-http-java{a} libsisu-inject-java{a} libsisu-plexus-java{a} libslf4j-java{a} libsub-quote-perl{a} libtimedate-perl{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwagon-file-java{a} libwagon-http-java{a} libwagon-provider-api-java{a} libwebsocket-api-java{a} libwww-perl{a} libwww-robotrules-perl{a} libxbean-reflect-java{a} libxerces2-java{a} libxml-commons-external-java{a} libxml-commons-resolver1.1-java{a} libxml2{a} libxpp3-java{a} libxstream-java{a} libxz-java{a} libyaml-snake-java{a} m4{a} man-db{a} maven-repo-helper{a} media-types{a} netbase{a} openjdk-21-doc{a} openjdk-21-jdk-headless{a} openjdk-21-jre-headless{a} openssl{a} patchutils{a} perl-openssl-defaults{a} pinentry-curses{a} po-debconf{a} python3{a} python3-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} testng{a} tzdata{a} unzip{a} wdiff{a} 
The following packages are RECOMMENDED but will NOT be installed:
  curl debian-keyring dput dput-ng dupload equivs gnupg-utils gpg-wks-client javascript-common krb5-locales libarchive-cpio-perl libasound2t64 libbindex-java libcups2t64 libdata-dump-perl libdistro-info-perl libfontconfig1 libfreetype6 libgit-wrapper-perl libgitlab-api-v4-perl libgpars-groovy-java libharfbuzz0b libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libio-compress-brotli-perl libjson-perl libldap-common liblist-compare-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libnamespace-clean-perl liboss4-salsa-asound2 libreflectasm-java-doc libsasl2-modules libsoap-lite-perl libstring-shellquote-perl libxstring-perl licensecheck lintian lynx pristine-tar python3-apt python3-debian python3-magic python3-requests python3-unidiff python3-xdg strace wget 
0 packages upgraded, 257 newly installed, 0 to remove and 0 not upgraded.
Need to get 255 MB of archives. After unpacking 809 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB]
Get: 2 http://deb.debian.org/debian unstable/main armhf binfmt-support armhf 2.2.2-7 [55.3 kB]
Get: 3 http://deb.debian.org/debian unstable/main armhf libpython3.12-minimal armhf 3.12.7-3 [800 kB]
Get: 4 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB]
Get: 5 http://deb.debian.org/debian unstable/main armhf python3.12-minimal armhf 3.12.7-3 [1808 kB]
Get: 6 http://deb.debian.org/debian unstable/main armhf python3-minimal armhf 3.12.7-1 [26.8 kB]
Get: 7 http://deb.debian.org/debian unstable/main armhf media-types all 10.1.0 [26.9 kB]
Get: 8 http://deb.debian.org/debian unstable/main armhf netbase all 6.4 [12.8 kB]
Get: 9 http://deb.debian.org/debian unstable/main armhf tzdata all 2024b-3 [255 kB]
Get: 10 http://deb.debian.org/debian unstable/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB]
Get: 11 http://deb.debian.org/debian unstable/main armhf libcom-err2 armhf 1.47.1-1+b1 [22.3 kB]
Get: 12 http://deb.debian.org/debian unstable/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB]
Get: 13 http://deb.debian.org/debian unstable/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B]
Get: 14 http://deb.debian.org/debian unstable/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB]
Get: 15 http://deb.debian.org/debian unstable/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB]
Get: 16 http://deb.debian.org/debian unstable/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get: 17 http://deb.debian.org/debian unstable/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3+b1 [71.3 kB]
Get: 18 http://deb.debian.org/debian unstable/main armhf libnsl2 armhf 1.3.0-3+b3 [35.0 kB]
Get: 19 http://deb.debian.org/debian unstable/main armhf readline-common all 8.2-5 [69.3 kB]
Get: 20 http://deb.debian.org/debian unstable/main armhf libreadline8t64 armhf 8.2-5 [146 kB]
Get: 21 http://deb.debian.org/debian unstable/main armhf libpython3.12-stdlib armhf 3.12.7-3 [1819 kB]
Get: 22 http://deb.debian.org/debian unstable/main armhf python3.12 armhf 3.12.7-3 [671 kB]
Get: 23 http://deb.debian.org/debian unstable/main armhf libpython3-stdlib armhf 3.12.7-1 [9712 B]
Get: 24 http://deb.debian.org/debian unstable/main armhf python3 armhf 3.12.7-1 [27.8 kB]
Get: 25 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.24 [24.8 kB]
Get: 26 http://deb.debian.org/debian unstable/main armhf openssl armhf 3.3.2-2 [1348 kB]
Get: 27 http://deb.debian.org/debian unstable/main armhf ca-certificates all 20240203 [158 kB]
Get: 28 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB]
Get: 29 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB]
Get: 30 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3+b1 [42.3 kB]
Get: 31 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.22.5-2 [195 kB]
Get: 32 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB]
Get: 33 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-5 [1091 kB]
Get: 34 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40.2-11 [83.6 kB]
Get: 35 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.13.0-1 [1382 kB]
Get: 36 http://deb.debian.org/debian unstable/main armhf ca-certificates-java all 20240118 [11.6 kB]
Get: 37 http://deb.debian.org/debian unstable/main armhf java-common all 0.76 [6776 B]
Get: 38 http://deb.debian.org/debian unstable/main armhf liblcms2-2 armhf 2.16-2 [131 kB]
Get: 39 http://deb.debian.org/debian unstable/main armhf libjpeg62-turbo armhf 1:2.1.5-3+b1 [145 kB]
Get: 40 http://deb.debian.org/debian unstable/main armhf libnspr4 armhf 2:4.36-1 [87.8 kB]
Get: 41 http://deb.debian.org/debian unstable/main armhf libnss3 armhf 2:3.106-1 [1204 kB]
Get: 42 http://deb.debian.org/debian unstable/main armhf libpcsclite1 armhf 2.3.0-3 [51.7 kB]
Get: 43 http://deb.debian.org/debian unstable/main armhf openjdk-21-jre-headless armhf 21.0.5+11-1 [35.6 MB]
Get: 44 http://deb.debian.org/debian unstable/main armhf default-jre-headless armhf 2:1.21-76 [3192 B]
Get: 45 http://deb.debian.org/debian unstable/main armhf ant all 1.10.15-1 [2163 kB]
Get: 46 http://deb.debian.org/debian unstable/main armhf ant-optional all 1.10.15-1 [456 kB]
Get: 47 http://deb.debian.org/debian unstable/main armhf libantlr-java all 2.7.7+dfsg-14 [458 kB]
Get: 48 http://deb.debian.org/debian unstable/main armhf antlr all 2.7.7+dfsg-14 [8376 B]
Get: 49 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-4 [264 kB]
Get: 50 http://deb.debian.org/debian unstable/main armhf autoconf all 2.72-3 [493 kB]
Get: 51 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get: 52 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get: 53 http://deb.debian.org/debian unstable/main armhf autopoint all 0.22.5-2 [723 kB]
Get: 54 http://deb.debian.org/debian unstable/main armhf unzip armhf 6.0-28 [152 kB]
Get: 55 http://deb.debian.org/debian unstable/main armhf java-wrappers all 0.5 [8848 B]
Get: 56 http://deb.debian.org/debian unstable/main armhf libhamcrest-java all 2.2-2 [121 kB]
Get: 57 http://deb.debian.org/debian unstable/main armhf junit4 all 4.13.2-5 [350 kB]
Get: 58 http://deb.debian.org/debian unstable/main armhf libfelix-framework-java all 4.6.1-2.1 [569 kB]
Get: 59 http://deb.debian.org/debian unstable/main armhf libfelix-gogo-runtime-java all 0.16.2-1.1 [114 kB]
Get: 60 http://deb.debian.org/debian unstable/main armhf libosgi-annotation-java all 8.1.0-1 [9436 B]
Get: 61 http://deb.debian.org/debian unstable/main armhf libosgi-core-java all 8.0.0-2 [182 kB]
Get: 62 http://deb.debian.org/debian unstable/main armhf libfelix-resolver-java all 1.16.0-1 [180 kB]
Get: 63 http://deb.debian.org/debian unstable/main armhf libhawtjni-runtime-java all 1.18-1 [36.3 kB]
Get: 64 http://deb.debian.org/debian unstable/main armhf libjansi-native-java all 1.8-2 [26.0 kB]
Get: 65 http://deb.debian.org/debian unstable/main armhf libjansi1-java all 1.18-3 [66.5 kB]
Get: 66 http://deb.debian.org/debian unstable/main armhf libjline2-java all 2.14.6-5 [151 kB]
Get: 67 http://deb.debian.org/debian unstable/main armhf libosgi-compendium-java all 7.0.0-1 [477 kB]
Get: 68 http://deb.debian.org/debian unstable/main armhf libslf4j-java all 1.7.32-1 [144 kB]
Get: 69 http://deb.debian.org/debian unstable/main armhf libxz-java all 1.9-1 [143 kB]
Get: 70 http://deb.debian.org/debian unstable/main armhf libyaml-snake-java all 1.33-2 [321 kB]
Get: 71 http://deb.debian.org/debian unstable/main armhf bnd all 5.0.1-5 [10.1 MB]
Get: 72 http://deb.debian.org/debian unstable/main armhf dctrl-tools armhf 2.24-3 [96.0 kB]
Get: 73 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.20 [89.7 kB]
Get: 74 http://deb.debian.org/debian unstable/main armhf libtool all 2.4.7-8 [517 kB]
Get: 75 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB]
Get: 76 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get: 77 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get: 78 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get: 79 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.192-4 [184 kB]
Get: 80 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB]
Get: 81 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-5+b1 [9088 kB]
Get: 82 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB]
Get: 83 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.22.5-2 [1485 kB]
Get: 84 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 85 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get: 86 http://deb.debian.org/debian unstable/main armhf debhelper all 13.20 [915 kB]
Get: 87 http://deb.debian.org/debian unstable/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 88 http://deb.debian.org/debian unstable/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 89 http://deb.debian.org/debian unstable/main armhf libjs-jquery-ui-theme-base all 1.12.1+dfsg-1.1 [44.3 kB]
Get: 90 http://deb.debian.org/debian unstable/main armhf openjdk-21-doc all 21.0.5+11-1 [13.2 MB]
Get: 91 http://deb.debian.org/debian unstable/main armhf default-jdk-doc armhf 2:1.21-76 [3260 B]
Get: 92 http://deb.debian.org/debian unstable/main armhf openjdk-21-jdk-headless armhf 21.0.5+11-1 [78.3 MB]
Get: 93 http://deb.debian.org/debian unstable/main armhf default-jdk-headless armhf 2:1.21-76 [1124 B]
Get: 94 http://deb.debian.org/debian unstable/main armhf libassuan9 armhf 3.0.1-2 [53.7 kB]
Get: 95 http://deb.debian.org/debian unstable/main armhf gpgconf armhf 2.2.45-2 [104 kB]
Get: 96 http://deb.debian.org/debian unstable/main armhf libksba8 armhf 1.6.7-2+b1 [115 kB]
Get: 97 http://deb.debian.org/debian unstable/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8 [18.2 kB]
Get: 98 http://deb.debian.org/debian unstable/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8 [50.2 kB]
Get: 99 http://deb.debian.org/debian unstable/main armhf libldap-2.5-0 armhf 2.5.18+dfsg-3+b1 [163 kB]
Get: 100 http://deb.debian.org/debian unstable/main armhf libnpth0t64 armhf 1.6-3.1+b1 [17.1 kB]
Get: 101 http://deb.debian.org/debian unstable/main armhf dirmngr armhf 2.2.45-2 [322 kB]
Get: 102 http://deb.debian.org/debian unstable/main armhf gnupg-l10n all 2.2.45-2 [705 kB]
Get: 103 http://deb.debian.org/debian unstable/main armhf gpg armhf 2.2.45-2 [463 kB]
Get: 104 http://deb.debian.org/debian unstable/main armhf pinentry-curses armhf 1.2.1-4+b1 [76.1 kB]
Get: 105 http://deb.debian.org/debian unstable/main armhf gpg-agent armhf 2.2.45-2 [210 kB]
Get: 106 http://deb.debian.org/debian unstable/main armhf gpgsm armhf 2.2.45-2 [218 kB]
Get: 107 http://deb.debian.org/debian unstable/main armhf gnupg all 2.2.45-2 [376 kB]
Get: 108 http://deb.debian.org/debian unstable/main armhf libfile-dirlist-perl all 0.05-3 [7600 B]
Get: 109 http://deb.debian.org/debian unstable/main armhf libfile-which-perl all 1.27-2 [15.1 kB]
Get: 110 http://deb.debian.org/debian unstable/main armhf libfile-homedir-perl all 1.006-2 [42.4 kB]
Get: 111 http://deb.debian.org/debian unstable/main armhf libfile-touch-perl all 0.12-2 [8816 B]
Get: 112 http://deb.debian.org/debian unstable/main armhf libio-pty-perl armhf 1:1.20-1+b2 [33.8 kB]
Get: 113 http://deb.debian.org/debian unstable/main armhf libipc-run-perl all 20231003.0-2 [101 kB]
Get: 114 http://deb.debian.org/debian unstable/main armhf libclass-method-modifiers-perl all 2.15-1 [18.0 kB]
Get: 115 http://deb.debian.org/debian unstable/main armhf libclass-xsaccessor-perl armhf 1.19-4+b4 [35.1 kB]
Get: 116 http://deb.debian.org/debian unstable/main armhf libb-hooks-op-check-perl armhf 0.22-3+b2 [10.3 kB]
Get: 117 http://deb.debian.org/debian unstable/main armhf libdynaloader-functions-perl all 0.004-1 [12.1 kB]
Get: 118 http://deb.debian.org/debian unstable/main armhf libdevel-callchecker-perl armhf 0.009-1+b1 [16.0 kB]
Get: 119 http://deb.debian.org/debian unstable/main armhf libparams-classify-perl armhf 0.015-2+b4 [21.2 kB]
Get: 120 http://deb.debian.org/debian unstable/main armhf libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get: 121 http://deb.debian.org/debian unstable/main armhf libimport-into-perl all 1.002005-2 [11.3 kB]
Get: 122 http://deb.debian.org/debian unstable/main armhf librole-tiny-perl all 2.002004-1 [21.4 kB]
Get: 123 http://deb.debian.org/debian unstable/main armhf libsub-quote-perl all 2.006008-1 [21.8 kB]
Get: 124 http://deb.debian.org/debian unstable/main armhf libmoo-perl all 2.005005-1 [58.0 kB]
Get: 125 http://deb.debian.org/debian unstable/main armhf libencode-locale-perl all 1.05-3 [12.9 kB]
Get: 126 http://deb.debian.org/debian unstable/main armhf libtimedate-perl all 2.3300-2 [39.3 kB]
Get: 127 http://deb.debian.org/debian unstable/main armhf libhttp-date-perl all 6.06-1 [10.7 kB]
Get: 128 http://deb.debian.org/debian unstable/main armhf libfile-listing-perl all 6.16-1 [12.4 kB]
Get: 129 http://deb.debian.org/debian unstable/main armhf libhtml-tagset-perl all 3.24-1 [14.7 kB]
Get: 130 http://deb.debian.org/debian unstable/main armhf liburi-perl all 5.30-1 [105 kB]
Get: 131 http://deb.debian.org/debian unstable/main armhf libhtml-parser-perl armhf 3.83-1+b1 [96.4 kB]
Get: 132 http://deb.debian.org/debian unstable/main armhf libhtml-tree-perl all 5.07-3 [211 kB]
Get: 133 http://deb.debian.org/debian unstable/main armhf libclone-perl armhf 0.47-1+b1 [13.3 kB]
Get: 134 http://deb.debian.org/debian unstable/main armhf libio-html-perl all 1.004-3 [16.2 kB]
Get: 135 http://deb.debian.org/debian unstable/main armhf liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get: 136 http://deb.debian.org/debian unstable/main armhf libhttp-message-perl all 7.00-2 [79.8 kB]
Get: 137 http://deb.debian.org/debian unstable/main armhf libhttp-cookies-perl all 6.11-1 [19.1 kB]
Get: 138 http://deb.debian.org/debian unstable/main armhf libhttp-negotiate-perl all 6.01-2 [13.1 kB]
Get: 139 http://deb.debian.org/debian unstable/main armhf perl-openssl-defaults armhf 7+b2 [6708 B]
Get: 140 http://deb.debian.org/debian unstable/main armhf libnet-ssleay-perl armhf 1.94-2 [319 kB]
Get: 141 http://deb.debian.org/debian unstable/main armhf libio-socket-ssl-perl all 2.089-1 [223 kB]
Get: 142 http://deb.debian.org/debian unstable/main armhf libnet-http-perl all 6.23-1 [23.9 kB]
Get: 143 http://deb.debian.org/debian unstable/main armhf liblwp-protocol-https-perl all 6.14-1 [10.8 kB]
Get: 144 http://deb.debian.org/debian unstable/main armhf libtry-tiny-perl all 0.32-1 [22.9 kB]
Get: 145 http://deb.debian.org/debian unstable/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get: 146 http://deb.debian.org/debian unstable/main armhf libwww-perl all 6.77-1 [183 kB]
Get: 147 http://deb.debian.org/debian unstable/main armhf patchutils armhf 0.4.2-1 [72.5 kB]
Get: 148 http://deb.debian.org/debian unstable/main armhf wdiff armhf 1.2.2-6 [118 kB]
Get: 149 http://deb.debian.org/debian unstable/main armhf devscripts all 2.24.3 [1079 kB]
Get: 150 http://deb.debian.org/debian unstable/main armhf fastjar armhf 2:0.98-7 [43.9 kB]
Get: 151 http://deb.debian.org/debian unstable/main armhf ivy all 2.5.2-1 [1295 kB]
Get: 152 http://deb.debian.org/debian unstable/main armhf libasm-java all 9.7.1-1 [391 kB]
Get: 153 http://deb.debian.org/debian unstable/main armhf libbsf-java all 1:2.4.0-8 [76.3 kB]
Get: 154 http://deb.debian.org/debian unstable/main armhf libcommons-cli-java all 1.6.0-1 [60.4 kB]
Get: 155 http://deb.debian.org/debian unstable/main armhf libapache-pom-java all 33-2 [5852 B]
Get: 156 http://deb.debian.org/debian unstable/main armhf libcommons-parent-java all 56-1 [10.8 kB]
Get: 157 http://deb.debian.org/debian unstable/main armhf libcommons-logging-java all 1.3.0-1 [68.6 kB]
Get: 158 http://deb.debian.org/debian unstable/main armhf libjansi-java all 2.4.1-2 [100 kB]
Get: 159 http://deb.debian.org/debian unstable/main armhf libjsp-api-java all 2.3.4-3 [53.7 kB]
Get: 160 http://deb.debian.org/debian unstable/main armhf libqdox-java all 1.12.1-4 [173 kB]
Get: 161 http://deb.debian.org/debian unstable/main armhf libservlet-api-java all 4.0.1-2 [81.0 kB]
Get: 162 http://deb.debian.org/debian unstable/main armhf libxpp3-java all 1.1.4c-3 [292 kB]
Get: 163 http://deb.debian.org/debian unstable/main armhf libxstream-java all 1.4.21-1 [567 kB]
Get: 164 http://deb.debian.org/debian unstable/main armhf groovy all 2.4.21-10 [12.8 MB]
Get: 165 http://deb.debian.org/debian unstable/main armhf libatinject-jsr330-api-java all 1.0+ds1-5 [5312 B]
Get: 166 http://deb.debian.org/debian unstable/main armhf libcommons-collections3-java all 3.2.2-3 [530 kB]
Get: 167 http://deb.debian.org/debian unstable/main armhf libcommons-codec-java all 1.17.1-1 [303 kB]
Get: 168 http://deb.debian.org/debian unstable/main armhf libcommons-io-java all 2.17.0-1 [488 kB]
Get: 169 http://deb.debian.org/debian unstable/main armhf libcommons-compress-java all 1.27.1-2 [641 kB]
Get: 170 http://deb.debian.org/debian unstable/main armhf libcommons-lang-java all 2.6-10 [273 kB]
Get: 171 http://deb.debian.org/debian unstable/main armhf liberror-prone-java all 2.18.0-1 [22.5 kB]
Get: 172 http://deb.debian.org/debian unstable/main armhf libjsr305-java all 0.1~+svn49-11 [26.9 kB]
Get: 173 http://deb.debian.org/debian unstable/main armhf libguava-java all 32.0.1-1 [2708 kB]
Get: 174 http://deb.debian.org/debian unstable/main armhf libhttpcore-java all 4.4.16-1 [636 kB]
Get: 175 http://deb.debian.org/debian unstable/main armhf libhttpclient-java all 4.5.14-1 [1247 kB]
Get: 176 http://deb.debian.org/debian unstable/main armhf libjarjar-java all 1.4+svn142-12 [205 kB]
Get: 177 http://deb.debian.org/debian unstable/main armhf libjcip-annotations-java all 20060626-6 [11.8 kB]
Get: 178 http://deb.debian.org/debian unstable/main armhf libjna-jni armhf 5.15.0-1 [60.7 kB]
Get: 179 http://deb.debian.org/debian unstable/main armhf libjna-java all 5.15.0-1 [238 kB]
Get: 180 http://deb.debian.org/debian unstable/main armhf libbcprov-java all 1.77-1 [5300 kB]
Get: 181 http://deb.debian.org/debian unstable/main armhf libjunixsocket-jni armhf 2.6.1-1 [16.1 kB]
Get: 182 http://deb.debian.org/debian unstable/main armhf libeclipse-jdt-annotation-java all 2.2.700+eclipse4.29-2 [25.5 kB]
Get: 183 http://deb.debian.org/debian unstable/main armhf libjunixsocket-java all 2.6.1-1 [264 kB]
Get: 184 http://deb.debian.org/debian unstable/main armhf libgoogle-gson-java all 2.10.1-1 [262 kB]
Get: 185 http://deb.debian.org/debian unstable/main armhf liblightcouch-java all 0.2.0-1 [75.0 kB]
Get: 186 http://deb.debian.org/debian unstable/main armhf libmongodb-java all 3.6.3-2 [1901 kB]
Get: 187 http://deb.debian.org/debian unstable/main armhf liblog4j2-java all 2.19.0-2 [2310 kB]
Get: 188 http://deb.debian.org/debian unstable/main armhf libjzlib-java all 1.1.3-3 [79.4 kB]
Get: 189 http://deb.debian.org/debian unstable/main armhf libjsch-java all 0.2.19-1 [513 kB]
Get: 190 http://deb.debian.org/debian unstable/main armhf libminlog-java all 1.3.1-1 [7808 B]
Get: 191 http://deb.debian.org/debian unstable/main armhf libobjenesis-java all 3.3-3 [41.3 kB]
Get: 192 http://deb.debian.org/debian unstable/main armhf libreflectasm-java all 1.11.9+dfsg-4 [25.0 kB]
Get: 193 http://deb.debian.org/debian unstable/main armhf libkryo-java all 2.20-7 [158 kB]
Get: 194 http://deb.debian.org/debian unstable/main armhf liblogback-java all 1:1.2.11-5 [701 kB]
Get: 195 http://deb.debian.org/debian unstable/main armhf libnative-platform-jni armhf 0.14-6 [10.2 kB]
Get: 196 http://deb.debian.org/debian unstable/main armhf libnative-platform-java all 0.14-6 [69.8 kB]
Get: 197 http://deb.debian.org/debian unstable/main armhf libxml-commons-external-java all 1.4.01-6 [240 kB]
Get: 198 http://deb.debian.org/debian unstable/main armhf libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB]
Get: 199 http://deb.debian.org/debian unstable/main armhf libxerces2-java all 2.12.2-1 [1440 kB]
Get: 200 http://deb.debian.org/debian unstable/main armhf libnekohtml-java all 1.9.22.noko2-0.1 [125 kB]
Get: 201 http://deb.debian.org/debian unstable/main armhf libxbean-reflect-java all 4.5-9 [132 kB]
Get: 202 http://deb.debian.org/debian unstable/main armhf libgradle-core-java all 4.4.1-20 [4293 kB]
Get: 203 http://deb.debian.org/debian unstable/main armhf libbcpg-java all 1.77-1 [428 kB]
Get: 204 http://deb.debian.org/debian unstable/main armhf libbsh-java all 2.0b4-20 [291 kB]
Get: 205 http://deb.debian.org/debian unstable/main armhf libdd-plist-java all 1.20-1.1 [72.6 kB]
Get: 206 http://deb.debian.org/debian unstable/main armhf libjaxen-java all 1.1.6-5 [214 kB]
Get: 207 http://deb.debian.org/debian unstable/main armhf libdom4j-java all 2.1.4-1 [312 kB]
Get: 208 http://deb.debian.org/debian unstable/main armhf libcommons-lang3-java all 3.17.0-1 [641 kB]
Get: 209 http://deb.debian.org/debian unstable/main armhf libbcel-java all 6.10.0-1 [674 kB]
Get: 210 http://deb.debian.org/debian unstable/main armhf libjformatstring-java all 0.10~20131207-2.1 [34.5 kB]
Get: 211 http://deb.debian.org/debian unstable/main armhf libfindbugs-java all 3.1.0~preview2-4 [3535 kB]
Get: 212 http://deb.debian.org/debian unstable/main armhf libaopalliance-java all 20070526-7 [8572 B]
Get: 213 http://deb.debian.org/debian unstable/main armhf libguice-java all 4.2.3-2 [1435 kB]
Get: 214 http://deb.debian.org/debian unstable/main armhf libjatl-java all 0.2.3-1.1 [29.0 kB]
Get: 215 http://deb.debian.org/debian unstable/main armhf libjcifs-java all 1.3.19-2 [394 kB]
Get: 216 http://deb.debian.org/debian unstable/main armhf libjavaewah-java all 1.2.3-1 [159 kB]
Get: 217 http://deb.debian.org/debian unstable/main armhf libel-api-java all 3.0.0-3 [64.9 kB]
Get: 218 http://deb.debian.org/debian unstable/main armhf libwebsocket-api-java all 1.1-2 [40.1 kB]
Get: 219 http://deb.debian.org/debian unstable/main armhf libjetty9-java all 9.4.56-1 [2964 kB]
Get: 220 http://deb.debian.org/debian unstable/main armhf libjgit-java all 6.7.0-2 [3152 kB]
Get: 221 http://deb.debian.org/debian unstable/main armhf libplexus-utils2-java all 3.4.2-1 [258 kB]
Get: 222 http://deb.debian.org/debian unstable/main armhf libwagon-provider-api-java all 3.5.3-1 [48.2 kB]
Get: 223 http://deb.debian.org/debian unstable/main armhf libmaven-resolver-java all 1.6.3-1 [548 kB]
Get: 224 http://deb.debian.org/debian unstable/main armhf libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.1 kB]
Get: 225 http://deb.debian.org/debian unstable/main armhf libmaven-parent-java all 43-2 [6252 B]
Get: 226 http://deb.debian.org/debian unstable/main armhf libmaven-resolver-1.6-java all 1.6.3-2 [558 kB]
Get: 227 http://deb.debian.org/debian unstable/main armhf libmaven-shared-utils-java all 3.4.2-1 [137 kB]
Get: 228 http://deb.debian.org/debian unstable/main armhf libplexus-cipher-java all 2.0-1 [14.9 kB]
Get: 229 http://deb.debian.org/debian unstable/main armhf libplexus-classworlds-java all 2.7.0-1 [50.6 kB]
Get: 230 http://deb.debian.org/debian unstable/main armhf libplexus-component-annotations-java all 2.1.1-1 [7660 B]
Get: 231 http://deb.debian.org/debian unstable/main armhf libplexus-interpolation-java all 1.27-1 [76.8 kB]
Get: 232 http://deb.debian.org/debian unstable/main armhf libplexus-sec-dispatcher-java all 2.0-3 [28.3 kB]
Get: 233 http://deb.debian.org/debian unstable/main armhf libgeronimo-interceptor-3.0-spec-java all 1.0.1-4 [8484 B]
Get: 234 http://deb.debian.org/debian unstable/main armhf libcdi-api-java all 1.2-4 [55.3 kB]
Get: 235 http://deb.debian.org/debian unstable/main armhf libsisu-inject-java all 0.3.4-2 [347 kB]
Get: 236 http://deb.debian.org/debian unstable/main armhf libsisu-plexus-java all 0.3.4-3 [181 kB]
Get: 237 http://deb.debian.org/debian unstable/main armhf libmaven3-core-java all 3.8.8-2 [1579 kB]
Get: 238 http://deb.debian.org/debian unstable/main armhf libplexus-container-default-java all 2.1.1-1 [193 kB]
Get: 239 http://deb.debian.org/debian unstable/main armhf libpolyglot-maven-java all 0.8~tobrien+git20120905-10 [74.9 kB]
Get: 240 http://deb.debian.org/debian unstable/main armhf librhino-java all 1.7.15-1 [1382 kB]
Get: 241 http://deb.debian.org/debian unstable/main armhf libsimple-http-java all 4.1.21-1.1 [211 kB]
Get: 242 http://deb.debian.org/debian unstable/main armhf libwagon-file-java all 3.5.3-1 [8388 B]
Get: 243 http://deb.debian.org/debian unstable/main armhf libjsoup-java all 1.15.3-1 [431 kB]
Get: 244 http://deb.debian.org/debian unstable/main armhf libwagon-http-java all 3.5.3-1 [49.5 kB]
Get: 245 http://deb.debian.org/debian unstable/main armhf libjcommander-java all 1.71-4 [73.0 kB]
Get: 246 http://deb.debian.org/debian unstable/main armhf testng all 6.9.12-4 [795 kB]
Get: 247 http://deb.debian.org/debian unstable/main armhf libgradle-plugins-java all 4.4.1-20 [5206 kB]
Get: 248 http://deb.debian.org/debian unstable/main armhf gradle all 4.4.1-20 [398 kB]
Get: 249 http://deb.debian.org/debian unstable/main armhf maven-repo-helper all 1.11 [142 kB]
Get: 250 http://deb.debian.org/debian unstable/main armhf gradle-debian-helper all 2.4 [24.5 kB]
Get: 251 http://deb.debian.org/debian unstable/main armhf jarwrapper all 0.80 [9692 B]
Get: 252 http://deb.debian.org/debian unstable/main armhf javahelper all 0.80 [80.4 kB]
Get: 253 http://deb.debian.org/debian unstable/main armhf libbyte-buddy-java all 1.14.19-1 [4756 kB]
Get: 254 http://deb.debian.org/debian unstable/main armhf libfreemarker-java all 2.3.32-2 [1546 kB]
Get: 255 http://deb.debian.org/debian unstable/main armhf libjacoco-java all 0.8.12-1 [647 kB]
Get: 256 http://deb.debian.org/debian unstable/main armhf libjoptsimple-java all 5.0.4-7 [73.7 kB]
Get: 257 http://deb.debian.org/debian unstable/main armhf libmockito-java all 3.3.0-2 [510 kB]
Fetched 255 MB in 8s (33.7 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package libpipeline1:armhf.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19686 files and directories currently installed.)
Preparing to unpack .../libpipeline1_1.5.8-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.8-1) ...
Selecting previously unselected package binfmt-support.
Preparing to unpack .../binfmt-support_2.2.2-7_armhf.deb ...
Unpacking binfmt-support (2.2.2-7) ...
Selecting previously unselected package libpython3.12-minimal:armhf.
Preparing to unpack .../libpython3.12-minimal_3.12.7-3_armhf.deb ...
Unpacking libpython3.12-minimal:armhf (3.12.7-3) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../libexpat1_2.6.4-1_armhf.deb ...
Unpacking libexpat1:armhf (2.6.4-1) ...
Selecting previously unselected package python3.12-minimal.
Preparing to unpack .../python3.12-minimal_3.12.7-3_armhf.deb ...
Unpacking python3.12-minimal (3.12.7-3) ...
Setting up libpython3.12-minimal:armhf (3.12.7-3) ...
Setting up libexpat1:armhf (2.6.4-1) ...
Setting up python3.12-minimal (3.12.7-3) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 20029 files and directories currently installed.)
Preparing to unpack .../00-python3-minimal_3.12.7-1_armhf.deb ...
Unpacking python3-minimal (3.12.7-1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../01-media-types_10.1.0_all.deb ...
Unpacking media-types (10.1.0) ...
Selecting previously unselected package netbase.
Preparing to unpack .../02-netbase_6.4_all.deb ...
Unpacking netbase (6.4) ...
Selecting previously unselected package tzdata.
Preparing to unpack .../03-tzdata_2024b-3_all.deb ...
Unpacking tzdata (2024b-3) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../04-libkrb5support0_1.21.3-3_armhf.deb ...
Unpacking libkrb5support0:armhf (1.21.3-3) ...
Selecting previously unselected package libcom-err2:armhf.
Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_armhf.deb ...
Unpacking libcom-err2:armhf (1.47.1-1+b1) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../06-libk5crypto3_1.21.3-3_armhf.deb ...
Unpacking libk5crypto3:armhf (1.21.3-3) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../07-libkeyutils1_1.6.3-4_armhf.deb ...
Unpacking libkeyutils1:armhf (1.6.3-4) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../08-libkrb5-3_1.21.3-3_armhf.deb ...
Unpacking libkrb5-3:armhf (1.21.3-3) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.21.3-3) ...
Selecting previously unselected package libtirpc-common.
Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ...
Unpacking libtirpc-common (1.3.4+ds-1.3) ...
Selecting previously unselected package libtirpc3t64:armhf.
Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_armhf.deb ...
Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
Unpacking libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ...
Selecting previously unselected package libnsl2:armhf.
Preparing to unpack .../12-libnsl2_1.3.0-3+b3_armhf.deb ...
Unpacking libnsl2:armhf (1.3.0-3+b3) ...
Selecting previously unselected package readline-common.
Preparing to unpack .../13-readline-common_8.2-5_all.deb ...
Unpacking readline-common (8.2-5) ...
Selecting previously unselected package libreadline8t64:armhf.
Preparing to unpack .../14-libreadline8t64_8.2-5_armhf.deb ...
Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Unpacking libreadline8t64:armhf (8.2-5) ...
Selecting previously unselected package libpython3.12-stdlib:armhf.
Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_armhf.deb ...
Unpacking libpython3.12-stdlib:armhf (3.12.7-3) ...
Selecting previously unselected package python3.12.
Preparing to unpack .../16-python3.12_3.12.7-3_armhf.deb ...
Unpacking python3.12 (3.12.7-3) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.12.7-1) ...
Setting up python3-minimal (3.12.7-1) ...
Selecting previously unselected package python3.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 21091 files and directories currently installed.)
Preparing to unpack .../000-python3_3.12.7-1_armhf.deb ...
Unpacking python3 (3.12.7-1) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../001-sensible-utils_0.0.24_all.deb ...
Unpacking sensible-utils (0.0.24) ...
Selecting previously unselected package openssl.
Preparing to unpack .../002-openssl_3.3.2-2_armhf.deb ...
Unpacking openssl (3.3.2-2) ...
Selecting previously unselected package ca-certificates.
Preparing to unpack .../003-ca-certificates_20240203_all.deb ...
Unpacking ca-certificates (20240203) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../004-libmagic-mgc_1%3a5.45-3+b1_armhf.deb ...
Unpacking libmagic-mgc (1:5.45-3+b1) ...
Selecting previously unselected package libmagic1t64:armhf.
Preparing to unpack .../005-libmagic1t64_1%3a5.45-3+b1_armhf.deb ...
Unpacking libmagic1t64:armhf (1:5.45-3+b1) ...
Selecting previously unselected package file.
Preparing to unpack .../006-file_1%3a5.45-3+b1_armhf.deb ...
Unpacking file (1:5.45-3+b1) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../007-gettext-base_0.22.5-2_armhf.deb ...
Unpacking gettext-base (0.22.5-2) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../008-libuchardet0_0.0.8-1+b2_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.8-1+b2) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../009-groff-base_1.23.0-5_armhf.deb ...
Unpacking groff-base (1.23.0-5) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../010-bsdextrautils_2.40.2-11_armhf.deb ...
Unpacking bsdextrautils (2.40.2-11) ...
Selecting previously unselected package man-db.
Preparing to unpack .../011-man-db_2.13.0-1_armhf.deb ...
Unpacking man-db (2.13.0-1) ...
Selecting previously unselected package ca-certificates-java.
Preparing to unpack .../012-ca-certificates-java_20240118_all.deb ...
Unpacking ca-certificates-java (20240118) ...
Selecting previously unselected package java-common.
Preparing to unpack .../013-java-common_0.76_all.deb ...
Unpacking java-common (0.76) ...
Selecting previously unselected package liblcms2-2:armhf.
Preparing to unpack .../014-liblcms2-2_2.16-2_armhf.deb ...
Unpacking liblcms2-2:armhf (2.16-2) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../015-libjpeg62-turbo_1%3a2.1.5-3+b1_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:2.1.5-3+b1) ...
Selecting previously unselected package libnspr4:armhf.
Preparing to unpack .../016-libnspr4_2%3a4.36-1_armhf.deb ...
Unpacking libnspr4:armhf (2:4.36-1) ...
Selecting previously unselected package libnss3:armhf.
Preparing to unpack .../017-libnss3_2%3a3.106-1_armhf.deb ...
Unpacking libnss3:armhf (2:3.106-1) ...
Selecting previously unselected package libpcsclite1:armhf.
Preparing to unpack .../018-libpcsclite1_2.3.0-3_armhf.deb ...
Unpacking libpcsclite1:armhf (2.3.0-3) ...
Selecting previously unselected package openjdk-21-jre-headless:armhf.
Preparing to unpack .../019-openjdk-21-jre-headless_21.0.5+11-1_armhf.deb ...
Unpacking openjdk-21-jre-headless:armhf (21.0.5+11-1) ...
Selecting previously unselected package default-jre-headless.
Preparing to unpack .../020-default-jre-headless_2%3a1.21-76_armhf.deb ...
Unpacking default-jre-headless (2:1.21-76) ...
Selecting previously unselected package ant.
Preparing to unpack .../021-ant_1.10.15-1_all.deb ...
Unpacking ant (1.10.15-1) ...
Selecting previously unselected package ant-optional.
Preparing to unpack .../022-ant-optional_1.10.15-1_all.deb ...
Unpacking ant-optional (1.10.15-1) ...
Selecting previously unselected package libantlr-java.
Preparing to unpack .../023-libantlr-java_2.7.7+dfsg-14_all.deb ...
Unpacking libantlr-java (2.7.7+dfsg-14) ...
Selecting previously unselected package antlr.
Preparing to unpack .../024-antlr_2.7.7+dfsg-14_all.deb ...
Unpacking antlr (2.7.7+dfsg-14) ...
Selecting previously unselected package m4.
Preparing to unpack .../025-m4_1.4.19-4_armhf.deb ...
Unpacking m4 (1.4.19-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../026-autoconf_2.72-3_all.deb ...
Unpacking autoconf (2.72-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../027-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../028-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../029-autopoint_0.22.5-2_all.deb ...
Unpacking autopoint (0.22.5-2) ...
Selecting previously unselected package unzip.
Preparing to unpack .../030-unzip_6.0-28_armhf.deb ...
Unpacking unzip (6.0-28) ...
Selecting previously unselected package java-wrappers.
Preparing to unpack .../031-java-wrappers_0.5_all.deb ...
Unpacking java-wrappers (0.5) ...
Selecting previously unselected package libhamcrest-java.
Preparing to unpack .../032-libhamcrest-java_2.2-2_all.deb ...
Unpacking libhamcrest-java (2.2-2) ...
Selecting previously unselected package junit4.
Preparing to unpack .../033-junit4_4.13.2-5_all.deb ...
Unpacking junit4 (4.13.2-5) ...
Selecting previously unselected package libfelix-framework-java.
Preparing to unpack .../034-libfelix-framework-java_4.6.1-2.1_all.deb ...
Unpacking libfelix-framework-java (4.6.1-2.1) ...
Selecting previously unselected package libfelix-gogo-runtime-java.
Preparing to unpack .../035-libfelix-gogo-runtime-java_0.16.2-1.1_all.deb ...
Unpacking libfelix-gogo-runtime-java (0.16.2-1.1) ...
Selecting previously unselected package libosgi-annotation-java.
Preparing to unpack .../036-libosgi-annotation-java_8.1.0-1_all.deb ...
Unpacking libosgi-annotation-java (8.1.0-1) ...
Selecting previously unselected package libosgi-core-java.
Preparing to unpack .../037-libosgi-core-java_8.0.0-2_all.deb ...
Unpacking libosgi-core-java (8.0.0-2) ...
Selecting previously unselected package libfelix-resolver-java.
Preparing to unpack .../038-libfelix-resolver-java_1.16.0-1_all.deb ...
Unpacking libfelix-resolver-java (1.16.0-1) ...
Selecting previously unselected package libhawtjni-runtime-java.
Preparing to unpack .../039-libhawtjni-runtime-java_1.18-1_all.deb ...
Unpacking libhawtjni-runtime-java (1.18-1) ...
Selecting previously unselected package libjansi-native-java.
Preparing to unpack .../040-libjansi-native-java_1.8-2_all.deb ...
Unpacking libjansi-native-java (1.8-2) ...
Selecting previously unselected package libjansi1-java.
Preparing to unpack .../041-libjansi1-java_1.18-3_all.deb ...
Unpacking libjansi1-java (1.18-3) ...
Selecting previously unselected package libjline2-java.
Preparing to unpack .../042-libjline2-java_2.14.6-5_all.deb ...
Unpacking libjline2-java (2.14.6-5) ...
Selecting previously unselected package libosgi-compendium-java.
Preparing to unpack .../043-libosgi-compendium-java_7.0.0-1_all.deb ...
Unpacking libosgi-compendium-java (7.0.0-1) ...
Selecting previously unselected package libslf4j-java.
Preparing to unpack .../044-libslf4j-java_1.7.32-1_all.deb ...
Unpacking libslf4j-java (1.7.32-1) ...
Selecting previously unselected package libxz-java.
Preparing to unpack .../045-libxz-java_1.9-1_all.deb ...
Unpacking libxz-java (1.9-1) ...
Selecting previously unselected package libyaml-snake-java.
Preparing to unpack .../046-libyaml-snake-java_1.33-2_all.deb ...
Unpacking libyaml-snake-java (1.33-2) ...
Selecting previously unselected package bnd.
Preparing to unpack .../047-bnd_5.0.1-5_all.deb ...
Unpacking bnd (5.0.1-5) ...
Selecting previously unselected package dctrl-tools.
Preparing to unpack .../048-dctrl-tools_2.24-3_armhf.deb ...
Unpacking dctrl-tools (2.24-3) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../049-libdebhelper-perl_13.20_all.deb ...
Unpacking libdebhelper-perl (13.20) ...
Selecting previously unselected package libtool.
Preparing to unpack .../050-libtool_2.4.7-8_all.deb ...
Unpacking libtool (2.4.7-8) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../051-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../052-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../053-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../054-dh-strip-nondeterminism_1.14.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.14.0-1) ...
Selecting previously unselected package libelf1t64:armhf.
Preparing to unpack .../055-libelf1t64_0.192-4_armhf.deb ...
Unpacking libelf1t64:armhf (0.192-4) ...
Selecting previously unselected package dwz.
Preparing to unpack .../056-dwz_0.15-1+b2_armhf.deb ...
Unpacking dwz (0.15-1+b2) ...
Selecting previously unselected package libicu72:armhf.
Preparing to unpack .../057-libicu72_72.1-5+b1_armhf.deb ...
Unpacking libicu72:armhf (72.1-5+b1) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../058-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_armhf.deb ...
Unpacking libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../059-gettext_0.22.5-2_armhf.deb ...
Unpacking gettext (0.22.5-2) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../060-intltool-debian_0.35.0+20060710.6_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../061-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../062-debhelper_13.20_all.deb ...
Unpacking debhelper (13.20) ...
Selecting previously unselected package libjs-jquery.
Preparing to unpack .../063-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Selecting previously unselected package libjs-jquery-ui.
Preparing to unpack .../064-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
Selecting previously unselected package libjs-jquery-ui-theme-base.
Preparing to unpack .../065-libjs-jquery-ui-theme-base_1.12.1+dfsg-1.1_all.deb ...
Unpacking libjs-jquery-ui-theme-base (1.12.1+dfsg-1.1) ...
Selecting previously unselected package openjdk-21-doc.
Preparing to unpack .../066-openjdk-21-doc_21.0.5+11-1_all.deb ...
Unpacking openjdk-21-doc (21.0.5+11-1) ...
Selecting previously unselected package default-jdk-doc.
Preparing to unpack .../067-default-jdk-doc_2%3a1.21-76_armhf.deb ...
Unpacking default-jdk-doc (2:1.21-76) ...
Selecting previously unselected package openjdk-21-jdk-headless:armhf.
Preparing to unpack .../068-openjdk-21-jdk-headless_21.0.5+11-1_armhf.deb ...
Unpacking openjdk-21-jdk-headless:armhf (21.0.5+11-1) ...
Selecting previously unselected package default-jdk-headless.
Preparing to unpack .../069-default-jdk-headless_2%3a1.21-76_armhf.deb ...
Unpacking default-jdk-headless (2:1.21-76) ...
Selecting previously unselected package libassuan9:armhf.
Preparing to unpack .../070-libassuan9_3.0.1-2_armhf.deb ...
Unpacking libassuan9:armhf (3.0.1-2) ...
Selecting previously unselected package gpgconf.
Preparing to unpack .../071-gpgconf_2.2.45-2_armhf.deb ...
Unpacking gpgconf (2.2.45-2) ...
Selecting previously unselected package libksba8:armhf.
Preparing to unpack .../072-libksba8_1.6.7-2+b1_armhf.deb ...
Unpacking libksba8:armhf (1.6.7-2+b1) ...
Selecting previously unselected package libsasl2-modules-db:armhf.
Preparing to unpack .../073-libsasl2-modules-db_2.1.28+dfsg1-8_armhf.deb ...
Unpacking libsasl2-modules-db:armhf (2.1.28+dfsg1-8) ...
Selecting previously unselected package libsasl2-2:armhf.
Preparing to unpack .../074-libsasl2-2_2.1.28+dfsg1-8_armhf.deb ...
Unpacking libsasl2-2:armhf (2.1.28+dfsg1-8) ...
Selecting previously unselected package libldap-2.5-0:armhf.
Preparing to unpack .../075-libldap-2.5-0_2.5.18+dfsg-3+b1_armhf.deb ...
Unpacking libldap-2.5-0:armhf (2.5.18+dfsg-3+b1) ...
Selecting previously unselected package libnpth0t64:armhf.
Preparing to unpack .../076-libnpth0t64_1.6-3.1+b1_armhf.deb ...
Unpacking libnpth0t64:armhf (1.6-3.1+b1) ...
Selecting previously unselected package dirmngr.
Preparing to unpack .../077-dirmngr_2.2.45-2_armhf.deb ...
Unpacking dirmngr (2.2.45-2) ...
Selecting previously unselected package gnupg-l10n.
Preparing to unpack .../078-gnupg-l10n_2.2.45-2_all.deb ...
Unpacking gnupg-l10n (2.2.45-2) ...
Selecting previously unselected package gpg.
Preparing to unpack .../079-gpg_2.2.45-2_armhf.deb ...
Unpacking gpg (2.2.45-2) ...
Selecting previously unselected package pinentry-curses.
Preparing to unpack .../080-pinentry-curses_1.2.1-4+b1_armhf.deb ...
Unpacking pinentry-curses (1.2.1-4+b1) ...
Selecting previously unselected package gpg-agent.
Preparing to unpack .../081-gpg-agent_2.2.45-2_armhf.deb ...
Unpacking gpg-agent (2.2.45-2) ...
Selecting previously unselected package gpgsm.
Preparing to unpack .../082-gpgsm_2.2.45-2_armhf.deb ...
Unpacking gpgsm (2.2.45-2) ...
Selecting previously unselected package gnupg.
Preparing to unpack .../083-gnupg_2.2.45-2_all.deb ...
Unpacking gnupg (2.2.45-2) ...
Selecting previously unselected package libfile-dirlist-perl.
Preparing to unpack .../084-libfile-dirlist-perl_0.05-3_all.deb ...
Unpacking libfile-dirlist-perl (0.05-3) ...
Selecting previously unselected package libfile-which-perl.
Preparing to unpack .../085-libfile-which-perl_1.27-2_all.deb ...
Unpacking libfile-which-perl (1.27-2) ...
Selecting previously unselected package libfile-homedir-perl.
Preparing to unpack .../086-libfile-homedir-perl_1.006-2_all.deb ...
Unpacking libfile-homedir-perl (1.006-2) ...
Selecting previously unselected package libfile-touch-perl.
Preparing to unpack .../087-libfile-touch-perl_0.12-2_all.deb ...
Unpacking libfile-touch-perl (0.12-2) ...
Selecting previously unselected package libio-pty-perl.
Preparing to unpack .../088-libio-pty-perl_1%3a1.20-1+b2_armhf.deb ...
Unpacking libio-pty-perl (1:1.20-1+b2) ...
Selecting previously unselected package libipc-run-perl.
Preparing to unpack .../089-libipc-run-perl_20231003.0-2_all.deb ...
Unpacking libipc-run-perl (20231003.0-2) ...
Selecting previously unselected package libclass-method-modifiers-perl.
Preparing to unpack .../090-libclass-method-modifiers-perl_2.15-1_all.deb ...
Unpacking libclass-method-modifiers-perl (2.15-1) ...
Selecting previously unselected package libclass-xsaccessor-perl.
Preparing to unpack .../091-libclass-xsaccessor-perl_1.19-4+b4_armhf.deb ...
Unpacking libclass-xsaccessor-perl (1.19-4+b4) ...
Selecting previously unselected package libb-hooks-op-check-perl:armhf.
Preparing to unpack .../092-libb-hooks-op-check-perl_0.22-3+b2_armhf.deb ...
Unpacking libb-hooks-op-check-perl:armhf (0.22-3+b2) ...
Selecting previously unselected package libdynaloader-functions-perl.
Preparing to unpack .../093-libdynaloader-functions-perl_0.004-1_all.deb ...
Unpacking libdynaloader-functions-perl (0.004-1) ...
Selecting previously unselected package libdevel-callchecker-perl:armhf.
Preparing to unpack .../094-libdevel-callchecker-perl_0.009-1+b1_armhf.deb ...
Unpacking libdevel-callchecker-perl:armhf (0.009-1+b1) ...
Selecting previously unselected package libparams-classify-perl:armhf.
Preparing to unpack .../095-libparams-classify-perl_0.015-2+b4_armhf.deb ...
Unpacking libparams-classify-perl:armhf (0.015-2+b4) ...
Selecting previously unselected package libmodule-runtime-perl.
Preparing to unpack .../096-libmodule-runtime-perl_0.016-2_all.deb ...
Unpacking libmodule-runtime-perl (0.016-2) ...
Selecting previously unselected package libimport-into-perl.
Preparing to unpack .../097-libimport-into-perl_1.002005-2_all.deb ...
Unpacking libimport-into-perl (1.002005-2) ...
Selecting previously unselected package librole-tiny-perl.
Preparing to unpack .../098-librole-tiny-perl_2.002004-1_all.deb ...
Unpacking librole-tiny-perl (2.002004-1) ...
Selecting previously unselected package libsub-quote-perl.
Preparing to unpack .../099-libsub-quote-perl_2.006008-1_all.deb ...
Unpacking libsub-quote-perl (2.006008-1) ...
Selecting previously unselected package libmoo-perl.
Preparing to unpack .../100-libmoo-perl_2.005005-1_all.deb ...
Unpacking libmoo-perl (2.005005-1) ...
Selecting previously unselected package libencode-locale-perl.
Preparing to unpack .../101-libencode-locale-perl_1.05-3_all.deb ...
Unpacking libencode-locale-perl (1.05-3) ...
Selecting previously unselected package libtimedate-perl.
Preparing to unpack .../102-libtimedate-perl_2.3300-2_all.deb ...
Unpacking libtimedate-perl (2.3300-2) ...
Selecting previously unselected package libhttp-date-perl.
Preparing to unpack .../103-libhttp-date-perl_6.06-1_all.deb ...
Unpacking libhttp-date-perl (6.06-1) ...
Selecting previously unselected package libfile-listing-perl.
Preparing to unpack .../104-libfile-listing-perl_6.16-1_all.deb ...
Unpacking libfile-listing-perl (6.16-1) ...
Selecting previously unselected package libhtml-tagset-perl.
Preparing to unpack .../105-libhtml-tagset-perl_3.24-1_all.deb ...
Unpacking libhtml-tagset-perl (3.24-1) ...
Selecting previously unselected package liburi-perl.
Preparing to unpack .../106-liburi-perl_5.30-1_all.deb ...
Unpacking liburi-perl (5.30-1) ...
Selecting previously unselected package libhtml-parser-perl:armhf.
Preparing to unpack .../107-libhtml-parser-perl_3.83-1+b1_armhf.deb ...
Unpacking libhtml-parser-perl:armhf (3.83-1+b1) ...
Selecting previously unselected package libhtml-tree-perl.
Preparing to unpack .../108-libhtml-tree-perl_5.07-3_all.deb ...
Unpacking libhtml-tree-perl (5.07-3) ...
Selecting previously unselected package libclone-perl:armhf.
Preparing to unpack .../109-libclone-perl_0.47-1+b1_armhf.deb ...
Unpacking libclone-perl:armhf (0.47-1+b1) ...
Selecting previously unselected package libio-html-perl.
Preparing to unpack .../110-libio-html-perl_1.004-3_all.deb ...
Unpacking libio-html-perl (1.004-3) ...
Selecting previously unselected package liblwp-mediatypes-perl.
Preparing to unpack .../111-liblwp-mediatypes-perl_6.04-2_all.deb ...
Unpacking liblwp-mediatypes-perl (6.04-2) ...
Selecting previously unselected package libhttp-message-perl.
Preparing to unpack .../112-libhttp-message-perl_7.00-2_all.deb ...
Unpacking libhttp-message-perl (7.00-2) ...
Selecting previously unselected package libhttp-cookies-perl.
Preparing to unpack .../113-libhttp-cookies-perl_6.11-1_all.deb ...
Unpacking libhttp-cookies-perl (6.11-1) ...
Selecting previously unselected package libhttp-negotiate-perl.
Preparing to unpack .../114-libhttp-negotiate-perl_6.01-2_all.deb ...
Unpacking libhttp-negotiate-perl (6.01-2) ...
Selecting previously unselected package perl-openssl-defaults:armhf.
Preparing to unpack .../115-perl-openssl-defaults_7+b2_armhf.deb ...
Unpacking perl-openssl-defaults:armhf (7+b2) ...
Selecting previously unselected package libnet-ssleay-perl:armhf.
Preparing to unpack .../116-libnet-ssleay-perl_1.94-2_armhf.deb ...
Unpacking libnet-ssleay-perl:armhf (1.94-2) ...
Selecting previously unselected package libio-socket-ssl-perl.
Preparing to unpack .../117-libio-socket-ssl-perl_2.089-1_all.deb ...
Unpacking libio-socket-ssl-perl (2.089-1) ...
Selecting previously unselected package libnet-http-perl.
Preparing to unpack .../118-libnet-http-perl_6.23-1_all.deb ...
Unpacking libnet-http-perl (6.23-1) ...
Selecting previously unselected package liblwp-protocol-https-perl.
Preparing to unpack .../119-liblwp-protocol-https-perl_6.14-1_all.deb ...
Unpacking liblwp-protocol-https-perl (6.14-1) ...
Selecting previously unselected package libtry-tiny-perl.
Preparing to unpack .../120-libtry-tiny-perl_0.32-1_all.deb ...
Unpacking libtry-tiny-perl (0.32-1) ...
Selecting previously unselected package libwww-robotrules-perl.
Preparing to unpack .../121-libwww-robotrules-perl_6.02-1_all.deb ...
Unpacking libwww-robotrules-perl (6.02-1) ...
Selecting previously unselected package libwww-perl.
Preparing to unpack .../122-libwww-perl_6.77-1_all.deb ...
Unpacking libwww-perl (6.77-1) ...
Selecting previously unselected package patchutils.
Preparing to unpack .../123-patchutils_0.4.2-1_armhf.deb ...
Unpacking patchutils (0.4.2-1) ...
Selecting previously unselected package wdiff.
Preparing to unpack .../124-wdiff_1.2.2-6_armhf.deb ...
Unpacking wdiff (1.2.2-6) ...
Selecting previously unselected package devscripts.
Preparing to unpack .../125-devscripts_2.24.3_all.deb ...
Unpacking devscripts (2.24.3) ...
Selecting previously unselected package fastjar.
Preparing to unpack .../126-fastjar_2%3a0.98-7_armhf.deb ...
Unpacking fastjar (2:0.98-7) ...
Selecting previously unselected package ivy.
Preparing to unpack .../127-ivy_2.5.2-1_all.deb ...
Unpacking ivy (2.5.2-1) ...
Selecting previously unselected package libasm-java.
Preparing to unpack .../128-libasm-java_9.7.1-1_all.deb ...
Unpacking libasm-java (9.7.1-1) ...
Selecting previously unselected package libbsf-java.
Preparing to unpack .../129-libbsf-java_1%3a2.4.0-8_all.deb ...
Unpacking libbsf-java (1:2.4.0-8) ...
Selecting previously unselected package libcommons-cli-java.
Preparing to unpack .../130-libcommons-cli-java_1.6.0-1_all.deb ...
Unpacking libcommons-cli-java (1.6.0-1) ...
Selecting previously unselected package libapache-pom-java.
Preparing to unpack .../131-libapache-pom-java_33-2_all.deb ...
Unpacking libapache-pom-java (33-2) ...
Selecting previously unselected package libcommons-parent-java.
Preparing to unpack .../132-libcommons-parent-java_56-1_all.deb ...
Unpacking libcommons-parent-java (56-1) ...
Selecting previously unselected package libcommons-logging-java.
Preparing to unpack .../133-libcommons-logging-java_1.3.0-1_all.deb ...
Unpacking libcommons-logging-java (1.3.0-1) ...
Selecting previously unselected package libjansi-java.
Preparing to unpack .../134-libjansi-java_2.4.1-2_all.deb ...
Unpacking libjansi-java (2.4.1-2) ...
Selecting previously unselected package libjsp-api-java.
Preparing to unpack .../135-libjsp-api-java_2.3.4-3_all.deb ...
Unpacking libjsp-api-java (2.3.4-3) ...
Selecting previously unselected package libqdox-java.
Preparing to unpack .../136-libqdox-java_1.12.1-4_all.deb ...
Unpacking libqdox-java (1.12.1-4) ...
Selecting previously unselected package libservlet-api-java.
Preparing to unpack .../137-libservlet-api-java_4.0.1-2_all.deb ...
Unpacking libservlet-api-java (4.0.1-2) ...
Selecting previously unselected package libxpp3-java.
Preparing to unpack .../138-libxpp3-java_1.1.4c-3_all.deb ...
Unpacking libxpp3-java (1.1.4c-3) ...
Selecting previously unselected package libxstream-java.
Preparing to unpack .../139-libxstream-java_1.4.21-1_all.deb ...
Unpacking libxstream-java (1.4.21-1) ...
Selecting previously unselected package groovy.
Preparing to unpack .../140-groovy_2.4.21-10_all.deb ...
Unpacking groovy (2.4.21-10) ...
Selecting previously unselected package libatinject-jsr330-api-java.
Preparing to unpack .../141-libatinject-jsr330-api-java_1.0+ds1-5_all.deb ...
Unpacking libatinject-jsr330-api-java (1.0+ds1-5) ...
Selecting previously unselected package libcommons-collections3-java.
Preparing to unpack .../142-libcommons-collections3-java_3.2.2-3_all.deb ...
Unpacking libcommons-collections3-java (3.2.2-3) ...
Selecting previously unselected package libcommons-codec-java.
Preparing to unpack .../143-libcommons-codec-java_1.17.1-1_all.deb ...
Unpacking libcommons-codec-java (1.17.1-1) ...
Selecting previously unselected package libcommons-io-java.
Preparing to unpack .../144-libcommons-io-java_2.17.0-1_all.deb ...
Unpacking libcommons-io-java (2.17.0-1) ...
Selecting previously unselected package libcommons-compress-java.
Preparing to unpack .../145-libcommons-compress-java_1.27.1-2_all.deb ...
Unpacking libcommons-compress-java (1.27.1-2) ...
Selecting previously unselected package libcommons-lang-java.
Preparing to unpack .../146-libcommons-lang-java_2.6-10_all.deb ...
Unpacking libcommons-lang-java (2.6-10) ...
Selecting previously unselected package liberror-prone-java.
Preparing to unpack .../147-liberror-prone-java_2.18.0-1_all.deb ...
Unpacking liberror-prone-java (2.18.0-1) ...
Selecting previously unselected package libjsr305-java.
Preparing to unpack .../148-libjsr305-java_0.1~+svn49-11_all.deb ...
Unpacking libjsr305-java (0.1~+svn49-11) ...
Selecting previously unselected package libguava-java.
Preparing to unpack .../149-libguava-java_32.0.1-1_all.deb ...
Unpacking libguava-java (32.0.1-1) ...
Selecting previously unselected package libhttpcore-java.
Preparing to unpack .../150-libhttpcore-java_4.4.16-1_all.deb ...
Unpacking libhttpcore-java (4.4.16-1) ...
Selecting previously unselected package libhttpclient-java.
Preparing to unpack .../151-libhttpclient-java_4.5.14-1_all.deb ...
Unpacking libhttpclient-java (4.5.14-1) ...
Selecting previously unselected package libjarjar-java.
Preparing to unpack .../152-libjarjar-java_1.4+svn142-12_all.deb ...
Unpacking libjarjar-java (1.4+svn142-12) ...
Selecting previously unselected package libjcip-annotations-java.
Preparing to unpack .../153-libjcip-annotations-java_20060626-6_all.deb ...
Unpacking libjcip-annotations-java (20060626-6) ...
Selecting previously unselected package libjna-jni.
Preparing to unpack .../154-libjna-jni_5.15.0-1_armhf.deb ...
Unpacking libjna-jni (5.15.0-1) ...
Selecting previously unselected package libjna-java.
Preparing to unpack .../155-libjna-java_5.15.0-1_all.deb ...
Unpacking libjna-java (5.15.0-1) ...
Selecting previously unselected package libbcprov-java.
Preparing to unpack .../156-libbcprov-java_1.77-1_all.deb ...
Unpacking libbcprov-java (1.77-1) ...
Selecting previously unselected package libjunixsocket-jni.
Preparing to unpack .../157-libjunixsocket-jni_2.6.1-1_armhf.deb ...
Unpacking libjunixsocket-jni (2.6.1-1) ...
Selecting previously unselected package libeclipse-jdt-annotation-java.
Preparing to unpack .../158-libeclipse-jdt-annotation-java_2.2.700+eclipse4.29-2_all.deb ...
Unpacking libeclipse-jdt-annotation-java (2.2.700+eclipse4.29-2) ...
Selecting previously unselected package libjunixsocket-java.
Preparing to unpack .../159-libjunixsocket-java_2.6.1-1_all.deb ...
Unpacking libjunixsocket-java (2.6.1-1) ...
Selecting previously unselected package libgoogle-gson-java.
Preparing to unpack .../160-libgoogle-gson-java_2.10.1-1_all.deb ...
Unpacking libgoogle-gson-java (2.10.1-1) ...
Selecting previously unselected package liblightcouch-java.
Preparing to unpack .../161-liblightcouch-java_0.2.0-1_all.deb ...
Unpacking liblightcouch-java (0.2.0-1) ...
Selecting previously unselected package libmongodb-java.
Preparing to unpack .../162-libmongodb-java_3.6.3-2_all.deb ...
Unpacking libmongodb-java (3.6.3-2) ...
Selecting previously unselected package liblog4j2-java.
Preparing to unpack .../163-liblog4j2-java_2.19.0-2_all.deb ...
Unpacking liblog4j2-java (2.19.0-2) ...
Selecting previously unselected package libjzlib-java.
Preparing to unpack .../164-libjzlib-java_1.1.3-3_all.deb ...
Unpacking libjzlib-java (1.1.3-3) ...
Selecting previously unselected package libjsch-java.
Preparing to unpack .../165-libjsch-java_0.2.19-1_all.deb ...
Unpacking libjsch-java (0.2.19-1) ...
Selecting previously unselected package libminlog-java.
Preparing to unpack .../166-libminlog-java_1.3.1-1_all.deb ...
Unpacking libminlog-java (1.3.1-1) ...
Selecting previously unselected package libobjenesis-java.
Preparing to unpack .../167-libobjenesis-java_3.3-3_all.deb ...
Unpacking libobjenesis-java (3.3-3) ...
Selecting previously unselected package libreflectasm-java.
Preparing to unpack .../168-libreflectasm-java_1.11.9+dfsg-4_all.deb ...
Unpacking libreflectasm-java (1.11.9+dfsg-4) ...
Selecting previously unselected package libkryo-java.
Preparing to unpack .../169-libkryo-java_2.20-7_all.deb ...
Unpacking libkryo-java (2.20-7) ...
Selecting previously unselected package liblogback-java.
Preparing to unpack .../170-liblogback-java_1%3a1.2.11-5_all.deb ...
Unpacking liblogback-java (1:1.2.11-5) ...
Selecting previously unselected package libnative-platform-jni.
Preparing to unpack .../171-libnative-platform-jni_0.14-6_armhf.deb ...
Unpacking libnative-platform-jni (0.14-6) ...
Selecting previously unselected package libnative-platform-java.
Preparing to unpack .../172-libnative-platform-java_0.14-6_all.deb ...
Unpacking libnative-platform-java (0.14-6) ...
Selecting previously unselected package libxml-commons-external-java.
Preparing to unpack .../173-libxml-commons-external-java_1.4.01-6_all.deb ...
Unpacking libxml-commons-external-java (1.4.01-6) ...
Selecting previously unselected package libxml-commons-resolver1.1-java.
Preparing to unpack .../174-libxml-commons-resolver1.1-java_1.2-11_all.deb ...
Unpacking libxml-commons-resolver1.1-java (1.2-11) ...
Selecting previously unselected package libxerces2-java.
Preparing to unpack .../175-libxerces2-java_2.12.2-1_all.deb ...
Unpacking libxerces2-java (2.12.2-1) ...
Selecting previously unselected package libnekohtml-java.
Preparing to unpack .../176-libnekohtml-java_1.9.22.noko2-0.1_all.deb ...
Unpacking libnekohtml-java (1.9.22.noko2-0.1) ...
Selecting previously unselected package libxbean-reflect-java.
Preparing to unpack .../177-libxbean-reflect-java_4.5-9_all.deb ...
Unpacking libxbean-reflect-java (4.5-9) ...
Selecting previously unselected package libgradle-core-java.
Preparing to unpack .../178-libgradle-core-java_4.4.1-20_all.deb ...
Unpacking libgradle-core-java (4.4.1-20) ...
Selecting previously unselected package libbcpg-java.
Preparing to unpack .../179-libbcpg-java_1.77-1_all.deb ...
Unpacking libbcpg-java (1.77-1) ...
Selecting previously unselected package libbsh-java.
Preparing to unpack .../180-libbsh-java_2.0b4-20_all.deb ...
Unpacking libbsh-java (2.0b4-20) ...
Selecting previously unselected package libdd-plist-java.
Preparing to unpack .../181-libdd-plist-java_1.20-1.1_all.deb ...
Unpacking libdd-plist-java (1.20-1.1) ...
Selecting previously unselected package libjaxen-java.
Preparing to unpack .../182-libjaxen-java_1.1.6-5_all.deb ...
Unpacking libjaxen-java (1.1.6-5) ...
Selecting previously unselected package libdom4j-java.
Preparing to unpack .../183-libdom4j-java_2.1.4-1_all.deb ...
Unpacking libdom4j-java (2.1.4-1) ...
Selecting previously unselected package libcommons-lang3-java.
Preparing to unpack .../184-libcommons-lang3-java_3.17.0-1_all.deb ...
Unpacking libcommons-lang3-java (3.17.0-1) ...
Selecting previously unselected package libbcel-java.
Preparing to unpack .../185-libbcel-java_6.10.0-1_all.deb ...
Unpacking libbcel-java (6.10.0-1) ...
Selecting previously unselected package libjformatstring-java.
Preparing to unpack .../186-libjformatstring-java_0.10~20131207-2.1_all.deb ...
Unpacking libjformatstring-java (0.10~20131207-2.1) ...
Selecting previously unselected package libfindbugs-java.
Preparing to unpack .../187-libfindbugs-java_3.1.0~preview2-4_all.deb ...
Unpacking libfindbugs-java (3.1.0~preview2-4) ...
Selecting previously unselected package libaopalliance-java.
Preparing to unpack .../188-libaopalliance-java_20070526-7_all.deb ...
Unpacking libaopalliance-java (20070526-7) ...
Selecting previously unselected package libguice-java.
Preparing to unpack .../189-libguice-java_4.2.3-2_all.deb ...
Unpacking libguice-java (4.2.3-2) ...
Selecting previously unselected package libjatl-java.
Preparing to unpack .../190-libjatl-java_0.2.3-1.1_all.deb ...
Unpacking libjatl-java (0.2.3-1.1) ...
Selecting previously unselected package libjcifs-java.
Preparing to unpack .../191-libjcifs-java_1.3.19-2_all.deb ...
Unpacking libjcifs-java (1.3.19-2) ...
Selecting previously unselected package libjavaewah-java.
Preparing to unpack .../192-libjavaewah-java_1.2.3-1_all.deb ...
Unpacking libjavaewah-java (1.2.3-1) ...
Selecting previously unselected package libel-api-java.
Preparing to unpack .../193-libel-api-java_3.0.0-3_all.deb ...
Unpacking libel-api-java (3.0.0-3) ...
Selecting previously unselected package libwebsocket-api-java.
Preparing to unpack .../194-libwebsocket-api-java_1.1-2_all.deb ...
Unpacking libwebsocket-api-java (1.1-2) ...
Selecting previously unselected package libjetty9-java.
Preparing to unpack .../195-libjetty9-java_9.4.56-1_all.deb ...
Unpacking libjetty9-java (9.4.56-1) ...
Selecting previously unselected package libjgit-java.
Preparing to unpack .../196-libjgit-java_6.7.0-2_all.deb ...
Unpacking libjgit-java (6.7.0-2) ...
Selecting previously unselected package libplexus-utils2-java.
Preparing to unpack .../197-libplexus-utils2-java_3.4.2-1_all.deb ...
Unpacking libplexus-utils2-java (3.4.2-1) ...
Selecting previously unselected package libwagon-provider-api-java.
Preparing to unpack .../198-libwagon-provider-api-java_3.5.3-1_all.deb ...
Unpacking libwagon-provider-api-java (3.5.3-1) ...
Selecting previously unselected package libmaven-resolver-java.
Preparing to unpack .../199-libmaven-resolver-java_1.6.3-1_all.deb ...
Unpacking libmaven-resolver-java (1.6.3-1) ...
Selecting previously unselected package libgeronimo-annotation-1.3-spec-java.
Preparing to unpack .../200-libgeronimo-annotation-1.3-spec-java_1.3-1_all.deb ...
Unpacking libgeronimo-annotation-1.3-spec-java (1.3-1) ...
Selecting previously unselected package libmaven-parent-java.
Preparing to unpack .../201-libmaven-parent-java_43-2_all.deb ...
Unpacking libmaven-parent-java (43-2) ...
Selecting previously unselected package libmaven-resolver-1.6-java.
Preparing to unpack .../202-libmaven-resolver-1.6-java_1.6.3-2_all.deb ...
Unpacking libmaven-resolver-1.6-java (1.6.3-2) ...
Selecting previously unselected package libmaven-shared-utils-java.
Preparing to unpack .../203-libmaven-shared-utils-java_3.4.2-1_all.deb ...
Unpacking libmaven-shared-utils-java (3.4.2-1) ...
Selecting previously unselected package libplexus-cipher-java.
Preparing to unpack .../204-libplexus-cipher-java_2.0-1_all.deb ...
Unpacking libplexus-cipher-java (2.0-1) ...
Selecting previously unselected package libplexus-classworlds-java.
Preparing to unpack .../205-libplexus-classworlds-java_2.7.0-1_all.deb ...
Unpacking libplexus-classworlds-java (2.7.0-1) ...
Selecting previously unselected package libplexus-component-annotations-java.
Preparing to unpack .../206-libplexus-component-annotations-java_2.1.1-1_all.deb ...
Unpacking libplexus-component-annotations-java (2.1.1-1) ...
Selecting previously unselected package libplexus-interpolation-java.
Preparing to unpack .../207-libplexus-interpolation-java_1.27-1_all.deb ...
Unpacking libplexus-interpolation-java (1.27-1) ...
Selecting previously unselected package libplexus-sec-dispatcher-java.
Preparing to unpack .../208-libplexus-sec-dispatcher-java_2.0-3_all.deb ...
Unpacking libplexus-sec-dispatcher-java (2.0-3) ...
Selecting previously unselected package libgeronimo-interceptor-3.0-spec-java.
Preparing to unpack .../209-libgeronimo-interceptor-3.0-spec-java_1.0.1-4_all.deb ...
Unpacking libgeronimo-interceptor-3.0-spec-java (1.0.1-4) ...
Selecting previously unselected package libcdi-api-java.
Preparing to unpack .../210-libcdi-api-java_1.2-4_all.deb ...
Unpacking libcdi-api-java (1.2-4) ...
Selecting previously unselected package libsisu-inject-java.
Preparing to unpack .../211-libsisu-inject-java_0.3.4-2_all.deb ...
Unpacking libsisu-inject-java (0.3.4-2) ...
Selecting previously unselected package libsisu-plexus-java.
Preparing to unpack .../212-libsisu-plexus-java_0.3.4-3_all.deb ...
Unpacking libsisu-plexus-java (0.3.4-3) ...
Selecting previously unselected package libmaven3-core-java.
Preparing to unpack .../213-libmaven3-core-java_3.8.8-2_all.deb ...
Unpacking libmaven3-core-java (3.8.8-2) ...
Selecting previously unselected package libplexus-container-default-java.
Preparing to unpack .../214-libplexus-container-default-java_2.1.1-1_all.deb ...
Unpacking libplexus-container-default-java (2.1.1-1) ...
Selecting previously unselected package libpolyglot-maven-java.
Preparing to unpack .../215-libpolyglot-maven-java_0.8~tobrien+git20120905-10_all.deb ...
Unpacking libpolyglot-maven-java (0.8~tobrien+git20120905-10) ...
Selecting previously unselected package librhino-java.
Preparing to unpack .../216-librhino-java_1.7.15-1_all.deb ...
Unpacking librhino-java (1.7.15-1) ...
Selecting previously unselected package libsimple-http-java.
Preparing to unpack .../217-libsimple-http-java_4.1.21-1.1_all.deb ...
Unpacking libsimple-http-java (4.1.21-1.1) ...
Selecting previously unselected package libwagon-file-java.
Preparing to unpack .../218-libwagon-file-java_3.5.3-1_all.deb ...
Unpacking libwagon-file-java (3.5.3-1) ...
Selecting previously unselected package libjsoup-java.
Preparing to unpack .../219-libjsoup-java_1.15.3-1_all.deb ...
Unpacking libjsoup-java (1.15.3-1) ...
Selecting previously unselected package libwagon-http-java.
Preparing to unpack .../220-libwagon-http-java_3.5.3-1_all.deb ...
Unpacking libwagon-http-java (3.5.3-1) ...
Selecting previously unselected package libjcommander-java.
Preparing to unpack .../221-libjcommander-java_1.71-4_all.deb ...
Unpacking libjcommander-java (1.71-4) ...
Selecting previously unselected package testng.
Preparing to unpack .../222-testng_6.9.12-4_all.deb ...
Unpacking testng (6.9.12-4) ...
Selecting previously unselected package libgradle-plugins-java.
Preparing to unpack .../223-libgradle-plugins-java_4.4.1-20_all.deb ...
Unpacking libgradle-plugins-java (4.4.1-20) ...
Selecting previously unselected package gradle.
Preparing to unpack .../224-gradle_4.4.1-20_all.deb ...
Unpacking gradle (4.4.1-20) ...
Selecting previously unselected package maven-repo-helper.
Preparing to unpack .../225-maven-repo-helper_1.11_all.deb ...
Unpacking maven-repo-helper (1.11) ...
Selecting previously unselected package gradle-debian-helper.
Preparing to unpack .../226-gradle-debian-helper_2.4_all.deb ...
Unpacking gradle-debian-helper (2.4) ...
Selecting previously unselected package jarwrapper.
Preparing to unpack .../227-jarwrapper_0.80_all.deb ...
Unpacking jarwrapper (0.80) ...
Selecting previously unselected package javahelper.
Preparing to unpack .../228-javahelper_0.80_all.deb ...
Unpacking javahelper (0.80) ...
Selecting previously unselected package libbyte-buddy-java.
Preparing to unpack .../229-libbyte-buddy-java_1.14.19-1_all.deb ...
Unpacking libbyte-buddy-java (1.14.19-1) ...
Selecting previously unselected package libfreemarker-java.
Preparing to unpack .../230-libfreemarker-java_2.3.32-2_all.deb ...
Unpacking libfreemarker-java (2.3.32-2) ...
Selecting previously unselected package libjacoco-java.
Preparing to unpack .../231-libjacoco-java_0.8.12-1_all.deb ...
Unpacking libjacoco-java (0.8.12-1) ...
Selecting previously unselected package libjoptsimple-java.
Preparing to unpack .../232-libjoptsimple-java_5.0.4-7_all.deb ...
Unpacking libjoptsimple-java (5.0.4-7) ...
Selecting previously unselected package libmockito-java.
Preparing to unpack .../233-libmockito-java_3.3.0-2_all.deb ...
Unpacking libmockito-java (3.3.0-2) ...
Setting up libjcifs-java (1.3.19-2) ...
Setting up libbcprov-java (1.77-1) ...
Setting up libksba8:armhf (1.6.7-2+b1) ...
Setting up media-types (10.1.0) ...
Setting up libpipeline1:armhf (1.5.8-1) ...
Setting up fastjar (2:0.98-7) ...
Setting up liblcms2-2:armhf (2.16-2) ...
Setting up libjcommander-java (1.71-4) ...
Setting up wdiff (1.2.2-6) ...
Setting up libslf4j-java (1.7.32-1) ...
Setting up libfile-which-perl (1.27-2) ...
Setting up libplexus-utils2-java (3.4.2-1) ...
Setting up libnpth0t64:armhf (1.6-3.1+b1) ...
Setting up libkeyutils1:armhf (1.6.3-4) ...
Setting up libplexus-classworlds-java (2.7.0-1) ...
Setting up libqdox-java (1.12.1-4) ...
Setting up libicu72:armhf (72.1-5+b1) ...
Setting up libjsr305-java (0.1~+svn49-11) ...
Setting up libsimple-http-java (4.1.21-1.1) ...
Setting up bsdextrautils (2.40.2-11) ...
Setting up java-common (0.76) ...
Setting up libdynaloader-functions-perl (0.004-1) ...
Setting up libjcip-annotations-java (20060626-6) ...
Setting up libobjenesis-java (3.3-3) ...
Setting up libclass-method-modifiers-perl (2.15-1) ...
Setting up libaopalliance-java (20070526-7) ...
Setting up libcommons-cli-java (1.6.0-1) ...
Setting up libio-pty-perl (1:1.20-1+b2) ...
Setting up libmagic-mgc (1:5.45-3+b1) ...
Setting up liblogback-java (1:1.2.11-5) ...
Setting up libclone-perl:armhf (0.47-1+b1) ...
Setting up libminlog-java (1.3.1-1) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libgoogle-gson-java (2.10.1-1) ...
Setting up libtirpc-common (1.3.4+ds-1.3) ...
Setting up libhtml-tagset-perl (3.24-1) ...
Setting up unzip (6.0-28) ...
Setting up libdebhelper-perl (13.20) ...
Setting up liblwp-mediatypes-perl (6.04-2) ...
Setting up libmagic1t64:armhf (1:5.45-3+b1) ...
Setting up libasm-java (9.7.1-1) ...
Setting up libjs-jquery-ui-theme-base (1.12.1+dfsg-1.1) ...
Setting up libtry-tiny-perl (0.32-1) ...
Setting up perl-openssl-defaults:armhf (7+b2) ...
Setting up libdd-plist-java (1.20-1.1) ...
Setting up gettext-base (0.22.5-2) ...
Setting up m4 (1.4.19-4) ...
Setting up libel-api-java (3.0.0-3) ...
Setting up libencode-locale-perl (1.05-3) ...
Setting up libplexus-component-annotations-java (2.1.1-1) ...
Setting up libcom-err2:armhf (1.47.1-1+b1) ...
Setting up file (1:5.45-3+b1) ...
Setting up libpolyglot-maven-java (0.8~tobrien+git20120905-10) ...
Setting up libfelix-gogo-runtime-java (0.16.2-1.1) ...
Setting up libjzlib-java (1.1.3-3) ...
Setting up libelf1t64:armhf (0.192-4) ...
Setting up libkrb5support0:armhf (1.21.3-3) ...
Setting up libsasl2-modules-db:armhf (2.1.28+dfsg1-8) ...
Setting up tzdata (2024b-3) ...

Current default time zone: 'Etc/UTC'
Local time is now:      Sat Nov 23 14:12:52 UTC 2024.
Universal Time is now:  Sat Nov 23 14:12:52 UTC 2024.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ...
Setting up libgeronimo-interceptor-3.0-spec-java (1.0.1-4) ...
Setting up libcommons-collections3-java (3.2.2-3) ...
Setting up libreflectasm-java (1.11.9+dfsg-4) ...
Setting up librhino-java (1.7.15-1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libbsf-java (1:2.4.0-8) ...
Setting up libosgi-annotation-java (8.1.0-1) ...
Setting up libjformatstring-java (0.10~20131207-2.1) ...
Setting up libjavaewah-java (1.2.3-1) ...
Setting up libjpeg62-turbo:armhf (1:2.1.5-3+b1) ...
Setting up libjaxen-java (1.1.6-5) ...
Setting up libnspr4:armhf (2:4.36-1) ...
Setting up gnupg-l10n (2.2.45-2) ...
Setting up libeclipse-jdt-annotation-java (2.2.700+eclipse4.29-2) ...
Setting up libjansi-java (2.4.1-2) ...
Setting up libapache-pom-java (33-2) ...
Setting up libxpp3-java (1.1.4c-3) ...
Setting up libatinject-jsr330-api-java (1.0+ds1-5) ...
Setting up libwebsocket-api-java (1.1-2) ...
Setting up libplexus-interpolation-java (1.27-1) ...
Setting up libxml-commons-resolver1.1-java (1.2-11) ...
Setting up libkryo-java (2.20-7) ...
Setting up libxz-java (1.9-1) ...
Setting up libio-html-perl (1.004-3) ...
Setting up libjna-jni (5.15.0-1) ...
Setting up autopoint (0.22.5-2) ...
Setting up binfmt-support (2.2.2-7) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libb-hooks-op-check-perl:armhf (0.22-3+b2) ...
Setting up libjunixsocket-jni (2.6.1-1) ...
Setting up libfelix-framework-java (4.6.1-2.1) ...
Setting up libipc-run-perl (20231003.0-2) ...
Setting up libpcsclite1:armhf (2.3.0-3) ...
Setting up libmongodb-java (3.6.3-2) ...
Setting up libk5crypto3:armhf (1.21.3-3) ...
Setting up libhamcrest-java (2.2-2) ...
Setting up libbsh-java (2.0b4-20) ...
Setting up libjsp-api-java (2.3.4-3) ...
Setting up libsasl2-2:armhf (2.1.28+dfsg1-8) ...
Setting up autoconf (2.72-3) ...
Setting up libtimedate-perl (2.3300-2) ...
Setting up libjarjar-java (1.4+svn142-12) ...
Setting up dwz (0.15-1+b2) ...
Setting up libfreemarker-java (2.3.32-2) ...
Setting up sensible-utils (0.0.24) ...
Setting up libjacoco-java (0.8.12-1) ...
Setting up libjsoup-java (1.15.3-1) ...
Setting up libuchardet0:armhf (0.0.8-1+b2) ...
Setting up libassuan9:armhf (3.0.1-2) ...
Setting up libxml-commons-external-java (1.4.01-6) ...
Setting up libjna-java (5.15.0-1) ...
Setting up libxbean-reflect-java (4.5-9) ...
Setting up libservlet-api-java (4.0.1-2) ...
Setting up librole-tiny-perl (2.002004-1) ...
Setting up netbase (6.4) ...
Setting up libsub-quote-perl (2.006008-1) ...
Setting up libnative-platform-jni (0.14-6) ...
Setting up libclass-xsaccessor-perl (1.19-4+b4) ...
Setting up libkrb5-3:armhf (1.21.3-3) ...
Setting up libhttpcore-java (4.4.16-1) ...
Setting up libjoptsimple-java (5.0.4-7) ...
Setting up libbcpg-java (1.77-1) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up libxerces2-java (2.12.2-1) ...
Setting up libfile-dirlist-perl (0.05-3) ...
Setting up libfile-homedir-perl (1.006-2) ...
Setting up libantlr-java (2.7.7+dfsg-14) ...
Setting up libyaml-snake-java (1.33-2) ...
Setting up openssl (3.3.2-2) ...
Setting up libcdi-api-java (1.2-4) ...
Setting up readline-common (8.2-5) ...
Setting up libhawtjni-runtime-java (1.18-1) ...
Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up liburi-perl (5.30-1) ...
Setting up libfile-touch-perl (0.12-2) ...
Setting up dctrl-tools (2.24-3) ...
Setting up libjatl-java (0.2.3-1.1) ...
Setting up libnet-ssleay-perl:armhf (1.94-2) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up pinentry-curses (1.2.1-4+b1) ...
Setting up libdom4j-java (2.1.4-1) ...
Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
Setting up libwagon-provider-api-java (3.5.3-1) ...
Setting up libnative-platform-java (0.14-6) ...
Setting up libosgi-core-java (8.0.0-2) ...
Setting up libhttp-date-perl (6.06-1) ...
Setting up libxstream-java (1.4.21-1) ...
Setting up libnekohtml-java (1.9.22.noko2-0.1) ...
Setting up gettext (0.22.5-2) ...
Setting up libjetty9-java (9.4.56-1) ...
Setting up java-wrappers (0.5) ...
Setting up libfile-listing-perl (6.16-1) ...
Setting up libosgi-compendium-java (7.0.0-1) ...
Setting up jarwrapper (0.80) ...
Setting up libtool (2.4.7-8) ...
Setting up libmaven-parent-java (43-2) ...
Setting up libcommons-parent-java (56-1) ...
Setting up libcommons-logging-java (1.3.0-1) ...
Setting up libnet-http-perl (6.23-1) ...
Setting up libsisu-inject-java (0.3.4-2) ...
Setting up libnss3:armhf (2:3.106-1) ...
Setting up libdevel-callchecker-perl:armhf (0.009-1+b1) ...
Setting up libcommons-lang-java (2.6-10) ...
Setting up libjunixsocket-java (2.6.1-1) ...
Setting up libldap-2.5-0:armhf (2.5.18+dfsg-3+b1) ...
Setting up libplexus-cipher-java (2.0-1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up patchutils (0.4.2-1) ...
Setting up ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
146 added, 0 removed; done.
Setting up libsisu-plexus-java (0.3.4-3) ...
Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
Setting up testng (6.9.12-4) ...
Setting up libgssapi-krb5-2:armhf (1.21.3-3) ...
Setting up libcommons-lang3-java (3.17.0-1) ...
Setting up libreadline8t64:armhf (8.2-5) ...
Setting up dh-strip-nondeterminism (1.14.0-1) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libfelix-resolver-java (1.16.0-1) ...
Setting up libjansi-native-java (1.8-2) ...
Setting up groff-base (1.23.0-5) ...
Setting up libhtml-parser-perl:armhf (3.83-1+b1) ...
Setting up gpgconf (2.2.45-2) ...
Setting up libjansi1-java (1.18-3) ...
Setting up libplexus-sec-dispatcher-java (2.0-3) ...
Setting up ca-certificates-java (20240118) ...
No JRE found. Skipping Java certificates setup.
Setting up libwagon-file-java (3.5.3-1) ...
Setting up libcommons-codec-java (1.17.1-1) ...
Setting up libjline2-java (2.14.6-5) ...
Setting up libio-socket-ssl-perl (2.089-1) ...
Setting up gpg (2.2.45-2) ...
Setting up libhttp-message-perl (7.00-2) ...
Setting up libhttp-negotiate-perl (6.01-2) ...
Setting up gpg-agent (2.2.45-2) ...
Setting up openjdk-21-jre-headless:armhf (21.0.5+11-1) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ...
Setting up libhttp-cookies-perl (6.11-1) ...
Setting up libcommons-io-java (2.17.0-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libhtml-tree-perl (5.07-3) ...
Setting up libparams-classify-perl:armhf (0.015-2+b4) ...
Setting up gpgsm (2.2.45-2) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libmaven-resolver-1.6-java (1.6.3-2) ...
Setting up dirmngr (2.2.45-2) ...
Setting up openjdk-21-doc (21.0.5+11-1) ...
Setting up libmaven-resolver-java (1.6.3-1) ...
Setting up libbcel-java (6.10.0-1) ...
Setting up libmodule-runtime-perl (0.016-2) ...
Setting up libhttpclient-java (4.5.14-1) ...
Setting up libnsl2:armhf (1.3.0-3+b3) ...
Setting up gnupg (2.2.45-2) ...
Setting up liblightcouch-java (0.2.0-1) ...
Setting up libwagon-http-java (3.5.3-1) ...
Setting up libmaven-shared-utils-java (3.4.2-1) ...
Setting up libfindbugs-java (3.1.0~preview2-4) ...
Setting up libpython3.12-stdlib:armhf (3.12.7-3) ...
Setting up libcommons-compress-java (1.27.1-2) ...
Setting up libimport-into-perl (1.002005-2) ...
Setting up libmoo-perl (2.005005-1) ...
Setting up liblog4j2-java (2.19.0-2) ...
Setting up python3.12 (3.12.7-3) ...
Setting up debhelper (13.20) ...
Setting up default-jdk-doc (2:1.21-76) ...
Setting up libjsch-java (0.2.19-1) ...
Setting up libpython3-stdlib:armhf (3.12.7-1) ...
Setting up libjgit-java (6.7.0-2) ...
Setting up python3 (3.12.7-1) ...
Setting up liblwp-protocol-https-perl (6.14-1) ...
Setting up liberror-prone-java (2.18.0-1) ...
Setting up libwww-perl (6.77-1) ...
Setting up devscripts (2.24.3) ...
Setting up libguava-java (32.0.1-1) ...
Setting up javahelper (0.80) ...
Setting up libplexus-container-default-java (2.1.1-1) ...
Setting up libguice-java (4.2.3-2) ...
Setting up libmaven3-core-java (3.8.8-2) ...
Setting up libbyte-buddy-java (1.14.19-1) ...
Setting up libmockito-java (3.3.0-2) ...
Processing triggers for libc-bin (2.40-3) ...
Processing triggers for ca-certificates-java (20240118) ...
Adding debian:ACCVRAIZ1.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
Adding debian:ANF_Secure_Server_Root_CA.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem
Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:BJCA_Global_Root_CA1.pem
Adding debian:BJCA_Global_Root_CA2.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Certainly_Root_E1.pem
Adding debian:Certainly_Root_R1.pem
Adding debian:Certigna.pem
Adding debian:Certigna_Root_CA.pem
Adding debian:Certum_EC-384_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Certum_Trusted_Root_CA.pem
Adding debian:CommScope_Public_Trust_ECC_Root-01.pem
Adding debian:CommScope_Public_Trust_ECC_Root-02.pem
Adding debian:CommScope_Public_Trust_RSA_Root-01.pem
Adding debian:CommScope_Public_Trust_RSA_Root-02.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:D-TRUST_BR_Root_CA_1_2020.pem
Adding debian:D-TRUST_EV_Root_CA_1_2020.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem
Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GLOBALTRUST_2020.pem
Adding debian:GTS_Root_R1.pem
Adding debian:GTS_Root_R2.pem
Adding debian:GTS_Root_R3.pem
Adding debian:GTS_Root_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:GlobalSign_Root_E46.pem
Adding debian:GlobalSign_Root_R46.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem
Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:HiPKI_Root_CA_-_G1.pem
Adding debian:Hongkong_Post_Root_CA_3.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:ISRG_Root_X2.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
Adding debian:NAVER_Global_Root_Certification_Authority.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem
Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem
Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_ECC_RootCA1.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_RootCA3.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Telia_Root_CA_v2.pem
Adding debian:TrustAsia_Global_Root_CA_G3.pem
Adding debian:TrustAsia_Global_Root_CA_G4.pem
Adding debian:Trustwave_Global_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
Adding debian:TunTrust_Root_CA.pem
Adding debian:UCA_Extended_Validation_Root.pem
Adding debian:UCA_Global_G2_Root.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:certSIGN_Root_CA_G2.pem
Adding debian:e-Szigno_Root_CA_2017.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:emSign_ECC_Root_CA_-_C3.pem
Adding debian:emSign_ECC_Root_CA_-_G3.pem
Adding debian:emSign_Root_CA_-_C1.pem
Adding debian:emSign_Root_CA_-_G1.pem
Adding debian:vTrus_ECC_Root_CA.pem
Adding debian:vTrus_Root_CA.pem
done.
Setting up antlr (2.7.7+dfsg-14) ...
Setting up ivy (2.5.2-1) ...
Setting up ant (1.10.15-1) ...
Setting up junit4 (4.13.2-5) ...
Setting up groovy (2.4.21-10) ...
update-alternatives: using /usr/share/groovy/bin/groovy to provide /usr/bin/groovy (groovy) in auto mode
update-alternatives: using /usr/share/groovy/bin/groovyc to provide /usr/bin/groovyc (groovyc) in auto mode
update-alternatives: using /usr/share/groovy/bin/grape to provide /usr/bin/grape (grape) in auto mode
update-alternatives: using /usr/share/groovy/bin/startGroovy to provide /usr/bin/startGroovy (startGroovy) in auto mode
update-alternatives: using /usr/share/groovy/bin/groovysh to provide /usr/bin/groovysh (groovysh) in auto mode
update-alternatives: using /usr/share/groovy/bin/java2groovy to provide /usr/bin/java2groovy (java2groovy) in auto mode
update-alternatives: using /usr/share/groovy/bin/groovyConsole to provide /usr/bin/groovyConsole (groovyConsole) in auto mode
update-alternatives: using /usr/share/groovy/bin/groovydoc to provide /usr/bin/groovydoc (groovydoc) in auto mode
Setting up openjdk-21-jdk-headless:armhf (21.0.5+11-1) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up default-jre-headless (2:1.21-76) ...
Setting up maven-repo-helper (1.11) ...
Setting up ant-optional (1.10.15-1) ...
Setting up bnd (5.0.1-5) ...
Setting up default-jdk-headless (2:1.21-76) ...
Setting up libgradle-core-java (4.4.1-20) ...
Setting up libgradle-plugins-java (4.4.1-20) ...
Setting up gradle (4.4.1-20) ...
Setting up gradle-debian-helper (2.4) ...
Processing triggers for ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for ca-certificates-java (20240118) ...
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
I: Building the package
I: user script /srv/workspace/pbuilder/25729/tmp/hooks/A99_set_merged_usr starting
Not re-configuring usrmerge for unstable
I: user script /srv/workspace/pbuilder/25729/tmp/hooks/A99_set_merged_usr finished
hostname: Name or service not known
I: Running cd /build/reproducible-path/barclay-5.0.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../barclay_5.0.0+dfsg-1_source.changes
dpkg-buildpackage: info: source package barclay
dpkg-buildpackage: info: source version 5.0.0+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Pierre Gruet <pgt@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh  clean --buildsystem=gradle --with javahelper,jh_maven_repo_helper
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/barclay-5.0.0+dfsg'
dh_auto_clean
	sh -c "find . -wholename .*build/tmp | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf"
	sh -c "find . -wholename .*build/debian | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf"
	rm -Rf /build/reproducible-path/barclay-5.0.0\+dfsg/.gradle /build/reproducible-path/barclay-5.0.0\+dfsg/buildSrc/.gradle .m2
rm debian/pom-barclay.xml
rm: cannot remove 'debian/pom-barclay.xml': No such file or directory
make[1]: [debian/rules:13: override_dh_auto_clean] Error 1 (ignored)
make[1]: Leaving directory '/build/reproducible-path/barclay-5.0.0+dfsg'
   dh_autoreconf_clean -O--buildsystem=gradle
   jh_clean -O--buildsystem=gradle
	rm -fr debian/_jh_manifest* debian/_jh_build*
Duplicate specification "unlink|u" for option "u"
Duplicate specification "u=s" for option "u"
	rm -fr debian/.eclipse-build
	rm -f debian/orbitdeps.debhelper
   debian/rules override_dh_clean
make[1]: Entering directory '/build/reproducible-path/barclay-5.0.0+dfsg'
dh_clean
	rm -f debian/debhelper-build-stamp
	rm -rf debian/.debhelper/
	rm -f -- debian/libbarclay-java.substvars debian/files
	rm -fr -- debian/libbarclay-java/ debian/tmp/
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \)
rm -f debian/bd-temp-substvars
rm -f debian/bd.substvars
make[1]: Leaving directory '/build/reproducible-path/barclay-5.0.0+dfsg'
 debian/rules binary
dh  binary --buildsystem=gradle --with javahelper,jh_maven_repo_helper
   dh_update_autotools_config -O--buildsystem=gradle
   dh_autoreconf -O--buildsystem=gradle
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/reproducible-path/barclay-5.0.0+dfsg'
# As we provide a Debian-made POM file, we have to update the version number
# that is inside each time the upstream version changes. This is done
# automatically with this tiny hack.
sed 's/@VERSION@/5.0.0+dfsg/ ; s/\+dfsg[[:digit:]]*//' debian/pom-barclay.xml.in > debian/pom-barclay.xml
dh_auto_configure
make[1]: Leaving directory '/build/reproducible-path/barclay-5.0.0+dfsg'
   jh_linkjars -O--buildsystem=gradle
Duplicate specification "u=s" for option "u"
Duplicate specification "unlink|u" for option "u"
	rm -f debian/libbarclay-java.debhelper.log
   debian/rules override_dh_auto_build
make[1]: Entering directory '/build/reproducible-path/barclay-5.0.0+dfsg'
dh_auto_build -- jar
	mkdir -p .gradle/init.d
	cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/
	gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=barclay -Dfile.encoding=UTF-8 --parallel --max-workers=4 jar
openjdk version "21.0.5" 2024-10-15
OpenJDK Runtime Environment (build 21.0.5+11-Debian-1)
OpenJDK Server VM (build 21.0.5+11-Debian-1, mixed mode, sharing)
Initialized native services in: /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/native
To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html.
Starting process 'Gradle build daemon'. Working directory: /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-21-openjdk-armhf/bin/java --add-opens java.base/java.lang=ALL-UNNAMED -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1
Successfully started process 'Gradle build daemon'
An attempt to start the daemon took 3.08 secs.
The client will now receive all logging from the daemon (pid: 32602). The daemon log file: /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/daemon/4.4.1/daemon-32602.out.log
Daemon will be stopped at the end of the build stopping after processing
Closing daemon's stdin at end of input.
The daemon will no longer process any standard input.
Using 4 worker leases.
Creating new cache for fileHashes, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@6cc44c
Creating new cache for resourceHashesCache, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@6cc44c
Creating new cache for fileHashes, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@1bef22
Starting Build
Compiling initialization script '/build/reproducible-path/barclay-5.0.0+dfsg/.gradle/init.d/init.gradle' using SubsetScriptTransformer.
Creating new cache for metadata-1.1/results, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@1fa2fe
Compiling initialization script '/build/reproducible-path/barclay-5.0.0+dfsg/.gradle/init.d/init.gradle' using BuildScriptTransformer.
Settings evaluated using settings file '/build/reproducible-path/barclay-5.0.0+dfsg/settings.gradle'.
	Settings file not found (/build/reproducible-path/barclay-5.0.0+dfsg/settings.gradle)
	Root project name not defined in settings.gradle, defaulting to 'barclay' instead of the name of the root directory 'barclay-5.0.0+dfsg'
Projects loaded. Root project using build file '/build/reproducible-path/barclay-5.0.0+dfsg/build.gradle'.
Included projects: [root project 'barclay']
	Keep-alive timer started
	Adding Debian repository to project 'barclay'
Parallel execution is an incubating feature.
Evaluating root project 'barclay' using build file '/build/reproducible-path/barclay-5.0.0+dfsg/build.gradle'.
Compiling build file '/build/reproducible-path/barclay-5.0.0+dfsg/build.gradle' using SubsetScriptTransformer.
Compiling build file '/build/reproducible-path/barclay-5.0.0+dfsg/build.gradle' using BuildScriptTransformer.
Starting process 'command 'dpkg-parsechangelog''. Working directory: /build/reproducible-path/barclay-5.0.0+dfsg Command: dpkg-parsechangelog -S Version
Successfully started process 'command 'dpkg-parsechangelog''
	Adding Maven pom generation to project 'barclay'
	Linking the generated javadoc to the system JDK API documentation
All projects evaluated.
Selected primary task 'jar' from project :
Creating new cache for annotation-processors, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@e5295
Tasks to be executed: [task ':compileJava', task ':processResources', task ':classes', task ':debianMavenPom', task ':jar']
Creating new cache for resourceHashesCache, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@1bef22
Creating new cache for taskHistory, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@471999
Creating new cache for outputFiles, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@3b4c4f
:compileJava (Thread[#46,Task worker for ':',5,main]) started.
:compileJava
Putting task artifact state for task ':compileJava' into context took 0.017 secs.
Creating new cache for metadata-2.36/module-metadata, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@1681c96
	Loading the Maven rules...
	Replacing net.sf.jopt-simple:jopt-simple:jar:5.0.3  ->  net.sf.jopt-simple:jopt-simple:jar:debian
	Replacing org.apache.commons:commons-lang3:jar:3.4  ->  org.apache.commons:commons-lang3:jar:debian
	Passing through org.apache.commons:commons-parent:jar:debian
	Passing through org.apache:apache:jar:debian
	Replacing org.apache.logging.log4j:log4j-api:jar:2.17.1  ->  org.apache.logging.log4j:log4j-api:jar:debian
	Passing through org.apache.logging.log4j:log4j:jar:debian
	Passing through org.apache.logging.log4j:log4j-bom:jar:debian
	Replacing org.apache.logging.log4j:log4j-core:jar:2.15.0  ->  org.apache.logging.log4j:log4j-core:jar:debian
	Replacing org.freemarker:freemarker:jar:2.3.30  ->  org.freemarker:freemarker:jar:debian
	Replacing com.google.code.gson:gson:jar:2.2.2  ->  com.google.code.gson:gson:jar:debian
	Passing through com.google.code.gson:gson-parent:jar:debian
Up-to-date check for task ':compileJava' took 4.091 secs. It is not up-to-date because:
  No history is available.
All input files are considered out-of-date for incremental task ':compileJava'.
Compiling with JDK Java compiler API.
/build/reproducible-path/barclay-5.0.0+dfsg/src/main/java/org/broadinstitute/barclay/utils/Utils.java:173: warning: [deprecation] WordUtils in org.apache.commons.lang3.text has been deprecated
                    .map(line -> WordUtils.wrap(line, width))
                                 ^
/build/reproducible-path/barclay-5.0.0+dfsg/src/main/java/org/broadinstitute/barclay/argparser/ArgumentDefinition.java:40: warning: [this-escape] possible 'this' escape before subclass is fully initialized
        this.underlyingFieldClass = getClassForUnderlyingField();
                                                              ^
/build/reproducible-path/barclay-5.0.0+dfsg/src/main/java/org/broadinstitute/barclay/argparser/PositionalArgumentDefinition.java:43: warning: [this-escape] possible 'this' escape before subclass is fully initialized
        intializeCollection("@PositionalArguments");
                           ^
/build/reproducible-path/barclay-5.0.0+dfsg/src/main/java/org/broadinstitute/barclay/argparser/NamedArgumentDefinition.java:61: warning: [this-escape] possible 'this' escape before subclass is fully initialized
        this.defaultValueAsString = convertDefaultValueToString();
                                                               ^
/build/reproducible-path/barclay-5.0.0+dfsg/src/main/java/org/broadinstitute/barclay/argparser/NamedArgumentDefinition.java:475: warning: [this-escape] previous possible 'this' escape happens here via invocation
        final Object initialValue = getArgumentValue();
                                                    ^
/build/reproducible-path/barclay-5.0.0+dfsg/src/main/java/org/broadinstitute/barclay/argparser/ClassFinder.java:44: warning: [deprecation] URL(String,String,String) in URL has been deprecated
        final URL[] urls = {new URL("file", "", jarPath)};
                            ^
6 warnings
:compileJava (Thread[#46,Task worker for ':',5,main]) completed. Took 11.932 secs.
:processResources (Thread[#46,Task worker for ':',5,main]) started.
:processResources
Putting task artifact state for task ':processResources' into context took 0.0 secs.
Up-to-date check for task ':processResources' took 0.018 secs. It is not up-to-date because:
  No history is available.
:processResources (Thread[#46,Task worker for ':',5,main]) completed. Took 0.09 secs.
:classes (Thread[#46,Task worker for ':',5,main]) started.
:classes
Skipping task ':classes' as it has no actions.
:classes (Thread[#46,Task worker for ':',5,main]) completed. Took 0.002 secs.
:debianMavenPom (Thread[#46,Task worker for ':',5,main]) started.
:debianMavenPom
Putting task artifact state for task ':debianMavenPom' into context took 0.0 secs.
Up-to-date check for task ':debianMavenPom' took 0.003 secs. It is not up-to-date because:
  No history is available.
	Generating pom file /build/reproducible-path/barclay-5.0.0+dfsg/build/debian/barclay.pom
:debianMavenPom (Thread[#46,Task worker for ':',5,main]) completed. Took 0.228 secs.
:jar (Thread[#46,Task worker for ':',5,main]) started.
:jar
Putting task artifact state for task ':jar' into context took 0.0 secs.
Up-to-date check for task ':jar' took 0.034 secs. It is not up-to-date because:
  No history is available.
:jar (Thread[#46,Task worker for ':',5,main]) completed. Took 0.196 secs.

BUILD SUCCESSFUL in 30s
4 actionable tasks: 4 executed
make[1]: Leaving directory '/build/reproducible-path/barclay-5.0.0+dfsg'
   jh_build -O--buildsystem=gradle
	rm -f debian/libbarclay-java.debhelper.log
   debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/barclay-5.0.0+dfsg'
# Tests do not work with locales with a different decimal separator
# (for example ',')
LC_ALL=C.UTF-8 dh_auto_test
	mkdir -p .gradle/init.d
	cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/
	gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=barclay -Dfile.encoding=UTF-8 --parallel --max-workers=4 test
openjdk version "21.0.5" 2024-10-15
OpenJDK Runtime Environment (build 21.0.5+11-Debian-1)
OpenJDK Server VM (build 21.0.5+11-Debian-1, mixed mode, sharing)
Initialized native services in: /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/native
To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html.
Starting process 'Gradle build daemon'. Working directory: /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-21-openjdk-armhf/bin/java --add-opens java.base/java.lang=ALL-UNNAMED -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1
Successfully started process 'Gradle build daemon'
An attempt to start the daemon took 3.028 secs.
The client will now receive all logging from the daemon (pid: 309). The daemon log file: /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/daemon/4.4.1/daemon-309.out.log
Daemon will be stopped at the end of the build stopping after processing
Closing daemon's stdin at end of input.
The daemon will no longer process any standard input.
Using 4 worker leases.
Creating new cache for fileHashes, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@ac794f
Creating new cache for resourceHashesCache, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@ac794f
Creating new cache for fileHashes, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@a68642
Starting Build
Creating new cache for metadata-1.1/results, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@18628fa
Settings evaluated using settings file '/build/reproducible-path/barclay-5.0.0+dfsg/settings.gradle'.
	Settings file not found (/build/reproducible-path/barclay-5.0.0+dfsg/settings.gradle)
	Root project name not defined in settings.gradle, defaulting to 'barclay' instead of the name of the root directory 'barclay-5.0.0+dfsg'
Projects loaded. Root project using build file '/build/reproducible-path/barclay-5.0.0+dfsg/build.gradle'.
Included projects: [root project 'barclay']
	Keep-alive timer started
	Adding Debian repository to project 'barclay'
Parallel execution is an incubating feature.
Evaluating root project 'barclay' using build file '/build/reproducible-path/barclay-5.0.0+dfsg/build.gradle'.
Starting process 'command 'dpkg-parsechangelog''. Working directory: /build/reproducible-path/barclay-5.0.0+dfsg Command: dpkg-parsechangelog -S Version
Successfully started process 'command 'dpkg-parsechangelog''
	Adding Maven pom generation to project 'barclay'
	Linking the generated javadoc to the system JDK API documentation
All projects evaluated.
Selected primary task 'test' from project :
Creating new cache for annotation-processors, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@1110b5e
Tasks to be executed: [task ':compileJava', task ':processResources', task ':classes', task ':compileTestJava', task ':processTestResources', task ':testClasses', task ':test']
Creating new cache for resourceHashesCache, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@a68642
Creating new cache for taskHistory, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@1c074fa
Creating new cache for outputFiles, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@105172
:compileJava (Thread[#29,Daemon worker,5,main]) started.
:compileJava
Putting task artifact state for task ':compileJava' into context took 0.013 secs.
Creating new cache for metadata-2.36/module-metadata, path /build/reproducible-path/barclay-5.0.0+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@1ef9061
	Loading the Maven rules...
	Replacing net.sf.jopt-simple:jopt-simple:jar:5.0.3  ->  net.sf.jopt-simple:jopt-simple:jar:debian
	Replacing org.apache.commons:commons-lang3:jar:3.4  ->  org.apache.commons:commons-lang3:jar:debian
	Passing through org.apache.commons:commons-parent:jar:debian
	Passing through org.apache:apache:jar:debian
	Replacing org.apache.logging.log4j:log4j-api:jar:2.17.1  ->  org.apache.logging.log4j:log4j-api:jar:debian
	Passing through org.apache.logging.log4j:log4j:jar:debian
	Passing through org.apache.logging.log4j:log4j-bom:jar:debian
	Replacing org.apache.logging.log4j:log4j-core:jar:2.15.0  ->  org.apache.logging.log4j:log4j-core:jar:debian
	Replacing org.freemarker:freemarker:jar:2.3.30  ->  org.freemarker:freemarker:jar:debian
	Replacing com.google.code.gson:gson:jar:2.2.2  ->  com.google.code.gson:gson:jar:debian
	Passing through com.google.code.gson:gson-parent:jar:debian
Skipping task ':compileJava' as it is up-to-date (took 1.349 secs).
:compileJava UP-TO-DATE
:compileJava (Thread[#29,Daemon worker,5,main]) completed. Took 1.448 secs.
:processResources (Thread[#29,Daemon worker,5,main]) started.
:processResources
Putting task artifact state for task ':processResources' into context took 0.0 secs.
Skipping task ':processResources' as it is up-to-date (took 0.034 secs).
:processResources UP-TO-DATE
:processResources (Thread[#29,Daemon worker,5,main]) completed. Took 0.047 secs.
:classes (Thread[#29,Daemon worker,5,main]) started.
:classes
Skipping task ':classes' as it has no actions.
:classes UP-TO-DATE
:classes (Thread[#29,Daemon worker,5,main]) completed. Took 0.003 secs.
:compileTestJava (Thread[#29,Daemon worker,5,main]) started.
:compileTestJava
Putting task artifact state for task ':compileTestJava' into context took 0.0 secs.
	Replacing commons-io:commons-io:jar:2.11.0  ->  commons-io:commons-io:jar:debian
	Passing through org.testng:testng:jar:debian
	Replacing org.mockito:mockito-core:jar:4.6.1  ->  org.mockito:mockito-core:jar:debian
	Passing through org.beanshell:bsh:jar:debian
	Passing through com.beust:jcommander:jar:debian
	Passing through net.bytebuddy:byte-buddy:jar:debian
	Passing through net.bytebuddy:byte-buddy-parent:jar:debian
	Passing through net.bytebuddy:byte-buddy-agent:jar:debian
	Passing through org.objenesis:objenesis:jar:debian
	Passing through org.objenesis:objenesis-parent:jar:debian
	Passing through net.bytebuddy:byte-buddy-dep:jar:debian
	Passing through org.ow2.asm:asm:jar:debian
	Passing through org.ow2.asm:asm-commons:jar:debian
Up-to-date check for task ':compileTestJava' took 5.158 secs. It is not up-to-date because:
  No history is available.
All input files are considered out-of-date for incremental task ':compileTestJava'.
Compiling with JDK Java compiler API.
:compileTestJava (Thread[#29,Daemon worker,5,main]) completed. Took 12.917 secs.
:processTestResources (Thread[#29,Daemon worker,5,main]) started.
:processTestResources
Putting task artifact state for task ':processTestResources' into context took 0.0 secs.
Up-to-date check for task ':processTestResources' took 0.055 secs. It is not up-to-date because:
  No history is available.
:processTestResources (Thread[#29,Daemon worker,5,main]) completed. Took 0.202 secs.
:testClasses (Thread[#29,Daemon worker,5,main]) started.
:testClasses
Skipping task ':testClasses' as it has no actions.
:testClasses (Thread[#29,Daemon worker,5,main]) completed. Took 0.002 secs.
:test (Thread[#29,Daemon worker,5,main]) started.
:test
Putting task artifact state for task ':test' into context took 0.002 secs.
Up-to-date check for task ':test' took 1.716 secs. It is not up-to-date because:
  Task.upToDateWhen is false.
Starting process 'Gradle Test Executor 1'. Working directory: /build/reproducible-path/barclay-5.0.0+dfsg Command: /usr/lib/jvm/java-21-openjdk-armhf/bin/java -Dorg.gradle.native=false @/tmp/gradle-worker-classpath9776206115888787940txt -Dfile.encoding=UTF-8 -Duser.country -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 1'
Successfully started process 'Gradle Test Executor 1'
Gradle Test Executor 1 started executing tests.
Running Test: Test method testCollectionFromExpansionFile[0](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@af9c6e, [], /tmp/enabledExpansion11884989177806241091.args, [Ljava.lang.String;@11f5243, [Ljava.lang.String;@5f9f3c, false)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testCollectionFromExpansionFile[1](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@13771fc, [APPEND_TO_COLLECTIONS], /tmp/enabledExpansion8611941972332785456.args, [Ljava.lang.String;@11f5243, [Ljava.lang.String;@b04194, false)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testCollectionFromExpansionFile[2](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@fbada9, [], /tmp/enabledExpansion9631072321541320228.list, [Ljava.lang.String;@11f5243, [Ljava.lang.String;@78f0b8, false)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testCollectionFromExpansionFile[3](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@129432e, [APPEND_TO_COLLECTIONS], /tmp/enabledExpansion10236319277580527049.list, [Ljava.lang.String;@11f5243, [Ljava.lang.String;@1e9ab8a, false)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testCollectionFromExpansionFile[4](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$SuppressedListFileArguments@18d7e29, [], /tmp/enabledExpansion17465975605989435768.args, [Ljava.lang.String;@11f5243, [Ljava.lang.String;@15cc50, true)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testCollectionFromExpansionFile[5](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$SuppressedListFileArguments@55fb84, [APPEND_TO_COLLECTIONS], /tmp/enabledExpansion13221949784675196211.args, [Ljava.lang.String;@11f5243, [Ljava.lang.String;@11c257d, true)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testCollectionFromExpansionFile[6](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$SuppressedListFileArguments@151342e, [], /tmp/enabledExpansion10652109657256664111.list, [Ljava.lang.String;@11f5243, [Ljava.lang.String;@bf64ff, true)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testCollectionFromExpansionFile[7](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$SuppressedListFileArguments@1677b55, [APPEND_TO_COLLECTIONS], /tmp/enabledExpansion10032623867931485037.list, [Ljava.lang.String;@11f5243, [Ljava.lang.String;@1bad63e, true)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testCollectionFromListFileMixed[0](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@8eb7b8, [], [Ljava.lang.String;@14b0919, [Ljava.lang.String;@1302c5c, [Ljava.lang.String;@17173f8, [Ljava.lang.String;@f53119)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testCollectionFromListFileMixed[1](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@12f62a, [APPEND_TO_COLLECTIONS], [Ljava.lang.String;@14b0919, [Ljava.lang.String;@1302c5c, [Ljava.lang.String;@17abd67, [Ljava.lang.String;@c87ceb)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testCollectionThatCannotBeAutoInitialized(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testGetCommandLineWithExpansionFile(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testInitializedCollections[0]([Ljava.lang.String;@900cec, [APPEND_TO_COLLECTIONS], [foo, bar, baz, frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testInitializedCollections[1]([Ljava.lang.String;@900cec, [], [baz, frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testInitializedCollections[2]([Ljava.lang.String;@b12151, [APPEND_TO_COLLECTIONS], [baz, frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testInitializedCollections[3]([Ljava.lang.String;@b12151, [], [baz, frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testInitializedCollections[4]([Ljava.lang.String;@69eac, [APPEND_TO_COLLECTIONS], [frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testInitializedCollections[5]([Ljava.lang.String;@69eac, [], [frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testInitializedCollections[6]([Ljava.lang.String;@cfcd5e, [APPEND_TO_COLLECTIONS], [foo, bar])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testInitializedCollections[7]([Ljava.lang.String;@1700667, [[]], [foo, bar])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testPositionalCollectionFromExpansionFile(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testRejectNonCollectionFileExpansionSuppression(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testUninitializedCollections[0]([Ljava.lang.String;@19b2f3, [], [L1, L2], [S1], [HS1], [P1, P2])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method testUninitializedCollections[1]([Ljava.lang.String;@19b2f3, [APPEND_TO_COLLECTIONS], [L1, L2], [S1], [HS1], [P1, P2])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests)
Running Test: Test method passingMutexCheck[0](simple mutex, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MutexArguments@1ba45b5, [Ljava.lang.String;@183cdbc)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method passingMutexCheck[1](collection mixed, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MixedCardinalityMutexArguments@478e15, [Ljava.lang.String;@ea0ee1)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method passingMutexCheck[2](collection multiple mixed, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MixedCardinalityMutexArguments@1475021, [Ljava.lang.String;@72546a)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method passingMutexCheck[3](scalar mixed, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MixedCardinalityMutexArguments@48d61c, [Ljava.lang.String;@17b2b42)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testAbbreviationsAreRejected(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testAdvancedArguments(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testArgCollectionNotInitialized(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testArgUsage[0](org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$FrobnicateArguments@1adcc1f, [--FROBNICATION_FLAVOR <FrobnicationFlavor>, --SHMIGGLE_TYPE <String>, --arguments_file <File>, --FROBNICATION_THRESHOLD,-T <Integer>, --TRUTHINESS <Boolean>])(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testArgUsage[1](org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$FrobnicateArguments@16f0240, [--deprecatedString, This argument is DEPRECATED, and will be removed in a future])(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testArgUsage[2](org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MixedCardinalityMutexArguments@1e80525, [--collection <String>, --scalar <String>])(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testArgumentCollection(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testArgumentNameCollision(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testArgumentUseClash(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testArgumentsFile(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testArgumentsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testArrayArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testBadFieldCausesException(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testBadValue(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testBetaExperimentalMutex(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testBetaFeatureUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testCombinationOfFlags(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testDanglingMutex(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testDefault(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testEnsureClusteringDisabled(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testEnumSet(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testEnumSetNegative(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testExperimentalFeatureUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testFailingMutex[0](no args, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MutexArguments@163958f, [Ljava.lang.String;@1999abe)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testFailingMutex[1](1 of group required, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MutexArguments@18b43ef, [Ljava.lang.String;@7f21e8)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testFailingMutex[2](mutex, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MutexArguments@12a0b50, [Ljava.lang.String;@b312c)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testFailingMutex[3](mega mutex, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MutexArguments@b0c1c8, [Ljava.lang.String;@1d62998)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testFailingMutex[4](collection and scalar mutex mix, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MixedCardinalityMutexArguments@17b98d0, [Ljava.lang.String;@92f326)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testFlagNoArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testFlagWithPositionalFollowing(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testFlagsWithArguments(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testGatherArgumentValuesOfType[0]([--childSuperTypeTarget, childSuperTypeTargetValue, --childSubTypeTarget, childSubTypeTargetValue, --parentSuperTypeTarget, parentSuperTypeTargetValue, --parentSubTypeTarget, parentSubTypeTargetValue, --childCollectionSuperTypeTarget, childCollectionSuperTypeTargetValue, --childCollectionSubTypeTarget, childCollectionSubTypeTargetValue, --parentCollectionSuperTypeTarget, parentCollectionSuperTypeTargetValue, --parentCollectionSubTypeTarget, parentCollectionSubTypeTargetValue, --childListSuperTypeTarget, childListSuperTypeTargetValue1, --childListSuperTypeTarget, childListSuperTypeTargetValue2, --childListSuperTypeTarget, childListSuperTypeTargetValue3, --childListSubTypeTarget, childListSubTypeTargetValue1, --childListSubTypeTarget, childListSubTypeTargetValue2, --childListSubTypeTarget, childListSubTypeTargetValue3, --parentListSuperTypeTarget, parentListSuperTypeTargetValue1, --parentListSuperTypeTarget, parentListSuperTypeTargetValue2, --parentListSuperTypeTarget, parentListSuperTypeTargetValue3, --parentListSubTypeTarget, parentListSubTypeTargetValue1, --parentListSubTypeTarget, parentListSubTypeTargetValue2, --parentListSubTypeTarget, parentListSubTypeTargetValue3, --childCollectionListSuperTypeTarget, childCollectionListSuperTypeTargetValue1, --childCollectionListSuperTypeTarget, childCollectionListSuperTypeTargetValue2, --childCollectionListSuperTypeTarget, childCollectionListSuperTypeTargetValue3, --childNonTargetArgument, 1, --parentNonTargetArgument, 1, --childCollectionNonTargetArgument, 1, --parentCollectionNonTargetArgument, 1, --childNonTargetListArgument, 1], [(childCollectionListSuperTypeTarget,childCollectionListSuperTypeTargetValue1), (childCollectionListSuperTypeTarget,childCollectionListSuperTypeTargetValue2), (childCollectionListSuperTypeTarget,childCollectionListSuperTypeTargetValue3), (childCollectionSubTypeTarget,childCollectionSubTypeTargetValue), (childCollectionSuperTypeTarget,childCollectionSuperTypeTargetValue), (childListSubTypeTarget,childListSubTypeTargetValue1), (childListSubTypeTarget,childListSubTypeTargetValue2), (childListSubTypeTarget,childListSubTypeTargetValue3), (childListSuperTypeTarget,childListSuperTypeTargetValue1), (childListSuperTypeTarget,childListSuperTypeTargetValue2), (childListSuperTypeTarget,childListSuperTypeTargetValue3), (childSubTypeTarget,childSubTypeTargetValue), (childSuperTypeTarget,childSuperTypeTargetValue), (parentCollectionSubTypeTarget,parentCollectionSubTypeTargetValue), (parentCollectionSuperTypeTarget,parentCollectionSuperTypeTargetValue), (parentListSubTypeTarget,parentListSubTypeTargetValue1), (parentListSubTypeTarget,parentListSubTypeTargetValue2), (parentListSubTypeTarget,parentListSubTypeTargetValue3), (parentListSuperTypeTarget,parentListSuperTypeTargetValue1), (parentListSuperTypeTarget,parentListSuperTypeTargetValue2), (parentListSuperTypeTarget,parentListSuperTypeTargetValue3), (parentSubTypeTarget,parentSubTypeTargetValue), (parentSuperTypeTarget,parentSuperTypeTargetValue), (uninitializedChildCollectionTarget,null), (uninitializedChildListTarget,null), (uninitializedChildTarget,null), (uninitializedParentCollectionTarget,null), (uninitializedParentTarget,null)])(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testGatherArgumentValuesOfTypeWithParameterizedType(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testGetCommandLine(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testGetCommandLineWithSensitiveArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: USAGE: BooleanFlags [arguments]


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest.testHelp STANDARD_ERROR
    USAGE: BooleanFlags [arguments]
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Usage: program [arguments...]

    Usage: program [arguments...]
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Version:null

    Version:null
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Optional Arguments:

    Optional Arguments:
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --antiflag1 <Boolean>         Undocumented option  Default value: false. Possible values: {true, false}  Cannot be used

    --antiflag1 <Boolean>         Undocumented option  Default value: false. Possible values: {true, false}  Cannot be used
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err:                               in conjunction with argument(s) flag1

                                  in conjunction with argument(s) flag1
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --arguments_file <File>       read one or more arguments files and add them to the command line  This argument may be

    --arguments_file <File>       read one or more arguments files and add them to the command line  This argument may be
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err:                               specified 0 or more times. Default value: null. 

                                  specified 0 or more times. Default value: null. 
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --flag1 <Boolean>             Undocumented option  Default value: false. Possible values: {true, false}  Cannot be used

    --flag1 <Boolean>             Undocumented option  Default value: false. Possible values: {true, false}  Cannot be used
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err:                               in conjunction with argument(s) antiflag1

                                  in conjunction with argument(s) antiflag1
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --flag2 <Boolean>             Undocumented option  Default value: true. Possible values: {true, false} 

    --flag2 <Boolean>             Undocumented option  Default value: true. Possible values: {true, false} 
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --flag3 <Boolean>             Undocumented option  Default value: false. Possible values: {true, false} 

    --flag3 <Boolean>             Undocumented option  Default value: false. Possible values: {true, false} 
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --help,-h <Boolean>           display the help message  Default value: false. Possible values: {true, false} 

    --help,-h <Boolean>           display the help message  Default value: false. Possible values: {true, false} 
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --version <Boolean>           display the version number for this tool  Default value: false. Possible values: {true,

    --version <Boolean>           display the version number for this tool  Default value: false. Possible values: {true,
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err:                               false} 

                                  false} 
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Advanced Arguments:

    Advanced Arguments:
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --showHidden <Boolean>        display hidden arguments  Default value: false. Possible values: {true, false} 

    --showHidden <Boolean>        display hidden arguments  Default value: false. Possible values: {true, false} 
Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testHiddenArguments(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testHiddenRequiredArgumentThrowException(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testLongPreamble(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testMissingRequiredCollectionArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testNotEnoughOfListArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testOnlyPrintNameOnce(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testOptionalOnlyUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testOutOfRangesArguments[0]([Ljava.lang.String;@fa4032)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testOutOfRangesArguments[1]([Ljava.lang.String;@169d989)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testOutOfRangesArguments[2]([Ljava.lang.String;@785858)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testOutOfRangesArguments[3]([Ljava.lang.String;@1b26518)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testOutOfRangesArguments[4]([Ljava.lang.String;@189ba23)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testOutOfRangesArguments[5]([Ljava.lang.String;@2683d8)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testOutOfRangesArguments[6]([Ljava.lang.String;@3e7e2d)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testPositionalDeprecated(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testPositive(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testPrivateArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testRequiredAdvancedNotAllowed(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testRequiredOnlyUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testRequiredOptionalWithDefaultUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testRequiredOptionalWithoutDefaultUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testSetNonNullableArgumentsToNull[0]([Ljava.lang.String;@98d4d8)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testSetNonNullableArgumentsToNull[1]([Ljava.lang.String;@1431a42)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testSetNonNullableArgumentsToNull[2]([Ljava.lang.String;@2b36e5)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testVersionSpecialFlag(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Test: Test method testVersionSpecialFlag(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Version:null


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest.testVersionSpecialFlag STANDARD_ERROR
    Version:null
Running Test: Test method testWithBoundariesArgumentsForNoNumeric(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithDoubleBoundariesArgumentsForInteger(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithinBoundariesArguments[0]([Ljava.lang.String;@1a74077, null, null, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithinBoundariesArguments[1]([Ljava.lang.String;@84082e, null, null, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithinBoundariesArguments[2]([Ljava.lang.String;@1382815, null, null, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithinBoundariesArguments[3]([Ljava.lang.String;@14c8b01, null, null, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithinBoundariesArguments[4]([Ljava.lang.String;@1acbdd6, null, null, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithinBoundariesArguments[5]([Ljava.lang.String;@17995a6, 1, null, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithinBoundariesArguments[6]([Ljava.lang.String;@ca6aca, null, 2.0, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithinBoundariesArguments[7]([Ljava.lang.String;@104b740, null, null, somestring)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithinBoundariesArguments[8]([Ljava.lang.String;@ffce52, 1, 2.0, somestring)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithoutPositionalWithDefaultUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testWithoutPositionalWithoutDefaultUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest)
Running Test: Test method testBasicPlugin[0]([Ljava.lang.String;@c1979f, 0)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest)
Running Test: Test method testBasicPlugin[1]([Ljava.lang.String;@104b0ab, 1)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest)
Running Test: Test method testDanglingFilterArguments[0](TestPluginWithRequiredArg, requiredStringArgForPlugin, fakeArgValue)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest)
Running Test: Test method testDanglingFilterArguments[1](TestPluginWithOptionalArg, optionalStringArgForPlugin, fakeArgValue)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest)
Running Test: Test method testDefaultIncludePluginClass[0](class org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest$TestPluginBase, true)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest)
Running Test: Test method testDefaultIncludePluginClass[1](class org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest$TestPluginWithOptionalArg, true)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest)
Running Test: Test method testDefaultIncludePluginClass[2](class java.lang.Integer, false)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest)
Running Test: Test method testEnableNonExistentPlugin(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest)
Running Test: Test method testNoPluginsSpecified(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest)
Running Test: Test method testAddToDefaultValuesListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testArgumentCollectionFlat(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testArgumentCollectionNested(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testArgumentCollectionNoReferenceProvidedForOptional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'REFERENCE_SEQUENCE' is required.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testArgumentCollectionNoReferenceProvidedForRequired STANDARD_ERROR
    ERROR: Option 'REFERENCE_SEQUENCE' is required.
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: ToolWithRequiredReference [options]

    USAGE: ToolWithRequiredReference [options]
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: program [options...]

    Usage: program [options...]
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: REFERENCE_SEQUENCE=File       A reference is required  Required. 

    REFERENCE_SEQUENCE=File       A reference is required  Required. 
Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testArgumentCollectionWithReferenceProvidedForOptional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testArgumentCollectionWithReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: 'HiMom' is not a valid value for FrobnicationFlavor.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testBadEnumValue STANDARD_ERROR
    ERROR: 'HiMom' is not a valid value for FrobnicationFlavor.
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options]

    USAGE: FrobnicateOptions [options]
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line

    OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               options, unrecognized options are ignored.  A single-valued option set in an options file

                                  options, unrecognized options are ignored.  A single-valued option set in an options file
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               may be overridden by a subsequent command-line option.  A line starting with '#' is

                                  may be overridden by a subsequent command-line option.  A line starting with '#' is
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               considered a comment.  Required. 

                                  considered a comment.  Required. 
Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Problem constructing Integer from the string 'ABC'.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testBadValue STANDARD_ERROR
    ERROR: Problem constructing Integer from the string 'ABC'.
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options]

    USAGE: FrobnicateOptions [options]
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line

    OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               options, unrecognized options are ignored.  A single-valued option set in an options file

                                  options, unrecognized options are ignored.  A single-valued option set in an options file
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               may be overridden by a subsequent command-line option.  A line starting with '#' is

                                  may be overridden by a subsequent command-line option.  A line starting with '#' is
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               considered a comment.  Required. 

                                  considered a comment.  Required. 
Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testBetaExperimentalMutex(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testBetaFeatureUsage(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testClearDefaultValuesFromListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testClearDefaultValuesFromListOptionAndAddNew(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testCollectionThatCannotBeAutoInitialized(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testDefault(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testExperimentalFeatureUsage(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testForIdenticalShortName(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[0](hello, hello)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[1](, )(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[2](hi</th>bye, hi	bye)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[3](hi<th>bye, hibye)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[4](hi<li>bye, hi - bye)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[5](hi<NOT_A_REAL_TAG>bye, hibye)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[6](</h4><pre>, 

)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[7](<a href="http://go.here.org"> string</ a >,  string (http://go.here.org))(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[8](<a href="http://go.here.org" > string</ a>,  string (http://go.here.org))(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[9](< a href="http://go.here.org"> string<a />,  string (http://go.here.org))(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[10](hi</li>bye, hi
bye)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[11](Using read outputs from high throughput sequencing (HTS) technologies, this tool provides metrics regarding the quality of read alignments to a reference sequence, as well as the proportion of the reads that passed machine signal-to-noise threshold quality filters (Illumina).<h4>Usage example:</h4><pre>    java -jar picard.jar CollectAlignmentSummaryMetrics \<br />          R=reference_sequence.fasta \<br />          I=input.bam \<br />          O=output.txt</pre>Please see <a href='http://broadinstitute.github.io/picard/picard-metric-definitions.html#AlignmentSummaryMetrics'>the AlignmentSummaryMetrics documentation</a> for detailed explanations of each metric. <br /> <br />Additional information about Illumina's quality filters can be found in the following documents on the Illumina website:<ul><li><a href="http://support.illumina.com/content/dam/illumina-marketing/documents/products/technotes/hiseq-x-percent-pf-technical-note-770-2014-043.pdf">hiseq-x-percent-pf-technical-note</a></li><li><a href="http://support.illumina.com/content/dam/illumina-support/documents/documentation/system_documentation/hiseqx/hiseq-x-system-guide-15050091-d.pdf">hiseq-x-system-guide</a></li></ul><hr />, Using read outputs from high throughput sequencing (HTS) technologies, this tool provides metrics regarding the quality of read alignments to a reference sequence, as well as the proportion of the reads that passed machine signal-to-noise threshold quality filters (Illumina).
Usage example:

    java -jar picard.jar CollectAlignmentSummaryMetrics \
          R=reference_sequence.fasta \
          I=input.bam \
          O=output.txt
Please see the AlignmentSummaryMetrics documentation (http://broadinstitute.github.io/picard/picard-metric-definitions.html#AlignmentSummaryMetrics) for detailed explanations of each metric. 
 
Additional information about Illumina's quality filters can be found in the following documents on the Illumina website:
 - hiseq-x-percent-pf-technical-note (http://support.illumina.com/content/dam/illumina-marketing/documents/products/technotes/hiseq-x-percent-pf-technical-note-770-2014-043.pdf)
 - hiseq-x-system-guide (http://support.illumina.com/content/dam/illumina-support/documents/documentation/system_documentation/hiseqx/hiseq-x-system-guide-15050091-d.pdf)


)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHtmlUnescape[0](<, &lt;)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHtmlUnescape[1](x<y, x&lt;y)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHtmlUnescape[2](x<y<z, x&lt;y&lt;z)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHtmlUnescape[3](
, <p>)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHtmlUnescape[4](<html> x<y </html> y< <strong> x </strong>, <html> x&lt;y </html> y&lt; <strong> x </strong>)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testIgnoringBoundaries[0](-15)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testIgnoringBoundaries[1](-5)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testIgnoringBoundaries[2](-2)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testIgnoringBoundaries[3](1)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testIgnoringBoundaries[4](0)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testIgnoringBoundaries[5](2)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testIgnoringBoundaries[6](5)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testIgnoringBoundaries[7](10)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testLongPreamble(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'FROBNICATION_FLAVOR' is required.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testMissingRequiredArgument STANDARD_ERROR
    ERROR: Option 'FROBNICATION_FLAVOR' is required.
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options]

    USAGE: FrobnicateOptions [options]
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testMutex[0](pass, [Ljava.lang.String;@1426889, true)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'A' is required unless any of [Y, Z, M, N] are specified.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testMutex[1](no args, [Ljava.lang.String;@126a70e, false) STANDARD_ERROR
    ERROR: Option 'A' is required unless any of [Y, Z, M, N] are specified.
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: MutexOptions [options]

    USAGE: MutexOptions [options]
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: program [options...]

    Usage: program [options...]
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: A=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N

    A=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: B=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N

    B=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: M=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z

    M=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: N=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z

    N=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Y=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N

    Y=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Z=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N

    Z=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N
Test: Test method testMutex[1](no args, [Ljava.lang.String;@126a70e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'B' is required unless any of [Y, Z, M, N] are specified.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false) STANDARD_ERROR
    ERROR: Option 'B' is required unless any of [Y, Z, M, N] are specified.
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: MutexOptions [options]

    USAGE: MutexOptions [options]
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: program [options...]

    Usage: program [options...]
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: A=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N

    A=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: B=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N

    B=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: M=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z

    M=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: N=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z

    N=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Y=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N

    Y=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Z=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N

    Z=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N
Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@2859e, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'A' cannot be used in conjunction with option(s) Y


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false) STANDARD_ERROR
    ERROR: Option 'A' cannot be used in conjunction with option(s) Y
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: MutexOptions [options]

    USAGE: MutexOptions [options]
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: program [options...]

    Usage: program [options...]
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: A=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N

    A=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: B=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N

    B=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: M=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z

    M=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: N=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z

    N=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Y=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N

    Y=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Z=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N

    Z=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N
Test: Test method testMutex[3](mutex, [Ljava.lang.String;@90c6f4, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'A' cannot be used in conjunction with option(s) Y Z M N


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false) STANDARD_ERROR
    ERROR: Option 'A' cannot be used in conjunction with option(s) Y Z M N
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: MutexOptions [options]

    USAGE: MutexOptions [options]
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: program [options...]

    Usage: program [options...]
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: A=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N

    A=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: B=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N

    B=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) Y Z M N
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: M=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z

    M=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: N=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z

    N=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B Y Z
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Y=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N

    Y=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Z=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N

    Z=String                      Undocumented option  Required.  Cannot be used in conjuction with option(s) A B M N
Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@11708ba, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testNonASCIIAccept(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testNonASCIIReject(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testNonAsciiAssertion(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testNonAsciiConverted(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'SHMIGGLE_TYPE' must be specified at least 1 times.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testNotEnoughOfListOption STANDARD_ERROR
    ERROR: Option 'SHMIGGLE_TYPE' must be specified at least 1 times.
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options]

    USAGE: FrobnicateOptions [options]
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: At least 2 positional arguments must be specified.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testNotEnoughPositional STANDARD_ERROR
    ERROR: At least 2 positional arguments must be specified.
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options]

    USAGE: FrobnicateOptions [options]
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: non-null value must be provided for 'FROBNICATION_THRESHOLD'.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testNullValue STANDARD_ERROR
    ERROR: non-null value must be provided for 'FROBNICATION_THRESHOLD'.
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptionsWithNullList [options]

    USAGE: FrobnicateOptionsWithNullList [options]
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Required. 

    T=Integer                     Frobnication threshold setting.  Required. 
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Default value: BAR. This option can be set to 'null' to clear the

                                  Undocumented option  Default value: BAR. This option can be set to 'null' to clear the
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               default value. Possible values: {FOO, BAR, BAZ} 

                                  default value. Possible values: {FOO, BAR, BAZ} 
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option must be specified no more than 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option must be specified no more than 3
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Default value: false. This option can be set to 'null' to clear the

    TRUTHINESS=Boolean            Undocumented option  Default value: false. This option can be set to 'null' to clear the
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               default value. Possible values: {true, false} 

                                  default value. Possible values: {true, false} 
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line

    OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               options, unrecognized options are ignored.  A single-valued option set in an options file

                                  options, unrecognized options are ignored.  A single-valued option set in an options file
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               may be overridden by a subsequent command-line option.  A line starting with '#' is

                                  may be overridden by a subsequent command-line option.  A line starting with '#' is
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               considered a comment.  Required. 

                                  considered a comment.  Required. 
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: non-null value must be provided for 'FROBNICATION_THRESHOLD'.

    ERROR: non-null value must be provided for 'FROBNICATION_THRESHOLD'.
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptionsWithNullList [options]

    USAGE: FrobnicateOptionsWithNullList [options]
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Required. 

    T=Integer                     Frobnication threshold setting.  Required. 
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Default value: BAR. This option can be set to 'null' to clear the

                                  Undocumented option  Default value: BAR. This option can be set to 'null' to clear the
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               default value. Possible values: {FOO, BAR, BAZ} 

                                  default value. Possible values: {FOO, BAR, BAZ} 
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option must be specified no more than 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option must be specified no more than 3
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Default value: false. This option can be set to 'null' to clear the

    TRUTHINESS=Boolean            Undocumented option  Default value: false. This option can be set to 'null' to clear the
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               default value. Possible values: {true, false} 

                                  default value. Possible values: {true, false} 
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line

    OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               options, unrecognized options are ignored.  A single-valued option set in an options file

                                  options, unrecognized options are ignored.  A single-valued option set in an options file
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               may be overridden by a subsequent command-line option.  A line starting with '#' is

                                  may be overridden by a subsequent command-line option.  A line starting with '#' is
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               considered a comment.  Required. 

                                  considered a comment.  Required. 
Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testOptionDefinitionCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'FROBNICATION_FLAVOR' cannot be specified more than once.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testOptionUseCaseClash STANDARD_ERROR
    ERROR: Option 'FROBNICATION_FLAVOR' cannot be specified more than once.
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options]

    USAGE: FrobnicateOptions [options]
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line

    OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               options, unrecognized options are ignored.  A single-valued option set in an options file

                                  options, unrecognized options are ignored.  A single-valued option set in an options file
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               may be overridden by a subsequent command-line option.  A line starting with '#' is

                                  may be overridden by a subsequent command-line option.  A line starting with '#' is
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               considered a comment.  Required. 

                                  considered a comment.  Required. 
Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testOptionsFile(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'T' cannot be specified more than once.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testOptionsFileWithDisallowedOverride STANDARD_ERROR
    ERROR: Option 'T' cannot be specified more than once.
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options]

    USAGE: FrobnicateOptions [options]
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line

    OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               options, unrecognized options are ignored.  A single-valued option set in an options file

                                  options, unrecognized options are ignored.  A single-valued option set in an options file
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               may be overridden by a subsequent command-line option.  A line starting with '#' is

                                  may be overridden by a subsequent command-line option.  A line starting with '#' is
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               considered a comment.  Required. 

                                  considered a comment.  Required. 
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options]

    USAGE: FrobnicateOptions [options]
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line

    OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               options, unrecognized options are ignored.  A single-valued option set in an options file

                                  options, unrecognized options are ignored.  A single-valued option set in an options file
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               may be overridden by a subsequent command-line option.  A line starting with '#' is

                                  may be overridden by a subsequent command-line option.  A line starting with '#' is
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               considered a comment.  Required. 

                                  considered a comment.  Required. 
Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testPositive(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testPositiveTerminalEqualSign(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testPositiveWithSpaces(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testPositiveWithoutPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'SHMIGGLE_TYPE' cannot be used more than 3 times.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testTooManyListOption STANDARD_ERROR
    ERROR: Option 'SHMIGGLE_TYPE' cannot be used more than 3 times.
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options]

    USAGE: FrobnicateOptions [options]
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line

    OPTIONS_FILE=File             File of OPTION_NAME=value pairs.  No positional parameters allowed.  Unlike command-line
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               options, unrecognized options are ignored.  A single-valued option set in an options file

                                  options, unrecognized options are ignored.  A single-valued option set in an options file
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               may be overridden by a subsequent command-line option.  A line starting with '#' is

                                  may be overridden by a subsequent command-line option.  A line starting with '#' is
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               considered a comment.  Required. 

                                  considered a comment.  Required. 
Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: No more than 2 positional arguments may be specified on the command line.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testTooManyPositional STANDARD_ERROR
    ERROR: No more than 2 positional arguments may be specified on the command line.
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options]

    USAGE: FrobnicateOptions [options]
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file

    Usage: frobnicate [options] input-file output-file
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file

    Read input-file, frobnicate it, and write frobnicated results to output-file
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Invalid argument 'positional'.


Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testUnexpectedPositional STANDARD_ERROR
    ERROR: Invalid argument 'positional'.
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: OptionsWithoutPositional [options]

    USAGE: OptionsWithoutPositional [options]
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: framistat [options]

    Usage: framistat [options]
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Compute the plebnick of the freebozzle.

    Compute the plebnick of the freebozzle.
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null

    Version: null
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options:

    Options:
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help

    --help
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h                            Displays options specific to this tool.

    -h                            Displays options specific to this tool.
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp

    --stdhelp
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H                            Displays options specific to this tool AND options common to all Picard command line

    -H                            Displays options specific to this tool AND options common to all Picard command line
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               tools.

                                  tools.
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version                     Displays program version.

    --version                     Displays program version.
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer

    FROBNICATION_THRESHOLD=Integer
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to

    T=Integer                     Frobnication threshold setting.  Default value: 20. This option can be set to 'null' to
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               clear the default value. 

                                  clear the default value. 
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor

    FROBNICATION_FLAVOR=FrobnicationFlavor
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 

                                  Undocumented option  Required. Possible values: {FOO, BAR, BAZ} 
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3

    SHMIGGLE_TYPE=String          Allowed shmiggle types.  Default value: null. This option may be specified between 1 and 3
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err:                               times. 

                                  times. 
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 

    TRUTHINESS=Boolean            Undocumented option  Required. Possible values: {true, false} 
Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: 


Running Test: Test method testUninitializedCollections(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testUsage(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testUsageWithDefault(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testUsageWithoutPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testUsageWithoutPositionalWithDefault(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testDefaultValueAsString[0](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$1@1d5d714, arg, true, 0)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[1](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$2@e42a1d, arg, true, 0)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[2](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$3@132c3af, arg, true, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[3](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$4@b7b057, arg, false, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[4](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$5@bca583, arg, true, 27)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[5](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$6@2d5ac, arg, true, 27)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[6](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$7@1205cec, arg, true, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[7](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$8@10b1452, arg, false, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[8](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$9@12358fa, arg, true, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[9](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$10@1bffa08, arg, false, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[10](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$11@13f8ab8, arg, true, [stuff])(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testDefaultValueAsString[11](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$12@117c846, arg, true, [stuff, more stuff])(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetArgumentAliasDisplayString[0](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$13@1102840, arg, arg, [arg], arg)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetArgumentAliasDisplayString[1](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$14@13f5dc, arg, arg, [shortName, arg], shortName/arg)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetArgumentAliasDisplayString[2](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$15@14643c6, arg, fullName, [fullName], fullName)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetArgumentAliasDisplayString[3](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$16@f259e, arg, fullName, [shortName, fullName], shortName/fullName)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetArgumentAliases[0](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$13@1d12cd3, arg, arg, [arg], arg)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetArgumentAliases[1](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$14@1b89a52, arg, arg, [shortName, arg], shortName/arg)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetArgumentAliases[2](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$15@18ef7ec, arg, fullName, [fullName], fullName)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetArgumentAliases[3](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$16@108db17, arg, fullName, [shortName, fullName], shortName/fullName)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetLongName[0](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$13@1c7a665, arg, arg, [arg], arg)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetLongName[1](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$14@1aee6fe, arg, arg, [shortName, arg], shortName/arg)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetLongName[2](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$15@8a3f50, arg, fullName, [fullName], fullName)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetLongName[3](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$16@4e4b0d, arg, fullName, [shortName, fullName], shortName/fullName)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[0](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$1@15e64cd, arg, true, 0)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[1](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$2@10402df, arg, true, 0)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[2](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$3@8b4a32, arg, true, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[3](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$4@14c93ad, arg, false, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[4](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$5@e546db, arg, true, 27)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[5](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$6@d15bdd, arg, true, 27)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[6](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$7@aecbd2, arg, true, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[7](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$8@173111, arg, false, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[8](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$9@2c8011, arg, true, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[9](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$10@197d233, arg, false, null)(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[10](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$11@dac502, arg, true, [stuff])(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testIsOptional[11](org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest$12@17d7e3, arg, true, [stuff, more stuff])(org.broadinstitute.barclay.argparser.NamedArgumentDefinitionUnitTest)
Running Test: Test method testGetCommandLineDisplayString[0]([Ljava.lang.String;@e8d4b2, )(org.broadinstitute.barclay.argparser.PositionalArgumentsDefinitionUnitTest)
Running Test: Test method testGetCommandLineDisplayString[1]([Ljava.lang.String;@466554, arg1)(org.broadinstitute.barclay.argparser.PositionalArgumentsDefinitionUnitTest)
Running Test: Test method testGetCommandLineDisplayString[2]([Ljava.lang.String;@257f83, arg1 arg2)(org.broadinstitute.barclay.argparser.PositionalArgumentsDefinitionUnitTest)
Running Test: Test method testMaxElements(org.broadinstitute.barclay.argparser.PositionalArgumentsDefinitionUnitTest)
Running Test: Test method testMinElements(org.broadinstitute.barclay.argparser.PositionalArgumentsDefinitionUnitTest)
Running Test: Test method testMinElementsGreaterThanMaxElements(org.broadinstitute.barclay.argparser.PositionalArgumentsDefinitionUnitTest)
Running Test: Test method testNonCollection(org.broadinstitute.barclay.argparser.PositionalArgumentsDefinitionUnitTest)
Running Test: Test method recognizedValues(org.broadinstitute.barclay.argparser.StrictBooleanConverterTest)
Running Test: Test method unrecognizedValues(org.broadinstitute.barclay.argparser.StrictBooleanConverterTest)
Running Test: Test method testBadTaggedArguments[0]([Ljava.lang.String;@3a2259)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[1]([Ljava.lang.String;@1b5e309)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[2]([Ljava.lang.String;@200651)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[3]([Ljava.lang.String;@105a197)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[4]([Ljava.lang.String;@b85fe0)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[5]([Ljava.lang.String;@5fe9b9)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[6]([Ljava.lang.String;@bef25)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[7]([Ljava.lang.String;@5ebc0e)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[8]([Ljava.lang.String;@aa745b)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[9]([Ljava.lang.String;@17e1b48)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[10]([Ljava.lang.String;@25b8a1)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[11]([Ljava.lang.String;@c40f37)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[12]([Ljava.lang.String;@1e19f57)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[13]([Ljava.lang.String;@5e91b7)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[14]([Ljava.lang.String;@16612b3)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[15]([Ljava.lang.String;@1f9e47a)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[16]([Ljava.lang.String;@1c653ce)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[17]([Ljava.lang.String;@594b46)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[18]([Ljava.lang.String;@360358)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[19]([Ljava.lang.String;@18d9a6e)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[20]([Ljava.lang.String;@1ccf5de)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[21]([Ljava.lang.String;@102437)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[22]([Ljava.lang.String;@114f80f)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[23]([Ljava.lang.String;@11e9581)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[24]([Ljava.lang.String;@a63f5a)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[25]([Ljava.lang.String;@41af9d)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[26]([Ljava.lang.String;@b41ec)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[27]([Ljava.lang.String;@77f030)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[28]([Ljava.lang.String;@60560d)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[29]([Ljava.lang.String;@29ec84)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[30]([Ljava.lang.String;@132ff51)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[31]([Ljava.lang.String;@1aeea13)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[32]([Ljava.lang.String;@eebe99)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[33]([Ljava.lang.String;@1d03d3f)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[34]([Ljava.lang.String;@1bb6bcd)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[35]([Ljava.lang.String;@1295c14)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[36]([Ljava.lang.String;@f614b3)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[37]([Ljava.lang.String;@83e0bc)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[38]([Ljava.lang.String;@1454be0)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[39]([Ljava.lang.String;@164b725)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[40]([Ljava.lang.String;@6ca70)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[41]([Ljava.lang.String;@5f8c82)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[42]([Ljava.lang.String;@56e37e)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[43]([Ljava.lang.String;@1f211f3)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[44]([Ljava.lang.String;@13f3d0f)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[45]([Ljava.lang.String;@1d65a5a)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[46]([Ljava.lang.String;@7b4259)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[47]([Ljava.lang.String;@1fdf49d)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[48]([Ljava.lang.String;@12777e8)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[49]([Ljava.lang.String;@1d5a8d4)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[50]([Ljava.lang.String;@18f6c48)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[51]([Ljava.lang.String;@1a2a759)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[52]([Ljava.lang.String;@76ff75)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[53]([Ljava.lang.String;@b45bbd)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[54]([Ljava.lang.String;@1c99e16)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[55]([Ljava.lang.String;@291b48)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[56]([Ljava.lang.String;@41e2b3)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[57]([Ljava.lang.String;@150278c)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[58]([Ljava.lang.String;@15c66e1)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testBadTaggedArguments[59]([Ljava.lang.String;@b52d71)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGetCommandLineTagged[0]([Ljava.lang.String;@1c5a957, TaggableArguments --tFullName:tumor gcs://my/tumor.bam --tScalar:taggableArgScalar foo --scalarArg 17)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGetCommandLineTagged[1]([Ljava.lang.String;@10d3def, TaggableArguments --tFullName:tumor,training=true,truth=false tumor.bam --tFullName:normal,training=false,truth=true normal.bam --tScalar:taggableArgScalar foo --scalarArg 17)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[0]([Ljava.lang.String;@134f4dd, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1167f3c, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1748a1)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[1]([Ljava.lang.String;@87ffb9, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@abb371, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@3f5c51)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[2]([Ljava.lang.String;@1e000ea, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@16e9f9, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1d1c324)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[3]([Ljava.lang.String;@1b0f9c1, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1dfe0b6, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@15d4648)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[4]([Ljava.lang.String;@19f14, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@199542a, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1347cd4)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[5]([Ljava.lang.String;@746fd4, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1497640, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@132a083)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[6]([Ljava.lang.String;@1ef53aa, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@8a7ad3, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@12d0f73)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[7]([Ljava.lang.String;@1fa875f, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@10426e5, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@92b434)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[8]([Ljava.lang.String;@1fc8fbc, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@725cd2, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@62d2bc)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[9]([Ljava.lang.String;@5a55db, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@167d18c, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1b4178e)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[10]([Ljava.lang.String;@1e67730, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@dbfb62, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@5dcae8)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[11]([Ljava.lang.String;@bc261b, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@5dcbfc, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@15391ca)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[12]([Ljava.lang.String;@1d4e905, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@539d26, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1337407)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[13]([Ljava.lang.String;@1b55582, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@11a6134, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1a987fc)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[14]([Ljava.lang.String;@8b3f05, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@de266, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@6fd675)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[15]([Ljava.lang.String;@dc7a9e, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1b96eda, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@116ffd1)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[16]([Ljava.lang.String;@1aef1e4, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@72147f, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@171c7de)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testGoodTaggedArguments[17]([Ljava.lang.String;@19e67ba, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@6509e7, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@36e5d2)(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testMixedTagCollectionArgument(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testMixedTaggedExpansionFile(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testTaggedScalarArgument(org.broadinstitute.barclay.argparser.TaggedArgumentTest)
Running Test: Test method testNonNullDoesNotThrow(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testNonNullThrows(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testNonNullWithMessageReturn(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testNonNullWithMessageThrows(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[0](hello 
hello hello hello hello, hello 
hello hello
hello hello, 12)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[1](hello 
hello hello hello hello, hello 
hello hello
hello hello, 11)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[2](hello 
hello hello hello hello, hello 
hello
hello
hello
hello, 10)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[3](hello 



hello hello hello hello, hello 



hello
hello
hello
hello, 10)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[4](hello 
hello hello hello hello, hello 
hello hello hello
hello, 20)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[5](hello 
hello hello hello hello
, hello 
hello hello hello
hello
, 20)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[6](hello 
hello hello hello hello

, hello 
hello hello hello
hello

, 20)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[7](, , 20)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[8]( , , 20)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[9](
, 
, 20)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[10](null, null, 20)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[11](hello, hello, 0)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[12](hello, hello, -1)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[13](a b c d e f g, a
b
c
d
e
f
g, 1)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[14](a b c d e f g, a
b
c
d
e
f
g, 0)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[15](a b c d e f g, a
b
c
d
e
f
g, -1)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Running Test: Test method testWrapParagraph[16](a b c d e f g, a
b
c
d
e
f
g, -1000)(org.broadinstitute.barclay.utils.UtilsUnitTest)
Gradle Test Executor 1 finished executing tests.
Results: SUCCESS (337 tests, 337 successes, 0 failures, 0 skipped)
Finished generating test XML results (0.128 secs) into: /build/reproducible-path/barclay-5.0.0+dfsg/build/test-results/test
Generating HTML test report...
Finished generating test html results (0.118 secs) into: /build/reproducible-path/barclay-5.0.0+dfsg/build/reports/tests/test
:test (Thread[#29,Daemon worker,5,main]) completed. Took 10.67 secs.

BUILD SUCCESSFUL in 41s
5 actionable tasks: 3 executed, 2 up-to-date
	rm -fr -- /tmp/dh-xdg-rundir-vSGpTwrI
make[1]: Leaving directory '/build/reproducible-path/barclay-5.0.0+dfsg'
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=gradle
   dh_prep -O--buildsystem=gradle
	rm -f -- debian/libbarclay-java.substvars
	rm -fr -- debian/.debhelper/generated/libbarclay-java/ debian/libbarclay-java/ debian/tmp/
   dh_auto_install --destdir=debian/libbarclay-java/ -O--buildsystem=gradle
	install -m0755 -d /build/reproducible-path/barclay-5.0.0\+dfsg/debian/libbarclay-java
   jh_installjavadoc -O--buildsystem=gradle
Duplicate specification "A" for option "A"
Duplicate specification "author|A=s" for option "A"
   dh_installdocs -O--buildsystem=gradle
	install -m0755 -d debian/libbarclay-java/usr/share/doc/libbarclay-java
	install -p -m0644 debian/copyright debian/libbarclay-java/usr/share/doc/libbarclay-java/copyright
   dh_installchangelogs -O--buildsystem=gradle
	install -m0755 -d debian/libbarclay-java/usr/share/doc/libbarclay-java
	install -p -m0644 debian/.debhelper/generated/libbarclay-java/dh_installchangelogs.dch.trimmed debian/libbarclay-java/usr/share/doc/libbarclay-java/changelog.Debian
   dh_installsystemduser -O--buildsystem=gradle
   dh_perl -O--buildsystem=gradle
   dh_link -O--buildsystem=gradle
   jh_installlibs -O--buildsystem=gradle
	install -m0755 -d debian/libbarclay-java/usr/share/java
	install -p -m0644 ./build/libs/barclay-5.0.0.jar debian/libbarclay-java/usr/share/java/barclay-5.0.0.jar
	rm -f debian/libbarclay-java/usr/share/java/barclay.jar
	ln -s barclay-5.0.0.jar debian/libbarclay-java/usr/share/java/barclay.jar
   jh_classpath -O--buildsystem=gradle
	jh_manifest -plibbarclay-java "--classpath=/usr/share/java/commons-lang3.jar /usr/share/java/freemarker.jar /usr/share/java/gson.jar /usr/share/java/joptsimple.jar /usr/share/java/log4j-api.jar" debian/libbarclay-java/usr/share/java/barclay.jar
Duplicate specification "V:s" for option "V"
Duplicate specification "V:s" for option "V"
	Updating symlinked /build/reproducible-path/barclay-5.0.0+dfsg/debian/libbarclay-java/usr/share/java/barclay-5.0.0.jar (via debian/libbarclay-java/usr/share/java/barclay.jar)
	Reading manifest from /build/reproducible-path/barclay-5.0.0+dfsg/debian/libbarclay-java/usr/share/java/barclay-5.0.0.jar
	Updating manifest in /build/reproducible-path/barclay-5.0.0+dfsg/debian/libbarclay-java/usr/share/java/barclay-5.0.0.jar
   jh_manifest -O--buildsystem=gradle
Duplicate specification "V:s" for option "V"
Duplicate specification "V:s" for option "V"
	find debian/libbarclay-java  -name '*.jar'
	Found symlink usr/share/java/barclay.jar
	Found usr/share/java/barclay-5.0.0.jar
	Reading manifest from debian/libbarclay-java/usr/share/java/barclay-5.0.0.jar
	No update of debian/libbarclay-java/usr/share/java/barclay-5.0.0.jar required.
   jh_exec -O--buildsystem=gradle
   jh_depends -O--buildsystem=gradle
Searching /build/reproducible-path/barclay-5.0.0+dfsg/debian/libbarclay-java for libbarclay-java
Searching /build/reproducible-path/barclay-5.0.0+dfsg/debian/libbarclay-java/usr/share/java/barclay-5.0.0.jar
Found Jars: /usr/share/java/commons-lang3.jar /usr/share/java/freemarker.jar /usr/share/java/gson.jar /usr/share/java/joptsimple.jar /usr/share/java/log4j-api.jar
Checking:  /build/reproducible-path/barclay-5.0.0+dfsg/debian/libbarclay-java/usr/share/java/commons-lang3-3.17.0.jar
Checking:  /build/reproducible-path/barclay-5.0.0+dfsg/debian/libbarclay-java/usr/share/java/freemarker-17.jar
Checking:  /build/reproducible-path/barclay-5.0.0+dfsg/debian/libbarclay-java/usr/share/java/gson-2.10.1.jar
Checking:  /build/reproducible-path/barclay-5.0.0+dfsg/debian/libbarclay-java/usr/share/java/joptsimple-5.0.4.jar
Checking:  /build/reproducible-path/barclay-5.0.0+dfsg/debian/libbarclay-java/usr/share/java/log4j-api.jar
Found Debs: libcommons-lang3-java libfreemarker-java libgoogle-gson-java libjoptsimple-java liblog4j2-java
Adding substvars: java:Depends=libcommons-lang3-java,  libfreemarker-java,  libgoogle-gson-java,  libjoptsimple-java,  liblog4j2-java java:Recommends=
   mh_installpoms -O--buildsystem=gradle
	mh_installpom   --package=libbarclay-java            --usj-name=barclay          debian/pom-barclay.xml
	mh_cleanpom   --package=libbarclay-java       --rules=debian/maven.rules      debian/pom-barclay.xml debian/.debhelper/.mh/pom.xml debian/.debhelper/.mh/pom.properties
	mv debian/.debhelper/.mh/pom.xml debian/.debhelper/.mh/barclay-debian.pom
	install -m 644 -D debian/.debhelper/.mh/barclay-5.0.0.pom debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/5.0.0/barclay-5.0.0.pom
	install -m 644 -D debian/.debhelper/.mh/barclay-debian.pom debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/debian/barclay-debian.pom
   mh_linkjars --skip-clean-poms -O--buildsystem=gradle
	mh_linkjar             --package=libbarclay-java    --skip-clean-pom debian/pom-barclay.xml /usr/share/java/barclay.jar
	dh_link   -plibbarclay-java /usr/share/javabarclay.jar usr/share/maven-repo/org/broadinstitute/barclay/5.0.0/barclay-5.0.0.jar
	rm -f debian/libbarclay-java/usr/share/java/barclay.jar
	ln -s barclay-5.0.0.jar debian/libbarclay-java/usr/share/java/barclay.jar
	install -m0755 -d debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/5.0.0
	rm -f debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/5.0.0/barclay-5.0.0.jar
	ln -s ../../../../../java/barclay.jar debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/5.0.0/barclay-5.0.0.jar
	dh_link   -plibbarclay-java /usr/share/javabarclay.jar usr/share/maven-repo/org/broadinstitute/barclay/debian/barclay-debian.jar
	rm -f debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/5.0.0/barclay-5.0.0.jar
	ln -s ../../../../../java/barclay.jar debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/5.0.0/barclay-5.0.0.jar
	rm -f debian/libbarclay-java/usr/share/java/barclay.jar
	ln -s barclay-5.0.0.jar debian/libbarclay-java/usr/share/java/barclay.jar
	install -m0755 -d debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/debian
	rm -f debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/debian/barclay-debian.jar
	ln -s ../../../../../java/barclay.jar debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/debian/barclay-debian.jar
   dh_strip_nondeterminism -O--buildsystem=gradle
	Using 1686519130 as canonical time
	Normalizing debian/libbarclay-java/usr/share/java/barclay-5.0.0.jar using File::StripNondeterminism::handlers::jar
   dh_compress -O--buildsystem=gradle
	cd debian/libbarclay-java
	chmod a-x usr/share/doc/libbarclay-java/changelog.Debian
	gzip -9nf usr/share/doc/libbarclay-java/changelog.Debian
	cd '/build/reproducible-path/barclay-5.0.0+dfsg'
   dh_fixperms -O--buildsystem=gradle
	find debian/libbarclay-java ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/libbarclay-java/usr/share/doc -type f -a -true -a ! -regex 'debian/libbarclay-java/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libbarclay-java/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/libbarclay-java -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
   dh_missing -O--buildsystem=gradle
   dh_installdeb -O--buildsystem=gradle
	install -m0755 -d debian/libbarclay-java/DEBIAN
	rm -f debian/libbarclay-java.debhelper.log
   debian/rules override_dh_gencontrol
make[1]: Entering directory '/build/reproducible-path/barclay-5.0.0+dfsg'
cat debian/control \
| sed -e '/^Build-.*Depends:/,/^[^[:space:]#]/{s/^Build-.*Depends:/ /;p};d' \
| grep '^[[:space:]]' \
| tr ',' '\n' \
> debian/bd-temp-substvars
echo -n "bd:barclay-java=" > debian/bd.substvars
grep 'libbarclay-java ' debian/bd-temp-substvars \
| tr "\n" "," \
| sed -e 's/[[:space:]]\+/ /g;s/,$/\n/' \
>> debian/bd.substvars
dh_gencontrol -O--buildsystem=gradle -- -Tdebian/bd.substvars
	install -m0755 -d debian/libbarclay-java/DEBIAN
	echo misc:Depends= >> debian/libbarclay-java.substvars
	echo misc:Pre-Depends= >> debian/libbarclay-java.substvars
	dpkg-gencontrol -plibbarclay-java -ldebian/changelog -Tdebian/libbarclay-java.substvars -cdebian/control -Pdebian/libbarclay-java -Tdebian/bd.substvars
	chmod 0644 -- debian/libbarclay-java/DEBIAN/control
make[1]: Leaving directory '/build/reproducible-path/barclay-5.0.0+dfsg'
   dh_md5sums -O--buildsystem=gradle
	install -m0755 -d debian/libbarclay-java/DEBIAN
	cd debian/libbarclay-java >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/libbarclay-java/DEBIAN/md5sums
   dh_builddeb -O--buildsystem=gradle
	dpkg-deb --root-owner-group --build debian/libbarclay-java ..
dpkg-deb: building package 'libbarclay-java' in '../libbarclay-java_5.0.0+dfsg-1_all.deb'.
 dpkg-genbuildinfo --build=binary -O../barclay_5.0.0+dfsg-1_armhf.buildinfo
 dpkg-genchanges --build=binary -O../barclay_5.0.0+dfsg-1_armhf.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: including full source code in upload
I: copying local configuration
I: user script /srv/workspace/pbuilder/25729/tmp/hooks/B01_cleanup starting
I: user script /srv/workspace/pbuilder/25729/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/25729 and its subdirectories
I: Current time: Sun Nov 24 04:14:48 +14 2024
I: pbuilder-time-stamp: 1732371288