I: pbuilder: network access will be disabled during build
I: Current time: Mon Feb 24 08:53:11 -12 2025
I: pbuilder-time-stamp: 1740430391
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: using eatmydata during job
I: Copying source file
I: copying [cyvcf2_0.31.1-2.dsc]
I: copying [./cyvcf2_0.31.1.orig.tar.gz]
I: copying [./cyvcf2_0.31.1-2.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./cyvcf2_0.31.1-2.dsc: unsupported subcommand
dpkg-source: info: extracting cyvcf2 in cyvcf2-0.31.1
dpkg-source: info: unpacking cyvcf2_0.31.1.orig.tar.gz
dpkg-source: info: unpacking cyvcf2_0.31.1-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying i386.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/57801/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='i386'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 '
DISTRIBUTION='unstable'
HOME='/root'
HOST_ARCH='i386'
IFS='
'
INVOCATION_ID='248be58096c2478993ebcde849045c55'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
LD_LIBRARY_PATH='/usr/lib/libeatmydata'
LD_PRELOAD='libeatmydata.so'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='57801'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lMEKgwvq/pbuilderrc_M5jb --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lMEKgwvq/b1 --logfile b1/build.log cyvcf2_0.31.1-2.dsc'
SUDO_GID='112'
SUDO_UID='107'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://46.16.76.132:3128'
I: uname -a
Linux ionos2-i386 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/57801/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: i386
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-sequence-python3, zlib1g-dev, cython3, python3-setuptools, python3-all-dev, python3-numpy, python3-coloredlogs, python3-click, python3-pytest, libssl-dev, libcurl4-gnutls-dev | libcurl4-openssl-dev, libhts-dev, libbz2-dev, help2man
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19761 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however:
Package dh-sequence-python3 is not installed.
pbuilder-satisfydepends-dummy depends on zlib1g-dev; however:
Package zlib1g-dev is not installed.
pbuilder-satisfydepends-dummy depends on cython3; however:
Package cython3 is not installed.
pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
Package python3-setuptools is not installed.
pbuilder-satisfydepends-dummy depends on python3-all-dev; however:
Package python3-all-dev is not installed.
pbuilder-satisfydepends-dummy depends on python3-numpy; however:
Package python3-numpy is not installed.
pbuilder-satisfydepends-dummy depends on python3-coloredlogs; however:
Package python3-coloredlogs is not installed.
pbuilder-satisfydepends-dummy depends on python3-click; however:
Package python3-click is not installed.
pbuilder-satisfydepends-dummy depends on python3-pytest; however:
Package python3-pytest is not installed.
pbuilder-satisfydepends-dummy depends on libssl-dev; however:
Package libssl-dev is not installed.
pbuilder-satisfydepends-dummy depends on libcurl4-gnutls-dev | libcurl4-openssl-dev; however:
Package libcurl4-gnutls-dev is not installed.
Package libcurl4-openssl-dev is not installed.
pbuilder-satisfydepends-dummy depends on libhts-dev; however:
Package libhts-dev is not installed.
pbuilder-satisfydepends-dummy depends on libbz2-dev; however:
Package libbz2-dev is not installed.
pbuilder-satisfydepends-dummy depends on help2man; however:
Package help2man is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} comerr-dev{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} krb5-multidev{a} libarchive-zip-perl{a} libblas3{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libelf1t64{a} libevent-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgnutls30t64{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libhts-dev{a} libhts3t64{a} libhtscodecs2{a} libicu72{a} libidn2-0{a} libidn2-dev{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblapack3{a} libldap-dev{a} libldap2{a} liblocale-gettext-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp2-dev{a} libnghttp3-9{a} libnghttp3-dev{a} libngtcp2-16{a} libngtcp2-crypto-gnutls-dev{a} libngtcp2-crypto-gnutls8{a} libngtcp2-dev{a} libnsl2{a} libp11-kit-dev{a} libp11-kit0{a} libpipeline1{a} libpkgconf3{a} libpsl-dev{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libtasn1-6{a} libtasn1-6-dev{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libunbound8{a} libunistring5{a} libxml2{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} netbase{a} nettle-dev{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python3{a} python3-all{a} python3-all-dev{a} python3-autocommand{a} python3-click{a} python3-coloredlogs{a} python3-dev{a} python3-humanfriendly{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pytest{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a}
The following packages are RECOMMENDED but will NOT be installed:
bzip2-doc ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules libtasn1-doc lynx publicsuffix python3-pygments wget
0 packages upgraded, 156 newly installed, 0 to remove and 0 not upgraded.
Need to get 85.6 MB of archives. After unpacking 336 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main i386 liblocale-gettext-perl i386 1.07-7+b1 [15.4 kB]
Get: 2 http://deb.debian.org/debian unstable/main i386 libpython3.13-minimal i386 3.13.2-1 [859 kB]
Get: 3 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.4-1 [107 kB]
Get: 4 http://deb.debian.org/debian unstable/main i386 python3.13-minimal i386 3.13.2-1 [2266 kB]
Get: 5 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.13.1-2 [27.0 kB]
Get: 6 http://deb.debian.org/debian unstable/main i386 media-types all 12.0.0 [28.9 kB]
Get: 7 http://deb.debian.org/debian unstable/main i386 netbase all 6.4 [12.8 kB]
Get: 8 http://deb.debian.org/debian unstable/main i386 tzdata all 2025a-2 [259 kB]
Get: 9 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.7-1 [21.4 kB]
Get: 10 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-6 [69.4 kB]
Get: 11 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-6 [173 kB]
Get: 12 http://deb.debian.org/debian unstable/main i386 libpython3.13-stdlib i386 3.13.2-1 [1985 kB]
Get: 13 http://deb.debian.org/debian unstable/main i386 python3.13 i386 3.13.2-1 [745 kB]
Get: 14 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.13.1-2 [9952 B]
Get: 15 http://deb.debian.org/debian unstable/main i386 python3 i386 3.13.1-2 [28.0 kB]
Get: 16 http://deb.debian.org/debian unstable/main i386 python3-numpy-dev i386 1:2.2.3+ds-2 [145 kB]
Get: 17 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.1-2 [150 kB]
Get: 18 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14.2.0-17 [735 kB]
Get: 19 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.1-2 [2198 kB]
Get: 20 http://deb.debian.org/debian unstable/main i386 python3-numpy i386 1:2.2.3+ds-2 [7542 kB]
Get: 21 http://deb.debian.org/debian unstable/main i386 libpython3.12-minimal i386 3.12.9-1 [816 kB]
Get: 22 http://deb.debian.org/debian unstable/main i386 python3.12-minimal i386 3.12.9-1 [2238 kB]
Get: 23 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB]
Get: 24 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB]
Get: 25 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB]
Get: 26 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3+b1 [43.2 kB]
Get: 27 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB]
Get: 28 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB]
Get: 29 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB]
Get: 30 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.4-4 [96.4 kB]
Get: 31 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB]
Get: 32 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB]
Get: 33 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-5 [301 kB]
Get: 34 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB]
Get: 35 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB]
Get: 36 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-3 [862 kB]
Get: 37 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB]
Get: 38 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.2-1 [24.3 kB]
Get: 39 http://deb.debian.org/debian unstable/main i386 comerr-dev i386 2.1-1.47.2-1 [56.2 kB]
Get: 40 http://deb.debian.org/debian unstable/main i386 cython3 i386 3.0.11+dfsg-2 [3020 kB]
Get: 41 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 42 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-3 [539 kB]
Get: 43 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB]
Get: 44 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 45 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 46 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 47 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB]
Get: 48 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB]
Get: 49 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-1 [458 kB]
Get: 50 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-6 [9582 kB]
Get: 51 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB]
Get: 52 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB]
Get: 53 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 54 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 55 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.1 [920 kB]
Get: 56 http://deb.debian.org/debian unstable/main i386 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 57 http://deb.debian.org/debian unstable/main i386 python3-more-itertools all 10.6.0-1 [65.3 kB]
Get: 58 http://deb.debian.org/debian unstable/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 59 http://deb.debian.org/debian unstable/main i386 python3-typeguard all 4.4.2-1 [37.3 kB]
Get: 60 http://deb.debian.org/debian unstable/main i386 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 61 http://deb.debian.org/debian unstable/main i386 python3-jaraco.context all 6.0.0-1 [7984 B]
Get: 62 http://deb.debian.org/debian unstable/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 63 http://deb.debian.org/debian unstable/main i386 python3-pkg-resources all 75.8.0-1 [222 kB]
Get: 64 http://deb.debian.org/debian unstable/main i386 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 65 http://deb.debian.org/debian unstable/main i386 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 66 http://deb.debian.org/debian unstable/main i386 python3-setuptools all 75.8.0-1 [724 kB]
Get: 67 http://deb.debian.org/debian unstable/main i386 dh-python all 6.20250108 [113 kB]
Get: 68 http://deb.debian.org/debian unstable/main i386 help2man i386 1.49.3 [198 kB]
Get: 69 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.21.3-4 [35.0 kB]
Get: 70 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.21.3-4 [83.7 kB]
Get: 71 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-4 [9600 B]
Get: 72 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.21.3-4 [354 kB]
Get: 73 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.21.3-4 [149 kB]
Get: 74 http://deb.debian.org/debian unstable/main i386 libgssrpc4t64 i386 1.21.3-4 [63.4 kB]
Get: 75 http://deb.debian.org/debian unstable/main i386 libkadm5clnt-mit12 i386 1.21.3-4 [44.1 kB]
Get: 76 http://deb.debian.org/debian unstable/main i386 libkdb5-10t64 i386 1.21.3-4 [45.3 kB]
Get: 77 http://deb.debian.org/debian unstable/main i386 libkadm5srv-mit12 i386 1.21.3-4 [57.7 kB]
Get: 78 http://deb.debian.org/debian unstable/main i386 krb5-multidev i386 1.21.3-4 [126 kB]
Get: 79 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b6 [308 kB]
Get: 80 http://deb.debian.org/debian unstable/main i386 libbrotli-dev i386 1.1.0-2+b6 [313 kB]
Get: 81 http://deb.debian.org/debian unstable/main i386 libbz2-dev i386 1.0.8-6 [32.1 kB]
Get: 82 http://deb.debian.org/debian unstable/main i386 libidn2-0 i386 2.3.7-2+b1 [130 kB]
Get: 83 http://deb.debian.org/debian unstable/main i386 libp11-kit0 i386 0.25.5-3 [423 kB]
Get: 84 http://deb.debian.org/debian unstable/main i386 libtasn1-6 i386 4.20.0-2 [51.6 kB]
Get: 85 http://deb.debian.org/debian unstable/main i386 libgnutls30t64 i386 3.8.9-2 [1462 kB]
Get: 86 http://deb.debian.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-8+b1 [20.9 kB]
Get: 87 http://deb.debian.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-8+b1 [61.3 kB]
Get: 88 http://deb.debian.org/debian unstable/main i386 libldap2 i386 2.6.9+dfsg-1 [205 kB]
Get: 89 http://deb.debian.org/debian unstable/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB]
Get: 90 http://deb.debian.org/debian unstable/main i386 libnghttp3-9 i386 1.6.0-2 [75.9 kB]
Get: 91 http://deb.debian.org/debian unstable/main i386 libngtcp2-16 i386 1.9.1-1 [151 kB]
Get: 92 http://deb.debian.org/debian unstable/main i386 libngtcp2-crypto-gnutls8 i386 1.9.1-1 [19.1 kB]
Get: 93 http://deb.debian.org/debian unstable/main i386 libpsl5t64 i386 0.21.2-1.1+b1 [57.7 kB]
Get: 94 http://deb.debian.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b5 [62.4 kB]
Get: 95 http://deb.debian.org/debian unstable/main i386 libssh2-1t64 i386 1.11.1-1 [256 kB]
Get: 96 http://deb.debian.org/debian unstable/main i386 libcurl3t64-gnutls i386 8.12.1-2 [411 kB]
Get: 97 http://deb.debian.org/debian unstable/main i386 libevent-2.1-7t64 i386 2.1.12-stable-10+b1 [195 kB]
Get: 98 http://deb.debian.org/debian unstable/main i386 libunbound8 i386 1.22.0-1+b1 [633 kB]
Get: 99 http://deb.debian.org/debian unstable/main i386 libgnutls-dane0t64 i386 3.8.9-2 [453 kB]
Get: 100 http://deb.debian.org/debian unstable/main i386 libgnutls-openssl27t64 i386 3.8.9-2 [453 kB]
Get: 101 http://deb.debian.org/debian unstable/main i386 libidn2-dev i386 2.3.7-2+b1 [126 kB]
Get: 102 http://deb.debian.org/debian unstable/main i386 libp11-kit-dev i386 0.25.5-3 [208 kB]
Get: 103 http://deb.debian.org/debian unstable/main i386 libtasn1-6-dev i386 4.20.0-2 [103 kB]
Get: 104 http://deb.debian.org/debian unstable/main i386 libgmpxx4ldbl i386 2:6.3.0+dfsg-3 [329 kB]
Get: 105 http://deb.debian.org/debian unstable/main i386 libgmp-dev i386 2:6.3.0+dfsg-3 [661 kB]
Get: 106 http://deb.debian.org/debian unstable/main i386 nettle-dev i386 3.10.1-1 [1335 kB]
Get: 107 http://deb.debian.org/debian unstable/main i386 libgnutls28-dev i386 3.8.9-2 [1464 kB]
Get: 108 http://deb.debian.org/debian unstable/main i386 libkrb5-dev i386 1.21.3-4 [15.9 kB]
Get: 109 http://deb.debian.org/debian unstable/main i386 libldap-dev i386 2.6.9+dfsg-1 [328 kB]
Get: 110 http://deb.debian.org/debian unstable/main i386 libpkgconf3 i386 1.8.1-4 [38.4 kB]
Get: 111 http://deb.debian.org/debian unstable/main i386 pkgconf-bin i386 1.8.1-4 [30.6 kB]
Get: 112 http://deb.debian.org/debian unstable/main i386 pkgconf i386 1.8.1-4 [26.2 kB]
Get: 113 http://deb.debian.org/debian unstable/main i386 libnghttp2-dev i386 1.64.0-1 [123 kB]
Get: 114 http://deb.debian.org/debian unstable/main i386 libnghttp3-dev i386 1.6.0-2 [101 kB]
Get: 115 http://deb.debian.org/debian unstable/main i386 libngtcp2-crypto-gnutls-dev i386 1.9.1-1 [24.0 kB]
Get: 116 http://deb.debian.org/debian unstable/main i386 libngtcp2-dev i386 1.9.1-1 [202 kB]
Get: 117 http://deb.debian.org/debian unstable/main i386 libpsl-dev i386 0.21.2-1.1+b1 [78.4 kB]
Get: 118 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1+b1 [916 kB]
Get: 119 http://deb.debian.org/debian unstable/main i386 librtmp-dev i386 2.4+20151223.gitfa8646d.1-2+b5 [72.3 kB]
Get: 120 http://deb.debian.org/debian unstable/main i386 libssl-dev i386 3.4.1-1 [2837 kB]
Get: 121 http://deb.debian.org/debian unstable/main i386 libssh2-1-dev i386 1.11.1-1 [407 kB]
Get: 122 http://deb.debian.org/debian unstable/main i386 libzstd-dev i386 1.5.6+dfsg-2 [354 kB]
Get: 123 http://deb.debian.org/debian unstable/main i386 libcurl4-gnutls-dev i386 8.12.1-2 [542 kB]
Get: 124 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.23-1+b1 [48.4 kB]
Get: 125 http://deb.debian.org/debian unstable/main i386 libdeflate-dev i386 1.23-1+b1 [57.5 kB]
Get: 126 http://deb.debian.org/debian unstable/main i386 libexpat1-dev i386 2.6.4-1 [165 kB]
Get: 127 http://deb.debian.org/debian unstable/main i386 libhtscodecs2 i386 1.6.1-2 [70.9 kB]
Get: 128 http://deb.debian.org/debian unstable/main i386 libhts3t64 i386 1.21+ds-1 [506 kB]
Get: 129 http://deb.debian.org/debian unstable/main i386 liblzma-dev i386 5.6.3-1+b1 [328 kB]
Get: 130 http://deb.debian.org/debian unstable/main i386 libhts-dev i386 1.21+ds-1 [1725 kB]
Get: 131 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 132 http://deb.debian.org/debian unstable/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 133 http://deb.debian.org/debian unstable/main i386 libjs-sphinxdoc all 8.1.3-5 [30.5 kB]
Get: 134 http://deb.debian.org/debian unstable/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get: 135 http://deb.debian.org/debian unstable/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB]
Get: 136 http://deb.debian.org/debian unstable/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB]
Get: 137 http://deb.debian.org/debian unstable/main i386 libpython3.13 i386 3.13.2-1 [2199 kB]
Get: 138 http://deb.debian.org/debian unstable/main i386 libpython3.13-dev i386 3.13.2-1 [5181 kB]
Get: 139 http://deb.debian.org/debian unstable/main i386 libpython3-dev i386 3.13.1-2 [10.2 kB]
Get: 140 http://deb.debian.org/debian unstable/main i386 libpython3.12-stdlib i386 3.12.9-1 [1972 kB]
Get: 141 http://deb.debian.org/debian unstable/main i386 libpython3.12t64 i386 3.12.9-1 [2172 kB]
Get: 142 http://deb.debian.org/debian unstable/main i386 libpython3.12-dev i386 3.12.9-1 [5283 kB]
Get: 143 http://deb.debian.org/debian unstable/main i386 libpython3-all-dev i386 3.13.1-2 [1072 B]
Get: 144 http://deb.debian.org/debian unstable/main i386 python3.12 i386 3.12.9-1 [681 kB]
Get: 145 http://deb.debian.org/debian unstable/main i386 python3-all i386 3.13.1-2 [1052 B]
Get: 146 http://deb.debian.org/debian unstable/main i386 python3.13-dev i386 3.13.2-1 [505 kB]
Get: 147 http://deb.debian.org/debian unstable/main i386 python3-dev i386 3.13.1-2 [26.1 kB]
Get: 148 http://deb.debian.org/debian unstable/main i386 python3.12-dev i386 3.12.9-1 [505 kB]
Get: 149 http://deb.debian.org/debian unstable/main i386 python3-all-dev i386 3.13.1-2 [1076 B]
Get: 150 http://deb.debian.org/debian unstable/main i386 python3-click all 8.2.0-1 [98.7 kB]
Get: 151 http://deb.debian.org/debian unstable/main i386 python3-humanfriendly all 10.0-6 [85.6 kB]
Get: 152 http://deb.debian.org/debian unstable/main i386 python3-coloredlogs all 15.0.1-1 [47.4 kB]
Get: 153 http://deb.debian.org/debian unstable/main i386 python3-iniconfig all 1.1.1-2 [6396 B]
Get: 154 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-1 [55.3 kB]
Get: 155 http://deb.debian.org/debian unstable/main i386 python3-pluggy all 1.5.0-1 [26.9 kB]
Get: 156 http://deb.debian.org/debian unstable/main i386 python3-pytest all 8.3.4-1 [250 kB]
Fetched 85.6 MB in 1s (72.8 MB/s)
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Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
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Setting up po-debconf (1.0.21+nmu1) ...
Setting up libpsl5t64:i386 (0.21.2-1.1+b1) ...
Setting up python3 (3.13.1-2) ...
Setting up python3-zipp (3.21.0-1) ...
Setting up python3-click (8.2.0-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libpsl-dev:i386 (0.21.2-1.1+b1) ...
Setting up python3-packaging (24.2-1) ...
Setting up libgnutls-dane0t64:i386 (3.8.9-2) ...
Setting up python3-humanfriendly (10.0-6) ...
Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up libgssrpc4t64:i386 (1.21.3-4) ...
Setting up libpython3.13-dev:i386 (3.13.2-1) ...
Setting up cython3 (3.0.11+dfsg-2) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up python3-numpy (1:2.2.3+ds-2) ...
Setting up python3-pluggy (1.5.0-1) ...
Setting up libnsl2:i386 (1.3.0-3+b3) ...
Setting up python3-coloredlogs (15.0.1-1) ...
Setting up libngtcp2-crypto-gnutls8:i386 (1.9.1-1) ...
Setting up libkadm5clnt-mit12:i386 (1.21.3-4) ...
Setting up libgnutls28-dev:i386 (3.8.9-2) ...
Setting up python3-more-itertools (10.6.0-1) ...
Setting up python3-iniconfig (1.1.1-2) ...
Setting up libpython3-dev:i386 (3.13.1-2) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up libpython3.12-stdlib:i386 (3.12.9-1) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up libkdb5-10t64:i386 (1.21.3-4) ...
Setting up python3.13-dev (3.13.2-1) ...
Setting up python3-pytest (8.3.4-1) ...
Setting up python3.12 (3.12.9-1) ...
Setting up python3-typeguard (4.4.2-1) ...
Setting up libcurl3t64-gnutls:i386 (8.12.1-2) ...
Setting up python3-all (3.13.1-2) ...
Setting up debhelper (13.24.1) ...
Setting up libngtcp2-crypto-gnutls-dev:i386 (1.9.1-1) ...
Setting up libpython3.12t64:i386 (3.12.9-1) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up python3-dev (3.13.1-2) ...
Setting up librtmp-dev:i386 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up libkadm5srv-mit12:i386 (1.21.3-4) ...
Setting up libhts3t64:i386 (1.21+ds-1) ...
Setting up krb5-multidev:i386 (1.21.3-4) ...
Setting up python3-pkg-resources (75.8.0-1) ...
Setting up python3-setuptools (75.8.0-1) ...
Setting up libpython3.12-dev:i386 (3.12.9-1) ...
Setting up libkrb5-dev:i386 (1.21.3-4) ...
Setting up libpython3-all-dev:i386 (3.13.1-2) ...
Setting up python3.12-dev (3.12.9-1) ...
Setting up dh-python (6.20250108) ...
Setting up python3-all-dev (3.13.1-2) ...
Setting up libcurl4-gnutls-dev:i386 (8.12.1-2) ...
Setting up libhts-dev:i386 (1.21+ds-1) ...
Processing triggers for libc-bin (2.40-7) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/cyvcf2-0.31.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cyvcf2_0.31.1-2_source.changes
dpkg-buildpackage: info: source package cyvcf2
dpkg-buildpackage: info: source version 0.31.1-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture i386
dpkg-source: info: using options from cyvcf2-0.31.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/
debian/rules clean
dh clean --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
pybuild --clean -i python{version} -p "3.12 3.13"
I: pybuild base:311: python3.12 setup.py clean
warning: cyvcf2/cyvcf2.pyx:1377:36: Assigning to 'char *' from 'const char *' discards const qualifier
warning: cyvcf2/cyvcf2.pyx:2079:17: Assigning to 'bcf_hdr_t *' from 'const bcf_hdr_t *' discards const qualifier
warning: cyvcf2/cyvcf2.pyx:2278:29: Assigning to 'char *' from 'const char *' discards const qualifier
warning: cyvcf2/cyvcf2.pyx:2350:15: Assigning to 'bcf_hdr_t *' from 'const bcf_hdr_t *' discards const qualifier
Compiling cyvcf2/cyvcf2.pyx because it changed.
[1/1] Cythonizing cyvcf2/cyvcf2.pyx
running clean
removing '/build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build' (and everything under it)
'build/bdist.linux-i686' does not exist -- can't clean it
'build/scripts-3.12' does not exist -- can't clean it
I: pybuild base:311: python3.13 setup.py clean
running clean
removing '/build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build' (and everything under it)
'build/bdist.linux-i686' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
dh_autoreconf_clean -O--buildsystem=pybuild
debian/rules override_dh_clean
make[1]: Entering directory '/build/reproducible-path/cyvcf2-0.31.1'
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/python3-cyvcf2.substvars debian/files
rm -fr -- debian/python3-cyvcf2/ debian/tmp/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \)
rm -rf cyvcf2.egg-info cyvcf2/cyvcf2.c __o.vcf
find . -name "*.so" -delete
make[1]: Leaving directory '/build/reproducible-path/cyvcf2-0.31.1'
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
pybuild --configure -i python{version} -p "3.12 3.13"
I: pybuild base:311: python3.12 setup.py config
warning: cyvcf2/cyvcf2.pyx:1377:36: Assigning to 'char *' from 'const char *' discards const qualifier
warning: cyvcf2/cyvcf2.pyx:2079:17: Assigning to 'bcf_hdr_t *' from 'const bcf_hdr_t *' discards const qualifier
warning: cyvcf2/cyvcf2.pyx:2278:29: Assigning to 'char *' from 'const char *' discards const qualifier
warning: cyvcf2/cyvcf2.pyx:2350:15: Assigning to 'bcf_hdr_t *' from 'const bcf_hdr_t *' discards const qualifier
Compiling cyvcf2/cyvcf2.pyx because it changed.
[1/1] Cythonizing cyvcf2/cyvcf2.pyx
running config
I: pybuild base:311: python3.13 setup.py config
running config
dh_auto_build -O--buildsystem=pybuild
pybuild --build -i python{version} -p "3.12 3.13"
I: pybuild base:311: /usr/bin/python3.12 setup.py build
running build
running build_py
creating /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
copying cyvcf2/__main__.py -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
copying cyvcf2/__init__.py -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
copying cyvcf2/cli.py -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
running egg_info
creating cyvcf2.egg-info
writing cyvcf2.egg-info/PKG-INFO
writing dependency_links to cyvcf2.egg-info/dependency_links.txt
writing entry points to cyvcf2.egg-info/entry_points.txt
writing requirements to cyvcf2.egg-info/requires.txt
writing top-level names to cyvcf2.egg-info/top_level.txt
writing manifest file 'cyvcf2.egg-info/SOURCES.txt'
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
reading manifest file 'cyvcf2.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
no previously-included directories found matching 'cyvcf2/tests'
warning: no files found matching 'htslib/LICENSE'
warning: no files found matching 'htslib/README'
warning: no files found matching '*.[ch]' under directory 'htslib'
warning: no previously-included files found matching 'htslib/*config*.h'
warning: no files found matching 'htslib/configure.ac'
warning: no files found matching 'htslib/m4/*.m4'
warning: no files found matching 'htslib/*.in'
warning: no files found matching 'htslib/configure'
warning: no files found matching 'htslib/version.sh'
warning: no files found matching 'htslib/Makefile'
warning: no files found matching 'htslib/*.mk'
warning: no previously-included files found matching 'htslib/config.mk'
warning: no previously-included files found matching 'htslib/htscodecs.mk'
adding license file 'LICENSE'
writing manifest file 'cyvcf2.egg-info/SOURCES.txt'
copying cyvcf2/cyvcf2.c -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
copying cyvcf2/cyvcf2.pxd -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
copying cyvcf2/cyvcf2.pyx -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
copying cyvcf2/helpers.c -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
copying cyvcf2/helpers.h -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
copying cyvcf2/relatedness.h -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
running build_ext
# cyvcf2: htslib mode is EXTERNAL
building 'cyvcf2.cyvcf2' extension
creating build/temp.linux-i686-cpython-312/cyvcf2
i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cyvcf2-0.31.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icyvcf2 -I/usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include -Ihtslib -Ihtslib/htslib -I/usr/include/python3.12 -c cyvcf2/cyvcf2.c -o build/temp.linux-i686-cpython-312/cyvcf2/cyvcf2.o -Wno-sign-compare -Wno-unused-function -Wno-strict-prototypes -Wno-unused-result -Wno-discarded-qualifiers
In file included from /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h:1913,
from /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h:12,
from /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h:5,
from cyvcf2/cyvcf2.c:1266:
/usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cyvcf2-0.31.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icyvcf2 -I/usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include -Ihtslib -Ihtslib/htslib -I/usr/include/python3.12 -c cyvcf2/helpers.c -o build/temp.linux-i686-cpython-312/cyvcf2/helpers.o -Wno-sign-compare -Wno-unused-function -Wno-strict-prototypes -Wno-unused-result -Wno-discarded-qualifiers
i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cyvcf2-0.31.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-312/cyvcf2/cyvcf2.o build/temp.linux-i686-cpython-312/cyvcf2/helpers.o -L/usr/lib/i386-linux-gnu -lhts -o /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/cyvcf2.cpython-312-i386-linux-gnu.so
I: pybuild base:311: /usr/bin/python3 setup.py build
running build
running build_py
creating /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
copying cyvcf2/__main__.py -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
copying cyvcf2/__init__.py -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
copying cyvcf2/cli.py -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
running egg_info
writing cyvcf2.egg-info/PKG-INFO
writing dependency_links to cyvcf2.egg-info/dependency_links.txt
writing entry points to cyvcf2.egg-info/entry_points.txt
writing requirements to cyvcf2.egg-info/requires.txt
writing top-level names to cyvcf2.egg-info/top_level.txt
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
reading manifest file 'cyvcf2.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
no previously-included directories found matching 'cyvcf2/tests'
warning: no files found matching 'htslib/LICENSE'
warning: no files found matching 'htslib/README'
warning: no files found matching '*.[ch]' under directory 'htslib'
warning: no previously-included files found matching 'htslib/*config*.h'
warning: no files found matching 'htslib/configure.ac'
warning: no files found matching 'htslib/m4/*.m4'
warning: no files found matching 'htslib/*.in'
warning: no files found matching 'htslib/configure'
warning: no files found matching 'htslib/version.sh'
warning: no files found matching 'htslib/Makefile'
warning: no files found matching 'htslib/*.mk'
warning: no previously-included files found matching 'htslib/config.mk'
warning: no previously-included files found matching 'htslib/htscodecs.mk'
adding license file 'LICENSE'
writing manifest file 'cyvcf2.egg-info/SOURCES.txt'
copying cyvcf2/cyvcf2.c -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
copying cyvcf2/cyvcf2.pxd -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
copying cyvcf2/cyvcf2.pyx -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
copying cyvcf2/helpers.c -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
copying cyvcf2/helpers.h -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
copying cyvcf2/relatedness.h -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
running build_ext
# cyvcf2: htslib mode is EXTERNAL
building 'cyvcf2.cyvcf2' extension
creating build/temp.linux-i686-cpython-313/cyvcf2
i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cyvcf2-0.31.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icyvcf2 -I/usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include -Ihtslib -Ihtslib/htslib -I/usr/include/python3.13 -c cyvcf2/cyvcf2.c -o build/temp.linux-i686-cpython-313/cyvcf2/cyvcf2.o -Wno-sign-compare -Wno-unused-function -Wno-strict-prototypes -Wno-unused-result -Wno-discarded-qualifiers
In file included from /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h:1913,
from /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h:12,
from /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h:5,
from cyvcf2/cyvcf2.c:1266:
/usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cyvcf2-0.31.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icyvcf2 -I/usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include -Ihtslib -Ihtslib/htslib -I/usr/include/python3.13 -c cyvcf2/helpers.c -o build/temp.linux-i686-cpython-313/cyvcf2/helpers.o -Wno-sign-compare -Wno-unused-function -Wno-strict-prototypes -Wno-unused-result -Wno-discarded-qualifiers
i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cyvcf2-0.31.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-313/cyvcf2/cyvcf2.o build/temp.linux-i686-cpython-313/cyvcf2/helpers.o -L/usr/lib/i386-linux-gnu -lhts -o /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/cyvcf2.cpython-313-i386-linux-gnu.so
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/cyvcf2-0.31.1'
echo "cp -a cyvcf2/tests {build_dir}/cyvcf2; seems to be ignored - copying tests dir manually"
cp -a cyvcf2/tests {build_dir}/cyvcf2; seems to be ignored - copying tests dir manually
for tdir in .pybuild/cpython3_* ; do \
cp -a cyvcf2/tests ${tdir}/build/cyvcf2 ; \
done
dh_auto_test
pybuild --test --test-pytest -i python{version} -p "3.12 3.13"
I: pybuild base:311: cd /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build; python3.12 -m pytest
============================= test session starts ==============================
platform linux -- Python 3.12.9, pytest-8.3.4, pluggy-1.5.0
rootdir: /build/reproducible-path/cyvcf2-0.31.1
configfile: setup.cfg
plugins: typeguard-4.4.2
collected 112 items
cyvcf2/tests/test_cli.py . [ 0%]
cyvcf2/tests/test_hemi.py . [ 1%]
cyvcf2/tests/test_reader.py ............................................ [ 41%]
......................................s................ [ 90%]
cyvcf2/tests/test_writer.py ........... [100%]
======================== 111 passed, 1 skipped in 2.56s ========================
I: pybuild base:311: cd /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build; python3.13 -m pytest
============================= test session starts ==============================
platform linux -- Python 3.13.2, pytest-8.3.4, pluggy-1.5.0
rootdir: /build/reproducible-path/cyvcf2-0.31.1
configfile: setup.cfg
plugins: typeguard-4.4.2
collected 112 items
cyvcf2/tests/test_cli.py . [ 0%]
cyvcf2/tests/test_hemi.py . [ 1%]
cyvcf2/tests/test_reader.py ............................................ [ 41%]
......................................s................ [ 90%]
cyvcf2/tests/test_writer.py ........... [100%]
======================== 111 passed, 1 skipped in 2.32s ========================
rm -fr -- /tmp/dh-xdg-rundir-lq4Stgmi
# clean up after testing
find . -name out.vcf -delete
make[1]: Leaving directory '/build/reproducible-path/cyvcf2-0.31.1'
create-stamp debian/debhelper-build-stamp
dh_testroot -O--buildsystem=pybuild
dh_prep -O--buildsystem=pybuild
rm -f -- debian/python3-cyvcf2.substvars
rm -fr -- debian/.debhelper/generated/python3-cyvcf2/ debian/python3-cyvcf2/ debian/tmp/
dh_auto_install --destdir=debian/python3-cyvcf2/ -O--buildsystem=pybuild
install -m0755 -d /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2
pybuild --install -i python{version} -p "3.12 3.13" --dest-dir=/build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2
I: pybuild base:311: /usr/bin/python3.12 setup.py install --root /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:79: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running egg_info
writing cyvcf2.egg-info/PKG-INFO
writing dependency_links to cyvcf2.egg-info/dependency_links.txt
writing entry points to cyvcf2.egg-info/entry_points.txt
writing requirements to cyvcf2.egg-info/requires.txt
writing top-level names to cyvcf2.egg-info/top_level.txt
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
reading manifest file 'cyvcf2.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
no previously-included directories found matching 'cyvcf2/tests'
warning: no files found matching 'htslib/LICENSE'
warning: no files found matching 'htslib/README'
warning: no files found matching '*.[ch]' under directory 'htslib'
warning: no previously-included files found matching 'htslib/*config*.h'
warning: no files found matching 'htslib/configure.ac'
warning: no files found matching 'htslib/m4/*.m4'
warning: no files found matching 'htslib/*.in'
warning: no files found matching 'htslib/configure'
warning: no files found matching 'htslib/version.sh'
warning: no files found matching 'htslib/Makefile'
warning: no files found matching 'htslib/*.mk'
warning: no previously-included files found matching 'htslib/config.mk'
warning: no previously-included files found matching 'htslib/htscodecs.mk'
adding license file 'LICENSE'
writing manifest file 'cyvcf2.egg-info/SOURCES.txt'
copying cyvcf2/cyvcf2.c -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2
running build_ext
# cyvcf2: htslib mode is EXTERNAL
running install_lib
creating /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages
creating /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/cyvcf2.pyx -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
creating /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/__pycache__/cli.cpython-312.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/cyvcf2.cpython-312-i386-linux-gnu.so -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
creating /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-format-string.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/decomposed.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/bug.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test_gt_bases.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test_cli.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-hemi.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test_hemi.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/empty.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test_writer.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test.mnp.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/multi-contig.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz.tbi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-diff.csi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test_gt_alt_freqs.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
creating /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/__pycache__/test_cli.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/__pycache__/test_reader.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/__pycache__/test_hemi.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/__pycache__/test_writer.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/multi-contig.vcf.gz.tbi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/no-seq-names.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test_reader.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz.tbi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-invalid-header.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/issue_44.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/multi-contig.vcf.gz.csi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/no-seq-len.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/seg.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-alt-repr.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test.bug.117.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test.isa.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/issue_198.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test.comp_het.3.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/multi-contig.bcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-genotypes.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test.snpeff.bcf.csi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test.snpeff.bcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/o.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/multi-contig.bcf.csi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/__init__.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test.vcf.gz.tbi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-haploidX.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test.snpeff.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/tests/test-no-genotypes.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/relatedness.h -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/helpers.c -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/cyvcf2.pxd -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/cyvcf2.c -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/__main__.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/__init__.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/helpers.h -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.12_cyvcf2/build/cyvcf2/cli.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/test_cli.py to test_cli.cpython-312.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/test_hemi.py to test_hemi.cpython-312.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/test_writer.py to test_writer.cpython-312.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/test_reader.py to test_reader.cpython-312.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/__main__.py to __main__.cpython-312.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2/cli.py to cli.cpython-312.pyc
running install_egg_info
Copying cyvcf2.egg-info to /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.12/dist-packages/cyvcf2-0.31.1.egg-info
Skipping SOURCES.txt
running install_scripts
Installing cyvcf2 script to /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/bin
I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:79: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running egg_info
writing cyvcf2.egg-info/PKG-INFO
writing dependency_links to cyvcf2.egg-info/dependency_links.txt
writing entry points to cyvcf2.egg-info/entry_points.txt
writing requirements to cyvcf2.egg-info/requires.txt
writing top-level names to cyvcf2.egg-info/top_level.txt
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
reading manifest file 'cyvcf2.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
no previously-included directories found matching 'cyvcf2/tests'
warning: no files found matching 'htslib/LICENSE'
warning: no files found matching 'htslib/README'
warning: no files found matching '*.[ch]' under directory 'htslib'
warning: no previously-included files found matching 'htslib/*config*.h'
warning: no files found matching 'htslib/configure.ac'
warning: no files found matching 'htslib/m4/*.m4'
warning: no files found matching 'htslib/*.in'
warning: no files found matching 'htslib/configure'
warning: no files found matching 'htslib/version.sh'
warning: no files found matching 'htslib/Makefile'
warning: no files found matching 'htslib/*.mk'
warning: no previously-included files found matching 'htslib/config.mk'
warning: no previously-included files found matching 'htslib/htscodecs.mk'
adding license file 'LICENSE'
writing manifest file 'cyvcf2.egg-info/SOURCES.txt'
copying cyvcf2/cyvcf2.c -> /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2
running build_ext
# cyvcf2: htslib mode is EXTERNAL
running install_lib
creating /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages
creating /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/cyvcf2.pyx -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
creating /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/__pycache__/cli.cpython-313.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/__pycache__
creating /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-format-string.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/decomposed.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/bug.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test_gt_bases.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test_cli.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-hemi.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test_hemi.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/empty.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test_writer.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test.mnp.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/multi-contig.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz.tbi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-diff.csi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test_gt_alt_freqs.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
creating /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/__pycache__/test_cli.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/__pycache__/test_reader.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/__pycache__/test_writer.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/__pycache__/test_hemi.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/__pycache__
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/multi-contig.vcf.gz.tbi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/no-seq-names.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test_reader.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz.tbi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-invalid-header.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/issue_44.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/multi-contig.vcf.gz.csi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/no-seq-len.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/seg.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-alt-repr.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test.bug.117.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test.isa.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/issue_198.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test.comp_het.3.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/multi-contig.bcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-genotypes.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test.snpeff.bcf.csi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test.snpeff.bcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/o.vcf.gz -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/multi-contig.bcf.csi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/__init__.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test.vcf.gz.tbi -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-haploidX.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test.snpeff.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/tests/test-no-genotypes.vcf -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/relatedness.h -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/helpers.c -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/cyvcf2.pxd -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/cyvcf2.c -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/__main__.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/cyvcf2.cpython-313-i386-linux-gnu.so -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/__init__.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/helpers.h -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
copying /build/reproducible-path/cyvcf2-0.31.1/.pybuild/cpython3_3.13_cyvcf2/build/cyvcf2/cli.py -> /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/test_cli.py to test_cli.cpython-313.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/test_hemi.py to test_hemi.cpython-313.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/test_writer.py to test_writer.cpython-313.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/test_reader.py to test_reader.cpython-313.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/tests/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/__main__.py to __main__.cpython-313.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2/cli.py to cli.cpython-313.pyc
running install_egg_info
Copying cyvcf2.egg-info to /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/cyvcf2-0.31.1.egg-info
Skipping SOURCES.txt
running install_scripts
Installing cyvcf2 script to /build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/bin
rm -f debian/python3-cyvcf2.debhelper.log
debian/rules override_dh_install
make[1]: Entering directory '/build/reproducible-path/cyvcf2-0.31.1'
dh_numpy3
mv debian/python3-cyvcf2.substvars.new debian/python3-cyvcf2.substvars
dh_install
make[1]: Leaving directory '/build/reproducible-path/cyvcf2-0.31.1'
dh_installdocs -O--buildsystem=pybuild
install -m0755 -d debian/python3-cyvcf2/usr/share/doc/python3-cyvcf2
install -p -m0644 debian/copyright debian/python3-cyvcf2/usr/share/doc/python3-cyvcf2/copyright
dh_installchangelogs -O--buildsystem=pybuild
install -m0755 -d debian/python3-cyvcf2/usr/share/doc/python3-cyvcf2
install -p -m0644 debian/.debhelper/generated/python3-cyvcf2/dh_installchangelogs.dch.trimmed debian/python3-cyvcf2/usr/share/doc/python3-cyvcf2/changelog.Debian
install -p -m0644 ./CHANGES.md debian/python3-cyvcf2/usr/share/doc/python3-cyvcf2/changelog
rm -f debian/python3-cyvcf2.debhelper.log
debian/rules override_dh_installman
make[1]: Entering directory '/build/reproducible-path/cyvcf2-0.31.1'
PATH=$PATH:/build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/bin \
PYTHONPATH=/build/reproducible-path/cyvcf2-0.31.1/debian/python3-cyvcf2/usr/lib/python3.13/dist-packages/ \
help2man --no-info \
--name="fast parsing of VCF and BCF including region-queries" \
--version-string=0.31.1 cyvcf2 > debian/cyvcf2.1
dh_installman
install -m0755 -d debian/python3-cyvcf2/usr/share/man/man1/
install -p -m0644 ./debian/cyvcf2.1 debian/python3-cyvcf2/usr/share/man/man1/cyvcf2.1
man-recode --to-code UTF-8 --suffix .dh-new debian/python3-cyvcf2/usr/share/man/man1/cyvcf2.1
mv debian/python3-cyvcf2/usr/share/man/man1/cyvcf2.1.dh-new debian/python3-cyvcf2/usr/share/man/man1/cyvcf2.1
chmod 0644 -- debian/python3-cyvcf2/usr/share/man/man1/cyvcf2.1
make[1]: Leaving directory '/build/reproducible-path/cyvcf2-0.31.1'
dh_python3 -O--buildsystem=pybuild
D: dh_python3 dh_python3:180: version: 6.20250108
D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild']
D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild'])
D: dh_python3 dh_python3:183: supported Python versions: 3.12,3.13 (default=3.13)
D: dh_python3 debhelper:174: source=cyvcf2, binary packages=['python3-cyvcf2']
D: dh_python3 dh_python3:205: processing package python3-cyvcf2...
D: dh_python3 fs:50: moving files from debian/python3-cyvcf2/usr/lib/python3.12/dist-packages to debian/python3-cyvcf2/usr/lib/python3/dist-packages/
D: dh_python3 fs:50: moving files from debian/python3-cyvcf2/usr/lib/python3.13/dist-packages to debian/python3-cyvcf2/usr/lib/python3/dist-packages/
D: dh_python3 fs:338: package python3-cyvcf2 details = {'requires.txt': {'debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2-0.31.1.egg-info/requires.txt'}, 'egg-info': {'debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2-0.31.1.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.12'), Version('3.13')}, 'ext_no_version': set()}
D: dh_python3 depends:103: generating dependencies for package python3-cyvcf2
D: dh_python3 pydist:175: trying to find dependency for click (python=None)
D: dh_python3 pydist:209: dependency: module seems to be installed
D: dh_python3 pydist:284: dependency: included in build-deps
D: dh_python3 pydist:175: trying to find dependency for coloredlogs (python=None)
D: dh_python3 pydist:209: dependency: module seems to be installed
D: dh_python3 pydist:284: dependency: included in build-deps
D: dh_python3 pydist:175: trying to find dependency for numpy>=1.16.0 (python=None)
D: dh_python3 pydist:209: dependency: module seems to be installed
D: dh_python3 pydist:284: dependency: included in build-deps
D: dh_python3 depends:253: D={'python3-numpy', 'python3 (<< 3.14)', 'python3-coloredlogs', 'python3:any', 'python3 (>= 3.12~)', 'python3-click'}; R=[]; S=[]; E=[], B=[]; RT=[]
dh_installsystemduser -O--buildsystem=pybuild
dh_perl -O--buildsystem=pybuild
dh_link -O--buildsystem=pybuild
dh_strip_nondeterminism -O--buildsystem=pybuild
dh_compress -O--buildsystem=pybuild
cd debian/python3-cyvcf2
chmod a-x usr/share/doc/python3-cyvcf2/changelog usr/share/doc/python3-cyvcf2/changelog.Debian usr/share/man/man1/cyvcf2.1
gzip -9nf usr/share/doc/python3-cyvcf2/changelog usr/share/doc/python3-cyvcf2/changelog.Debian usr/share/man/man1/cyvcf2.1
cd '/build/reproducible-path/cyvcf2-0.31.1'
dh_fixperms -O--buildsystem=pybuild
find debian/python3-cyvcf2 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/python3-cyvcf2/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-cyvcf2/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-cyvcf2/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/python3-cyvcf2/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-cyvcf2 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-cyvcf2/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
find debian/python3-cyvcf2/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
dh_missing -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-cyvcf2/usr/lib/debug/.dwz/i386-linux-gnu
dwz -mdebian/python3-cyvcf2/usr/lib/debug/.dwz/i386-linux-gnu/python3-cyvcf2.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/python3-cyvcf2.debug -- debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-312-i386-linux-gnu.so debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-313-i386-linux-gnu.so
objcopy --compress-debug-sections debian/python3-cyvcf2/usr/lib/debug/.dwz/i386-linux-gnu/python3-cyvcf2.debug
chmod 0644 -- debian/python3-cyvcf2/usr/lib/debug/.dwz/i386-linux-gnu/python3-cyvcf2.debug
dh_strip -a -O--buildsystem=pybuild
install -m0755 -d debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/lib/debug/.build-id/41
objcopy --only-keep-debug --compress-debug-sections debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-312-i386-linux-gnu.so debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/lib/debug/.build-id/41/fdc5fedd1864631d3074b5952c33e344bd4d9a.debug
chmod 0644 -- debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/lib/debug/.build-id/41/fdc5fedd1864631d3074b5952c33e344bd4d9a.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-312-i386-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/lib/debug/.build-id/41/fdc5fedd1864631d3074b5952c33e344bd4d9a.debug debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-312-i386-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/lib/debug/.build-id/de
objcopy --only-keep-debug --compress-debug-sections debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-313-i386-linux-gnu.so debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/lib/debug/.build-id/de/2537f4a6bf611beee3afdbb219b62feb969568.debug
chmod 0644 -- debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/lib/debug/.build-id/de/2537f4a6bf611beee3afdbb219b62feb969568.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-313-i386-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/lib/debug/.build-id/de/2537f4a6bf611beee3afdbb219b62feb969568.debug debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-313-i386-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/lib/debug/.dwz
cp --reflink=auto -a debian/python3-cyvcf2/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/lib/debug/.dwz
rm -fr debian/python3-cyvcf2/usr/lib/debug/.dwz
rmdir -p --ignore-fail-on-non-empty debian/python3-cyvcf2/usr/lib/debug
install -m0755 -d debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/share/doc
ln -s python3-cyvcf2 debian/.debhelper/python3-cyvcf2/dbgsym-root/usr/share/doc/python3-cyvcf2-dbgsym
install -m0755 -d debian/.debhelper/python3-cyvcf2
dh_makeshlibs -a -O--buildsystem=pybuild
rm -f debian/python3-cyvcf2/DEBIAN/shlibs
dh_shlibdeps -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-cyvcf2/DEBIAN
dpkg-shlibdeps -Tdebian/python3-cyvcf2.substvars debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-312-i386-linux-gnu.so debian/python3-cyvcf2/usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-313-i386-linux-gnu.so
dh_installdeb -O--buildsystem=pybuild
install -m0755 -d debian/python3-cyvcf2/DEBIAN
printf '#!/bin/sh\nset -e\n' > debian/python3-cyvcf2/DEBIAN/postinst
cat debian/python3-cyvcf2.postinst.debhelper >> debian/python3-cyvcf2/DEBIAN/postinst
chmod 0755 -- debian/python3-cyvcf2/DEBIAN/postinst
printf '#!/bin/sh\nset -e\n' > debian/python3-cyvcf2/DEBIAN/prerm
cat debian/python3-cyvcf2.prerm.debhelper >> debian/python3-cyvcf2/DEBIAN/prerm
chmod 0755 -- debian/python3-cyvcf2/DEBIAN/prerm
dh_gencontrol -O--buildsystem=pybuild
install -m0755 -d debian/python3-cyvcf2/DEBIAN
echo misc:Depends= >> debian/python3-cyvcf2.substvars
echo misc:Pre-Depends= >> debian/python3-cyvcf2.substvars
install -m0755 -d debian/.debhelper/python3-cyvcf2/dbgsym-root/DEBIAN
dpkg-gencontrol -ppython3-cyvcf2 -ldebian/changelog -Tdebian/python3-cyvcf2.substvars -cdebian/control -Pdebian/.debhelper/python3-cyvcf2/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-cyvcf2-dbgsym "-DDepends=python3-cyvcf2 (= \${binary:Version})" "-DDescription=debug symbols for python3-cyvcf2" "-DBuild-Ids=41fdc5fedd1864631d3074b5952c33e344bd4d9a de2537f4a6bf611beee3afdbb219b62feb969568" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
chmod 0644 -- debian/.debhelper/python3-cyvcf2/dbgsym-root/DEBIAN/control
dpkg-gencontrol -ppython3-cyvcf2 -ldebian/changelog -Tdebian/python3-cyvcf2.substvars -cdebian/control -Pdebian/python3-cyvcf2
chmod 0644 -- debian/python3-cyvcf2/DEBIAN/control
dh_md5sums -O--buildsystem=pybuild
install -m0755 -d debian/python3-cyvcf2/DEBIAN
cd debian/python3-cyvcf2 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/python3-cyvcf2/DEBIAN/md5sums
install -m0755 -d debian/.debhelper/python3-cyvcf2/dbgsym-root/DEBIAN
cd debian/.debhelper/python3-cyvcf2/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/python3-cyvcf2/dbgsym-root/DEBIAN/md5sums
dh_builddeb -O--buildsystem=pybuild
dpkg-deb --root-owner-group --build debian/python3-cyvcf2 ..
dpkg-deb --root-owner-group --build debian/.debhelper/python3-cyvcf2/dbgsym-root ..
dpkg-deb: building package 'python3-cyvcf2-dbgsym' in '../python3-cyvcf2-dbgsym_0.31.1-2_i386.deb'.
dpkg-deb: building package 'python3-cyvcf2' in '../python3-cyvcf2_0.31.1-2_i386.deb'.
dpkg-genbuildinfo --build=binary -O../cyvcf2_0.31.1-2_i386.buildinfo
dpkg-genchanges --build=binary -O../cyvcf2_0.31.1-2_i386.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-source: info: using options from cyvcf2-0.31.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/57801 and its subdirectories
I: Current time: Mon Feb 24 08:57:21 -12 2025
I: pbuilder-time-stamp: 1740430641