I: pbuilder: network access will be disabled during build I: Current time: Fri Apr 10 15:34:14 +14 2026 I: pbuilder-time-stamp: 1775784854 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-rosettasciio_0.7.1-2.dsc] I: copying [./python-rosettasciio_0.7.1.orig.tar.gz] I: copying [./python-rosettasciio_0.7.1-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./python-rosettasciio_0.7.1-2.dsc: unsupported subcommand dpkg-source: info: extracting python-rosettasciio in python-rosettasciio-0.7.1 dpkg-source: info: unpacking python-rosettasciio_0.7.1.orig.tar.gz dpkg-source: info: unpacking python-rosettasciio_0.7.1-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/64718/tmp/hooks/D01_modify_environment starting debug: Running on ionos16-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Apr 10 01:34 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/64718/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/64718/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=21 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=f7232439c01043ec9736c643cf598e6f LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=64718 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.92gKWMFD/pbuilderrc_OvQa --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.92gKWMFD/b2 --logfile b2/build.log python-rosettasciio_0.7.1-2.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/64718/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-numpy3, dh-sequence-python3, dh-sequence-sphinxdoc, cython3, pybuild-plugin-pyproject, python3-all-dev, python3-box, python3-dask, python3-dateutil, python3-filelock, python3-h5py, python3-imageio, python3-mrcz, python3-numcodecs, python3-numpy, python3-numpydoc, python3-pint, python3-pooch, python3-pydata-sphinx-theme, python3-pytest, python3-pytest-xdist, python3-pyusid, python3-setuptools, python3-skimage, python3-sphinx, python3-sphinx-design, python3-sphinx-favicon, python3-sphinxcontrib-towncrier, python3-tifffile, python3-yaml, python3-zarr dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19769 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-numpy3; however: Package dh-sequence-numpy3 is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-sphinxdoc; however: Package dh-sequence-sphinxdoc is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-box; however: Package python3-box is not installed. pbuilder-satisfydepends-dummy depends on python3-dask; however: Package python3-dask is not installed. pbuilder-satisfydepends-dummy depends on python3-dateutil; however: Package python3-dateutil is not installed. pbuilder-satisfydepends-dummy depends on python3-filelock; however: Package python3-filelock is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-imageio; however: Package python3-imageio is not installed. pbuilder-satisfydepends-dummy depends on python3-mrcz; however: Package python3-mrcz is not installed. pbuilder-satisfydepends-dummy depends on python3-numcodecs; however: Package python3-numcodecs is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-numpydoc; however: Package python3-numpydoc is not installed. pbuilder-satisfydepends-dummy depends on python3-pint; however: Package python3-pint is not installed. pbuilder-satisfydepends-dummy depends on python3-pooch; however: Package python3-pooch is not installed. pbuilder-satisfydepends-dummy depends on python3-pydata-sphinx-theme; however: Package python3-pydata-sphinx-theme is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-xdist; however: Package python3-pytest-xdist is not installed. pbuilder-satisfydepends-dummy depends on python3-pyusid; however: Package python3-pyusid is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-skimage; however: Package python3-skimage is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-design; however: Package python3-sphinx-design is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-favicon; however: Package python3-sphinx-favicon is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinxcontrib-towncrier; however: Package python3-sphinxcontrib-towncrier is not installed. pbuilder-satisfydepends-dummy depends on python3-tifffile; however: Package python3-tifffile is not installed. pbuilder-satisfydepends-dummy depends on python3-yaml; however: Package python3-yaml is not installed. pbuilder-satisfydepends-dummy depends on python3-zarr; however: Package python3-zarr is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-lyx{a} gdb{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libbabeltrace1{a} libblas3{a} libblosc1{a} libbrotli1{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdebhelper-perl{a} libdebuginfod-common{a} libdebuginfod1t64{a} libdeflate0{a} libdw1t64{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgcrypt20{a} libgfortran5{a} libglib2.0-0t64{a} libgnutls30t64{a} libgpg-error0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-310{a} libhdf5-hl-310{a} libicu72{a} libidn2-0{a} libimagequant0{a} libipt2{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-c5{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap2{a} liblerc4{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnorm1t64{a} libopenjp2-7{a} libp11-kit0{a} libpgm-5.3-0t64{a} libpipeline1{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsnappy1v5{a} libsodium23{a} libsource-highlight-common{a} libsource-highlight4t64{a} libssh2-1t64{a} libsymspg2{a} libsz2{a} libtasn1-6{a} libtcl8.6{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} netbase{a} node-fortawesome-fontawesome-free{a} openssl{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-accessible-pygments{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-asciitree{a} python3-ase{a} python3-asttokens{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-box{a} python3-brotli{a} python3-bs4{a} python3-build{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-cloudpickle{a} python3-comm{a} python3-contourpy{a} python3-coverage{a} python3-cycler{a} python3-cytoolz{a} python3-dask{a} python3-dateutil{a} python3-debugpy{a} python3-decorator{a} python3-defusedxml{a} python3-deprecated{a} python3-dev{a} python3-distributed{a} python3-docutils{a} python3-execnet{a} python3-executing{a} python3-fasteners{a} python3-filelock{a} python3-flexcache{a} python3-flexparser{a} python3-fonttools{a} python3-fs{a} python3-fsspec{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-imageio{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-ipykernel{a} python3-ipython{a} python3-ipywidgets{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jedi{a} python3-jinja2{a} python3-joblib{a} python3-jupyter-client{a} python3-jupyter-core{a} python3-jupyterlab-widgets{a} python3-kiwisolver{a} python3-lazy-loader{a} python3-locket{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-monotonic{a} python3-more-itertools{a} python3-mpmath{a} python3-mrcz{a} python3-msgpack{a} python3-nest-asyncio{a} python3-networkx{a} python3-numcodecs{a} python3-numpy{a} python3-numpy-dev{a} python3-numpydoc{a} python3-packaging{a} python3-parso{a} python3-partd{a} python3-pexpect{a} python3-pil{a} python3-pil.imagetk{a} python3-pint{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-pooch{a} python3-prompt-toolkit{a} python3-psutil{a} python3-ptyprocess{a} python3-pure-eval{a} python3-pydata-sphinx-theme{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pytest{a} python3-pytest-xdist{a} python3-pyusid{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-sidpy{a} python3-skimage{a} python3-skimage-lib{a} python3-sklearn{a} python3-sklearn-lib{a} python3-snowballstemmer{a} python3-sortedcontainers{a} python3-soupsieve{a} python3-spglib{a} python3-sphinx{a} python3-sphinx-copybutton{a} python3-sphinx-design{a} python3-sphinx-favicon{a} python3-sphinxcontrib-towncrier{a} python3-stack-data{a} python3-sympy{a} python3-tabulate{a} python3-tblib{a} python3-threadpoolctl{a} python3-tifffile{a} python3-tk{a} python3-toml{a} python3-toolz{a} python3-tornado{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3-wheel{a} python3-widgetsnbextension{a} python3-wrapt{a} python3-yaml{a} python3-zarr{a} python3-zict{a} python3-zipp{a} python3-zmq{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} towncrier{a} tzdata{a} ucf{a} unicode-data{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl git isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libgpg-error-l10n libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-blosc python3-crc32c python3-cssselect python3-dropbox python3-gdal python3-gdbm python3-html5lib python3-libarchive-c python3-olefile python3-pandas python3-paramiko python3-pydot python3-pygit2 python3-pygraphviz python3-tqdm python3-zfpy shared-mime-info wget xdg-user-dirs 0 packages upgraded, 317 newly installed, 0 to remove and 0 not upgraded. Need to get 212 MB of archives. After unpacking 882 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libtext-charwidth-perl i386 0.04-11+b4 [9656 B] Get: 2 http://deb.debian.org/debian unstable/main i386 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get: 3 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-7 [66.0 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-7 [876 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 ucf all 3.0050 [42.7 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 libdebuginfod-common all 0.192-4 [23.7 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libpython3.13-minimal i386 3.13.2-1 [859 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 python3.13-minimal i386 3.13.2-1 [2266 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.13.2-2 [27.1 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 media-types all 12.0.0 [28.9 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 netbase all 6.4 [12.8 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 tzdata all 2025a-2 [259 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.7-1 [21.4 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-6 [69.4 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libpython3.13-stdlib i386 3.13.2-1 [1985 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 python3.13 i386 3.13.2-1 [745 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.13.2-2 [10.1 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 python3 i386 3.13.2-2 [28.1 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 python3-numpy-dev i386 1:2.2.3+ds-4 [146 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.1-2 [150 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14.2.0-17 [735 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.1-2 [2198 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 python3-numpy i386 1:2.2.3+ds-4 [5060 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 sgml-base all 1.31 [15.4 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 openssl i386 3.4.1-1 [1432 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20241223 [164 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.4-5 [96.5 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-7 [301 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-3 [862 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 libtcl8.6 i386 8.6.16+dfsg-1 [1103 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b7 [299 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.47-1 [289 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-2 [317 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-2 [402 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.10-2 [337 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.10-2 [834 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.10-1.1+b4 [28.8 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 libxft2 i386 2.3.6-1+b4 [55.3 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b3 [52.5 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+24 [217 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libxss1 i386 1:1.2.3-1+b3 [17.3 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 libtk8.6 i386 8.6.16-1 [834 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 tk8.6-blt2.5 i386 2.5.3+dfsg-8 [618 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 blt i386 2.5.3+dfsg-8 [5984 B] Get: 65 http://deb.debian.org/debian unstable/main i386 cython3 i386 3.0.11+dfsg-2+b1 [2467 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-4 [539 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 72 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-1 [458 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-6 [9582 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b2 [734 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.1 [920 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 dh-python all 6.20250306 [115 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 xml-core all 0.19 [20.1 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 fonts-lyx all 2.4.3-1 [190 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libdw1t64 i386 0.192-4 [284 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.83.5-1 [1583 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libbabeltrace1 i386 1.5.11-4+b2 [195 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libidn2-0 i386 2.3.7-2+b1 [130 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libp11-kit0 i386 0.25.5-3 [423 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libtasn1-6 i386 4.20.0-2 [51.6 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libgnutls30t64 i386 3.8.9-2 [1462 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.21.3-4 [35.0 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.2-1 [24.3 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.21.3-4 [83.7 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 98 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.21.3-4 [354 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.21.3-4 [149 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-9 [20.8 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-9 [61.2 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 libldap2 i386 2.6.9+dfsg-1 [205 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 libnghttp3-9 i386 1.8.0-1 [78.7 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 libngtcp2-16 i386 1.11.0-1 [163 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libngtcp2-crypto-gnutls8 i386 1.11.0-1 [29.9 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libpsl5t64 i386 0.21.2-1.1+b1 [57.7 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b5 [62.4 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 libssh2-1t64 i386 1.11.1-1 [256 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 libcurl3t64-gnutls i386 8.12.1-3 [411 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 libjson-c5 i386 0.18+ds-1 [48.7 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 libdebuginfod1t64 i386 0.192-4 [33.9 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 libipt2 i386 2.1.2-1 [56.8 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 libpython3.13 i386 3.13.2-1 [2199 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 libsource-highlight-common all 3.1.9-4.3 [77.5 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 libsource-highlight4t64 i386 3.1.9-4.3+b1 [357 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 gdb i386 16.2-2 [4277 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 libaec0 i386 1.1.3-1+b1 [25.0 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 libsnappy1v5 i386 1.2.1-1+b1 [31.3 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 libblosc1 i386 1.21.5+ds-1+b2 [51.4 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 libcurl4t64 i386 8.12.1-3 [415 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.23-1+b1 [48.4 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 libexpat1-dev i386 2.6.4-1 [165 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.16-1 [27.0 kB] Get: 125 http://deb.debian.org/debian unstable/main i386 libgpg-error0 i386 1.51-3 [87.3 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 libgcrypt20 i386 1.11.0-7 [799 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 10.2.0-1 [504 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 libsz2 i386 1.1.3-1+b1 [8128 B] Get: 130 http://deb.debian.org/debian unstable/main i386 libhdf5-310 i386 1.14.5+repack-3 [1327 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 libhdf5-hl-310 i386 1.14.5+repack-3 [81.6 kB] Get: 132 http://deb.debian.org/debian unstable/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3.1 [170 kB] Get: 135 http://deb.debian.org/debian unstable/main i386 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get: 136 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 libjs-sphinxdoc all 8.1.3-5 [30.5 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 libjson-perl all 4.10000-1 [87.5 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 liblbfgsb0 i386 3.0+dfsg.4-1+b2 [29.5 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 liblcms2-2 i386 2.16-2 [171 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 liblzf1 i386 3.6-4+b3 [9876 B] Get: 145 http://deb.debian.org/debian unstable/main i386 libnorm1t64 i386 1.5.9+dfsg-3.1+b2 [239 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libopenjp2-7 i386 2.5.3-1 [215 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 libpgm-5.3-0t64 i386 5.3.128~dfsg-2.1+b1 [169 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1+b1 [916 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libpython3.13-dev i386 3.13.2-1 [5181 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 libpython3-dev i386 3.13.2-2 [10.3 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 libpython3-all-dev i386 3.13.2-2 [1068 B] Get: 152 http://deb.debian.org/debian unstable/main i386 libqhull-r8.0 i386 2020.2-6+b2 [259 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 libraqm0 i386 0.10.2-1 [14.6 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.5.0-0.1 [115 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 libsodium23 i386 1.0.18-1+b2 [186 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 libsymspg2 i386 2.5.0-2+b2 [204 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.5.0-0.1 [329 kB] Get: 158 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.5.1+git230720-5 [339 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 libwebpdemux2 i386 1.5.0-0.1 [114 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 libwebpmux3 i386 1.5.0-0.1 [127 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 libxslt1.1 i386 1.1.35-1.1+b1 [243 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 libyaml-0-2 i386 0.2.5-2 [55.8 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 libzmq5 i386 4.3.5-1+b3 [308 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 node-fortawesome-fontawesome-free all 6.7.2+ds1-1 [1521 kB] Get: 165 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-1 [55.3 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 python3-toml all 0.10.2-1 [16.2 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 python3-wheel all 0.45.1-1 [56.7 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 python3-build all 1.2.2-1 [36.0 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 pybuild-plugin-pyproject all 6.20250306 [11.6 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 python-babel-localedata all 2.17.0-1 [6050 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 python-matplotlib-data all 3.8.3-7 [2735 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get: 175 http://deb.debian.org/debian unstable/main i386 python3-accessible-pygments all 0.0.5-2 [1306 kB] Get: 176 http://deb.debian.org/debian unstable/main i386 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 python3-all i386 3.13.2-2 [1044 B] Get: 178 http://deb.debian.org/debian unstable/main i386 python3.13-dev i386 3.13.2-1 [505 kB] Get: 179 http://deb.debian.org/debian unstable/main i386 python3-dev i386 3.13.2-2 [26.1 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 python3-all-dev i386 3.13.2-2 [1068 B] Get: 181 http://deb.debian.org/debian unstable/main i386 python3-asciitree all 0.3.3-4 [5612 B] Get: 182 http://deb.debian.org/debian unstable/main i386 python3-decorator all 5.1.1-5 [15.1 kB] Get: 183 http://deb.debian.org/debian unstable/main i386 python3-scipy i386 1.14.1-4+b1 [17.0 MB] Get: 184 http://deb.debian.org/debian unstable/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 185 http://deb.debian.org/debian unstable/main i386 python3-spglib i386 2.5.0-2+b2 [53.5 kB] Get: 186 http://deb.debian.org/debian unstable/main i386 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 187 http://deb.debian.org/debian unstable/main i386 python3-pil i386 11.1.0-5+b1 [518 kB] Get: 188 http://deb.debian.org/debian unstable/main i386 python3.13-tk i386 3.13.2-1 [104 kB] Get: 189 http://deb.debian.org/debian unstable/main i386 python3-tk i386 3.13.2-1 [9516 B] Get: 190 http://deb.debian.org/debian unstable/main i386 python3-pil.imagetk i386 11.1.0-5+b1 [81.9 kB] Get: 191 http://deb.debian.org/debian unstable/main i386 python3-pyparsing all 3.1.2-1 [146 kB] Get: 192 http://deb.debian.org/debian unstable/main i386 python3-contourpy i386 1.3.1-1+b1 [223 kB] Get: 193 http://deb.debian.org/debian unstable/main i386 python3-cycler all 0.12.1-1 [9496 B] Get: 194 http://deb.debian.org/debian unstable/main i386 python3-brotli i386 1.1.0-2+b7 [318 kB] Get: 195 http://deb.debian.org/debian unstable/main i386 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 196 http://deb.debian.org/debian unstable/main i386 python3-fs all 2.4.16-7 [95.2 kB] Get: 197 http://deb.debian.org/debian unstable/main i386 python3-lxml i386 5.3.1-1+b1 [1257 kB] Get: 198 http://deb.debian.org/debian unstable/main i386 python3-lz4 i386 4.4.0+dfsg-1+b1 [25.5 kB] Get: 199 http://deb.debian.org/debian unstable/main i386 python3-mpmath all 1.3.0-1 [419 kB] Get: 200 http://deb.debian.org/debian unstable/main i386 python3-sympy all 1.13.3-5 [4148 kB] Get: 201 http://deb.debian.org/debian unstable/main i386 python3-attr all 25.1.0-1 [68.7 kB] Get: 202 http://deb.debian.org/debian unstable/main i386 python3-ufolib2 all 0.17.0+dfsg1-1 [33.0 kB] Get: 203 http://deb.debian.org/debian unstable/main i386 unicode-data all 15.1.0-1 [8547 kB] Get: 204 http://deb.debian.org/debian unstable/main i386 python3-fonttools i386 4.55.3-2+b1 [1442 kB] Get: 205 http://deb.debian.org/debian unstable/main i386 python3-kiwisolver i386 1.4.7-3+b1 [69.7 kB] Get: 206 http://deb.debian.org/debian unstable/main i386 python3-matplotlib i386 3.8.3-7+b1 [23.0 MB] Get: 207 http://deb.debian.org/debian unstable/main i386 python3-ase all 3.24.0-1 [1730 kB] Get: 208 http://deb.debian.org/debian unstable/main i386 python3-asttokens all 3.0.0-1 [20.1 kB] Get: 209 http://deb.debian.org/debian unstable/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 210 http://deb.debian.org/debian unstable/main i386 python3-babel all 2.17.0-1 [117 kB] Get: 211 http://deb.debian.org/debian unstable/main i386 python3-yaml i386 6.0.2-1+b2 [135 kB] Get: 212 http://deb.debian.org/debian unstable/main i386 python3-box i386 7.3.2-1+b1 [696 kB] Get: 213 http://deb.debian.org/debian unstable/main i386 python3-soupsieve all 2.6-1 [38.3 kB] Get: 214 http://deb.debian.org/debian unstable/main i386 python3-bs4 all 4.13.3-1 [166 kB] Get: 215 http://deb.debian.org/debian unstable/main i386 python3-certifi all 2025.1.31+ds-1 [9652 B] Get: 216 http://deb.debian.org/debian unstable/main i386 python3-cffi-backend i386 1.17.1-2+b2 [96.5 kB] Get: 217 http://deb.debian.org/debian unstable/main i386 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 218 http://deb.debian.org/debian unstable/main i386 python3-charset-normalizer i386 3.4.1-1+b1 [127 kB] Get: 219 http://deb.debian.org/debian unstable/main i386 python3-click all 8.2.0+0.really.8.1.8-1 [95.4 kB] Get: 220 http://deb.debian.org/debian unstable/main i386 python3-cloudpickle all 3.1.1-1 [26.6 kB] Get: 221 http://deb.debian.org/debian unstable/main i386 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 222 http://deb.debian.org/debian unstable/main i386 python3-comm all 0.2.1-1 [8104 B] Get: 223 http://deb.debian.org/debian unstable/main i386 python3-coverage i386 7.6.0+dfsg1-2+b2 [176 kB] Get: 224 http://deb.debian.org/debian unstable/main i386 python3-toolz all 1.0.0-2 [44.2 kB] Get: 225 http://deb.debian.org/debian unstable/main i386 python3-cytoolz i386 1.0.1-1+b1 [299 kB] Get: 226 http://deb.debian.org/debian unstable/main i386 python3-fsspec all 2025.2.0-1 [211 kB] Get: 227 http://deb.debian.org/debian unstable/main i386 python3-locket all 1.0.0-2 [5820 B] Get: 228 http://deb.debian.org/debian unstable/main i386 python3-partd all 1.4.2-1 [15.4 kB] Get: 229 http://deb.debian.org/debian unstable/main i386 python3-dask all 2024.12.1+dfsg-2 [984 kB] Get: 230 http://deb.debian.org/debian unstable/main i386 python3-debugpy i386 1.8.8+ds-2 [1066 kB] Get: 231 http://deb.debian.org/debian unstable/main i386 python3-defusedxml all 0.7.1-3 [43.4 kB] Get: 232 http://deb.debian.org/debian unstable/main i386 python3-wrapt i386 1.15.0-4+b1 [44.2 kB] Get: 233 http://deb.debian.org/debian unstable/main i386 python3-deprecated all 1.2.18-1 [14.8 kB] Get: 234 http://deb.debian.org/debian unstable/main i386 python3-markupsafe i386 2.1.5-1+b3 [14.0 kB] Get: 235 http://deb.debian.org/debian unstable/main i386 python3-jinja2 all 3.1.5-2 [107 kB] Get: 236 http://deb.debian.org/debian unstable/main i386 python3-msgpack i386 1.0.3-3+b4 [86.1 kB] Get: 237 http://deb.debian.org/debian unstable/main i386 python3-psutil i386 5.9.8-2 [226 kB] Get: 238 http://deb.debian.org/debian unstable/main i386 python3-sortedcontainers all 2.4.0-2 [31.9 kB] Get: 239 http://deb.debian.org/debian unstable/main i386 python3-tblib all 3.0.0-6 [13.8 kB] Get: 240 http://deb.debian.org/debian unstable/main i386 python3-tornado i386 6.4.2-1 [349 kB] Get: 241 http://deb.debian.org/debian unstable/main i386 python3-urllib3 all 2.3.0-1 [114 kB] Get: 242 http://deb.debian.org/debian unstable/main i386 python3-zict all 3.0.0-2 [29.7 kB] Get: 243 http://deb.debian.org/debian unstable/main i386 python3-distributed all 2024.12.1+ds-1 [1162 kB] Get: 244 http://deb.debian.org/debian unstable/main i386 python3-roman all 5.0-1 [10.6 kB] Get: 245 http://deb.debian.org/debian unstable/main i386 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 246 http://deb.debian.org/debian unstable/main i386 python3-execnet all 2.1.1-1 [40.2 kB] Get: 247 http://deb.debian.org/debian unstable/main i386 python3-executing all 2.2.0-0.1 [24.5 kB] Get: 248 http://deb.debian.org/debian unstable/main i386 python3-monotonic all 1.6-3 [5340 B] Get: 249 http://deb.debian.org/debian unstable/main i386 python3-fasteners all 0.18-2 [14.0 kB] Get: 250 http://deb.debian.org/debian unstable/main i386 python3-filelock all 3.17.0-1 [12.7 kB] Get: 251 http://deb.debian.org/debian unstable/main i386 python3-flexcache all 0.3-2 [13.5 kB] Get: 252 http://deb.debian.org/debian unstable/main i386 python3-flexparser all 0.4-1 [42.9 kB] Get: 253 http://deb.debian.org/debian unstable/main i386 python3-h5py-serial i386 3.13.0-1+b1 [1031 kB] Get: 254 http://deb.debian.org/debian unstable/main i386 python3-h5py all 3.13.0-1 [15.0 kB] Get: 255 http://deb.debian.org/debian unstable/main i386 python3-idna all 3.10-1 [42.0 kB] Get: 256 http://deb.debian.org/debian unstable/main i386 python3-imageio all 2.37.0-1 [229 kB] Get: 257 http://deb.debian.org/debian unstable/main i386 python3-imagesize all 1.4.1-1 [6688 B] Get: 258 http://deb.debian.org/debian unstable/main i386 python3-more-itertools all 10.6.0-1 [65.3 kB] Get: 259 http://deb.debian.org/debian unstable/main i386 python3-typeguard all 4.4.2-1 [37.3 kB] Get: 260 http://deb.debian.org/debian unstable/main i386 python3-inflect all 7.3.1-2 [32.4 kB] Get: 261 http://deb.debian.org/debian unstable/main i386 python3-iniconfig all 1.1.1-2 [6396 B] Get: 262 http://deb.debian.org/debian unstable/main i386 python3-parso all 0.8.4-1 [67.8 kB] Get: 263 http://deb.debian.org/debian unstable/main i386 python3-typeshed all 0.0~git20241223.ea91db2-1 [1530 kB] Get: 264 http://deb.debian.org/debian unstable/main i386 python3-jedi all 0.19.1+ds1-1 [691 kB] Get: 265 http://deb.debian.org/debian unstable/main i386 python3-matplotlib-inline all 0.1.6-2 [8652 B] Get: 266 http://deb.debian.org/debian unstable/main i386 python3-wcwidth all 0.2.13+dfsg1-1 [24.9 kB] Get: 267 http://deb.debian.org/debian unstable/main i386 python3-prompt-toolkit all 3.0.50-1 [278 kB] Get: 268 http://deb.debian.org/debian unstable/main i386 python3-pure-eval all 0.2.3-1 [11.2 kB] Get: 269 http://deb.debian.org/debian unstable/main i386 python3-stack-data all 0.6.3-1 [21.6 kB] Get: 270 http://deb.debian.org/debian unstable/main i386 python3-ptyprocess all 0.7.0-6 [14.5 kB] Get: 271 http://deb.debian.org/debian unstable/main i386 python3-pexpect all 4.9-3 [55.6 kB] Get: 272 http://deb.debian.org/debian unstable/main i386 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 273 http://deb.debian.org/debian unstable/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 274 http://deb.debian.org/debian unstable/main i386 python3-pkg-resources all 75.8.0-1 [222 kB] Get: 275 http://deb.debian.org/debian unstable/main i386 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 276 http://deb.debian.org/debian unstable/main i386 python3-zipp all 3.21.0-1 [10.6 kB] Get: 277 http://deb.debian.org/debian unstable/main i386 python3-setuptools all 75.8.0-1 [724 kB] Get: 278 http://deb.debian.org/debian unstable/main i386 python3-ipython all 8.30.0-2 [568 kB] Get: 279 http://deb.debian.org/debian unstable/main i386 python3-jupyter-core all 5.7.2-5 [35.3 kB] Get: 280 http://deb.debian.org/debian unstable/main i386 python3-zmq i386 26.2.1-1+b1 [181 kB] Get: 281 http://deb.debian.org/debian unstable/main i386 python3-jupyter-client all 8.6.3-2 [92.4 kB] Get: 282 http://deb.debian.org/debian unstable/main i386 python3-nest-asyncio all 1.5.4-1 [6248 B] Get: 283 http://deb.debian.org/debian unstable/main i386 python3-ipykernel all 6.29.5-2 [102 kB] Get: 284 http://deb.debian.org/debian unstable/main i386 python3-widgetsnbextension all 8.1.5-4 [851 kB] Get: 285 http://deb.debian.org/debian unstable/main i386 python3-jupyterlab-widgets all 8.1.5-4 [171 kB] Get: 286 http://deb.debian.org/debian unstable/main i386 python3-ipywidgets all 8.1.5-4 [105 kB] Get: 287 http://deb.debian.org/debian unstable/main i386 python3-joblib all 1.4.2-3 [216 kB] Get: 288 http://deb.debian.org/debian unstable/main i386 python3-lazy-loader all 0.4-1 [13.5 kB] Get: 289 http://deb.debian.org/debian unstable/main i386 python3-mrcz all 0.5.7-2 [35.7 kB] Get: 290 http://deb.debian.org/debian unstable/main i386 python3-networkx all 3.2.1-5 [13.0 MB] Get: 291 http://deb.debian.org/debian unstable/main i386 sphinx-common all 8.1.3-5 [617 kB] Get: 292 http://deb.debian.org/debian unstable/main i386 python3-requests all 2.32.3+dfsg-4 [72.1 kB] Get: 293 http://deb.debian.org/debian unstable/main i386 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 294 http://deb.debian.org/debian unstable/main i386 python3-sphinx all 8.1.3-5 [468 kB] Get: 295 http://deb.debian.org/debian unstable/main i386 python3-pydata-sphinx-theme all 0.16.1+dfsg-3 [917 kB] Get: 296 http://deb.debian.org/debian unstable/main i386 python3-numcodecs i386 0.15.1+ds-1+b1 [387 kB] Get: 297 http://deb.debian.org/debian unstable/main i386 python3-tabulate all 0.9.0-1 [45.9 kB] Get: 298 http://deb.debian.org/debian unstable/main i386 python3-numpydoc all 1.8.0-1 [51.4 kB] Get: 299 http://deb.debian.org/debian unstable/main i386 python3-pint all 0.24.4-1 [225 kB] Get: 300 http://deb.debian.org/debian unstable/main i386 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 301 http://deb.debian.org/debian unstable/main i386 python3-pooch all 1.8.2-1 [58.4 kB] Get: 302 http://deb.debian.org/debian unstable/main i386 python3-pytest all 8.3.4-1 [250 kB] Get: 303 http://deb.debian.org/debian unstable/main i386 python3-pytest-xdist all 3.6.1-1 [44.4 kB] Get: 304 http://deb.debian.org/debian unstable/main i386 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 305 http://deb.debian.org/debian unstable/main i386 python3-sklearn-lib i386 1.4.2+dfsg-7+b3 [3553 kB] Get: 306 http://deb.debian.org/debian unstable/main i386 python3-sklearn all 1.4.2+dfsg-7 [2248 kB] Get: 307 http://deb.debian.org/debian unstable/main i386 python3-sidpy all 0.12.3-3 [76.9 kB] Get: 308 http://deb.debian.org/debian unstable/main i386 python3-pyusid all 0.0.12-2 [54.1 kB] Get: 309 http://deb.debian.org/debian unstable/main i386 python3-skimage-lib i386 0.25.2-1+b1 [2223 kB] Get: 310 http://deb.debian.org/debian unstable/main i386 python3-tifffile all 20250218-1 [185 kB] Get: 311 http://deb.debian.org/debian unstable/main i386 python3-skimage all 0.25.2-1 [20.6 MB] Get: 312 http://deb.debian.org/debian unstable/main i386 python3-sphinx-copybutton all 0.5.2-2 [17.9 kB] Get: 313 http://deb.debian.org/debian unstable/main i386 python3-sphinx-design all 0.6.1-1 [883 kB] Get: 314 http://deb.debian.org/debian unstable/main i386 python3-sphinx-favicon all 1.0.1-4 [9116 B] Get: 315 http://deb.debian.org/debian unstable/main i386 towncrier all 24.8.0-2 [57.2 kB] Get: 316 http://deb.debian.org/debian unstable/main i386 python3-sphinxcontrib-towncrier all 0.4.0a0-3 [11.2 kB] Get: 317 http://deb.debian.org/debian unstable/main i386 python3-zarr all 2.18.4+ds-3 [1940 kB] Fetched 212 MB in 12s (17.8 MB/s) Preconfiguring packages ... Selecting previously unselected package libtext-charwidth-perl:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19769 files and directories currently installed.) Preparing to unpack .../0-libtext-charwidth-perl_0.04-11+b4_i386.deb ... Unpacking libtext-charwidth-perl:i386 (0.04-11+b4) ... Selecting previously unselected package libtext-wrapi18n-perl. Preparing to unpack .../1-libtext-wrapi18n-perl_0.06-10_all.deb ... Unpacking libtext-wrapi18n-perl (0.06-10) ... 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Selecting previously unselected package libexpat1:i386. Preparing to unpack .../8-libexpat1_2.6.4-1_i386.deb ... Unpacking libexpat1:i386 (2.6.4-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../9-python3.13-minimal_3.13.2-1_i386.deb ... Unpacking python3.13-minimal (3.13.2-1) ... Setting up libpython3.13-minimal:i386 (3.13.2-1) ... Setting up libexpat1:i386 (2.6.4-1) ... Setting up python3.13-minimal (3.13.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20374 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.2-2_i386.deb ... Unpacking python3-minimal (3.13.2-2) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_12.0.0_all.deb ... Unpacking media-types (12.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... 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Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:i386. Preparing to unpack .../7-libpython3.13-stdlib_3.13.2-1_i386.deb ... Unpacking libpython3.13-stdlib:i386 (3.13.2-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.2-1_i386.deb ... Unpacking python3.13 (3.13.2-1) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../9-libpython3-stdlib_3.13.2-2_i386.deb ... Unpacking libpython3-stdlib:i386 (3.13.2-2) ... Setting up python3-minimal (3.13.2-2) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21384 files and directories currently installed.) Preparing to unpack .../000-python3_3.13.2-2_i386.deb ... Unpacking python3 (3.13.2-2) ... Selecting previously unselected package python3-numpy-dev:i386. Preparing to unpack .../001-python3-numpy-dev_1%3a2.2.3+ds-4_i386.deb ... Unpacking python3-numpy-dev:i386 (1:2.2.3+ds-4) ... Selecting previously unselected package libblas3:i386. Preparing to unpack .../002-libblas3_3.12.1-2_i386.deb ... Unpacking libblas3:i386 (3.12.1-2) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../003-libgfortran5_14.2.0-17_i386.deb ... Unpacking libgfortran5:i386 (14.2.0-17) ... Selecting previously unselected package liblapack3:i386. Preparing to unpack .../004-liblapack3_3.12.1-2_i386.deb ... Unpacking liblapack3:i386 (3.12.1-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../005-python3-numpy_1%3a2.2.3+ds-4_i386.deb ... Unpacking python3-numpy (1:2.2.3+ds-4) ... Selecting previously unselected package sgml-base. Preparing to unpack .../006-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package openssl. 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Preparing to unpack .../013-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../014-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../015-bsdextrautils_2.40.4-5_i386.deb ... Unpacking bsdextrautils (2.40.4-5) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../016-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../017-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../018-m4_1.4.19-7_i386.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../019-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... 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Setting up python3-execnet (2.1.1-1) ... Setting up python3-zict (3.0.0-2) ... Setting up python3-locket (1.0.0-2) ... Setting up python3-soupsieve (2.6-1) ... Setting up python3-deprecated (1.2.18-1) ... Setting up python3-jupyter-core (5.7.2-5) ... Setting up libngtcp2-crypto-gnutls8:i386 (1.11.0-1) ... Setting up python3-cffi-backend:i386 (1.17.1-2+b2) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-cytoolz (1.0.1-1+b1) ... /usr/lib/python3/dist-packages/cytoolz/tests/test_inspect_args.py:505: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? assert num_required_args(Wrapped) is 1 Setting up python3-ptyprocess (0.7.0-6) ... Setting up python3-widgetsnbextension (8.1.5-4) ... Setting up python3-prompt-toolkit (3.0.50-1) ... Setting up dh-python (6.20250306) ... Setting up python3-partd (1.4.2-1) ... Setting up python3-more-itertools (10.6.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-5) ... 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Setting up python3.13-dev (3.13.2-1) ... Setting up python3-pytest (8.3.4-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up blt (2.5.3+dfsg-8) ... Setting up python3-fsspec (2025.2.0-1) ... Setting up python3-typeguard (4.4.2-1) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up towncrier (24.8.0-2) ... Setting up libcurl3t64-gnutls:i386 (8.12.1-3) ... Setting up python3-sklearn-lib:i386 (1.4.2+dfsg-7+b3) ... Setting up python3-tabulate (0.9.0-1) ... Setting up python3-all (3.13.2-2) ... Setting up python3-coverage (7.6.0+dfsg1-2+b2) ... Setting up python3-yaml (6.0.2-1+b2) ... Setting up python3-tk:i386 (3.13.2-1) ... Setting up debhelper (13.24.1) ... Setting up python3-tifffile (20250218-1) ... Setting up python3-bs4 (4.13.3-1) ... Setting up python3-matplotlib-inline (0.1.6-2) ... Setting up python3-comm (0.2.1-1) ... Setting up python3-pil:i386 (11.1.0-5+b1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-flexparser (0.4-1) ... Setting up python3-pil.imagetk:i386 (11.1.0-5+b1) ... Setting up python3-executing (2.2.0-0.1) ... Setting up libpython3-all-dev:i386 (3.13.2-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pexpect (4.9-3) ... Setting up python3-zmq (26.2.1-1+b1) ... Setting up python3-dev (3.13.2-2) ... Setting up python3-requests (2.32.3+dfsg-4) ... Setting up python3-sklearn (1.4.2+dfsg-7) ... Setting up libhdf5-310:i386 (1.14.5+repack-3) ... Setting up python3-box (7.3.2-1+b1) ... Setting up python3-jupyter-client (8.6.3-2) ... Setting up python3-stack-data (0.6.3-1) ... Setting up python3-imageio (2.37.0-1) ... Setting up python3-pkg-resources (75.8.0-1) ... Setting up python3-all-dev (3.13.2-2) ... Setting up libhdf5-hl-310:i386 (1.14.5+repack-3) ... Setting up libdebuginfod1t64:i386 (0.192-4) ... Setting up python3-setuptools (75.8.0-1) ... Setting up python3-pytest-xdist (3.6.1-1) ... Setting up python3-jedi (0.19.1+ds1-1) ... Setting up python3-dask (2024.12.1+dfsg-2) ... Setting up python3-h5py-serial (3.13.0-1+b1) ... Setting up python3-networkx (3.2.1-5) ... Setting up python3-pint (0.24.4-1) ... Setting up python3-distributed (2024.12.1+ds-1) ... Setting up gdb (16.2-2) ... Setting up python3-pooch (1.8.2-1) ... Setting up python3-ipython (8.30.0-2) ... Setting up python3-h5py (3.13.0-1) ... Setting up python3-mrcz (0.5.7-2) ... /usr/lib/python3/dist-packages/mrcz/ReliablePy.py:362: SyntaxWarning: invalid escape sequence '\A' plt.xlabel( "Resolution ($\AA^{-1}$)" ) /usr/lib/python3/dist-packages/mrcz/ReliablePy.py:385: SyntaxWarning: invalid escape sequence '\A' plt.xlabel( "Resolution ($\AA^{-1}$)" ) /usr/lib/python3/dist-packages/mrcz/ReliablePy.py:537: SyntaxWarning: invalid escape sequence '\A' plt.xlabel( "Defocus ($\AA$)" ) /usr/lib/python3/dist-packages/mrcz/ReliablePy.py:830: SyntaxWarning: invalid escape sequence '\A' plt.xlabel( "Defocus, $C_1 (\AA)$" ) /usr/lib/python3/dist-packages/mrcz/ReliablePy.py:836: SyntaxWarning: invalid escape sequence '\A' plt.xlabel( "Astigmatism, $A_1 (\AA)$" ) /usr/lib/python3/dist-packages/mrcz/ReliablePy.py:848: SyntaxWarning: invalid escape sequence '\A' plt.xlabel( "Fitted Resolution, $r (\AA)$" ) /usr/lib/python3/dist-packages/mrcz/ioMRC.py:219: SyntaxWarning: invalid escape sequence '\m' ''' /usr/lib/python3/dist-packages/mrcz/ioMRC.py:555: SyntaxWarning: invalid escape sequence '\A' if header['pixelunits'] == u'\\AA' or header['pixelunits'] == u'\AA': /usr/lib/python3/dist-packages/mrcz/ioMRC.py:557: SyntaxWarning: invalid escape sequence '\m' elif header['pixelunits'] == u'\mum': /usr/lib/python3/dist-packages/mrcz/ioMRC.py:605: SyntaxWarning: invalid escape sequence '\m' ''' /usr/lib/python3/dist-packages/mrcz/ioMRC.py:1050: SyntaxWarning: invalid escape sequence '\A' if header['pixelunits'] == '\\AA' or header['pixelunits'] == '\AA': /usr/lib/python3/dist-packages/mrcz/ioMRC.py:1052: SyntaxWarning: invalid escape sequence '\m' elif header['pixelunits'] == '\mum': /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:66: SyntaxWarning: invalid escape sequence '\A' pixelsize=pixelsize, pixelunits=u'\AA', /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:70: SyntaxWarning: invalid escape sequence '\A' rereadMage, rereadHeader = mrcz.readMRC(mrcName, pixelunits=u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:77: SyntaxWarning: invalid escape sequence '\A' assert(rereadHeader['pixelunits'] == u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:149: SyntaxWarning: invalid escape sequence '\A' pixelsize=pixelsize, pixelunits=u'\AA', /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:153: SyntaxWarning: invalid escape sequence '\A' rereadMage, rereadHeader = mrcz.readMRC(mrcName, pixelunits=u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:166: SyntaxWarning: invalid escape sequence '\A' assert(rereadHeader['pixelunits'] == u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:178: SyntaxWarning: invalid escape sequence '\A' pixelsize=pixelsize, pixelunits=u'\AA', /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:184: SyntaxWarning: invalid escape sequence '\A' worker = mrcz.asyncReadMRC(mrcName, pixelunits=u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:198: SyntaxWarning: invalid escape sequence '\A' assert(rereadHeader['pixelunits'] == u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:211: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:232: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:251: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:271: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:293: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA', slices=slices) /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:311: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA', slices=slices) /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:447: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:487: SyntaxWarning: invalid escape sequence '\A' pixelsize=pixelsize, pixelunits=u'\AA', /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:494: SyntaxWarning: invalid escape sequence '\A' rereadMage, rereadHeader = mrcz.readMRC(mrcOutput, pixelunits=u'\AA') /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:505: SyntaxWarning: invalid escape sequence '\A' npt.assert_array_equal(rereadHeader['pixelunits'], u'\AA') Setting up python3-ipywidgets (8.1.5-4) ... /usr/lib/python3/dist-packages/ipywidgets/widgets/tests/test_traits.py:61: SyntaxWarning: invalid escape sequence '\.' 'var(--my-color-\.)', # CSS variable with escaped characters Setting up python3-debugpy (1.8.8+ds-2) ... Setting up python3-ipykernel (6.29.5-2) ... Setting up python3-fonttools (4.55.3-2+b1) ... Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... Setting up python3-matplotlib (3.8.3-7+b1) ... Setting up python3-ase (3.24.0-1) ... Setting up python3-skimage (0.25.2-1) ... Setting up python3-sidpy (0.12.3-3) ... Setting up python3-pyusid (0.0.12-2) ... Processing triggers for libc-bin (2.41-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (8.1.3-5) ... Setting up python3-sphinx-copybutton (0.5.2-2) ... Setting up python3-sphinx-favicon (1.0.1-4) ... Setting up python3-sphinx-design (0.6.1-1) ... Setting up python3-numpydoc (1.8.0-1) ... Setting up python3-pydata-sphinx-theme (0.16.1+dfsg-3) ... Setting up python3-sphinxcontrib-towncrier (0.4.0a0-3) ... Setting up python3-numcodecs (0.15.1+ds-1+b1) ... Setting up python3-zarr (2.18.4+ds-3) ... Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/64718/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/64718/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/python-rosettasciio-0.7.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-rosettasciio_0.7.1-2_source.changes dpkg-buildpackage: info: source package python-rosettasciio dpkg-buildpackage: info: source version 0.7.1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Picca Frédéric-Emmanuel dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 dpkg-source: info: using options from python-rosettasciio-0.7.1/debian/source/options: --extend-diff-ignore=^[^/]+.(egg-info|dist-info)/ debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/python-rosettasciio-0.7.1/.pybuild/cpython3_3.13_rosettasciio * Building wheel... Compiling rsciio/bruker/unbcf_fast.pyx because it changed. [1/1] Cythonizing rsciio/bruker/unbcf_fast.pyx running bdist_wheel running build running build_py creating build/lib/rsciio copying rsciio/_docstrings.py -> build/lib/rsciio copying rsciio/_hierarchical.py -> build/lib/rsciio copying rsciio/_logger.py -> build/lib/rsciio copying rsciio/__init__.py -> build/lib/rsciio creating build/lib/rsciio/protochips copying rsciio/protochips/_api.py -> build/lib/rsciio/protochips copying rsciio/protochips/__init__.py -> build/lib/rsciio/protochips creating build/lib/rsciio/phenom copying rsciio/phenom/_api.py -> build/lib/rsciio/phenom copying rsciio/phenom/__init__.py -> build/lib/rsciio/phenom creating build/lib/rsciio/tia copying rsciio/tia/_api.py -> build/lib/rsciio/tia copying rsciio/tia/__init__.py -> build/lib/rsciio/tia creating build/lib/rsciio/msa copying rsciio/msa/_api.py -> build/lib/rsciio/msa copying rsciio/msa/__init__.py -> build/lib/rsciio/msa creating build/lib/rsciio/zspy copying rsciio/zspy/_api.py -> build/lib/rsciio/zspy copying rsciio/zspy/__init__.py -> build/lib/rsciio/zspy creating build/lib/rsciio/digitalsurf copying rsciio/digitalsurf/_api.py -> build/lib/rsciio/digitalsurf copying rsciio/digitalsurf/__init__.py -> build/lib/rsciio/digitalsurf creating build/lib/rsciio/jeol copying rsciio/jeol/_api.py -> build/lib/rsciio/jeol copying rsciio/jeol/__init__.py -> build/lib/rsciio/jeol creating build/lib/rsciio/mrcz copying rsciio/mrcz/_api.py -> build/lib/rsciio/mrcz copying rsciio/mrcz/__init__.py -> build/lib/rsciio/mrcz creating build/lib/rsciio/impulse copying rsciio/impulse/_api.py -> build/lib/rsciio/impulse copying rsciio/impulse/__init__.py -> build/lib/rsciio/impulse creating build/lib/rsciio/edax copying rsciio/edax/_api.py -> build/lib/rsciio/edax copying rsciio/edax/__init__.py -> build/lib/rsciio/edax creating build/lib/rsciio/usid copying rsciio/usid/_api.py -> build/lib/rsciio/usid copying rsciio/usid/__init__.py -> build/lib/rsciio/usid creating build/lib/rsciio/hspy copying rsciio/hspy/_api.py -> build/lib/rsciio/hspy copying rsciio/hspy/__init__.py -> build/lib/rsciio/hspy creating build/lib/rsciio/jobinyvon copying rsciio/jobinyvon/_api.py -> build/lib/rsciio/jobinyvon copying rsciio/jobinyvon/__init__.py -> build/lib/rsciio/jobinyvon creating build/lib/rsciio/image copying rsciio/image/_api.py -> build/lib/rsciio/image copying rsciio/image/__init__.py -> build/lib/rsciio/image creating build/lib/rsciio/semper copying rsciio/semper/_api.py -> build/lib/rsciio/semper copying rsciio/semper/__init__.py -> build/lib/rsciio/semper creating build/lib/rsciio/mrc copying rsciio/mrc/_api.py -> build/lib/rsciio/mrc copying rsciio/mrc/__init__.py -> build/lib/rsciio/mrc creating build/lib/rsciio/renishaw copying rsciio/renishaw/_api.py -> build/lib/rsciio/renishaw copying rsciio/renishaw/__init__.py -> build/lib/rsciio/renishaw creating build/lib/rsciio/pantarhei copying rsciio/pantarhei/_api.py -> build/lib/rsciio/pantarhei copying rsciio/pantarhei/__init__.py -> build/lib/rsciio/pantarhei creating build/lib/rsciio/nexus copying rsciio/nexus/_api.py -> build/lib/rsciio/nexus copying rsciio/nexus/__init__.py -> build/lib/rsciio/nexus creating build/lib/rsciio/emd copying rsciio/emd/_api.py -> build/lib/rsciio/emd copying rsciio/emd/__init__.py -> build/lib/rsciio/emd copying rsciio/emd/_emd_velox.py -> build/lib/rsciio/emd copying rsciio/emd/_emd_ncem.py -> build/lib/rsciio/emd creating build/lib/rsciio/tiff copying rsciio/tiff/_api.py -> build/lib/rsciio/tiff copying rsciio/tiff/__init__.py -> build/lib/rsciio/tiff creating build/lib/rsciio/ripple copying rsciio/ripple/_api.py -> build/lib/rsciio/ripple copying rsciio/ripple/__init__.py -> build/lib/rsciio/ripple creating build/lib/rsciio/tvips copying rsciio/tvips/_api.py -> build/lib/rsciio/tvips copying rsciio/tvips/__init__.py -> build/lib/rsciio/tvips creating build/lib/rsciio/utils copying rsciio/utils/rgb_tools.py -> build/lib/rsciio/utils copying rsciio/utils/skimage_exposure.py -> build/lib/rsciio/utils copying rsciio/utils/elements.py -> build/lib/rsciio/utils copying rsciio/utils/tools.py -> build/lib/rsciio/utils copying rsciio/utils/exceptions.py -> build/lib/rsciio/utils copying rsciio/utils/tests.py -> build/lib/rsciio/utils copying rsciio/utils/fei_stream_readers.py -> build/lib/rsciio/utils copying rsciio/utils/__init__.py -> build/lib/rsciio/utils copying rsciio/utils/distributed.py -> build/lib/rsciio/utils copying rsciio/utils/image.py -> build/lib/rsciio/utils copying rsciio/utils/date_time_tools.py -> build/lib/rsciio/utils copying rsciio/utils/array.py -> build/lib/rsciio/utils copying rsciio/utils/readfile.py -> build/lib/rsciio/utils copying rsciio/utils/hdf5.py -> build/lib/rsciio/utils creating build/lib/rsciio/netcdf copying rsciio/netcdf/_api.py -> build/lib/rsciio/netcdf copying rsciio/netcdf/__init__.py -> build/lib/rsciio/netcdf creating build/lib/rsciio/trivista copying rsciio/trivista/_api.py -> build/lib/rsciio/trivista copying rsciio/trivista/__init__.py -> build/lib/rsciio/trivista creating build/lib/rsciio/hamamatsu copying rsciio/hamamatsu/_api.py -> build/lib/rsciio/hamamatsu copying rsciio/hamamatsu/__init__.py -> build/lib/rsciio/hamamatsu creating build/lib/rsciio/blockfile copying rsciio/blockfile/_api.py -> build/lib/rsciio/blockfile copying rsciio/blockfile/__init__.py -> build/lib/rsciio/blockfile creating build/lib/rsciio/bruker copying rsciio/bruker/_api.py -> build/lib/rsciio/bruker copying rsciio/bruker/__init__.py -> build/lib/rsciio/bruker creating build/lib/rsciio/quantumdetector copying rsciio/quantumdetector/_api.py -> build/lib/rsciio/quantumdetector copying rsciio/quantumdetector/__init__.py -> build/lib/rsciio/quantumdetector creating build/lib/rsciio/dens copying rsciio/dens/_api.py -> build/lib/rsciio/dens copying rsciio/dens/__init__.py -> build/lib/rsciio/dens creating build/lib/rsciio/delmic copying rsciio/delmic/_api.py -> build/lib/rsciio/delmic copying rsciio/delmic/__init__.py -> build/lib/rsciio/delmic creating build/lib/rsciio/tests copying rsciio/tests/test_protochips.py -> build/lib/rsciio/tests copying rsciio/tests/test_jobinyvon.py -> build/lib/rsciio/tests copying rsciio/tests/test_msa.py -> build/lib/rsciio/tests copying rsciio/tests/test_nexus.py -> build/lib/rsciio/tests copying rsciio/tests/test_pantarhei.py -> build/lib/rsciio/tests copying rsciio/tests/test_trivista.py -> build/lib/rsciio/tests copying rsciio/tests/test_tvips.py -> build/lib/rsciio/tests copying rsciio/tests/test_emd_ncem.py -> build/lib/rsciio/tests copying rsciio/tests/test_mrcz.py -> build/lib/rsciio/tests copying rsciio/tests/test_mrc.py -> build/lib/rsciio/tests copying rsciio/tests/test_phenom.py -> build/lib/rsciio/tests copying rsciio/tests/test_quantumdetector.py -> build/lib/rsciio/tests copying rsciio/tests/test_renishaw.py -> build/lib/rsciio/tests copying rsciio/tests/test_tia.py -> build/lib/rsciio/tests copying rsciio/tests/registry_utils.py -> build/lib/rsciio/tests copying rsciio/tests/test_fei_stream_readers.py -> build/lib/rsciio/tests copying rsciio/tests/test_edax.py -> build/lib/rsciio/tests copying rsciio/tests/registry.py -> build/lib/rsciio/tests copying rsciio/tests/generate_dm_testing_files.py -> build/lib/rsciio/tests copying rsciio/tests/test_hspy.py -> build/lib/rsciio/tests copying rsciio/tests/test_io.py -> build/lib/rsciio/tests copying rsciio/tests/test_image.py -> build/lib/rsciio/tests copying rsciio/tests/conftest.py -> build/lib/rsciio/tests copying rsciio/tests/test_delmic.py -> build/lib/rsciio/tests copying rsciio/tests/test_emd_prismatic.py -> build/lib/rsciio/tests copying rsciio/tests/test_empad.py -> build/lib/rsciio/tests copying rsciio/tests/test_hamamatsu.py -> build/lib/rsciio/tests copying rsciio/tests/test_tiff.py -> build/lib/rsciio/tests copying rsciio/tests/__init__.py -> build/lib/rsciio/tests copying rsciio/tests/test_jeol.py -> build/lib/rsciio/tests copying rsciio/tests/test_blockfile.py -> build/lib/rsciio/tests copying rsciio/tests/test_set_log_level.py -> build/lib/rsciio/tests copying rsciio/tests/test_semper.py -> build/lib/rsciio/tests copying rsciio/tests/test_impulse.py -> build/lib/rsciio/tests copying rsciio/tests/test_bruker.py -> build/lib/rsciio/tests copying rsciio/tests/test_digitalsurf.py -> build/lib/rsciio/tests copying rsciio/tests/test_ripple.py -> build/lib/rsciio/tests copying rsciio/tests/test_zspy.py -> build/lib/rsciio/tests copying rsciio/tests/test_import.py -> build/lib/rsciio/tests copying rsciio/tests/test_dens.py -> build/lib/rsciio/tests copying rsciio/tests/generate_renishaw_test_file.py -> build/lib/rsciio/tests copying rsciio/tests/test_emd_velox.py -> build/lib/rsciio/tests copying rsciio/tests/test_digitalmicrograph.py -> build/lib/rsciio/tests copying rsciio/tests/test_lazy_not_implemented.py -> build/lib/rsciio/tests copying rsciio/tests/test_de5.py -> build/lib/rsciio/tests copying rsciio/tests/test_usid.py -> build/lib/rsciio/tests creating build/lib/rsciio/digitalmicrograph copying rsciio/digitalmicrograph/_api.py -> build/lib/rsciio/digitalmicrograph copying rsciio/digitalmicrograph/__init__.py -> build/lib/rsciio/digitalmicrograph creating build/lib/rsciio/empad copying rsciio/empad/_api.py -> build/lib/rsciio/empad copying rsciio/empad/__init__.py -> build/lib/rsciio/empad creating build/lib/rsciio/tests/utils copying rsciio/tests/utils/test_utils.py -> build/lib/rsciio/tests/utils copying rsciio/tests/utils/test_rgbtools.py -> build/lib/rsciio/tests/utils copying rsciio/tests/utils/__init__.py -> build/lib/rsciio/tests/utils running egg_info creating rosettasciio.egg-info writing rosettasciio.egg-info/PKG-INFO writing dependency_links to rosettasciio.egg-info/dependency_links.txt writing requirements to rosettasciio.egg-info/requires.txt writing top-level names to rosettasciio.egg-info/top_level.txt writing manifest file 'rosettasciio.egg-info/SOURCES.txt' reading manifest file 'rosettasciio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'rsciio/tests/data' adding license file 'COPYING.txt' writing manifest file 'rosettasciio.egg-info/SOURCES.txt' installing to build/bdist.linux-i686/wheel running install running install_lib creating build/bdist.linux-i686/wheel creating build/bdist.linux-i686/wheel/rsciio creating build/bdist.linux-i686/wheel/rsciio/protochips copying build/lib/rsciio/protochips/_api.py -> build/bdist.linux-i686/wheel/./rsciio/protochips copying build/lib/rsciio/protochips/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/protochips creating build/bdist.linux-i686/wheel/rsciio/phenom copying build/lib/rsciio/phenom/_api.py -> build/bdist.linux-i686/wheel/./rsciio/phenom copying build/lib/rsciio/phenom/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/phenom creating build/bdist.linux-i686/wheel/rsciio/tia copying build/lib/rsciio/tia/_api.py -> build/bdist.linux-i686/wheel/./rsciio/tia copying build/lib/rsciio/tia/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/tia creating build/bdist.linux-i686/wheel/rsciio/msa copying build/lib/rsciio/msa/_api.py -> build/bdist.linux-i686/wheel/./rsciio/msa copying build/lib/rsciio/msa/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/msa creating build/bdist.linux-i686/wheel/rsciio/zspy copying build/lib/rsciio/zspy/_api.py -> build/bdist.linux-i686/wheel/./rsciio/zspy copying build/lib/rsciio/zspy/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/zspy creating build/bdist.linux-i686/wheel/rsciio/digitalsurf copying build/lib/rsciio/digitalsurf/_api.py -> build/bdist.linux-i686/wheel/./rsciio/digitalsurf copying build/lib/rsciio/digitalsurf/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/digitalsurf creating build/bdist.linux-i686/wheel/rsciio/jeol copying build/lib/rsciio/jeol/_api.py -> build/bdist.linux-i686/wheel/./rsciio/jeol copying build/lib/rsciio/jeol/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/jeol creating build/bdist.linux-i686/wheel/rsciio/mrcz copying build/lib/rsciio/mrcz/_api.py -> build/bdist.linux-i686/wheel/./rsciio/mrcz copying build/lib/rsciio/mrcz/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/mrcz creating build/bdist.linux-i686/wheel/rsciio/impulse copying build/lib/rsciio/impulse/_api.py -> build/bdist.linux-i686/wheel/./rsciio/impulse copying build/lib/rsciio/impulse/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/impulse creating build/bdist.linux-i686/wheel/rsciio/edax copying build/lib/rsciio/edax/_api.py -> build/bdist.linux-i686/wheel/./rsciio/edax copying build/lib/rsciio/edax/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/edax copying build/lib/rsciio/_docstrings.py -> build/bdist.linux-i686/wheel/./rsciio creating build/bdist.linux-i686/wheel/rsciio/usid copying build/lib/rsciio/usid/_api.py -> build/bdist.linux-i686/wheel/./rsciio/usid copying build/lib/rsciio/usid/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/usid creating build/bdist.linux-i686/wheel/rsciio/hspy copying build/lib/rsciio/hspy/_api.py -> build/bdist.linux-i686/wheel/./rsciio/hspy copying build/lib/rsciio/hspy/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/hspy creating build/bdist.linux-i686/wheel/rsciio/jobinyvon copying build/lib/rsciio/jobinyvon/_api.py -> build/bdist.linux-i686/wheel/./rsciio/jobinyvon copying build/lib/rsciio/jobinyvon/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/jobinyvon creating build/bdist.linux-i686/wheel/rsciio/image copying build/lib/rsciio/image/_api.py -> build/bdist.linux-i686/wheel/./rsciio/image copying build/lib/rsciio/image/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/image creating build/bdist.linux-i686/wheel/rsciio/semper copying build/lib/rsciio/semper/_api.py -> build/bdist.linux-i686/wheel/./rsciio/semper copying build/lib/rsciio/semper/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/semper creating build/bdist.linux-i686/wheel/rsciio/mrc copying build/lib/rsciio/mrc/_api.py -> build/bdist.linux-i686/wheel/./rsciio/mrc copying build/lib/rsciio/mrc/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/mrc copying build/lib/rsciio/_hierarchical.py -> build/bdist.linux-i686/wheel/./rsciio creating build/bdist.linux-i686/wheel/rsciio/renishaw copying build/lib/rsciio/renishaw/_api.py -> build/bdist.linux-i686/wheel/./rsciio/renishaw copying build/lib/rsciio/renishaw/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/renishaw creating build/bdist.linux-i686/wheel/rsciio/pantarhei copying build/lib/rsciio/pantarhei/_api.py -> build/bdist.linux-i686/wheel/./rsciio/pantarhei copying build/lib/rsciio/pantarhei/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/pantarhei creating build/bdist.linux-i686/wheel/rsciio/nexus copying build/lib/rsciio/nexus/_api.py -> build/bdist.linux-i686/wheel/./rsciio/nexus copying build/lib/rsciio/nexus/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/nexus creating build/bdist.linux-i686/wheel/rsciio/emd copying build/lib/rsciio/emd/_api.py -> build/bdist.linux-i686/wheel/./rsciio/emd copying build/lib/rsciio/emd/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/emd copying build/lib/rsciio/emd/_emd_velox.py -> build/bdist.linux-i686/wheel/./rsciio/emd copying build/lib/rsciio/emd/_emd_ncem.py -> build/bdist.linux-i686/wheel/./rsciio/emd copying build/lib/rsciio/_logger.py -> build/bdist.linux-i686/wheel/./rsciio creating build/bdist.linux-i686/wheel/rsciio/tiff copying build/lib/rsciio/tiff/_api.py -> build/bdist.linux-i686/wheel/./rsciio/tiff copying build/lib/rsciio/tiff/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/tiff copying build/lib/rsciio/__init__.py -> build/bdist.linux-i686/wheel/./rsciio creating build/bdist.linux-i686/wheel/rsciio/ripple copying build/lib/rsciio/ripple/_api.py -> build/bdist.linux-i686/wheel/./rsciio/ripple copying build/lib/rsciio/ripple/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/ripple creating build/bdist.linux-i686/wheel/rsciio/tvips copying build/lib/rsciio/tvips/_api.py -> build/bdist.linux-i686/wheel/./rsciio/tvips copying build/lib/rsciio/tvips/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/tvips creating build/bdist.linux-i686/wheel/rsciio/utils copying build/lib/rsciio/utils/rgb_tools.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/skimage_exposure.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/elements.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/tools.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/exceptions.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/tests.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/fei_stream_readers.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/distributed.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/image.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/date_time_tools.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/array.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/readfile.py -> build/bdist.linux-i686/wheel/./rsciio/utils copying build/lib/rsciio/utils/hdf5.py -> build/bdist.linux-i686/wheel/./rsciio/utils creating build/bdist.linux-i686/wheel/rsciio/netcdf copying build/lib/rsciio/netcdf/_api.py -> build/bdist.linux-i686/wheel/./rsciio/netcdf copying build/lib/rsciio/netcdf/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/netcdf creating build/bdist.linux-i686/wheel/rsciio/trivista copying build/lib/rsciio/trivista/_api.py -> build/bdist.linux-i686/wheel/./rsciio/trivista copying build/lib/rsciio/trivista/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/trivista creating build/bdist.linux-i686/wheel/rsciio/hamamatsu copying build/lib/rsciio/hamamatsu/_api.py -> build/bdist.linux-i686/wheel/./rsciio/hamamatsu copying build/lib/rsciio/hamamatsu/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/hamamatsu creating build/bdist.linux-i686/wheel/rsciio/blockfile copying build/lib/rsciio/blockfile/_api.py -> build/bdist.linux-i686/wheel/./rsciio/blockfile copying build/lib/rsciio/blockfile/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/blockfile creating build/bdist.linux-i686/wheel/rsciio/bruker copying build/lib/rsciio/bruker/_api.py -> build/bdist.linux-i686/wheel/./rsciio/bruker copying build/lib/rsciio/bruker/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/bruker creating build/bdist.linux-i686/wheel/rsciio/quantumdetector copying build/lib/rsciio/quantumdetector/_api.py -> build/bdist.linux-i686/wheel/./rsciio/quantumdetector copying build/lib/rsciio/quantumdetector/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/quantumdetector creating build/bdist.linux-i686/wheel/rsciio/dens copying build/lib/rsciio/dens/_api.py -> build/bdist.linux-i686/wheel/./rsciio/dens copying build/lib/rsciio/dens/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/dens creating build/bdist.linux-i686/wheel/rsciio/delmic copying build/lib/rsciio/delmic/_api.py -> build/bdist.linux-i686/wheel/./rsciio/delmic copying build/lib/rsciio/delmic/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/delmic creating build/bdist.linux-i686/wheel/rsciio/tests copying build/lib/rsciio/tests/test_protochips.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_jobinyvon.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_msa.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_nexus.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_pantarhei.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_trivista.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_tvips.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_emd_ncem.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_mrcz.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_mrc.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_phenom.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_quantumdetector.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_renishaw.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_tia.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/registry_utils.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_fei_stream_readers.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_edax.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/registry.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/generate_dm_testing_files.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_hspy.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_io.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_image.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/conftest.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_delmic.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_emd_prismatic.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_empad.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_hamamatsu.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_tiff.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_jeol.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_blockfile.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_set_log_level.py -> build/bdist.linux-i686/wheel/./rsciio/tests creating build/bdist.linux-i686/wheel/rsciio/tests/utils copying build/lib/rsciio/tests/utils/test_utils.py -> build/bdist.linux-i686/wheel/./rsciio/tests/utils copying build/lib/rsciio/tests/utils/test_rgbtools.py -> build/bdist.linux-i686/wheel/./rsciio/tests/utils copying build/lib/rsciio/tests/utils/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/tests/utils copying build/lib/rsciio/tests/test_semper.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_impulse.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_bruker.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_digitalsurf.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_ripple.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_zspy.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_import.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_dens.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/generate_renishaw_test_file.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_emd_velox.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_digitalmicrograph.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_lazy_not_implemented.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_de5.py -> build/bdist.linux-i686/wheel/./rsciio/tests copying build/lib/rsciio/tests/test_usid.py -> build/bdist.linux-i686/wheel/./rsciio/tests creating build/bdist.linux-i686/wheel/rsciio/digitalmicrograph copying build/lib/rsciio/digitalmicrograph/_api.py -> build/bdist.linux-i686/wheel/./rsciio/digitalmicrograph copying build/lib/rsciio/digitalmicrograph/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/digitalmicrograph creating build/bdist.linux-i686/wheel/rsciio/empad copying build/lib/rsciio/empad/_api.py -> build/bdist.linux-i686/wheel/./rsciio/empad copying build/lib/rsciio/empad/__init__.py -> build/bdist.linux-i686/wheel/./rsciio/empad running install_egg_info Copying rosettasciio.egg-info to build/bdist.linux-i686/wheel/./rosettasciio-0.0.0.egg-info running install_scripts creating build/bdist.linux-i686/wheel/rosettasciio-0.0.0.dist-info/WHEEL creating '/build/reproducible-path/python-rosettasciio-0.7.1/.pybuild/cpython3_3.13_rosettasciio/.tmp-5ze50mu2/rosettasciio-0.0.0-py3-none-any.whl' and adding 'build/bdist.linux-i686/wheel' to it adding 'rsciio/__init__.py' adding 'rsciio/_docstrings.py' adding 'rsciio/_hierarchical.py' adding 'rsciio/_logger.py' adding 'rsciio/blockfile/__init__.py' adding 'rsciio/blockfile/_api.py' adding 'rsciio/bruker/__init__.py' adding 'rsciio/bruker/_api.py' adding 'rsciio/delmic/__init__.py' adding 'rsciio/delmic/_api.py' adding 'rsciio/dens/__init__.py' adding 'rsciio/dens/_api.py' adding 'rsciio/digitalmicrograph/__init__.py' adding 'rsciio/digitalmicrograph/_api.py' adding 'rsciio/digitalsurf/__init__.py' adding 'rsciio/digitalsurf/_api.py' adding 'rsciio/edax/__init__.py' adding 'rsciio/edax/_api.py' adding 'rsciio/emd/__init__.py' adding 'rsciio/emd/_api.py' adding 'rsciio/emd/_emd_ncem.py' adding 'rsciio/emd/_emd_velox.py' adding 'rsciio/empad/__init__.py' adding 'rsciio/empad/_api.py' adding 'rsciio/hamamatsu/__init__.py' adding 'rsciio/hamamatsu/_api.py' adding 'rsciio/hspy/__init__.py' adding 'rsciio/hspy/_api.py' adding 'rsciio/image/__init__.py' adding 'rsciio/image/_api.py' adding 'rsciio/impulse/__init__.py' adding 'rsciio/impulse/_api.py' adding 'rsciio/jeol/__init__.py' adding 'rsciio/jeol/_api.py' adding 'rsciio/jobinyvon/__init__.py' adding 'rsciio/jobinyvon/_api.py' adding 'rsciio/mrc/__init__.py' adding 'rsciio/mrc/_api.py' adding 'rsciio/mrcz/__init__.py' adding 'rsciio/mrcz/_api.py' adding 'rsciio/msa/__init__.py' adding 'rsciio/msa/_api.py' adding 'rsciio/netcdf/__init__.py' adding 'rsciio/netcdf/_api.py' adding 'rsciio/nexus/__init__.py' adding 'rsciio/nexus/_api.py' adding 'rsciio/pantarhei/__init__.py' adding 'rsciio/pantarhei/_api.py' adding 'rsciio/phenom/__init__.py' adding 'rsciio/phenom/_api.py' adding 'rsciio/protochips/__init__.py' adding 'rsciio/protochips/_api.py' adding 'rsciio/quantumdetector/__init__.py' adding 'rsciio/quantumdetector/_api.py' adding 'rsciio/renishaw/__init__.py' adding 'rsciio/renishaw/_api.py' adding 'rsciio/ripple/__init__.py' adding 'rsciio/ripple/_api.py' adding 'rsciio/semper/__init__.py' adding 'rsciio/semper/_api.py' adding 'rsciio/tests/__init__.py' adding 'rsciio/tests/conftest.py' adding 'rsciio/tests/generate_dm_testing_files.py' adding 'rsciio/tests/generate_renishaw_test_file.py' adding 'rsciio/tests/registry.py' adding 'rsciio/tests/registry_utils.py' adding 'rsciio/tests/test_blockfile.py' adding 'rsciio/tests/test_bruker.py' adding 'rsciio/tests/test_de5.py' adding 'rsciio/tests/test_delmic.py' adding 'rsciio/tests/test_dens.py' adding 'rsciio/tests/test_digitalmicrograph.py' adding 'rsciio/tests/test_digitalsurf.py' adding 'rsciio/tests/test_edax.py' adding 'rsciio/tests/test_emd_ncem.py' adding 'rsciio/tests/test_emd_prismatic.py' adding 'rsciio/tests/test_emd_velox.py' adding 'rsciio/tests/test_empad.py' adding 'rsciio/tests/test_fei_stream_readers.py' adding 'rsciio/tests/test_hamamatsu.py' adding 'rsciio/tests/test_hspy.py' adding 'rsciio/tests/test_image.py' adding 'rsciio/tests/test_import.py' adding 'rsciio/tests/test_impulse.py' adding 'rsciio/tests/test_io.py' adding 'rsciio/tests/test_jeol.py' adding 'rsciio/tests/test_jobinyvon.py' adding 'rsciio/tests/test_lazy_not_implemented.py' adding 'rsciio/tests/test_mrc.py' adding 'rsciio/tests/test_mrcz.py' adding 'rsciio/tests/test_msa.py' adding 'rsciio/tests/test_nexus.py' adding 'rsciio/tests/test_pantarhei.py' adding 'rsciio/tests/test_phenom.py' adding 'rsciio/tests/test_protochips.py' adding 'rsciio/tests/test_quantumdetector.py' adding 'rsciio/tests/test_renishaw.py' adding 'rsciio/tests/test_ripple.py' adding 'rsciio/tests/test_semper.py' adding 'rsciio/tests/test_set_log_level.py' adding 'rsciio/tests/test_tia.py' adding 'rsciio/tests/test_tiff.py' adding 'rsciio/tests/test_trivista.py' adding 'rsciio/tests/test_tvips.py' adding 'rsciio/tests/test_usid.py' adding 'rsciio/tests/test_zspy.py' adding 'rsciio/tests/utils/__init__.py' adding 'rsciio/tests/utils/test_rgbtools.py' adding 'rsciio/tests/utils/test_utils.py' adding 'rsciio/tia/__init__.py' adding 'rsciio/tia/_api.py' adding 'rsciio/tiff/__init__.py' adding 'rsciio/tiff/_api.py' adding 'rsciio/trivista/__init__.py' adding 'rsciio/trivista/_api.py' adding 'rsciio/tvips/__init__.py' adding 'rsciio/tvips/_api.py' adding 'rsciio/usid/__init__.py' adding 'rsciio/usid/_api.py' adding 'rsciio/utils/__init__.py' adding 'rsciio/utils/array.py' adding 'rsciio/utils/date_time_tools.py' adding 'rsciio/utils/distributed.py' adding 'rsciio/utils/elements.py' adding 'rsciio/utils/exceptions.py' adding 'rsciio/utils/fei_stream_readers.py' adding 'rsciio/utils/hdf5.py' adding 'rsciio/utils/image.py' adding 'rsciio/utils/readfile.py' adding 'rsciio/utils/rgb_tools.py' adding 'rsciio/utils/skimage_exposure.py' adding 'rsciio/utils/tests.py' adding 'rsciio/utils/tools.py' adding 'rsciio/zspy/__init__.py' adding 'rsciio/zspy/_api.py' adding 'rosettasciio-0.0.0.dist-info/COPYING.txt' adding 'rosettasciio-0.0.0.dist-info/METADATA' adding 'rosettasciio-0.0.0.dist-info/WHEEL' adding 'rosettasciio-0.0.0.dist-info/top_level.txt' adding 'rosettasciio-0.0.0.dist-info/RECORD' removing build/bdist.linux-i686/wheel Successfully built rosettasciio-0.0.0-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module debian/rules execute_after_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/python-rosettasciio-0.7.1' cd doc && \ PYTHONPATH=/build/reproducible-path/python-rosettasciio-0.7.1 http_proxy='http://127.0.0.1:9/' https_proxy='https://127.0.0.1:9/' \ sphinx-build -N -E -T -b html . /build/reproducible-path/python-rosettasciio-0.7.1/.pybuild/docs/html/ Running Sphinx v8.1.3 loading translations [en]... done making output directory... done [autosummary] generating autosummary for: api/index.rst, api/utils.rst, changes.rst, contributing.rst, file_specification/index.rst, file_specification/ripple-specs.rst, index.rst, supported_formats/blockfile.rst, supported_formats/bruker.rst, supported_formats/de5.rst, ..., supported_formats/supported_formats.rst, supported_formats/tia.rst, supported_formats/tiff.rst, supported_formats/trivista.rst, supported_formats/tvips.rst, supported_formats/usid.rst, supported_formats/zspy.rst, user_guide/index.rst, user_guide/install.rst, user_guide/interoperability.rst Matplotlib created a temporary cache directory at /tmp/matplotlib-gy42iul5 because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. WARNING | RosettaSciIO | Falling back to slow pure python code, because `numba` is not installed. (rsciio.utils.tools:569) WARNING | RosettaSciIO | Falling back to slow pure python code, because `numba` is not installed. (rsciio.utils.tools:569) WARNING | RosettaSciIO | Falling back to slow pure python code, because `numba` is not installed. (rsciio.utils.tools:569) WARNING | RosettaSciIO | Falling back to slow pure python code, because `numba` is not installed. (rsciio.utils.tools:569) loading intersphinx inventory 'conda' from https://conda.io/projects/conda/en/latest/objects.inv ... loading intersphinx inventory 'dask' from https://docs.dask.org/en/latest/objects.inv ... loading intersphinx inventory 'exspy' from https://hyperspy.org/exspy/objects.inv ... loading intersphinx inventory 'hyperspy' from https://hyperspy.org/hyperspy-doc/current/objects.inv ... loading intersphinx inventory 'h5py' from https://docs.h5py.org/en/stable/objects.inv ... 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WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://numcodecs.readthedocs.io/en/stable/objects.inv' not fetchable due to : HTTPSConnectionPool(host='numcodecs.readthedocs.io', port=443): Max retries exceeded with url: /en/stable/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) loading intersphinx inventory 'mrcz' from https://python-mrcz.readthedocs.io/objects.inv ... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://matplotlib.org/stable/objects.inv' not fetchable due to : HTTPSConnectionPool(host='matplotlib.org', port=443): Max retries exceeded with url: /stable/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://conda.io/projects/conda/en/latest/objects.inv' not fetchable due to : HTTPSConnectionPool(host='conda.io', port=443): Max retries exceeded with url: /projects/conda/en/latest/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://www.fatiando.org/pooch/latest/objects.inv' not fetchable due to : HTTPSConnectionPool(host='www.fatiando.org', port=443): Max retries exceeded with url: /pooch/latest/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://numpy.org/doc/stable/objects.inv' not fetchable due to : HTTPSConnectionPool(host='numpy.org', port=443): Max retries exceeded with url: /doc/stable/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://python-mrcz.readthedocs.io/objects.inv' not fetchable due to : HTTPSConnectionPool(host='python-mrcz.readthedocs.io', port=443): Max retries exceeded with url: /objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) loading intersphinx inventory 'pyusid' from https://pycroscopy.github.io/pyUSID/objects.inv ... loading intersphinx inventory 'python' from https://docs.python.org/3/objects.inv ... loading intersphinx inventory 'zarr' from https://zarr.readthedocs.io/en/v2.18.4/objects.inv ... 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[ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tests/registry_utils.py:docstring of rsciio.tests.registry_utils.download_all:8: WARNING: py:obj reference target not found: pooch.Pooch [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tests/registry_utils.py:docstring of rsciio.tests.registry_utils.download_all:8: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tests/registry_utils.py:docstring of rsciio.tests.registry_utils.download_all:12: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tests/registry_utils.py:docstring of rsciio.tests.registry_utils.download_all:12: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tests/registry_utils.py:docstring of rsciio.tests.registry_utils.download_all:18: WARNING: undefined 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[ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/blockfile/__init__.py:docstring of rsciio.blockfile._api.file_reader:35: WARNING: py:class reference target not found: numpy.ndarray [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/blockfile/__init__.py:docstring of rsciio.blockfile._api.file_reader:35: WARNING: py:class reference target not found: dask.array.Array [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/blockfile/__init__.py:docstring of rsciio.blockfile._api.file_writer:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/blockfile/__init__.py:docstring of rsciio.blockfile._api.file_writer:7: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/blockfile/__init__.py:docstring of rsciio.blockfile._api.file_writer:10: WARNING: py:class reference target not found: 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/build/reproducible-path/python-rosettasciio-0.7.1/rsciio/bruker/__init__.py:docstring of rsciio.bruker._api.file_reader:34: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/bruker/__init__.py:docstring of rsciio.bruker._api.file_reader:46: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/bruker/__init__.py:docstring of rsciio.bruker._api.file_reader:46: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/bruker/__init__.py:docstring of rsciio.bruker._api.file_reader:53: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/bruker/__init__.py:docstring of rsciio.bruker._api.file_reader:53: WARNING: py:class reference target not found: python:dict [ref.class] 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rsciio.edax._api.file_reader:11: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/edax/__init__.py:docstring of rsciio.edax._api.file_reader:12: WARNING: py:meth reference target not found: hyperspy._signals.lazy.LazySignal.compute [ref.meth] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/edax/__init__.py:docstring of rsciio.edax._api.file_reader:17: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/edax/__init__.py:docstring of rsciio.edax._api.file_reader:21: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/edax/__init__.py:docstring of rsciio.edax._api.file_reader:21: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/edax/__init__.py:docstring of 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/build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:18: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:22: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:22: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:26: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:32: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:36: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:36: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:40: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:45: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:51: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:56: WARNING: py:obj reference target not found: numpy.dtype [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:56: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:62: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:72: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:72: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:75: WARNING: py:class reference target not found: numpy.ndarray [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_reader:75: WARNING: py:class reference target not found: dask.array.Array [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_writer:8: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_writer:8: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/emd/__init__.py:docstring of rsciio.emd._api.file_writer:11: WARNING: py:class reference target not found: python:dict [ref.class] 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/build/reproducible-path/python-rosettasciio-0.7.1/rsciio/image/__init__.py:docstring of rsciio.image._api.file_reader:13: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/image/__init__.py:docstring of rsciio.image._api.file_reader:14: WARNING: py:meth reference target not found: hyperspy._signals.lazy.LazySignal.compute [ref.meth] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/image/__init__.py:docstring of rsciio.image._api.file_reader:19: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/image/__init__.py:docstring of rsciio.image._api.file_reader:28: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/image/__init__.py:docstring of rsciio.image._api.file_reader:28: WARNING: py:class reference target not found: python:dict [ref.class] 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/build/reproducible-path/python-rosettasciio-0.7.1/rsciio/jeol/__init__.py:docstring of rsciio.jeol._api.file_reader:35: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/jeol/__init__.py:docstring of rsciio.jeol._api.file_reader:40: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/jeol/__init__.py:docstring of rsciio.jeol._api.file_reader:47: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/jeol/__init__.py:docstring of rsciio.jeol._api.file_reader:52: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/jeol/__init__.py:docstring of rsciio.jeol._api.file_reader:52: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/jeol/__init__.py:docstring of rsciio.jeol._api.file_reader:52: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/jeol/__init__.py:docstring of rsciio.jeol._api.file_reader:57: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/jeol/__init__.py:docstring of rsciio.jeol._api.file_reader:57: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/jeol/__init__.py:docstring of rsciio.jeol._api.file_reader:57: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/jeol/__init__.py:docstring of rsciio.jeol._api.file_reader:57: WARNING: py:class reference target not found: python:list [ref.class] 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/build/reproducible-path/python-rosettasciio-0.7.1/rsciio/msa/__init__.py:docstring of rsciio.msa._api.parse_msa_string:10: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/msa/__init__.py:docstring of rsciio.msa._api.parse_msa_string:17: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/netcdf/__init__.py:docstring of rsciio.netcdf._api.file_reader:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/netcdf/__init__.py:docstring of rsciio.netcdf._api.file_reader:7: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/netcdf/__init__.py:docstring of rsciio.netcdf._api.file_reader:10: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/netcdf/__init__.py:docstring of rsciio.netcdf._api.file_reader:17: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/netcdf/__init__.py:docstring of rsciio.netcdf._api.file_reader:17: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/netcdf/__init__.py:docstring of rsciio.netcdf._api.file_reader:20: WARNING: py:class reference target not found: numpy.ndarray [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/netcdf/__init__.py:docstring of rsciio.netcdf._api.file_reader:20: WARNING: py:class reference target not found: dask.array.Array [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:7: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:10: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:11: WARNING: py:meth reference target not found: hyperspy._signals.lazy.LazySignal.compute [ref.meth] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:16: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:16: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:16: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:16: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:23: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:23: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:23: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:23: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:32: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:32: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:32: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:32: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:37: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:41: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:45: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:48: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:54: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:54: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:62: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:62: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:65: WARNING: py:class reference target not found: numpy.ndarray [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_reader:65: WARNING: py:class reference target not found: dask.array.Array [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:10: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:10: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:13: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:24: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:24: WARNING: py:data reference target not found: python:True [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:29: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:29: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:29: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:29: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:33: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:33: WARNING: py:data reference target not found: python:False [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/nexus/__init__.py:docstring of rsciio.nexus._api.file_writer:38: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/pantarhei/__init__.py:docstring of rsciio.pantarhei._api.file_reader:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/pantarhei/__init__.py:docstring of rsciio.pantarhei._api.file_reader:7: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/pantarhei/__init__.py:docstring of rsciio.pantarhei._api.file_reader:10: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] 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/build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.load_mib_data:19: WARNING: py:func reference target not found: dask.array.from_array [ref.func] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.load_mib_data:22: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.load_mib_data:23: WARNING: py:class reference target not found: numpy.memmap [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.load_mib_data:30: WARNING: py:class reference target not found: python:tuple [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of 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/build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.load_mib_data:53: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.load_mib_data:56: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.load_mib_data:57: WARNING: py:class reference target not found: numpy.memmap [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.load_mib_data:63: WARNING: py:obj reference target not found: numpy.ndarray [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.load_mib_data:63: 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/build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.parse_exposures:10: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.parse_exposures:19: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.parse_timestamps:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.parse_timestamps:7: WARNING: term not in glossary: 'python:iterable' [ref.term] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.parse_timestamps:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.parse_timestamps:10: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/quantumdetector/__init__.py:docstring of rsciio.quantumdetector._api.parse_timestamps:19: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/renishaw/__init__.py:docstring of rsciio.renishaw._api.file_reader:8: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/renishaw/__init__.py:docstring of rsciio.renishaw._api.file_reader:8: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/renishaw/__init__.py:docstring of rsciio.renishaw._api.file_reader:11: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/renishaw/__init__.py:docstring of rsciio.renishaw._api.file_reader:12: WARNING: py:meth reference target not found: hyperspy._signals.lazy.LazySignal.compute [ref.meth] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/renishaw/__init__.py:docstring of rsciio.renishaw._api.file_reader:17: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/renishaw/__init__.py:docstring of rsciio.renishaw._api.file_reader:23: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/renishaw/__init__.py:docstring of rsciio.renishaw._api.file_reader:35: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/renishaw/__init__.py:docstring of rsciio.renishaw._api.file_reader:35: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/renishaw/__init__.py:docstring of rsciio.renishaw._api.file_reader:38: WARNING: py:class reference target not found: numpy.ndarray [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/renishaw/__init__.py:docstring of rsciio.renishaw._api.file_reader:38: WARNING: py:class reference target not found: dask.array.Array [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:10: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:10: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:13: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:14: WARNING: py:meth reference target not found: hyperspy._signals.lazy.LazySignal.compute [ref.meth] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:19: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:24: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:28: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:29: WARNING: py:class reference target not found: numpy.memmap [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:40: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:40: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:43: WARNING: py:class reference target not found: numpy.ndarray [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/ripple/__init__.py:docstring of rsciio.ripple._api.file_reader:43: WARNING: py:class reference target not found: dask.array.Array [ref.class] 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/build/reproducible-path/python-rosettasciio-0.7.1/rsciio/semper/__init__.py:docstring of rsciio.semper._api.file_writer:21: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tia/__init__.py:docstring of rsciio.tia._api.file_reader:8: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tia/__init__.py:docstring of rsciio.tia._api.file_reader:8: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tia/__init__.py:docstring of rsciio.tia._api.file_reader:11: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tia/__init__.py:docstring of rsciio.tia._api.file_reader:12: WARNING: py:meth reference target not found: hyperspy._signals.lazy.LazySignal.compute [ref.meth] 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/build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_reader:25: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_reader:33: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_reader:48: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_reader:56: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_reader:56: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_reader:59: WARNING: py:class reference target not found: numpy.ndarray [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_reader:59: WARNING: py:class reference target not found: dask.array.Array [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_writer:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_writer:7: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_writer:10: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_writer:21: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_writer:25: WARNING: py:class reference target not found: python:tuple [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_writer:25: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_writer:25: WARNING: py:class reference target not found: python:tuple [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_writer:25: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tiff/__init__.py:docstring of rsciio.tiff._api.file_writer:30: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:7: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:10: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:11: WARNING: py:meth reference target not found: hyperspy._signals.lazy.LazySignal.compute [ref.meth] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:16: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:22: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:32: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:46: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:46: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:49: WARNING: py:class reference target not found: numpy.ndarray [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/trivista/__init__.py:docstring of rsciio.trivista._api.file_reader:49: WARNING: py:class reference target not found: dask.array.Array [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:7: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:10: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:11: WARNING: py:meth reference target not found: hyperspy._signals.lazy.LazySignal.compute [ref.meth] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:16: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:16: WARNING: py:class reference target not found: python:tuple [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:16: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:16: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:28: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:32: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:40: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:46: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:46: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:46: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:58: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:58: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:61: WARNING: py:class reference target not found: numpy.ndarray [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_reader:61: WARNING: py:class reference target not found: dask.array.Array [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_writer:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_writer:7: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_writer:10: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_writer:21: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_writer:21: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_writer:29: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_writer:32: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_writer:35: WARNING: py:class reference target not found: python:int [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_writer:35: WARNING: py:data reference target not found: python:None [ref.data] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tvips/__init__.py:docstring of rsciio.tvips._api.file_writer:39: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_reader:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_reader:7: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_reader:10: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_reader:11: WARNING: py:meth reference target not found: hyperspy._signals.lazy.LazySignal.compute [ref.meth] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_reader:16: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_reader:24: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_reader:34: WARNING: py:class reference target not found: python:list [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_reader:34: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_reader:37: WARNING: py:class reference target not found: numpy.ndarray [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_reader:37: WARNING: py:class reference target not found: dask.array.Array [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_writer:7: WARNING: py:class reference target not found: python:str [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_writer:7: WARNING: py:obj reference target not found: pathlib.Path [ref.obj] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_writer:10: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_writer:21: WARNING: py:class reference target not found: python:dict [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/usid/__init__.py:docstring of rsciio.usid._api.file_writer:22: WARNING: py:func reference target not found: pyUSID.io.hdf_utils.model.write_main_dataset [ref.func] 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'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/zspy/__init__.py:docstring of rsciio.zspy._api.file_writer:32: WARNING: py:class reference target not found: zarr.storage.ZipStore [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/zspy/__init__.py:docstring of rsciio.zspy._api.file_writer:32: WARNING: py:class reference target not found: zarr.storage.DBMStore [ref.class] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/zspy/__init__.py:docstring of rsciio.zspy._api.file_writer:38: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/zspy/__init__.py:docstring of rsciio.zspy._api.file_writer:43: WARNING: undefined label: 'python:bltin-boolean-values' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/zspy/__init__.py:docstring of rsciio.zspy._api.file_writer:47: WARNING: py:meth reference target not found: zarr.hierarchy.Group.require_dataset [ref.meth] /build/reproducible-path/python-rosettasciio-0.7.1/doc/user_guide/install.rst:4: WARNING: undefined label: 'hyperspy:hyperspy-bundle' [ref.ref] /build/reproducible-path/python-rosettasciio-0.7.1/doc/user_guide/install.rst:84: WARNING: unknown document: 'conda:user-guide/tasks/manage-environments' [ref.doc] /build/reproducible-path/python-rosettasciio-0.7.1/doc/user_guide/install.rst:120: WARNING: undefined label: 'hyperspy:hyperspy-bundle' [ref.ref] generating indices... genindex py-modindex done writing additional pages... search done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 661 warnings. The HTML pages are in ../.pybuild/docs/html. rm -rf /build/reproducible-path/python-rosettasciio-0.7.1/.pybuild/docs/html/.doctrees make[1]: Leaving directory '/build/reproducible-path/python-rosettasciio-0.7.1' dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-rosettasciio-0.7.1/.pybuild/cpython3_3.13_rosettasciio/build; python3.13 -m pytest /build/reproducible-path/python-rosettasciio-0.7.1/rsciio/tests -k 'not test_serial_date_to_ISO_format and not test_ISO_format_to_serial_date and not test_datetime_to_serial_date and not test_get_date_time_from_metadata' ============================= test session starts ============================== platform linux -- Python 3.13.2, pytest-8.3.4, pluggy-1.5.0 rootdir: /build/reproducible-path/python-rosettasciio-0.7.1 configfile: pyproject.toml plugins: xdist-3.6.1, typeguard-4.4.2 created: 12/12 workers 12 workers [143 items] ...s..ss.s.ss.s..s.s.s..s.s..s.s.s..ssssss.s...s.s.....ss.ssssssssssssss [ 50%] ssss.s.s.s.s.s.sss.sss................................................. [100%] =============================== warnings summary =============================== rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:66: SyntaxWarning: invalid escape sequence '\A' pixelsize=pixelsize, pixelunits=u'\AA', rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:70: SyntaxWarning: invalid escape sequence '\A' rereadMage, rereadHeader = mrcz.readMRC(mrcName, pixelunits=u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:77: SyntaxWarning: invalid escape sequence '\A' assert(rereadHeader['pixelunits'] == u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:149: SyntaxWarning: invalid escape sequence '\A' pixelsize=pixelsize, pixelunits=u'\AA', rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:153: SyntaxWarning: invalid escape sequence '\A' rereadMage, rereadHeader = mrcz.readMRC(mrcName, pixelunits=u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:166: SyntaxWarning: invalid escape sequence '\A' assert(rereadHeader['pixelunits'] == u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:178: SyntaxWarning: invalid escape sequence '\A' pixelsize=pixelsize, pixelunits=u'\AA', rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:184: SyntaxWarning: invalid escape sequence '\A' worker = mrcz.asyncReadMRC(mrcName, pixelunits=u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:198: SyntaxWarning: invalid escape sequence '\A' assert(rereadHeader['pixelunits'] == u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:211: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:232: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:251: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:271: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:293: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA', slices=slices) rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:311: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA', slices=slices) rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:447: SyntaxWarning: invalid escape sequence '\A' rereadMage, _ = mrcz.readMRC(mrcName, pixelunits=u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:487: SyntaxWarning: invalid escape sequence '\A' pixelsize=pixelsize, pixelunits=u'\AA', rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:494: SyntaxWarning: invalid escape sequence '\A' rereadMage, rereadHeader = mrcz.readMRC(mrcOutput, pixelunits=u'\AA') rsciio/tests/test_import.py::test_import_all /usr/lib/python3/dist-packages/mrcz/test_mrcz.py:505: SyntaxWarning: invalid escape sequence '\A' npt.assert_array_equal(rereadHeader['pixelunits'], u'\AA') -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ SKIPPED [1] ../../../rsciio/tests/test_blockfile.py:37: hyperspy not installed SKIPPED [1] ../../../rsciio/tests/test_bruker.py:10: hyperspy not installed SKIPPED [1] ../../../rsciio/tests/test_de5.py:27: could not import 'hyperspy.api': No module named 'hyperspy' SKIPPED [1] ../../../rsciio/tests/test_delmic.py:9: hyperspy not installed SKIPPED [1] ../../../rsciio/tests/test_dens.py:25: hyperspy not installed SKIPPED [1] ../../../rsciio/tests/test_digitalmicrograph.py:33: hyperspy not installed SKIPPED [1] ../../../rsciio/tests/test_digitalsurf.py:27: hyperspy not installed SKIPPED [1] ../../../rsciio/tests/test_edax.py:32: hyperspy not installed SKIPPED [1] ../../../rsciio/tests/test_emd_ncem.py:33: hyperspy not installed SKIPPED [1] ../../../rsciio/tests/test_emd_prismatic.py:24: hyperspy not installed SKIPPED [1] ../../../rsciio/tests/test_emd_velox.py:36: hyperspy not installed SKIPPED [1] ../../../rsciio/tests/test_empad.py:30: hyperspy not installed 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installed ================= 88 passed, 91 skipped, 19 warnings in 12.98s ================= create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-rosettasciio-doc. If the default is wrong, please use --doc-main-package dh_sphinxdoc -O--buildsystem=pybuild dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-rosettasciio-doc/usr/share/doc/python-rosettasciio-doc/html/_static/copybutton_funcs.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-rosettasciio-doc/usr/share/doc/python-rosettasciio-doc/html/_static/design-tabs.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-rosettasciio-doc/usr/share/doc/python-rosettasciio-doc/html/_static/copybutton.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-rosettasciio-doc/usr/share/doc/python-rosettasciio-doc/html/_static/clipboard.min.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-rosettasciio-doc/usr/share/doc/python-rosettasciio-doc/html/_static/scripts/fontawesome.js dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_numpy3 -O--buildsystem=pybuild Possible precedence issue with control flow operator (return) at /usr/bin/dh_numpy3 line 57. dh_numpy3: warning: skipping binary package python3-rosettasciio which does not depend on the NumPy C ABI dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package python3-rosettasciio: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package python-rosettasciio-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python-rosettasciio-doc' in '../python-rosettasciio-doc_0.7.1-2_all.deb'. dpkg-deb: building package 'python3-rosettasciio' in '../python3-rosettasciio_0.7.1-2_i386.deb'. dpkg-genbuildinfo --build=binary -O../python-rosettasciio_0.7.1-2_i386.buildinfo dpkg-genchanges --build=binary -O../python-rosettasciio_0.7.1-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from python-rosettasciio-0.7.1/debian/source/options: --extend-diff-ignore=^[^/]+.(egg-info|dist-info)/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/64718/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/64718/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/64718 and its subdirectories I: Current time: Fri Apr 10 15:42:49 +14 2026 I: pbuilder-time-stamp: 1775785369