I: pbuilder: network access will be disabled during build I: Current time: Sat Jan 31 08:56:53 +14 2026 I: pbuilder-time-stamp: 1769799413 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [bppsuite_2.4.1-7.dsc] I: copying [./bppsuite_2.4.1.orig.tar.gz] I: copying [./bppsuite_2.4.1-7.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./bppsuite_2.4.1-7.dsc: unsupported subcommand dpkg-source: info: extracting bppsuite in bppsuite-2.4.1 dpkg-source: info: unpacking bppsuite_2.4.1.orig.tar.gz dpkg-source: info: unpacking bppsuite_2.4.1-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling dpkg-source: info: applying hardening I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2773/tmp/hooks/D01_modify_environment starting debug: Running on ionos6-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jan 30 18:57 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2773/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2773/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=21 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=8aa379936f4e486c9a2f8be978f706f3 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2773 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.t5QxTwOp/pbuilderrc_1Z33 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.t5QxTwOp/b2 --logfile b2/build.log bppsuite_2.4.1-7.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2773/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org> Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, texinfo, libbpp-phyl-dev, libbpp-popgen-dev, libeigen3-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19844 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on texinfo; however: Package texinfo is not installed. pbuilder-satisfydepends-dummy depends on libbpp-phyl-dev; however: Package libbpp-phyl-dev is not installed. pbuilder-satisfydepends-dummy depends on libbpp-popgen-dev; however: Package libbpp-popgen-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbpp-core-dev{a} libbpp-core4t64{a} libbpp-phyl-dev{a} libbpp-phyl12t64{a} libbpp-popgen-dev{a} libbpp-popgen8t64{a} libbpp-seq-dev{a} libbpp-seq12t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libeigen3-dev{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libicu72{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libp11-kit0{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtext-unidecode-perl{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml-libxml-perl{a} libxml-namespacesupport-perl{a} libxml-sax-base-perl{a} libxml-sax-perl{a} libxml2{a} m4{a} man-db{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} sensible-utils{a} tex-common{a} texinfo{a} texinfo-lib{a} ucf{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules libwww-perl libxml-sax-expat-perl linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 81 newly installed, 0 to remove and 0 not upgraded. Need to get 54.2 MB of archives. After unpacking 232 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-6 [65.7 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-6 [876 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.22.5-3 [201 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.2-13 [95.9 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 ucf all 3.0046 [41.1 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-4 [293 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 autopoint all 0.22.5-3 [723 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 cmake-data all 3.31.2-1 [2267 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 libarchive13t64 i386 3.7.4-1.1 [390 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b6 [308 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.2~rc1-2 [24.0 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 28 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-1 [458 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 libidn2-0 i386 2.3.7-2+b1 [130 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.6-1 [21.2 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 libp11-kit0 i386 0.25.5-3 [423 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 libtasn1-6 i386 4.19.0-3+b3 [51.1 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 libgnutls30t64 i386 3.8.8-2 [1451 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-8 [20.6 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-8 [61.0 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libldap-2.5-0 i386 2.5.19+dfsg-1 [200 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libpsl5t64 i386 0.21.2-1.1+b1 [57.7 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b5 [62.4 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libssh2-1t64 i386 1.11.1-1 [256 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libcurl4t64 i386 8.11.1-1 [393 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libjsoncpp26 i386 1.9.6-3 [90.0 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 librhash1 i386 1.4.5-1 [144 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 libuv1t64 i386 1.48.0-7 [157 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 cmake i386 3.31.2-1 [13.1 MB] Get: 49 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.22 [90.5 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 libtool all 2.4.7-8 [517 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 55 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 gettext i386 0.22.5-3 [1631 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 debhelper all 13.22 [919 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libbpp-core4t64 i386 2.4.1-13+b1 [664 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 libbpp-core-dev i386 2.4.1-13+b1 [1008 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libbpp-seq12t64 i386 2.4.1-13 [540 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libbpp-phyl12t64 i386 2.4.1-11+b1 [1781 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libbpp-seq-dev i386 2.4.1-13 [784 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 libbpp-phyl-dev i386 2.4.1-11+b1 [3115 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 libbpp-popgen8t64 i386 2.4.1-11+b1 [263 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 libbpp-popgen-dev i386 2.4.1-11+b1 [334 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libpkgconf3 i386 1.8.1-4 [38.4 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 pkgconf-bin i386 1.8.1-4 [30.6 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 pkgconf i386 1.8.1-4 [26.2 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 pkg-config i386 1.8.1-4 [14.0 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libtext-unidecode-perl all 1.30-3 [101 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libxml-libxml-perl i386 2.0207+dfsg+really+2.0134-5+b1 [324 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 tex-common all 6.18 [32.5 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 texinfo-lib i386 7.1.1-1+b1 [236 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 texinfo all 7.1.1-1 [1753 kB] Fetched 54.2 MB in 1s (42.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19844 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-6_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-6_i386.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.22.5-3_i386.deb ... Unpacking gettext-base (0.22.5-3) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.40.2-13_i386.deb ... Unpacking bsdextrautils (2.40.2-13) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../10-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package ucf. Preparing to unpack .../12-ucf_3.0046_all.deb ... Moving old data out of the way Unpacking ucf (3.0046) ... Selecting previously unselected package m4. Preparing to unpack .../13-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../14-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../15-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../16-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../17-autopoint_0.22.5-3_all.deb ... Unpacking autopoint (0.22.5-3) ... Selecting previously unselected package cmake-data. Preparing to unpack .../18-cmake-data_3.31.2-1_all.deb ... Unpacking cmake-data (3.31.2-1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../19-libicu72_72.1-5+b1_i386.deb ... Unpacking libicu72:i386 (72.1-5+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../20-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package libarchive13t64:i386. Preparing to unpack .../21-libarchive13t64_3.7.4-1.1_i386.deb ... Unpacking libarchive13t64:i386 (3.7.4-1.1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../22-libbrotli1_1.1.0-2+b6_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b6) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../23-libkrb5support0_1.21.3-3_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-3) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../24-libcom-err2_1.47.2~rc1-2_i386.deb ... Unpacking libcom-err2:i386 (1.47.2~rc1-2) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../25-libk5crypto3_1.21.3-3_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../26-libkeyutils1_1.6.3-4_i386.deb ... 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Unpacking libbpp-popgen-dev:i386 (2.4.1-11+b1) ... Selecting previously unselected package libpkgconf3:i386. Preparing to unpack .../68-libpkgconf3_1.8.1-4_i386.deb ... Unpacking libpkgconf3:i386 (1.8.1-4) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../69-pkgconf-bin_1.8.1-4_i386.deb ... Unpacking pkgconf-bin (1.8.1-4) ... Selecting previously unselected package pkgconf:i386. Preparing to unpack .../70-pkgconf_1.8.1-4_i386.deb ... Unpacking pkgconf:i386 (1.8.1-4) ... Selecting previously unselected package pkg-config:i386. Preparing to unpack .../71-pkg-config_1.8.1-4_i386.deb ... Unpacking pkg-config:i386 (1.8.1-4) ... Selecting previously unselected package libeigen3-dev. Preparing to unpack .../72-libeigen3-dev_3.4.0-4_all.deb ... Unpacking libeigen3-dev (3.4.0-4) ... Selecting previously unselected package libtext-unidecode-perl. Preparing to unpack .../73-libtext-unidecode-perl_1.30-3_all.deb ... Unpacking libtext-unidecode-perl (1.30-3) ... 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Setting up file (1:5.45-3+b1) ... Setting up texinfo-lib (7.1.1-1+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg1-8) ... Setting up libbpp-core-dev:i386 (2.4.1-13+b1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up autotools-dev (20220109.1) ... Setting up libpkgconf3:i386 (1.8.1-4) ... Setting up libjsoncpp26:i386 (1.9.6-3) ... Setting up libproc2-0:i386 (2:4.0.4-6) ... Setting up libunistring5:i386 (1.3-1) ... Setting up autopoint (0.22.5-3) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libk5crypto3:i386 (1.21.3-3) ... Setting up libsasl2-2:i386 (2.1.28+dfsg1-8) ... Setting up autoconf (2.72-3) ... Setting up libffi8:i386 (3.4.6-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up libtasn1-6:i386 (4.19.0-3+b3) ... Setting up cmake-data (3.31.2-1) ... Setting up librhash1:i386 (1.4.5-1) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up libssh2-1t64:i386 (1.11.1-1) ... Setting up libtext-unidecode-perl (1.30-3) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libbpp-seq12t64:i386 (2.4.1-13) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libbpp-seq-dev:i386 (2.4.1-13) ... Setting up gettext (0.22.5-3) ... Setting up libtool (2.4.7-8) ... Setting up libbpp-phyl12t64:i386 (2.4.1-11+b1) ... Setting up libidn2-0:i386 (2.3.7-2+b1) ... Setting up libbpp-popgen8t64:i386 (2.4.1-11+b1) ... Setting up pkgconf:i386 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libbpp-phyl-dev:i386 (2.4.1-11+b1) ... Setting up libp11-kit0:i386 (0.25.5-3) ... Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up pkg-config:i386 (1.8.1-4) ... Setting up ucf (3.0046) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-7) ... Setting up libarchive13t64:i386 (3.7.4-1.1) ... Setting up libgnutls30t64:i386 (3.8.8-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libbpp-popgen-dev:i386 (2.4.1-11+b1) ... Setting up libpsl5t64:i386 (0.21.2-1.1+b1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libldap-2.5-0:i386 (2.5.19+dfsg-1) ... Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libcurl4t64:i386 (8.11.1-1) ... Setting up debhelper (13.22) ... Setting up texinfo (7.1.1-1) ... Setting up cmake (3.31.2-1) ... Processing triggers for libc-bin (2.40-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2773/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/2773/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/bppsuite-2.4.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../bppsuite_2.4.1-7_source.changes dpkg-buildpackage: info: source package bppsuite dpkg-buildpackage: info: source version 2.4.1-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org> dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu .. CMake Deprecation Warning at CMakeLists.txt:7 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument <min> value. Or, use the <min>...<max> syntax to tell CMake that the project requires at least <min> but has been updated to work with policies introduced by <max> or earlier. -- The CXX compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found /usr/bin/gzip compression program, using file extension .gz -- bpp-core 4.1.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-core.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-core.so.4.1.0 -- includes: /usr/include -- bpp-seq 12.0.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-seq.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-seq.so.12.0.0 -- includes: /usr/include -- bpp-phyl 12.0.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-phyl.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-phyl.so.12.0.0 -- includes: /usr/include -- bpp-popgen 8.0.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-popgen.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-popgen.so.8.0.0 -- includes: /usr/include -- Found /usr/bin/makeinfo: 'info' and 'html' target enabled (builds info/html doc) -- Found texi2dvi: 'pdf' target enabled (builds pdf doc) -- Configuring done (0.3s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu dh_auto_build cd obj-i686-linux-gnu && make -j21 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/bppsuite-2.4.1 -B/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bppml.dir/build.make bppSuite/CMakeFiles/bppml.dir/depend make -f bppSuite/CMakeFiles/bppseqgen.dir/build.make bppSuite/CMakeFiles/bppseqgen.dir/depend make -f bppSuite/CMakeFiles/bppdist.dir/build.make bppSuite/CMakeFiles/bppdist.dir/depend make -f bppSuite/CMakeFiles/bpppars.dir/build.make bppSuite/CMakeFiles/bpppars.dir/depend make -f bppSuite/CMakeFiles/bppseqman.dir/build.make bppSuite/CMakeFiles/bppseqman.dir/depend make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bppml.dir/DependInfo.cmake "--color=" make -f bppSuite/CMakeFiles/bppconsense.dir/build.make bppSuite/CMakeFiles/bppconsense.dir/depend make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bppseqgen.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bppdist.dir/DependInfo.cmake "--color=" make -f bppSuite/CMakeFiles/bppancestor.dir/build.make bppSuite/CMakeFiles/bppancestor.dir/depend make -f bppSuite/CMakeFiles/bppmixedlikelihoods.dir/build.make bppSuite/CMakeFiles/bppmixedlikelihoods.dir/depend make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bpppars.dir/DependInfo.cmake "--color=" make -f bppSuite/CMakeFiles/bppreroot.dir/build.make bppSuite/CMakeFiles/bppreroot.dir/depend make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bppseqman.dir/DependInfo.cmake "--color=" make -f bppSuite/CMakeFiles/bpptreedraw.dir/build.make bppSuite/CMakeFiles/bpptreedraw.dir/depend make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bppconsense.dir/DependInfo.cmake "--color=" make -f bppSuite/CMakeFiles/bppalnscore.dir/build.make bppSuite/CMakeFiles/bppalnscore.dir/depend make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bppancestor.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bpppopstats.dir/build.make bppSuite/CMakeFiles/bpppopstats.dir/depend cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bppmixedlikelihoods.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bppreroot.dir/DependInfo.cmake "--color=" make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/depend make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bpptreedraw.dir/DependInfo.cmake "--color=" make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/depend make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bpppopstats.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite/CMakeFiles/bppalnscore.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/man /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/CMakeFiles/man.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bppsuite-2.4.1 /build/reproducible-path/bppsuite-2.4.1/doc /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/doc /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/doc/CMakeFiles/info.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bppdist.dir/build.make bppSuite/CMakeFiles/bppdist.dir/build make -f bppSuite/CMakeFiles/bpppars.dir/build.make bppSuite/CMakeFiles/bpppars.dir/build make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bppconsense.dir/build.make bppSuite/CMakeFiles/bppconsense.dir/build make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bppml.dir/build.make bppSuite/CMakeFiles/bppml.dir/build make -f bppSuite/CMakeFiles/bppseqman.dir/build.make bppSuite/CMakeFiles/bppseqman.dir/build make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bppancestor.dir/build.make bppSuite/CMakeFiles/bppancestor.dir/build make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bppreroot.dir/build.make bppSuite/CMakeFiles/bppreroot.dir/build make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bpppopstats.dir/build.make bppSuite/CMakeFiles/bpppopstats.dir/build make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bppalnscore.dir/build.make bppSuite/CMakeFiles/bppalnscore.dir/build make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/build make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bppseqgen.dir/build.make bppSuite/CMakeFiles/bppseqgen.dir/build make -f bppSuite/CMakeFiles/bppmixedlikelihoods.dir/build.make bppSuite/CMakeFiles/bppmixedlikelihoods.dir/build make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f bppSuite/CMakeFiles/bpptreedraw.dir/build.make bppSuite/CMakeFiles/bpptreedraw.dir/build make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/build make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' [ 2%] Building CXX object bppSuite/CMakeFiles/bppdist.dir/bppDist.cpp.o [ 5%] Building CXX object bppSuite/CMakeFiles/bpppars.dir/bppPars.cpp.o [ 7%] Building CXX object bppSuite/CMakeFiles/bppml.dir/bppML.cpp.o cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT bppSuite/CMakeFiles/bppdist.dir/bppDist.cpp.o -MF CMakeFiles/bppdist.dir/bppDist.cpp.o.d -o CMakeFiles/bppdist.dir/bppDist.cpp.o -c /build/reproducible-path/bppsuite-2.4.1/bppSuite/bppDist.cpp [ 10%] Building CXX object bppSuite/CMakeFiles/bppconsense.dir/bppConsense.cpp.o [ 15%] Building CXX object bppSuite/CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o [ 15%] Building CXX object bppSuite/CMakeFiles/bppancestor.dir/bppAncestor.cpp.o [ 18%] Generating info page cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT bppSuite/CMakeFiles/bppml.dir/bppML.cpp.o -MF CMakeFiles/bppml.dir/bppML.cpp.o.d -o CMakeFiles/bppml.dir/bppML.cpp.o -c /build/reproducible-path/bppsuite-2.4.1/bppSuite/bppML.cpp cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT bppSuite/CMakeFiles/bpppars.dir/bppPars.cpp.o -MF CMakeFiles/bpppars.dir/bppPars.cpp.o.d -o CMakeFiles/bpppars.dir/bppPars.cpp.o -c /build/reproducible-path/bppsuite-2.4.1/bppSuite/bppPars.cpp [ 21%] Building CXX object bppSuite/CMakeFiles/bppreroot.dir/bppReRoot.cpp.o cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT bppSuite/CMakeFiles/bppconsense.dir/bppConsense.cpp.o -MF CMakeFiles/bppconsense.dir/bppConsense.cpp.o.d -o CMakeFiles/bppconsense.dir/bppConsense.cpp.o -c /build/reproducible-path/bppsuite-2.4.1/bppSuite/bppConsense.cpp cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE 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/build/reproducible-path/bppsuite-2.4.1/bppSuite/bppAncestor.cpp [ 23%] Building CXX object bppSuite/CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT bppSuite/CMakeFiles/bppreroot.dir/bppReRoot.cpp.o -MF CMakeFiles/bppreroot.dir/bppReRoot.cpp.o.d -o CMakeFiles/bppreroot.dir/bppReRoot.cpp.o -c /build/reproducible-path/bppsuite-2.4.1/bppSuite/bppReRoot.cpp cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT bppSuite/CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o -MF CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o.d -o CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o -c /build/reproducible-path/bppsuite-2.4.1/bppSuite/bppSeqMan.cpp [ 26%] Building CXX object bppSuite/CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT bppSuite/CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o -MF CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o.d -o CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o -c /build/reproducible-path/bppsuite-2.4.1/bppSuite/bppAlnScore.cpp [ 28%] Building CXX object bppSuite/CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o [ 31%] Building CXX object bppSuite/CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT bppSuite/CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o -MF CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o.d -o CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o -c /build/reproducible-path/bppsuite-2.4.1/bppSuite/bppSeqGen.cpp [ 34%] Building CXX object bppSuite/CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o [ 36%] Compressing manpage bppancestor.1 cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT bppSuite/CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o -MF CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o.d -o CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o -c /build/reproducible-path/bppsuite-2.4.1/bppSuite/bppMixedLikelihoods.cpp cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -MD -MT bppSuite/CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o -MF CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o.d -o CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o -c /build/reproducible-path/bppsuite-2.4.1/bppSuite/bppTreeDraw.cpp [ 39%] Compressing manpage bppalnscore.1 [ 42%] Compressing manpage bpppars.1 cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bppancestor.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bppancestor.1.gz [ 44%] Compressing manpage bppdist.1 cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bppalnscore.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bppalnscore.1.gz cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bpppars.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bpppars.1.gz [ 47%] Compressing manpage bppconsense.1 cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bppdist.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bppdist.1.gz [ 50%] Compressing manpage bppml.1 [ 55%] Compressing manpage bpppopstats.1 [ 55%] Compressing manpage bppmixedlikelihoods.1 cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bppconsense.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bppconsense.1.gz cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bppmixedlikelihoods.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bppmixedlikelihoods.1.gz cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bppml.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bppml.1.gz cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bpppopstats.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bpppopstats.1.gz [ 60%] Compressing manpage bppreroot.1 [ 60%] Compressing manpage bppseqgen.1 [ 63%] Compressing manpage bppseqman.1 cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bppseqgen.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bppseqgen.1.gz cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bppreroot.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bppreroot.1.gz [ 65%] Compressing manpage bpptreedraw.1 cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bppseqman.1 > /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man/bppseqman.1.gz cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/man && /usr/bin/gzip -c -n -9 /build/reproducible-path/bppsuite-2.4.1/man/bpptreedraw.1 > 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'/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' [ 76%] Built target bppconsense [ 78%] Linking CXX executable bpptreedraw cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpptreedraw.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/bpptreedraw.dir/link.d CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o -o bpptreedraw /usr/lib/i386-linux-gnu/libbpp-phyl.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-popgen.so.8.0.0 /usr/lib/i386-linux-gnu/libbpp-seq.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' [ 78%] Built target bpptreedraw [ 81%] Linking CXX executable bppreroot cd 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/usr/lib/i386-linux-gnu/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' [ 92%] Built target bppancestor [ 94%] Linking CXX executable bppdist cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppdist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/bppdist.dir/link.d CMakeFiles/bppdist.dir/bppDist.cpp.o -o bppdist /usr/lib/i386-linux-gnu/libbpp-phyl.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-popgen.so.8.0.0 /usr/lib/i386-linux-gnu/libbpp-seq.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' [ 94%] Built target bppdist [ 97%] Linking CXX executable bppml cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppml.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/bppml.dir/link.d CMakeFiles/bppml.dir/bppML.cpp.o -o bppml /usr/lib/i386-linux-gnu/libbpp-phyl.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-popgen.so.8.0.0 /usr/lib/i386-linux-gnu/libbpp-seq.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' [ 97%] Built target bppml [100%] Linking CXX executable bpppopstats cd /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpppopstats.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/bppsuite-2.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic -Wl,--dependency-file=CMakeFiles/bpppopstats.dir/link.d CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o -o bpppopstats /usr/lib/i386-linux-gnu/libbpp-phyl.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-popgen.so.8.0.0 /usr/lib/i386-linux-gnu/libbpp-seq.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' [100%] Built target bpppopstats make[2]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-i686-linux-gnu && make -j21 install DESTDIR=/build/reproducible-path/bppsuite-2.4.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/bppsuite-2.4.1 -B/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bppml -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bppseqgen -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bppdist -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bpppars -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bppseqman -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bppconsense -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bppancestor -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bppmixedlikelihoods -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bppreroot -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bpptreedraw -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bppalnscore -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/bin/bpppopstats -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/info/bppsuite.info.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bppalnscore.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bppancestor.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bppconsense.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bppdist.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bppmixedlikelihoods.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bppml.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bpppars.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bpppopstats.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bppreroot.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bppseqgen.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bppseqman.1.gz -- Installing: /build/reproducible-path/bppsuite-2.4.1/debian/tmp/usr/share/man/man1/bpptreedraw.1.gz make[1]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1/obj-i686-linux-gnu' dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms debian/rules execute_after_dh_fixperms make[1]: Entering directory '/build/reproducible-path/bppsuite-2.4.1' find debian -name "*.dnd" -exec chmod -x \{\} \; make[1]: Leaving directory '/build/reproducible-path/bppsuite-2.4.1' dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'bppsuite' in '../bppsuite_2.4.1-7_i386.deb'. dpkg-deb: building package 'bppsuite-dbgsym' in '../bppsuite-dbgsym_2.4.1-7_i386.deb'. dpkg-deb: building package 'bppsuite-examples' in '../bppsuite-examples_2.4.1-7_all.deb'. dpkg-genbuildinfo --build=binary -O../bppsuite_2.4.1-7_i386.buildinfo dpkg-genchanges --build=binary -O../bppsuite_2.4.1-7_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2773/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2773/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2773 and its subdirectories I: Current time: Sat Jan 31 08:57:44 +14 2026 I: pbuilder-time-stamp: 1769799464