I: pbuilder: network access will be disabled during build I: Current time: Tue Feb 18 22:28:09 -12 2025 I: pbuilder-time-stamp: 1739960889 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [packmol_20.15.3-1.dsc] I: copying [./packmol_20.15.3.orig.tar.gz] I: copying [./packmol_20.15.3-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./packmol_20.15.3-1.dsc: unsupported subcommand dpkg-source: info: extracting packmol in packmol-20.15.3 dpkg-source: info: unpacking packmol_20.15.3.orig.tar.gz dpkg-source: info: unpacking packmol_20.15.3-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/19550/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='5b996948ec044e5cbd16768f38bd8690' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='19550' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.HIpcjh2d/pbuilderrc_FEsM --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.HIpcjh2d/b1 --logfile b1/build.log packmol_20.15.3-1.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt64b 6.1.0-31-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/19550/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, gfortran dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19523 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-arm-linux-gnueabihf{a} gfortran-arm-linux-gnueabihf{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgfortran-14-dev{a} libgfortran5{a} libgnutls30t64{a} libgssapi-krb5-2{a} libicu72{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 66 newly installed, 0 to remove and 0 not upgraded. Need to get 42.7 MB of archives. After unpacking 149 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf libproc2-0 armhf 2:4.0.4-7 [56.3 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf procps armhf 2:4.0.4-7 [866 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.23.1-1 [238 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-7 [1095 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40.4-4 [84.8 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 12 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 13 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-5 [272 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf automake all 1:1.17-3 [862 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf autopoint all 0.23.1-1 [770 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf cmake-data all 3.31.5-2 [2267 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-6 [9086 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf libarchive13t64 armhf 3.7.4-1.1 [306 kB] Get: 22 http://deb.debian.org/debian unstable/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf libkrb5support0 armhf 1.21.3-4 [30.3 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf libcom-err2 armhf 1.47.2-1 [23.3 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf libk5crypto3 armhf 1.21.3-4 [75.8 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 27 http://deb.debian.org/debian unstable/main armhf libkrb5-3 armhf 1.21.3-4 [285 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf libgssapi-krb5-2 armhf 1.21.3-4 [116 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf libunistring5 armhf 1.3-1 [444 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf libidn2-0 armhf 2.3.7-2+b1 [125 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8+b1 [18.6 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8+b1 [50.6 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf libldap2 armhf 2.6.9+dfsg-1 [167 kB] Get: 34 http://deb.debian.org/debian unstable/main armhf libnghttp2-14 armhf 1.64.0-1 [62.9 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf libnghttp3-9 armhf 1.6.0-2 [56.8 kB] Get: 36 http://deb.debian.org/debian unstable/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB] Get: 37 http://deb.debian.org/debian unstable/main armhf libffi8 armhf 3.4.7-1 [20.3 kB] Get: 38 http://deb.debian.org/debian unstable/main armhf libp11-kit0 armhf 0.25.5-3 [385 kB] Get: 39 http://deb.debian.org/debian unstable/main armhf libtasn1-6 armhf 4.20.0-2 [44.4 kB] Get: 40 http://deb.debian.org/debian unstable/main armhf libgnutls30t64 armhf 3.8.9-2 [1382 kB] Get: 41 http://deb.debian.org/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB] Get: 42 http://deb.debian.org/debian unstable/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB] Get: 43 http://deb.debian.org/debian unstable/main armhf libcurl4t64 armhf 8.12.1-2 [320 kB] Get: 44 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 45 http://deb.debian.org/debian unstable/main armhf libjsoncpp26 armhf 1.9.6-3 [69.9 kB] Get: 46 http://deb.debian.org/debian unstable/main armhf librhash1 armhf 1.4.5-1 [143 kB] Get: 47 http://deb.debian.org/debian unstable/main armhf libuv1t64 armhf 1.50.0-2 [140 kB] Get: 48 http://deb.debian.org/debian unstable/main armhf cmake armhf 3.31.5-2 [5911 kB] Get: 49 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.24.1 [90.9 kB] Get: 50 http://deb.debian.org/debian unstable/main armhf libtool all 2.5.4-3 [539 kB] Get: 51 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 52 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 53 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 55 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 56 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 57 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.23.1-1 [1560 kB] Get: 58 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 59 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 60 http://deb.debian.org/debian unstable/main armhf debhelper all 13.24.1 [920 kB] Get: 61 http://deb.debian.org/debian unstable/main armhf libgfortran5 armhf 14.2.0-17 [263 kB] Get: 62 http://deb.debian.org/debian unstable/main armhf libgfortran-14-dev armhf 14.2.0-17 [315 kB] Get: 63 http://deb.debian.org/debian unstable/main armhf gfortran-14-arm-linux-gnueabihf armhf 14.2.0-17 [8720 kB] Get: 64 http://deb.debian.org/debian unstable/main armhf gfortran-14 armhf 14.2.0-17 [14.0 kB] Get: 65 http://deb.debian.org/debian unstable/main armhf gfortran-arm-linux-gnueabihf armhf 4:14.2.0-1 [1288 B] Get: 66 http://deb.debian.org/debian unstable/main armhf gfortran armhf 4:14.2.0-1 [1428 B] Fetched 42.7 MB in 1s (54.5 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19523 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-7_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-7) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-7_armhf.deb ... Unpacking procps (2:4.0.4-7) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_armhf.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.23.1-1_armhf.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-7_armhf.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.40.4-4_armhf.deb ... Unpacking bsdextrautils (2.40.4-4) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../10-libpipeline1_1.5.8-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.13.0-1_armhf.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-5_armhf.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package cmake-data. Preparing to unpack .../17-cmake-data_3.31.5-2_all.deb ... Unpacking cmake-data (3.31.5-2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../18-libicu72_72.1-6_armhf.deb ... Unpacking libicu72:armhf (72.1-6) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../19-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_armhf.deb ... Unpacking libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package libarchive13t64:armhf. Preparing to unpack .../20-libarchive13t64_3.7.4-1.1_armhf.deb ... Unpacking libarchive13t64:armhf (3.7.4-1.1) ... Selecting previously unselected package libbrotli1:armhf. Preparing to unpack .../21-libbrotli1_1.1.0-2+b6_armhf.deb ... Unpacking libbrotli1:armhf (1.1.0-2+b6) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../22-libkrb5support0_1.21.3-4_armhf.deb ... Unpacking libkrb5support0:armhf (1.21.3-4) ... Selecting previously unselected package libcom-err2:armhf. Preparing to unpack .../23-libcom-err2_1.47.2-1_armhf.deb ... Unpacking libcom-err2:armhf (1.47.2-1) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../24-libk5crypto3_1.21.3-4_armhf.deb ... Unpacking libk5crypto3:armhf (1.21.3-4) ... Selecting previously unselected package libkeyutils1:armhf. Preparing to unpack .../25-libkeyutils1_1.6.3-4_armhf.deb ... Unpacking libkeyutils1:armhf (1.6.3-4) ... Selecting previously unselected package libkrb5-3:armhf. Preparing to unpack .../26-libkrb5-3_1.21.3-4_armhf.deb ... Unpacking libkrb5-3:armhf (1.21.3-4) ... Selecting previously unselected package libgssapi-krb5-2:armhf. Preparing to unpack .../27-libgssapi-krb5-2_1.21.3-4_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.21.3-4) ... Selecting previously unselected package libunistring5:armhf. Preparing to unpack .../28-libunistring5_1.3-1_armhf.deb ... Unpacking libunistring5:armhf (1.3-1) ... Selecting previously unselected package libidn2-0:armhf. Preparing to unpack .../29-libidn2-0_2.3.7-2+b1_armhf.deb ... Unpacking libidn2-0:armhf (2.3.7-2+b1) ... Selecting previously unselected package libsasl2-modules-db:armhf. Preparing to unpack .../30-libsasl2-modules-db_2.1.28+dfsg1-8+b1_armhf.deb ... Unpacking libsasl2-modules-db:armhf (2.1.28+dfsg1-8+b1) ... Selecting previously unselected package libsasl2-2:armhf. Preparing to unpack .../31-libsasl2-2_2.1.28+dfsg1-8+b1_armhf.deb ... Unpacking libsasl2-2:armhf (2.1.28+dfsg1-8+b1) ... Selecting previously unselected package libldap2:armhf. Preparing to unpack .../32-libldap2_2.6.9+dfsg-1_armhf.deb ... Unpacking libldap2:armhf (2.6.9+dfsg-1) ... Selecting previously unselected package libnghttp2-14:armhf. Preparing to unpack .../33-libnghttp2-14_1.64.0-1_armhf.deb ... Unpacking libnghttp2-14:armhf (1.64.0-1) ... Selecting previously unselected package libnghttp3-9:armhf. Preparing to unpack .../34-libnghttp3-9_1.6.0-2_armhf.deb ... Unpacking libnghttp3-9:armhf (1.6.0-2) ... Selecting previously unselected package libpsl5t64:armhf. Preparing to unpack .../35-libpsl5t64_0.21.2-1.1+b1_armhf.deb ... Unpacking libpsl5t64:armhf (0.21.2-1.1+b1) ... Selecting previously unselected package libffi8:armhf. Preparing to unpack .../36-libffi8_3.4.7-1_armhf.deb ... Unpacking libffi8:armhf (3.4.7-1) ... Selecting previously unselected package libp11-kit0:armhf. Preparing to unpack .../37-libp11-kit0_0.25.5-3_armhf.deb ... Unpacking libp11-kit0:armhf (0.25.5-3) ... Selecting previously unselected package libtasn1-6:armhf. 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Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up libarchive13t64:armhf (3.7.4-1.1) ... Setting up gfortran-14-arm-linux-gnueabihf (14.2.0-17) ... Setting up libgnutls30t64:armhf (3.8.9-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpsl5t64:armhf (0.21.2-1.1+b1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-arm-linux-gnueabihf (4:14.2.0-1) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up gfortran-14 (14.2.0-17) ... Setting up libcurl4t64:armhf (8.12.1-2) ... Setting up debhelper (13.24.1) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up cmake (3.31.5-2) ... Processing triggers for libc-bin (2.40-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/packmol-20.15.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../packmol_20.15.3-1_source.changes dpkg-buildpackage: info: source package packmol dpkg-buildpackage: info: source version 1:20.15.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake dh_auto_configure -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The Fortran compiler identification is GNU 14.2.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/f95 - skipped -- Configuring done (0.9s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf dh_auto_build -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/packmol-20.15.3 -B/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend make[3]: Entering directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' cd /build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/packmol-20.15.3 /build/reproducible-path/packmol-20.15.3 /build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf /build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf /build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/DependInfo.cmake "--color=" Dependee "/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/depend.internal". Dependee "/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/depend.internal". Scanning dependencies of target packmol make[3]: Leaving directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/build make[3]: Entering directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' [ 7%] Building Fortran object CMakeFiles/packmol.dir/src/exit_codes.f90.o [ 7%] Building Fortran object CMakeFiles/packmol.dir/src/ahestetic.f90.o [ 7%] Building Fortran object CMakeFiles/packmol.dir/src/sizes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/ahestetic.f90 -o CMakeFiles/packmol.dir/src/ahestetic.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/sizes.f90 -o CMakeFiles/packmol.dir/src/sizes.f90.o 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CMakeFiles/packmol.dir/src/gencan.f.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/gencan.f -o CMakeFiles/packmol.dir/src/gencan.f.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/gencan_ieee_signal_routines.f90 -o CMakeFiles/packmol.dir/src/gencan_ieee_signal_routines.f90.o [ 19%] Building Fortran object CMakeFiles/packmol.dir/src/flashsort.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/flashsort.f90 -o CMakeFiles/packmol.dir/src/flashsort.f90.o [ 21%] Building Fortran object CMakeFiles/packmol.dir/src/jacobi.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/jacobi.f90 -o CMakeFiles/packmol.dir/src/jacobi.f90.o /build/reproducible-path/packmol-20.15.3/src/gencan.f:62:37: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:62:41: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:2571:40: 2571 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:2571:33: 2571 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:2571:12: 2571 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:2570:71: 2570 | +fmin,maxfc,iprint,fcnt,inform,xtrial,d,gamma,sigma1,sigma2,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3805:61: 3805 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3805:54: 3805 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] [ 24%] Building Fortran object CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/random.f90 -o CMakeFiles/packmol.dir/src/random.f90.o /build/reproducible-path/packmol-20.15.3/src/gencan.f:4:36: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:4:40: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:2967:19: 2967 | +epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:5165:19: 5165 | +steabs,inform) | 1 Warning: Unused dummy argument 'inform' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:5164:52: 5164 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:5164:56: 5164 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:5165:12: 5165 | +steabs,inform) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:5164:71: 5164 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:5164:64: 5164 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'xtmp' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.15.3/src/gencan.f:125:25: 125 | subroutine evalhd(n) | 1 Warning: Unused dummy argument 'n' at (1) [-Wunused-dummy-argument] /usr/bin/cmake -E cmake_copy_f90_mod ahestetic.mod CMakeFiles/packmol.dir/ahestetic.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod sizes.mod CMakeFiles/packmol.dir/sizes.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod exit_codes.mod CMakeFiles/packmol.dir/exit_codes.mod.stamp GNU [ 26%] Building Fortran object CMakeFiles/packmol.dir/src/flashmod.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/flashmod.f90 -o CMakeFiles/packmol.dir/src/flashmod.f90.o [ 29%] Building Fortran object CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/input.f90 -o CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/cmake -E cmake_copy_f90_mod pbc.mod CMakeFiles/packmol.dir/pbc.mod.stamp GNU /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/sizes.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod swaptypemod.mod CMakeFiles/packmol.dir/swaptypemod.mod.stamp GNU [ 34%] Building Fortran object CMakeFiles/packmol.dir/src/usegencan.f90.o [ 34%] Building Fortran object CMakeFiles/packmol.dir/src/title.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/title.f90 -o CMakeFiles/packmol.dir/src/title.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/usegencan.f90 -o CMakeFiles/packmol.dir/src/usegencan.f90.o [ 36%] Building Fortran object CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/comparegrad.f90 -o CMakeFiles/packmol.dir/src/comparegrad.f90.o [ 39%] Building Fortran object CMakeFiles/packmol.dir/src/setibox.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/setibox.f90 -o CMakeFiles/packmol.dir/src/setibox.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/ahestetic.f90.o.provides.build [ 41%] Building Fortran object CMakeFiles/packmol.dir/src/compute_data.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/compute_data.f90 -o CMakeFiles/packmol.dir/src/compute_data.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/exit_codes.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod flashsort.mod CMakeFiles/packmol.dir/flashsort.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod input.mod CMakeFiles/packmol.dir/input.mod.stamp GNU /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/pbc.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/swaptypemod.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod usegencan.mod CMakeFiles/packmol.dir/usegencan.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod compute_data.mod CMakeFiles/packmol.dir/compute_data.mod.stamp GNU /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/flashmod.f90.o.provides.build [ 43%] Building Fortran object CMakeFiles/packmol.dir/src/strlength.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/strlength.f90 -o CMakeFiles/packmol.dir/src/strlength.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/input.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/usegencan.f90.o.provides.build [ 46%] Building Fortran object CMakeFiles/packmol.dir/src/cenmass.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/cenmass.f90 -o CMakeFiles/packmol.dir/src/cenmass.f90.o [ 48%] Building Fortran object CMakeFiles/packmol.dir/src/pgencan.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/pgencan.f90 -o CMakeFiles/packmol.dir/src/pgencan.f90.o [ 51%] Building Fortran object CMakeFiles/packmol.dir/src/initial.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/initial.f90 -o CMakeFiles/packmol.dir/src/initial.f90.o [ 53%] Building Fortran object CMakeFiles/packmol.dir/src/setsizes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/setsizes.f90 -o CMakeFiles/packmol.dir/src/setsizes.f90.o /build/reproducible-path/packmol-20.15.3/src/gencan.f:3339:72: 3339 | + beta ** 2 * dnorm2 | ^ Warning: 'alpha' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3221:31: 3221 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'alpha' was declared here /build/reproducible-path/packmol-20.15.3/src/gencan.f:3339:72: 3339 | + beta ** 2 * dnorm2 | ^ Warning: 'dnorm2' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3222:67: 3222 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dnorm2' was declared here /build/reproducible-path/packmol-20.15.3/src/gencan.f:3339:72: 3339 | + beta ** 2 * dnorm2 | ^ Warning: 'dtr' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3222:71: 3222 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dtr' was declared here /build/reproducible-path/packmol-20.15.3/src/gencan.f:3339:72: 3339 | + beta ** 2 * dnorm2 | ^ Warning: 'dtw' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3223:21: 3223 | + dts,dtw,gnorm2,gts,norm2s,q,qamax,qamaxn,qprev,rnorm2, | ^ note: 'dtw' was declared here /build/reproducible-path/packmol-20.15.3/src/gencan.f:3332:72: 3332 | beta = rnorm2 / rnorm2prev | ^ Warning: 'rnorm2prev' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3224:24: 3224 | + rnorm2prev,snorm2,snorm2prev | ^ note: 'rnorm2prev' was declared here /build/reproducible-path/packmol-20.15.3/src/gencan.f:3480:72: 3480 | amax = min( amax1 , amax2 ) | ^ Warning: 'amax1' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3221:42: 3221 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1' was declared here /build/reproducible-path/packmol-20.15.3/src/gencan.f:3481:72: 3481 | amaxn = max( amax1n, amax2n ) | ^ Warning: 'amax1n' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3221:49: 3221 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1n' was declared here /build/reproducible-path/packmol-20.15.3/src/gencan.f:3629:72: 3629 | rbdind = rbdposaind | ^ Warning: 'rbdposaind' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3220:56: 3220 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: 'rbdposaind' was declared here /build/reproducible-path/packmol-20.15.3/src/gencan.f:3636:14: 3636 | if ( rbdtype .eq. 1 ) then | ^ Warning: 'rbdposatype' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:3220:68: 3220 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: 'rbdposatype' was declared here [ 56%] Building Fortran object CMakeFiles/packmol.dir/src/getinp.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/getinp.f90 -o CMakeFiles/packmol.dir/src/getinp.f90.o [ 58%] Building Fortran object CMakeFiles/packmol.dir/src/output.f90.o /build/reproducible-path/packmol-20.15.3/src/gencan.f:2128:72: 2128 | delta = max( delmin, 10.0d0 * sqrt( sts ) ) | ^ Warning: 'sts' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:1677:37: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sts' was declared here /build/reproducible-path/packmol-20.15.3/src/gencan.f:2300:35: 2300 | if ( iter .eq. 1 .or. sty .le. 0.0d0 ) then | ^ Warning: 'sty' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/gencan.f:1677:41: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sty' was declared here /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/output.f90 -o CMakeFiles/packmol.dir/src/output.f90.o /build/reproducible-path/packmol-20.15.3/src/getinp.f90:1005:15: 1005 | if(ires.ne.ireslast) then | ^ Warning: 'ireslast' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/getinp.f90:990:35: 990 | integer :: iread, ires, ireslast, nres, ioerr | ^ note: 'ireslast' was declared here /build/reproducible-path/packmol-20.15.3/src/output.f90:573:36: 573 | nres = ilres - ifres + 1 | ^ Warning: 'ilres' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/src/output.f90:19:46: 19 | irest, iimol, ichain, iatom, irec, ilres, ifres,& | ^ note: 'ilres' was declared here [ 60%] Building Fortran object CMakeFiles/packmol.dir/src/checkpoint.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/checkpoint.f90 -o CMakeFiles/packmol.dir/src/checkpoint.f90.o [ 63%] Building Fortran object CMakeFiles/packmol.dir/src/writesuccess.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/writesuccess.f90 -o CMakeFiles/packmol.dir/src/writesuccess.f90.o [ 65%] Building Fortran object CMakeFiles/packmol.dir/src/fparc.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/fparc.f90 -o CMakeFiles/packmol.dir/src/fparc.f90.o [ 68%] Building Fortran object CMakeFiles/packmol.dir/src/gparc.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/gparc.f90 -o CMakeFiles/packmol.dir/src/gparc.f90.o [ 70%] Building Fortran object CMakeFiles/packmol.dir/src/gwalls.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/gwalls.f90 -o CMakeFiles/packmol.dir/src/gwalls.f90.o [ 73%] Building Fortran object CMakeFiles/packmol.dir/src/comprest.f90.o [ 75%] Building Fortran object CMakeFiles/packmol.dir/app/packmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/comprest.f90 -o CMakeFiles/packmol.dir/src/comprest.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/app/packmol.f90 -o CMakeFiles/packmol.dir/app/packmol.f90.o [ 78%] Building Fortran object CMakeFiles/packmol.dir/src/polartocart.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/polartocart.f90 -o CMakeFiles/packmol.dir/src/polartocart.f90.o [ 80%] Building Fortran object CMakeFiles/packmol.dir/src/resetboxes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/resetboxes.f90 -o CMakeFiles/packmol.dir/src/resetboxes.f90.o [ 82%] Building Fortran object CMakeFiles/packmol.dir/src/tobar.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/tobar.f90 -o CMakeFiles/packmol.dir/src/tobar.f90.o [ 85%] Building Fortran object CMakeFiles/packmol.dir/src/setijk.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/setijk.f90 -o CMakeFiles/packmol.dir/src/setijk.f90.o [ 87%] Building Fortran object CMakeFiles/packmol.dir/src/restmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/restmol.f90 -o CMakeFiles/packmol.dir/src/restmol.f90.o /build/reproducible-path/packmol-20.15.3/app/packmol.f90:347:44: 347 | iratom(icart,iratcount) = iirest | ^ Warning: 'iirest' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.15.3/app/packmol.f90:51:42: 51 | integer :: i, iline, iiatom, iat, iirest, iratcount, ival | ^ note: 'iirest' was declared here [ 90%] Building Fortran object CMakeFiles/packmol.dir/src/swaptype.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/swaptype.f90 -o CMakeFiles/packmol.dir/src/swaptype.f90.o [ 92%] Building Fortran object CMakeFiles/packmol.dir/src/heuristics.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/heuristics.f90 -o CMakeFiles/packmol.dir/src/heuristics.f90.o [ 95%] Building Fortran object CMakeFiles/packmol.dir/src/computef.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/computef.f90 -o CMakeFiles/packmol.dir/src/computef.f90.o [ 97%] Building Fortran object CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.15.3/src/computeg.f90 -o CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/compute_data.f90.o.provides.build [100%] Linking Fortran executable packmol /usr/bin/cmake -E cmake_link_script CMakeFiles/packmol.dir/link.txt --verbose=1 /usr/bin/f95 -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/packmol.dir/link.d -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.15.3=. -fstack-protector-strong -fstack-clash-protection CMakeFiles/packmol.dir/src/exit_codes.f90.o CMakeFiles/packmol.dir/src/cenmass.f90.o CMakeFiles/packmol.dir/src/gencan.f.o CMakeFiles/packmol.dir/src/gencan_ieee_signal_routines.f90.o CMakeFiles/packmol.dir/src/pgencan.f90.o CMakeFiles/packmol.dir/src/initial.f90.o CMakeFiles/packmol.dir/src/title.f90.o CMakeFiles/packmol.dir/src/setsizes.f90.o CMakeFiles/packmol.dir/src/getinp.f90.o CMakeFiles/packmol.dir/src/strlength.f90.o CMakeFiles/packmol.dir/src/output.f90.o CMakeFiles/packmol.dir/src/checkpoint.f90.o CMakeFiles/packmol.dir/src/writesuccess.f90.o CMakeFiles/packmol.dir/src/fparc.f90.o CMakeFiles/packmol.dir/src/gparc.f90.o CMakeFiles/packmol.dir/src/gwalls.f90.o CMakeFiles/packmol.dir/src/comprest.f90.o CMakeFiles/packmol.dir/src/comparegrad.f90.o CMakeFiles/packmol.dir/app/packmol.f90.o CMakeFiles/packmol.dir/src/polartocart.f90.o CMakeFiles/packmol.dir/src/resetboxes.f90.o CMakeFiles/packmol.dir/src/tobar.f90.o CMakeFiles/packmol.dir/src/setijk.f90.o CMakeFiles/packmol.dir/src/setibox.f90.o CMakeFiles/packmol.dir/src/restmol.f90.o CMakeFiles/packmol.dir/src/swaptype.f90.o CMakeFiles/packmol.dir/src/swaptypemod.f90.o CMakeFiles/packmol.dir/src/ahestetic.f90.o CMakeFiles/packmol.dir/src/heuristics.f90.o CMakeFiles/packmol.dir/src/flashsort.f90.o CMakeFiles/packmol.dir/src/jacobi.f90.o CMakeFiles/packmol.dir/src/random.f90.o CMakeFiles/packmol.dir/src/sizes.f90.o CMakeFiles/packmol.dir/src/pbc.f90.o CMakeFiles/packmol.dir/src/usegencan.f90.o CMakeFiles/packmol.dir/src/compute_data.f90.o CMakeFiles/packmol.dir/src/flashmod.f90.o CMakeFiles/packmol.dir/src/computef.f90.o CMakeFiles/packmol.dir/src/computeg.f90.o CMakeFiles/packmol.dir/src/input.f90.o -o packmol make[3]: Leaving directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' [100%] Built target packmol make[2]: Leaving directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' dh_auto_test -O--buildsystem=cmake create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install --destdir=debian/packmol/ -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/packmol-20.15.3/debian/packmol AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/packmol-20.15.3 -B/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/packmol-20.15.3/debian/packmol/usr/bin/packmol make[1]: Leaving directory '/build/reproducible-path/packmol-20.15.3/obj-arm-linux-gnueabihf' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'packmol' in '../packmol_20.15.3-1_armhf.deb'. dpkg-deb: building package 'packmol-dbgsym' in '../packmol-dbgsym_20.15.3-1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../packmol_20.15.3-1_armhf.buildinfo dpkg-genchanges --build=binary -O../packmol_20.15.3-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/19550 and its subdirectories I: Current time: Tue Feb 18 22:29:53 -12 2025 I: pbuilder-time-stamp: 1739960993