I: pbuilder: network access will be disabled during build I: Current time: Sun Mar 9 05:14:52 -12 2025 I: pbuilder-time-stamp: 1741540492 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [twopaco_1.0.0+dfsg-1.dsc] I: copying [./twopaco_1.0.0+dfsg.orig.tar.xz] I: copying [./twopaco_1.0.0+dfsg-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./twopaco_1.0.0+dfsg-1.dsc: unsupported subcommand dpkg-source: info: extracting twopaco in twopaco-1.0.0+dfsg dpkg-source: info: unpacking twopaco_1.0.0+dfsg.orig.tar.xz dpkg-source: info: unpacking twopaco_1.0.0+dfsg-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/57212/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='1d27202f6c294e7cb017bcffd92c1a7e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='57212' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.jwRBpVNJ/pbuilderrc_njWu --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.jwRBpVNJ/b1 --logfile b1/build.log twopaco_1.0.0+dfsg-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos2-i386 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin I: user script /srv/workspace/pbuilder/57212/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libtbb-dev, libtclap-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19769 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libtbb-dev; however: Package libtbb-dev is not installed. pbuilder-satisfydepends-dummy depends on libtclap-dev; however: Package libtclap-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libhwloc15{a} libicu72{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtbb-dev{a} libtbb12{a} libtbbbind-2-5{a} libtbbmalloc2{a} libtclap-dev{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libhwloc-plugins libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 66 newly installed, 0 to remove and 0 not upgraded. Need to get 46.2 MB of archives. After unpacking 169 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-7 [66.0 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-7 [876 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.4-5 [96.5 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-7 [301 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-3 [862 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 cmake-data all 3.31.6-1 [2268 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-6 [9582 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b2 [734 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libarchive13t64 i386 3.7.4-1.1 [390 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b7 [299 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.21.3-4 [35.0 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.2-1 [24.3 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.21.3-4 [83.7 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 27 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.21.3-4 [354 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.21.3-4 [149 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-1 [458 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libidn2-0 i386 2.3.7-2+b1 [130 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-9 [20.8 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-9 [61.2 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 libldap2 i386 2.6.9+dfsg-1 [205 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 libnghttp3-9 i386 1.8.0-1 [78.7 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 libpsl5t64 i386 0.21.2-1.1+b1 [57.7 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.7-1 [21.4 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libp11-kit0 i386 0.25.5-3 [423 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libtasn1-6 i386 4.20.0-2 [51.6 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libgnutls30t64 i386 3.8.9-2 [1462 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b5 [62.4 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libssh2-1t64 i386 1.11.1-1 [256 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libcurl4t64 i386 8.12.1-3 [415 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libjsoncpp26 i386 1.9.6-3 [90.0 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 librhash1 i386 1.4.5-1 [144 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 libuv1t64 i386 1.50.0-2 [163 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 cmake i386 3.31.6-1 [13.1 MB] Get: 49 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-4 [539 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 55 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.1 [920 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libhwloc15 i386 2.12.0-1 [177 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 libtbbbind-2-5 i386 2022.0.0-2 [14.6 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libtbbmalloc2 i386 2022.0.0-2 [49.0 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libtbb12 i386 2022.0.0-2 [93.9 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libtbb-dev i386 2022.0.0-2 [199 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 libtclap-dev i386 1.2.5-1+b1 [3360 kB] Fetched 46.2 MB in 2s (20.4 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19769 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-7_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.4-7) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-7_i386.deb ... Unpacking procps (2:4.0.4-7) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.23.1-1_i386.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.40.4-5_i386.deb ... Unpacking bsdextrautils (2.40.4-5) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../10-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-7_i386.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package cmake-data. Preparing to unpack .../17-cmake-data_3.31.6-1_all.deb ... Unpacking cmake-data (3.31.6-1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../18-libicu72_72.1-6_i386.deb ... Unpacking libicu72:i386 (72.1-6) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../19-libxml2_2.12.7+dfsg+really2.9.14-0.2+b2_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b2) ... Selecting previously unselected package libarchive13t64:i386. Preparing to unpack .../20-libarchive13t64_3.7.4-1.1_i386.deb ... Unpacking libarchive13t64:i386 (3.7.4-1.1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../21-libbrotli1_1.1.0-2+b7_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b7) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../22-libkrb5support0_1.21.3-4_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-4) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../23-libcom-err2_1.47.2-1_i386.deb ... Unpacking libcom-err2:i386 (1.47.2-1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../24-libk5crypto3_1.21.3-4_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-4) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../25-libkeyutils1_1.6.3-4_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../26-libkrb5-3_1.21.3-4_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-4) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../27-libgssapi-krb5-2_1.21.3-4_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-4) ... Selecting previously unselected package libunistring5:i386. Preparing to unpack .../28-libunistring5_1.3-1_i386.deb ... Unpacking libunistring5:i386 (1.3-1) ... Selecting previously unselected package libidn2-0:i386. Preparing to unpack .../29-libidn2-0_2.3.7-2+b1_i386.deb ... Unpacking libidn2-0:i386 (2.3.7-2+b1) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../30-libsasl2-modules-db_2.1.28+dfsg1-9_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.28+dfsg1-9) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../31-libsasl2-2_2.1.28+dfsg1-9_i386.deb ... Unpacking libsasl2-2:i386 (2.1.28+dfsg1-9) ... Selecting previously unselected package libldap2:i386. Preparing to unpack .../32-libldap2_2.6.9+dfsg-1_i386.deb ... Unpacking libldap2:i386 (2.6.9+dfsg-1) ... Selecting previously unselected package libnghttp2-14:i386. Preparing to unpack .../33-libnghttp2-14_1.64.0-1_i386.deb ... Unpacking libnghttp2-14:i386 (1.64.0-1) ... Selecting previously unselected package libnghttp3-9:i386. Preparing to unpack .../34-libnghttp3-9_1.8.0-1_i386.deb ... Unpacking libnghttp3-9:i386 (1.8.0-1) ... Selecting previously unselected package libpsl5t64:i386. Preparing to unpack .../35-libpsl5t64_0.21.2-1.1+b1_i386.deb ... Unpacking libpsl5t64:i386 (0.21.2-1.1+b1) ... Selecting previously unselected package libffi8:i386. Preparing to unpack .../36-libffi8_3.4.7-1_i386.deb ... Unpacking libffi8:i386 (3.4.7-1) ... Selecting previously unselected package libp11-kit0:i386. Preparing to unpack .../37-libp11-kit0_0.25.5-3_i386.deb ... Unpacking libp11-kit0:i386 (0.25.5-3) ... Selecting previously unselected package libtasn1-6:i386. Preparing to unpack .../38-libtasn1-6_4.20.0-2_i386.deb ... Unpacking libtasn1-6:i386 (4.20.0-2) ... Selecting previously unselected package libgnutls30t64:i386. Preparing to unpack .../39-libgnutls30t64_3.8.9-2_i386.deb ... Unpacking libgnutls30t64:i386 (3.8.9-2) ... Selecting previously unselected package librtmp1:i386. Preparing to unpack .../40-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_i386.deb ... Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssh2-1t64:i386. Preparing to unpack .../41-libssh2-1t64_1.11.1-1_i386.deb ... Unpacking libssh2-1t64:i386 (1.11.1-1) ... Selecting previously unselected package libcurl4t64:i386. Preparing to unpack .../42-libcurl4t64_8.12.1-3_i386.deb ... Unpacking libcurl4t64:i386 (8.12.1-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../43-libexpat1_2.6.4-1_i386.deb ... Unpacking libexpat1:i386 (2.6.4-1) ... Selecting previously unselected package libjsoncpp26:i386. 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Setting up libtasn1-6:i386 (4.20.0-2) ... Setting up cmake-data (3.31.6-1) ... Setting up librhash1:i386 (1.4.5-1) ... Setting up libkrb5-3:i386 (1.21.3-4) ... Setting up libssh2-1t64:i386 (1.11.1-1) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b2) ... Setting up libldap2:i386 (2.6.9+dfsg-1) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-4) ... Setting up libidn2-0:i386 (2.3.7-2+b1) ... Setting up libtbbbind-2-5:i386 (2022.0.0-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libp11-kit0:i386 (0.25.5-3) ... Setting up libgssapi-krb5-2:i386 (1.21.3-4) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up libarchive13t64:i386 (3.7.4-1.1) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/twopaco-1.0.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../twopaco_1.0.0+dfsg-1_source.changes dpkg-buildpackage: info: source package twopaco dpkg-buildpackage: info: source version 1.0.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --sourcedir=src dh_auto_clean -O--sourcedir=src dh_autoreconf_clean -O--sourcedir=src dh_clean -O--sourcedir=src debian/rules binary dh binary --sourcedir=src dh_update_autotools_config -O--sourcedir=src dh_autoreconf -O--sourcedir=src dh_auto_configure -O--sourcedir=src cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu ../src -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (3.6s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu dh_auto_build -O--sourcedir=src cd obj-i686-linux-gnu && make -j11 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/twopaco-1.0.0+dfsg/src -B/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' make -f graphdump/CMakeFiles/graphdump.dir/build.make graphdump/CMakeFiles/graphdump.dir/depend make[3]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/twopaco-1.0.0+dfsg/src /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump/CMakeFiles/graphdump.dir/DependInfo.cmake "--color=" make -f graphconstructor/CMakeFiles/twopaco.dir/build.make graphconstructor/CMakeFiles/twopaco.dir/depend make[3]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/twopaco-1.0.0+dfsg/src /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor/CMakeFiles/twopaco.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' make -f graphconstructor/CMakeFiles/twopaco.dir/build.make graphconstructor/CMakeFiles/twopaco.dir/build make[3]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' make -f graphdump/CMakeFiles/graphdump.dir/build.make graphdump/CMakeFiles/graphdump.dir/build make[3]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' [ 7%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/constructor.cpp.o [ 14%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/constructor.cpp.o -MF CMakeFiles/twopaco.dir/constructor.cpp.o.d -o CMakeFiles/twopaco.dir/constructor.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/constructor.cpp cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o -MF CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o.d -o CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/common/dnachar.cpp [ 21%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/compressedstring.cpp.o [ 28%] Building CXX object graphdump/CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphdump/CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o -MF CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o.d -o CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/common/streamfastaparser.cpp [ 35%] Building CXX object graphdump/CMakeFiles/graphdump.dir/graphdump.cpp.o [ 42%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphdump/CMakeFiles/graphdump.dir/graphdump.cpp.o -MF CMakeFiles/graphdump.dir/graphdump.cpp.o.d -o CMakeFiles/graphdump.dir/graphdump.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o -MF CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o.d -o CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/concurrentbitvector.cpp [ 50%] Building CXX object graphdump/CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o [ 57%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphdump/CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o -MF CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o.d -o CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/common/dnachar.cpp cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/compressedstring.cpp.o -MF CMakeFiles/twopaco.dir/compressedstring.cpp.o.d -o CMakeFiles/twopaco.dir/compressedstring.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/compressedstring.cpp cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o -MF CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o.d -o CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/common/streamfastaparser.cpp [ 64%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/test.cpp.o [ 71%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/vertexenumerator.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/test.cpp.o -MF CMakeFiles/twopaco.dir/test.cpp.o.d -o CMakeFiles/twopaco.dir/test.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/test.cpp cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/vertexenumerator.cpp.o -MF CMakeFiles/twopaco.dir/vertexenumerator.cpp.o.d -o CMakeFiles/twopaco.dir/vertexenumerator.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/vertexenumerator.cpp [ 78%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o -MF CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o.d -o CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/common/spooky/SpookyV2.cpp [ 85%] Building CXX object graphconstructor/CMakeFiles/twopaco.dir/common.cpp.o cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/c++ -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor -I/build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/../common -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++14 -MD -MT graphconstructor/CMakeFiles/twopaco.dir/common.cpp.o -MF CMakeFiles/twopaco.dir/common.cpp.o.d -o CMakeFiles/twopaco.dir/common.cpp.o -c /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/common.cpp /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp: In function ‘void GenerateFastaOutput(const std::string&, const std::vector >&, size_t)’: /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp:519:32: warning: unsigned conversion from ‘int64_t’ {aka ‘long long int’} to ‘std::vector::size_type’ {aka ‘unsigned int’} changes value from ‘34359738368’ to ‘0’ [-Woverflow] 519 | std::vector seen(MAX_SEGMENT_NUMBER, 0); | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp: In instantiation of ‘void GenerateGfaOutput(const std::string&, const std::vector >&, size_t, bool, G) [with G = Gfa1Generator; std::string = std::__cxx11::basic_string; size_t = unsigned int]’: /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp:676:21: required from here 676 | GenerateGfaOutput(inputFileName.getValue(), seqFileName.getValue(), kvalue.getValue(), prefix.getValue(), Gfa1Generator()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp:401:32: warning: unsigned conversion from ‘int64_t’ {aka ‘long long int’} to ‘std::vector::size_type’ {aka ‘unsigned int’} changes value from ‘34359738368’ to ‘0’ [-Woverflow] 401 | std::vector seen(MAX_SEGMENT_NUMBER, 0); | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp: In instantiation of ‘void GenerateGfaOutput(const std::string&, const std::vector >&, size_t, bool, G) [with G = Gfa2Generator; std::string = std::__cxx11::basic_string; size_t = unsigned int]’: /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp:685:21: required from here 685 | GenerateGfaOutput(inputFileName.getValue(), seqFileName.getValue(), kvalue.getValue(), prefix.getValue(), Gfa2Generator()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphdump/graphdump.cpp:401:32: warning: unsigned conversion from ‘int64_t’ {aka ‘long long int’} to ‘std::vector::size_type’ {aka ‘unsigned int’} changes value from ‘34359738368’ to ‘0’ [-Woverflow] 401 | std::vector seen(MAX_SEGMENT_NUMBER, 0); | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/constructor.cpp: In function ‘int main(int, char**)’: /build/reproducible-path/twopaco-1.0.0+dfsg/src/graphconstructor/constructor.cpp:112:25: warning: conversion from ‘long long unsigned int’ to ‘unsigned int’ changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 112 | UINT64_MAX, | ^~~~~~~~~~ [ 92%] Linking CXX executable graphdump cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphdump && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphdump.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/graphdump.dir/link.d CMakeFiles/graphdump.dir/graphdump.cpp.o CMakeFiles/graphdump.dir/__/common/dnachar.cpp.o CMakeFiles/graphdump.dir/__/common/streamfastaparser.cpp.o -o graphdump -ltbb -lpthread make[3]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' [ 92%] Built target graphdump [100%] Linking CXX executable twopaco cd /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/graphconstructor && /usr/bin/cmake -E cmake_link_script CMakeFiles/twopaco.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/twopaco-1.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/twopaco.dir/link.d CMakeFiles/twopaco.dir/__/common/dnachar.cpp.o CMakeFiles/twopaco.dir/constructor.cpp.o CMakeFiles/twopaco.dir/concurrentbitvector.cpp.o CMakeFiles/twopaco.dir/compressedstring.cpp.o CMakeFiles/twopaco.dir/__/common/streamfastaparser.cpp.o CMakeFiles/twopaco.dir/test.cpp.o CMakeFiles/twopaco.dir/vertexenumerator.cpp.o CMakeFiles/twopaco.dir/__/common/spooky/SpookyV2.cpp.o CMakeFiles/twopaco.dir/common.cpp.o -o twopaco -ltbb -ltbbmalloc -ltbbmalloc_proxy -lpthread make[3]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' [100%] Built target twopaco make[2]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg' obj-*/graphconstructor/twopaco --test -f 34 example/example.fa ERROR at chr 0 pos 1, 1 != 0 ERROR at chr 0 pos 275, 1 != 0 ERROR at chr 0 pos 300, 1 != 0 ERROR at chr 0 pos 304, 1 != 0 ERROR at chr 0 pos 324, 1 != 0 ERROR at chr 0 pos 468, 1 != 0 ERROR at chr 0 pos 628, 1 != 0 ERROR at chr 0 pos 719, 1 != 0 ERROR at chr 0 pos 757, 1 != 0 ERROR at chr 0 pos 829, 1 != 0 ERROR at chr 0 pos 831, 1 != 0 ERROR at chr 0 pos 904, 1 != 0 ERROR at chr 0 pos 928, 1 != 0 ERROR at chr 0 pos 975, 1 != 0 ERROR at chr 0 pos 1007, 1 != 0 ERROR at chr 0 pos 1034, 1 != 0 ERROR at chr 0 pos 1148, 1 != 0 ERROR at chr 0 pos 1149, 1 != 0 ERROR at chr 0 pos 1234, 1 != 0 ERROR at chr 0 pos 1284, 1 != 0 ERROR at chr 0 pos 1328, 1 != 0 ERROR at chr 0 pos 1405, 1 != 0 ERROR at chr 0 pos 1437, 1 != 0 ERROR at chr 0 pos 1484, 1 != 0 ERROR at chr 0 pos 1533, 1 != 0 ERROR at chr 0 pos 1578, 1 != 0 ERROR at chr 0 pos 1604, 1 != 0 ERROR at chr 0 pos 1939, 1 != 0 ERROR at chr 0 pos 1954, 1 != 0 ERROR at chr 0 pos 2000, 1 != 0 ERROR at chr 0 pos 2026, 1 != 0 ERROR at chr 0 pos 2169, 1 != 0 ERROR at chr 0 pos 2195, 1 != 0 ERROR at chr 0 pos 2240, 1 != 0 ERROR at chr 0 pos 2277, 1 != 0 ERROR at chr 0 pos 2293, 1 != 0 ERROR at chr 0 pos 2317, 1 != 0 ERROR at chr 0 pos 2508, 1 != 0 ERROR at chr 0 pos 2514, 1 != 0 ERROR at chr 0 pos 2558, 1 != 0 ERROR at chr 0 pos 2620, 1 != 0 ERROR at chr 0 pos 2664, 1 != 0 ERROR at chr 0 pos 2676, 1 != 0 ERROR at chr 0 pos 2777, 1 != 0 ERROR at chr 0 pos 2808, 1 != 0 ERROR at chr 0 pos 2921, 1 != 0 ERROR at chr 0 pos 2940, 1 != 0 ERROR at chr 0 pos 2956, 1 != 0 ERROR at chr 0 pos 2997, 1 != 0 ERROR at chr 0 pos 3016, 1 != 0 ERROR at chr 0 pos 3191, 1 != 0 ERROR at chr 0 pos 3246, 1 != 0 ERROR at chr 0 pos 3272, 1 != 0 ERROR at chr 0 pos 3593, 1 != 0 ERROR at chr 0 pos 3598, 1 != 0 ERROR at chr 0 pos 3627, 1 != 0 ERROR at chr 0 pos 3726, 1 != 0 ERROR at chr 0 pos 3738, 1 != 0 ERROR at chr 0 pos 3763, 1 != 0 ERROR at chr 0 pos 3774, 1 != 0 ERROR at chr 0 pos 3854, 1 != 0 ERROR at chr 0 pos 3873, 1 != 0 ERROR at chr 0 pos 3909, 1 != 0 ERROR at chr 0 pos 4039, 1 != 0 ERROR at chr 0 pos 4046, 1 != 0 ERROR at chr 0 pos 4083, 1 != 0 ERROR at chr 0 pos 4109, 1 != 0 ERROR at chr 0 pos 4197, 1 != 0 ERROR at chr 0 pos 4291, 1 != 0 ERROR at chr 0 pos 4401, 1 != 0 ERROR at chr 0 pos 4413, 1 != 0 ERROR at chr 0 pos 4431, 1 != 0 ERROR at chr 0 pos 4596, 1 != 0 ERROR at chr 0 pos 4611, 1 != 0 ERROR at chr 0 pos 4781, 1 != 0 ERROR at chr 0 pos 4802, 1 != 0 ERROR at chr 0 pos 4921, 1 != 0 ERROR at chr 0 pos 4922, 1 != 0 ERROR at chr 0 pos 5008, 1 != 0 ERROR at chr 0 pos 5033, 1 != 0 ERROR at chr 0 pos 5056, 1 != 0 ERROR at chr 0 pos 5080, 1 != 0 ERROR at chr 0 pos 5146, 1 != 0 ERROR at chr 0 pos 5173, 1 != 0 ERROR at chr 0 pos 5263, 1 != 0 ERROR at chr 0 pos 5314, 1 != 0 ERROR at chr 0 pos 5351, 1 != 0 ERROR at chr 0 pos 5365, 1 != 0 ERROR at chr 0 pos 5369, 1 != 0 ERROR at chr 0 pos 5411, 1 != 0 ERROR at chr 0 pos 5485, 1 != 0 ERROR at chr 0 pos 5531, 1 != 0 ERROR at chr 0 pos 5553, 1 != 0 ERROR at chr 0 pos 5586, 1 != 0 ERROR at chr 0 pos 5700, 1 != 0 ERROR at chr 0 pos 5711, 1 != 0 ERROR at chr 0 pos 5712, 1 != 0 ERROR at chr 0 pos 5754, 1 != 0 ERROR at chr 0 pos 5798, 1 != 0 ERROR at chr 0 pos 5854, 1 != 0 ERROR at chr 0 pos 5890, 1 != 0 ERROR at chr 0 pos 6047, 1 != 0 ERROR at chr 0 pos 6147, 1 != 0 ERROR at chr 0 pos 6236, 1 != 0 ERROR at chr 0 pos 6407, 1 != 0 ERROR at chr 0 pos 6627, 1 != 0 ERROR at chr 0 pos 6720, 1 != 0 ERROR at chr 0 pos 6749, 1 != 0 ERROR at chr 0 pos 6753, 1 != 0 ERROR at chr 0 pos 6769, 1 != 0 ERROR at chr 0 pos 7013, 1 != 0 ERROR at chr 0 pos 7035, 1 != 0 ERROR at chr 0 pos 7049, 1 != 0 ERROR at chr 0 pos 7055, 1 != 0 ERROR at chr 0 pos 7062, 1 != 0 ERROR at chr 0 pos 7118, 1 != 0 ERROR at chr 0 pos 7151, 1 != 0 ERROR at chr 0 pos 7226, 1 != 0 ERROR at chr 0 pos 7358, 1 != 0 ERROR at chr 0 pos 7467, 1 != 0 ERROR at chr 0 pos 7556, 1 != 0 ERROR at chr 0 pos 7595, 1 != 0 ERROR at chr 0 pos 7618, 1 != 0 ERROR at chr 0 pos 7644, 1 != 0 ERROR at chr 0 pos 7684, 1 != 0 ERROR at chr 0 pos 7707, 1 != 0 ERROR at chr 0 pos 7728, 1 != 0 ERROR at chr 0 pos 7731, 1 != 0 ERROR at chr 0 pos 7824, 1 != 0 ERROR at chr 0 pos 7967, 1 != 0 ERROR at chr 0 pos 8019, 1 != 0 ERROR at chr 0 pos 8021, 1 != 0 ERROR at chr 0 pos 8028, 1 != 0 ERROR at chr 0 pos 8227, 1 != 0 ERROR at chr 0 pos 8323, 1 != 0 ERROR at chr 0 pos 8379, 1 != 0 ERROR at chr 0 pos 8399, 1 != 0 ERROR at chr 0 pos 8424, 1 != 0 ERROR at chr 0 pos 8432, 1 != 0 ERROR at chr 0 pos 8476, 1 != 0 ERROR at chr 0 pos 8480, 1 != 0 ERROR at chr 0 pos 8526, 1 != 0 ERROR at chr 0 pos 8613, 1 != 0 ERROR at chr 0 pos 8670, 1 != 0 ERROR at chr 0 pos 8676, 1 != 0 ERROR at chr 0 pos 8862, 1 != 0 ERROR at chr 0 pos 8950, 1 != 0 ERROR at chr 0 pos 8962, 1 != 0 ERROR at chr 0 pos 8971, 1 != 0 ERROR at chr 1 pos 1, 1 != 0 ERROR at chr 1 pos 39, 1 != 0 ERROR at chr 1 pos 148, 1 != 0 ERROR at chr 1 pos 149, 1 != 0 ERROR at chr 1 pos 336, 1 != 0 ERROR at chr 1 pos 479, 1 != 0 ERROR at chr 1 pos 486, 1 != 0 ERROR at chr 1 pos 506, 1 != 0 ERROR at chr 1 pos 639, 1 != 0 ERROR at chr 1 pos 730, 1 != 0 ERROR at chr 1 pos 769, 1 != 0 ERROR at chr 1 pos 808, 1 != 0 ERROR at chr 1 pos 818, 1 != 0 ERROR at chr 1 pos 852, 1 != 0 ERROR at chr 1 pos 939, 1 != 0 ERROR at chr 1 pos 1019, 1 != 0 ERROR at chr 1 pos 1048, 1 != 0 ERROR at chr 1 pos 1245, 1 != 0 ERROR at chr 1 pos 1256, 1 != 0 ERROR at chr 1 pos 1297, 1 != 0 ERROR at chr 1 pos 1418, 1 != 0 ERROR at chr 1 pos 1449, 1 != 0 ERROR at chr 1 pos 1497, 1 != 0 ERROR at chr 1 pos 1510, 1 != 0 ERROR at chr 1 pos 1512, 1 != 0 ERROR at chr 1 pos 1546, 1 != 0 ERROR at chr 1 pos 1591, 1 != 0 ERROR at chr 1 pos 1601, 1 != 0 ERROR at chr 1 pos 1612, 1 != 0 ERROR at chr 1 pos 1619, 1 != 0 ERROR at chr 1 pos 1798, 1 != 0 ERROR at chr 1 pos 1954, 1 != 0 ERROR at chr 1 pos 1969, 1 != 0 ERROR at chr 1 pos 2014, 1 != 0 ERROR at chr 1 pos 2178, 1 != 0 ERROR at chr 1 pos 2204, 1 != 0 ERROR at chr 1 pos 2250, 1 != 0 ERROR at chr 1 pos 2286, 1 != 0 ERROR at chr 1 pos 2297, 1 != 0 ERROR at chr 1 pos 2299, 1 != 0 ERROR at chr 1 pos 2301, 1 != 0 ERROR at chr 1 pos 2325, 1 != 0 ERROR at chr 1 pos 2517, 1 != 0 ERROR at chr 1 pos 2523, 1 != 0 ERROR at chr 1 pos 2568, 1 != 0 ERROR at chr 1 pos 2629, 1 != 0 ERROR at chr 1 pos 2668, 1 != 0 ERROR at chr 1 pos 2680, 1 != 0 ERROR at chr 1 pos 2782, 1 != 0 ERROR at chr 1 pos 2814, 1 != 0 ERROR at chr 1 pos 2927, 1 != 0 ERROR at chr 1 pos 2945, 1 != 0 ERROR at chr 1 pos 2969, 1 != 0 ERROR at chr 1 pos 3018, 1 != 0 ERROR at chr 1 pos 3187, 1 != 0 ERROR at chr 1 pos 3246, 1 != 0 ERROR at chr 1 pos 3264, 1 != 0 ERROR at chr 1 pos 3273, 1 != 0 ERROR at chr 1 pos 3284, 1 != 0 ERROR at chr 1 pos 3581, 1 != 0 ERROR at chr 1 pos 3599, 1 != 0 ERROR at chr 1 pos 3628, 1 != 0 ERROR at chr 1 pos 3727, 1 != 0 ERROR at chr 1 pos 3739, 1 != 0 ERROR at chr 1 pos 3772, 1 != 0 ERROR at chr 1 pos 3842, 1 != 0 ERROR at chr 1 pos 3844, 1 != 0 ERROR at chr 1 pos 3852, 1 != 0 ERROR at chr 1 pos 3872, 1 != 0 ERROR at chr 1 pos 4048, 1 != 0 ERROR at chr 1 pos 4070, 1 != 0 ERROR at chr 1 pos 4085, 1 != 0 ERROR at chr 1 pos 4111, 1 != 0 ERROR at chr 1 pos 4120, 1 != 0 ERROR at chr 1 pos 4197, 1 != 0 ERROR at chr 1 pos 4199, 1 != 0 ERROR at chr 1 pos 4292, 1 != 0 ERROR at chr 1 pos 4402, 1 != 0 ERROR at chr 1 pos 4413, 1 != 0 ERROR at chr 1 pos 4431, 1 != 0 ERROR at chr 1 pos 4455, 1 != 0 ERROR at chr 1 pos 4469, 1 != 0 ERROR at chr 1 pos 4495, 1 != 0 ERROR at chr 1 pos 4609, 1 != 0 ERROR at chr 1 pos 4798, 1 != 0 ERROR at chr 1 pos 4825, 1 != 0 ERROR at chr 1 pos 4919, 1 != 0 ERROR at chr 1 pos 4920, 1 != 0 ERROR at chr 1 pos 5004, 1 != 0 ERROR at chr 1 pos 5021, 1 != 0 ERROR at chr 1 pos 5030, 1 != 0 ERROR at chr 1 pos 5053, 1 != 0 ERROR at chr 1 pos 5076, 1 != 0 ERROR at chr 1 pos 5089, 1 != 0 ERROR at chr 1 pos 5170, 1 != 0 ERROR at chr 1 pos 5207, 1 != 0 ERROR at chr 1 pos 5261, 1 != 0 ERROR at chr 1 pos 5312, 1 != 0 ERROR at chr 1 pos 5348, 1 != 0 ERROR at chr 1 pos 5407, 1 != 0 ERROR at chr 1 pos 5481, 1 != 0 ERROR at chr 1 pos 5551, 1 != 0 ERROR at chr 1 pos 5587, 1 != 0 ERROR at chr 1 pos 5702, 1 != 0 ERROR at chr 1 pos 5713, 1 != 0 ERROR at chr 1 pos 5714, 1 != 0 ERROR at chr 1 pos 5751, 1 != 0 ERROR at chr 1 pos 5856, 1 != 0 ERROR at chr 1 pos 5892, 1 != 0 ERROR at chr 1 pos 5929, 1 != 0 ERROR at chr 1 pos 6051, 1 != 0 ERROR at chr 1 pos 6151, 1 != 0 ERROR at chr 1 pos 6239, 1 != 0 ERROR at chr 1 pos 6413, 1 != 0 ERROR at chr 1 pos 6596, 1 != 0 ERROR at chr 1 pos 6630, 1 != 0 ERROR at chr 1 pos 6670, 1 != 0 ERROR at chr 1 pos 6723, 1 != 0 ERROR at chr 1 pos 6751, 1 != 0 ERROR at chr 1 pos 6755, 1 != 0 ERROR at chr 1 pos 6771, 1 != 0 ERROR at chr 1 pos 6833, 1 != 0 ERROR at chr 1 pos 7015, 1 != 0 ERROR at chr 1 pos 7037, 1 != 0 ERROR at chr 1 pos 7051, 1 != 0 ERROR at chr 1 pos 7057, 1 != 0 ERROR at chr 1 pos 7073, 1 != 0 ERROR at chr 1 pos 7121, 1 != 0 ERROR at chr 1 pos 7232, 1 != 0 ERROR at chr 1 pos 7244, 1 != 0 ERROR at chr 1 pos 7362, 1 != 0 ERROR at chr 1 pos 7472, 1 != 0 ERROR at chr 1 pos 7561, 1 != 0 ERROR at chr 1 pos 7619, 1 != 0 ERROR at chr 1 pos 7646, 1 != 0 ERROR at chr 1 pos 7686, 1 != 0 ERROR at chr 1 pos 7709, 1 != 0 ERROR at chr 1 pos 7730, 1 != 0 ERROR at chr 1 pos 7733, 1 != 0 ERROR at chr 1 pos 7741, 1 != 0 ERROR at chr 1 pos 7783, 1 != 0 ERROR at chr 1 pos 7827, 1 != 0 ERROR at chr 1 pos 7969, 1 != 0 ERROR at chr 1 pos 8029, 1 != 0 ERROR at chr 1 pos 8224, 1 != 0 ERROR at chr 1 pos 8319, 1 != 0 ERROR at chr 1 pos 8373, 1 != 0 ERROR at chr 1 pos 8393, 1 != 0 ERROR at chr 1 pos 8424, 1 != 0 ERROR at chr 1 pos 8429, 1 != 0 ERROR at chr 1 pos 8515, 1 != 0 ERROR at chr 1 pos 8633, 1 != 0 ERROR at chr 1 pos 8664, 1 != 0 ERROR at chr 1 pos 8688, 1 != 0 ERROR at chr 1 pos 8845, 1 != 0 ERROR at chr 1 pos 8887, 1 != 0 ERROR at chr 1 pos 8938, 1 != 0 ERROR at chr 1 pos 8949, 1 != 0 ERROR at chr 2 pos 1, 1 != 0 ERROR at chr 2 pos 295, 1 != 0 ERROR at chr 2 pos 299, 1 != 0 ERROR at chr 2 pos 320, 1 != 0 ERROR at chr 2 pos 463, 1 != 0 ERROR at chr 2 pos 469, 1 != 0 ERROR at chr 2 pos 545, 1 != 0 ERROR at chr 2 pos 546, 1 != 0 ERROR at chr 2 pos 600, 1 != 0 ERROR at chr 2 pos 621, 1 != 0 ERROR at chr 2 pos 640, 1 != 0 ERROR at chr 2 pos 642, 1 != 0 ERROR at chr 2 pos 749, 1 != 0 ERROR at chr 2 pos 821, 1 != 0 ERROR at chr 2 pos 823, 1 != 0 ERROR at chr 2 pos 899, 1 != 0 ERROR at chr 2 pos 922, 1 != 0 ERROR at chr 2 pos 995, 1 != 0 ERROR at chr 2 pos 1001, 1 != 0 ERROR at chr 2 pos 1028, 1 != 0 ERROR at chr 2 pos 1116, 1 != 0 ERROR at chr 2 pos 1141, 1 != 0 ERROR at chr 2 pos 1142, 1 != 0 ERROR at chr 2 pos 1277, 1 != 0 ERROR at chr 2 pos 1320, 1 != 0 ERROR at chr 2 pos 1397, 1 != 0 ERROR at chr 2 pos 1429, 1 != 0 ERROR at chr 2 pos 1507, 1 != 0 ERROR at chr 2 pos 1570, 1 != 0 ERROR at chr 2 pos 1929, 1 != 0 ERROR at chr 2 pos 2015, 1 != 0 ERROR at chr 2 pos 2021, 1 != 0 ERROR at chr 2 pos 2063, 1 != 0 ERROR at chr 2 pos 2230, 1 != 0 ERROR at chr 2 pos 2255, 1 != 0 ERROR at chr 2 pos 2261, 1 != 0 ERROR at chr 2 pos 2277, 1 != 0 ERROR at chr 2 pos 2301, 1 != 0 ERROR at chr 2 pos 2451, 1 != 0 ERROR at chr 2 pos 2495, 1 != 0 ERROR at chr 2 pos 2501, 1 != 0 ERROR at chr 2 pos 2545, 1 != 0 ERROR at chr 2 pos 2650, 1 != 0 ERROR at chr 2 pos 2662, 1 != 0 ERROR at chr 2 pos 2795, 1 != 0 ERROR at chr 2 pos 2926, 1 != 0 ERROR at chr 2 pos 2942, 1 != 0 ERROR at chr 2 pos 2982, 1 != 0 ERROR at chr 2 pos 3002, 1 != 0 ERROR at chr 2 pos 3017, 1 != 0 ERROR at chr 2 pos 3023, 1 != 0 ERROR at chr 2 pos 3181, 1 != 0 ERROR at chr 2 pos 3234, 1 != 0 ERROR at chr 2 pos 3260, 1 != 0 ERROR at chr 2 pos 3304, 1 != 0 ERROR at chr 2 pos 3615, 1 != 0 ERROR at chr 2 pos 3710, 1 != 0 ERROR at chr 2 pos 3748, 1 != 0 ERROR at chr 2 pos 3759, 1 != 0 ERROR at chr 2 pos 3842, 1 != 0 ERROR at chr 2 pos 3861, 1 != 0 ERROR at chr 2 pos 3895, 1 != 0 ERROR at chr 2 pos 4025, 1 != 0 ERROR at chr 2 pos 4068, 1 != 0 ERROR at chr 2 pos 4095, 1 != 0 ERROR at chr 2 pos 4184, 1 != 0 ERROR at chr 2 pos 4281, 1 != 0 ERROR at chr 2 pos 4314, 1 != 0 ERROR at chr 2 pos 4394, 1 != 0 ERROR at chr 2 pos 4406, 1 != 0 ERROR at chr 2 pos 4408, 1 != 0 ERROR at chr 2 pos 4425, 1 != 0 ERROR at chr 2 pos 4499, 1 != 0 ERROR at chr 2 pos 4571, 1 != 0 ERROR at chr 2 pos 4590, 1 != 0 ERROR at chr 2 pos 4605, 1 != 0 ERROR at chr 2 pos 4798, 1 != 0 ERROR at chr 2 pos 4855, 1 != 0 ERROR at chr 2 pos 4917, 1 != 0 ERROR at chr 2 pos 4918, 1 != 0 ERROR at chr 2 pos 5005, 1 != 0 ERROR at chr 2 pos 5029, 1 != 0 ERROR at chr 2 pos 5052, 1 != 0 ERROR at chr 2 pos 5076, 1 != 0 ERROR at chr 2 pos 5095, 1 != 0 ERROR at chr 2 pos 5141, 1 != 0 ERROR at chr 2 pos 5198, 1 != 0 ERROR at chr 2 pos 5291, 1 != 0 ERROR at chr 2 pos 5313, 1 != 0 ERROR at chr 2 pos 5350, 1 != 0 ERROR at chr 2 pos 5364, 1 != 0 ERROR at chr 2 pos 5407, 1 != 0 ERROR at chr 2 pos 5413, 1 != 0 ERROR at chr 2 pos 5461, 1 != 0 ERROR at chr 2 pos 5485, 1 != 0 ERROR at chr 2 pos 5504, 1 != 0 ERROR at chr 2 pos 5507, 1 != 0 ERROR at chr 2 pos 5550, 1 != 0 ERROR at chr 2 pos 5711, 1 != 0 ERROR at chr 2 pos 5712, 1 != 0 ERROR at chr 2 pos 5798, 1 != 0 ERROR at chr 2 pos 5890, 1 != 0 ERROR at chr 2 pos 5979, 1 != 0 ERROR at chr 2 pos 5995, 1 != 0 ERROR at chr 2 pos 6150, 1 != 0 ERROR at chr 2 pos 6240, 1 != 0 ERROR at chr 2 pos 6414, 1 != 0 ERROR at chr 2 pos 6549, 1 != 0 ERROR at chr 2 pos 6569, 1 != 0 ERROR at chr 2 pos 6629, 1 != 0 ERROR at chr 2 pos 6722, 1 != 0 ERROR at chr 2 pos 6928, 1 != 0 ERROR at chr 2 pos 7055, 1 != 0 ERROR at chr 2 pos 7061, 1 != 0 ERROR at chr 2 pos 7068, 1 != 0 ERROR at chr 2 pos 7157, 1 != 0 ERROR at chr 2 pos 7361, 1 != 0 ERROR at chr 2 pos 7466, 1 != 0 ERROR at chr 2 pos 7557, 1 != 0 ERROR at chr 2 pos 7572, 1 != 0 ERROR at chr 2 pos 7596, 1 != 0 ERROR at chr 2 pos 7606, 1 != 0 ERROR at chr 2 pos 7621, 1 != 0 ERROR at chr 2 pos 7687, 1 != 0 ERROR at chr 2 pos 7711, 1 != 0 ERROR at chr 2 pos 7732, 1 != 0 ERROR at chr 2 pos 7735, 1 != 0 ERROR at chr 2 pos 7829, 1 != 0 ERROR at chr 2 pos 7942, 1 != 0 ERROR at chr 2 pos 7973, 1 != 0 ERROR at chr 2 pos 8025, 1 != 0 ERROR at chr 2 pos 8027, 1 != 0 ERROR at chr 2 pos 8034, 1 != 0 ERROR at chr 2 pos 8054, 1 != 0 ERROR at chr 2 pos 8231, 1 != 0 ERROR at chr 2 pos 8328, 1 != 0 ERROR at chr 2 pos 8427, 1 != 0 ERROR at chr 2 pos 8435, 1 != 0 ERROR at chr 2 pos 8479, 1 != 0 ERROR at chr 2 pos 8512, 1 != 0 ERROR at chr 2 pos 8615, 1 != 0 ERROR at chr 2 pos 8653, 1 != 0 ERROR at chr 2 pos 8673, 1 != 0 ERROR at chr 2 pos 8951, 1 != 0 ERROR at chr 2 pos 8963, 1 != 0 ERROR at chr 2 pos 8972, 1 != 0 ERROR at chr 3 pos 1, 1 != 0 ERROR at chr 3 pos 226, 1 != 0 ERROR at chr 3 pos 277, 1 != 0 ERROR at chr 3 pos 304, 1 != 0 ERROR at chr 3 pos 462, 1 != 0 ERROR at chr 3 pos 516, 1 != 0 ERROR at chr 3 pos 544, 1 != 0 ERROR at chr 3 pos 619, 1 != 0 ERROR at chr 3 pos 644, 1 != 0 ERROR at chr 3 pos 646, 1 != 0 ERROR at chr 3 pos 710, 1 != 0 ERROR at chr 3 pos 819, 1 != 0 ERROR at chr 3 pos 821, 1 != 0 ERROR at chr 3 pos 895, 1 != 0 ERROR at chr 3 pos 972, 1 != 0 ERROR at chr 3 pos 1000, 1 != 0 ERROR at chr 3 pos 1028, 1 != 0 ERROR at chr 3 pos 1144, 1 != 0 ERROR at chr 3 pos 1145, 1 != 0 ERROR at chr 3 pos 1168, 1 != 0 ERROR at chr 3 pos 1282, 1 != 0 ERROR at chr 3 pos 1327, 1 != 0 ERROR at chr 3 pos 1402, 1 != 0 ERROR at chr 3 pos 1482, 1 != 0 ERROR at chr 3 pos 1574, 1 != 0 ERROR at chr 3 pos 1601, 1 != 0 ERROR at chr 3 pos 1626, 1 != 0 ERROR at chr 3 pos 1953, 1 != 0 ERROR at chr 3 pos 1998, 1 != 0 ERROR at chr 3 pos 2024, 1 != 0 ERROR at chr 3 pos 2042, 1 != 0 ERROR at chr 3 pos 2072, 1 != 0 ERROR at chr 3 pos 2159, 1 != 0 ERROR at chr 3 pos 2188, 1 != 0 ERROR at chr 3 pos 2231, 1 != 0 ERROR at chr 3 pos 2269, 1 != 0 ERROR at chr 3 pos 2309, 1 != 0 ERROR at chr 3 pos 2500, 1 != 0 ERROR at chr 3 pos 2506, 1 != 0 ERROR at chr 3 pos 2551, 1 != 0 ERROR at chr 3 pos 2613, 1 != 0 ERROR at chr 3 pos 2659, 1 != 0 ERROR at chr 3 pos 2662, 1 != 0 ERROR at chr 3 pos 2672, 1 != 0 ERROR at chr 3 pos 2772, 1 != 0 ERROR at chr 3 pos 2804, 1 != 0 ERROR at chr 3 pos 2918, 1 != 0 ERROR at chr 3 pos 2938, 1 != 0 ERROR at chr 3 pos 2954, 1 != 0 ERROR at chr 3 pos 2994, 1 != 0 ERROR at chr 3 pos 3014, 1 != 0 ERROR at chr 3 pos 3190, 1 != 0 ERROR at chr 3 pos 3244, 1 != 0 ERROR at chr 3 pos 3387, 1 != 0 ERROR at chr 3 pos 3502, 1 != 0 ERROR at chr 3 pos 3587, 1 != 0 ERROR at chr 3 pos 3616, 1 != 0 ERROR at chr 3 pos 3679, 1 != 0 ERROR at chr 3 pos 3728, 1 != 0 ERROR at chr 3 pos 3753, 1 != 0 ERROR at chr 3 pos 3764, 1 != 0 ERROR at chr 3 pos 3898, 1 != 0 ERROR at chr 3 pos 3936, 1 != 0 ERROR at chr 3 pos 3972, 1 != 0 ERROR at chr 3 pos 4066, 1 != 0 ERROR at chr 3 pos 4071, 1 != 0 ERROR at chr 3 pos 4097, 1 != 0 ERROR at chr 3 pos 4186, 1 != 0 ERROR at chr 3 pos 4281, 1 != 0 ERROR at chr 3 pos 4360, 1 != 0 ERROR at chr 3 pos 4378, 1 != 0 ERROR at chr 3 pos 4384, 1 != 0 ERROR at chr 3 pos 4393, 1 != 0 ERROR at chr 3 pos 4405, 1 != 0 ERROR at chr 3 pos 4423, 1 != 0 ERROR at chr 3 pos 4544, 1 != 0 ERROR at chr 3 pos 4774, 1 != 0 ERROR at chr 3 pos 4794, 1 != 0 ERROR at chr 3 pos 4915, 1 != 0 ERROR at chr 3 pos 4916, 1 != 0 ERROR at chr 3 pos 5000, 1 != 0 ERROR at chr 3 pos 5026, 1 != 0 ERROR at chr 3 pos 5049, 1 != 0 ERROR at chr 3 pos 5073, 1 != 0 ERROR at chr 3 pos 5140, 1 != 0 ERROR at chr 3 pos 5148, 1 != 0 ERROR at chr 3 pos 5167, 1 != 0 ERROR at chr 3 pos 5194, 1 != 0 ERROR at chr 3 pos 5263, 1 != 0 ERROR at chr 3 pos 5350, 1 != 0 ERROR at chr 3 pos 5364, 1 != 0 ERROR at chr 3 pos 5368, 1 != 0 ERROR at chr 3 pos 5410, 1 != 0 ERROR at chr 3 pos 5460, 1 != 0 ERROR at chr 3 pos 5528, 1 != 0 ERROR at chr 3 pos 5552, 1 != 0 ERROR at chr 3 pos 5623, 1 != 0 ERROR at chr 3 pos 5701, 1 != 0 ERROR at chr 3 pos 5710, 1 != 0 ERROR at chr 3 pos 5757, 1 != 0 ERROR at chr 3 pos 5862, 1 != 0 ERROR at chr 3 pos 5893, 1 != 0 ERROR at chr 3 pos 6043, 1 != 0 ERROR at chr 3 pos 6141, 1 != 0 ERROR at chr 3 pos 6231, 1 != 0 ERROR at chr 3 pos 6398, 1 != 0 ERROR at chr 3 pos 6406, 1 != 0 ERROR at chr 3 pos 6430, 1 != 0 ERROR at chr 3 pos 6581, 1 != 0 ERROR at chr 3 pos 6622, 1 != 0 ERROR at chr 3 pos 6746, 1 != 0 ERROR at chr 3 pos 6750, 1 != 0 ERROR at chr 3 pos 7012, 1 != 0 ERROR at chr 3 pos 7033, 1 != 0 ERROR at chr 3 pos 7047, 1 != 0 ERROR at chr 3 pos 7053, 1 != 0 ERROR at chr 3 pos 7060, 1 != 0 ERROR at chr 3 pos 7077, 1 != 0 ERROR at chr 3 pos 7116, 1 != 0 ERROR at chr 3 pos 7149, 1 != 0 ERROR at chr 3 pos 7195, 1 != 0 ERROR at chr 3 pos 7228, 1 != 0 ERROR at chr 3 pos 7359, 1 != 0 ERROR at chr 3 pos 7453, 1 != 0 ERROR at chr 3 pos 7465, 1 != 0 ERROR at chr 3 pos 7621, 1 != 0 ERROR at chr 3 pos 7698, 1 != 0 ERROR at chr 3 pos 7710, 1 != 0 ERROR at chr 3 pos 7731, 1 != 0 ERROR at chr 3 pos 7734, 1 != 0 ERROR at chr 3 pos 7891, 1 != 0 ERROR at chr 3 pos 7966, 1 != 0 ERROR at chr 3 pos 8018, 1 != 0 ERROR at chr 3 pos 8020, 1 != 0 ERROR at chr 3 pos 8027, 1 != 0 ERROR at chr 3 pos 8182, 1 != 0 ERROR at chr 3 pos 8224, 1 != 0 ERROR at chr 3 pos 8296, 1 != 0 ERROR at chr 3 pos 8317, 1 != 0 ERROR at chr 3 pos 8372, 1 != 0 ERROR at chr 3 pos 8392, 1 != 0 ERROR at chr 3 pos 8398, 1 != 0 ERROR at chr 3 pos 8417, 1 != 0 ERROR at chr 3 pos 8454, 1 != 0 ERROR at chr 3 pos 8472, 1 != 0 ERROR at chr 3 pos 8610, 1 != 0 ERROR at chr 3 pos 8615, 1 != 0 ERROR at chr 3 pos 8668, 1 != 0 ERROR at chr 3 pos 8950, 1 != 0 ERROR at chr 4 pos 1, 1 != 0 ERROR at chr 4 pos 162, 1 != 0 ERROR at chr 4 pos 278, 1 != 0 ERROR at chr 4 pos 309, 1 != 0 ERROR at chr 4 pos 330, 1 != 0 ERROR at chr 4 pos 476, 1 != 0 ERROR at chr 4 pos 552, 1 != 0 ERROR at chr 4 pos 634, 1 != 0 ERROR at chr 4 pos 639, 1 != 0 ERROR at chr 4 pos 722, 1 != 0 ERROR at chr 4 pos 741, 1 != 0 ERROR at chr 4 pos 834, 1 != 0 ERROR at chr 4 pos 836, 1 != 0 ERROR at chr 4 pos 907, 1 != 0 ERROR at chr 4 pos 1011, 1 != 0 ERROR at chr 4 pos 1145, 1 != 0 ERROR at chr 4 pos 1155, 1 != 0 ERROR at chr 4 pos 1156, 1 != 0 ERROR at chr 4 pos 1160, 1 != 0 ERROR at chr 4 pos 1163, 1 != 0 ERROR at chr 4 pos 1200, 1 != 0 ERROR at chr 4 pos 1240, 1 != 0 ERROR at chr 4 pos 1289, 1 != 0 ERROR at chr 4 pos 1334, 1 != 0 ERROR at chr 4 pos 1445, 1 != 0 ERROR at chr 4 pos 1492, 1 != 0 ERROR at chr 4 pos 1586, 1 != 0 ERROR at chr 4 pos 1722, 1 != 0 ERROR at chr 4 pos 1917, 1 != 0 ERROR at chr 4 pos 1966, 1 != 0 ERROR at chr 4 pos 1967, 1 != 0 ERROR at chr 4 pos 2012, 1 != 0 ERROR at chr 4 pos 2038, 1 != 0 ERROR at chr 4 pos 2179, 1 != 0 ERROR at chr 4 pos 2204, 1 != 0 ERROR at chr 4 pos 2251, 1 != 0 ERROR at chr 4 pos 2288, 1 != 0 ERROR at chr 4 pos 2304, 1 != 0 ERROR at chr 4 pos 2328, 1 != 0 ERROR at chr 4 pos 2418, 1 != 0 ERROR at chr 4 pos 2521, 1 != 0 ERROR at chr 4 pos 2527, 1 != 0 ERROR at chr 4 pos 2574, 1 != 0 ERROR at chr 4 pos 2675, 1 != 0 ERROR at chr 4 pos 2687, 1 != 0 ERROR at chr 4 pos 2789, 1 != 0 ERROR at chr 4 pos 2821, 1 != 0 ERROR at chr 4 pos 2927, 1 != 0 ERROR at chr 4 pos 2941, 1 != 0 ERROR at chr 4 pos 2947, 1 != 0 ERROR at chr 4 pos 2963, 1 != 0 ERROR at chr 4 pos 3005, 1 != 0 ERROR at chr 4 pos 3084, 1 != 0 ERROR at chr 4 pos 3202, 1 != 0 ERROR at chr 4 pos 3257, 1 != 0 ERROR at chr 4 pos 3606, 1 != 0 ERROR at chr 4 pos 3634, 1 != 0 ERROR at chr 4 pos 3716, 1 != 0 ERROR at chr 4 pos 3735, 1 != 0 ERROR at chr 4 pos 3771, 1 != 0 ERROR at chr 4 pos 3782, 1 != 0 ERROR at chr 4 pos 3858, 1 != 0 ERROR at chr 4 pos 3877, 1 != 0 ERROR at chr 4 pos 3911, 1 != 0 ERROR at chr 4 pos 4047, 1 != 0 ERROR at chr 4 pos 4084, 1 != 0 ERROR at chr 4 pos 4117, 1 != 0 ERROR at chr 4 pos 4132, 1 != 0 ERROR at chr 4 pos 4266, 1 != 0 ERROR at chr 4 pos 4267, 1 != 0 ERROR at chr 4 pos 4374, 1 != 0 ERROR at chr 4 pos 4388, 1 != 0 ERROR at chr 4 pos 4389, 1 != 0 ERROR at chr 4 pos 4409, 1 != 0 ERROR at chr 4 pos 4421, 1 != 0 ERROR at chr 4 pos 4439, 1 != 0 ERROR at chr 4 pos 4516, 1 != 0 ERROR at chr 4 pos 4600, 1 != 0 ERROR at chr 4 pos 4638, 1 != 0 ERROR at chr 4 pos 4716, 1 != 0 ERROR at chr 4 pos 4770, 1 != 0 ERROR at chr 4 pos 4786, 1 != 0 ERROR at chr 4 pos 4806, 1 != 0 ERROR at chr 4 pos 4859, 1 != 0 ERROR at chr 4 pos 4927, 1 != 0 ERROR at chr 4 pos 4928, 1 != 0 ERROR at chr 4 pos 5042, 1 != 0 ERROR at chr 4 pos 5090, 1 != 0 ERROR at chr 4 pos 5177, 1 != 0 ERROR at chr 4 pos 5183, 1 != 0 ERROR at chr 4 pos 5326, 1 != 0 ERROR at chr 4 pos 5363, 1 != 0 ERROR at chr 4 pos 5377, 1 != 0 ERROR at chr 4 pos 5422, 1 != 0 ERROR at chr 4 pos 5495, 1 != 0 ERROR at chr 4 pos 5506, 1 != 0 ERROR at chr 4 pos 5541, 1 != 0 ERROR at chr 4 pos 5560, 1 != 0 ERROR at chr 4 pos 5594, 1 != 0 ERROR at chr 4 pos 5670, 1 != 0 ERROR at chr 4 pos 5721, 1 != 0 ERROR at chr 4 pos 5722, 1 != 0 ERROR at chr 4 pos 5810, 1 != 0 ERROR at chr 4 pos 5864, 1 != 0 ERROR at chr 4 pos 5902, 1 != 0 ERROR at chr 4 pos 6055, 1 != 0 ERROR at chr 4 pos 6154, 1 != 0 ERROR at chr 4 pos 6243, 1 != 0 ERROR at chr 4 pos 6416, 1 != 0 ERROR at chr 4 pos 6562, 1 != 0 ERROR at chr 4 pos 6634, 1 != 0 ERROR at chr 4 pos 6673, 1 != 0 ERROR at chr 4 pos 6726, 1 != 0 ERROR at chr 4 pos 6773, 1 != 0 ERROR at chr 4 pos 6901, 1 != 0 ERROR at chr 4 pos 7021, 1 != 0 ERROR at chr 4 pos 7042, 1 != 0 ERROR at chr 4 pos 7056, 1 != 0 ERROR at chr 4 pos 7062, 1 != 0 ERROR at chr 4 pos 7069, 1 != 0 ERROR at chr 4 pos 7104, 1 != 0 ERROR at chr 4 pos 7126, 1 != 0 ERROR at chr 4 pos 7159, 1 != 0 ERROR at chr 4 pos 7238, 1 != 0 ERROR at chr 4 pos 7245, 1 != 0 ERROR at chr 4 pos 7372, 1 != 0 ERROR at chr 4 pos 7479, 1 != 0 ERROR at chr 4 pos 7566, 1 != 0 ERROR at chr 4 pos 7573, 1 != 0 ERROR at chr 4 pos 7574, 1 != 0 ERROR at chr 4 pos 7629, 1 != 0 ERROR at chr 4 pos 7655, 1 != 0 ERROR at chr 4 pos 7694, 1 != 0 ERROR at chr 4 pos 7718, 1 != 0 ERROR at chr 4 pos 7739, 1 != 0 ERROR at chr 4 pos 7995, 1 != 0 ERROR at chr 4 pos 8028, 1 != 0 ERROR at chr 4 pos 8030, 1 != 0 ERROR at chr 4 pos 8038, 1 != 0 ERROR at chr 4 pos 8097, 1 != 0 ERROR at chr 4 pos 8378, 1 != 0 ERROR at chr 4 pos 8390, 1 != 0 ERROR at chr 4 pos 8410, 1 != 0 ERROR at chr 4 pos 8437, 1 != 0 ERROR at chr 4 pos 8445, 1 != 0 ERROR at chr 4 pos 8488, 1 != 0 ERROR at chr 4 pos 8492, 1 != 0 ERROR at chr 4 pos 8524, 1 != 0 ERROR at chr 4 pos 8537, 1 != 0 ERROR at chr 4 pos 8597, 1 != 0 ERROR at chr 4 pos 8678, 1 != 0 ERROR at chr 4 pos 8870, 1 != 0 ERROR at chr 4 pos 8958, 1 != 0 ERROR at chr 4 pos 8978, 1 != 0 ERROR at chr 5 pos 1, 1 != 0 ERROR at chr 5 pos 97, 1 != 0 ERROR at chr 5 pos 270, 1 != 0 ERROR at chr 5 pos 295, 1 != 0 ERROR at chr 5 pos 299, 1 != 0 ERROR at chr 5 pos 466, 1 != 0 ERROR at chr 5 pos 596, 1 != 0 ERROR at chr 5 pos 716, 1 != 0 ERROR at chr 5 pos 718, 1 != 0 ERROR at chr 5 pos 721, 1 != 0 ERROR at chr 5 pos 755, 1 != 0 ERROR at chr 5 pos 826, 1 != 0 ERROR at chr 5 pos 828, 1 != 0 ERROR at chr 5 pos 901, 1 != 0 ERROR at chr 5 pos 926, 1 != 0 ERROR at chr 5 pos 972, 1 != 0 ERROR at chr 5 pos 1003, 1 != 0 ERROR at chr 5 pos 1143, 1 != 0 ERROR at chr 5 pos 1144, 1 != 0 ERROR at chr 5 pos 1279, 1 != 0 ERROR at chr 5 pos 1323, 1 != 0 ERROR at chr 5 pos 1399, 1 != 0 ERROR at chr 5 pos 1431, 1 != 0 ERROR at chr 5 pos 1476, 1 != 0 ERROR at chr 5 pos 1574, 1 != 0 ERROR at chr 5 pos 1839, 1 != 0 ERROR at chr 5 pos 1956, 1 != 0 ERROR at chr 5 pos 2002, 1 != 0 ERROR at chr 5 pos 2005, 1 != 0 ERROR at chr 5 pos 2027, 1 != 0 ERROR at chr 5 pos 2066, 1 != 0 ERROR at chr 5 pos 2121, 1 != 0 ERROR at chr 5 pos 2170, 1 != 0 ERROR at chr 5 pos 2196, 1 != 0 ERROR at chr 5 pos 2241, 1 != 0 ERROR at chr 5 pos 2285, 1 != 0 ERROR at chr 5 pos 2297, 1 != 0 ERROR at chr 5 pos 2318, 1 != 0 ERROR at chr 5 pos 2487, 1 != 0 ERROR at chr 5 pos 2515, 1 != 0 ERROR at chr 5 pos 2521, 1 != 0 ERROR at chr 5 pos 2545, 1 != 0 ERROR at chr 5 pos 2563, 1 != 0 ERROR at chr 5 pos 2564, 1 != 0 ERROR at chr 5 pos 2628, 1 != 0 ERROR at chr 5 pos 2671, 1 != 0 ERROR at chr 5 pos 2682, 1 != 0 ERROR at chr 5 pos 2774, 1 != 0 ERROR at chr 5 pos 2778, 1 != 0 ERROR at chr 5 pos 2782, 1 != 0 ERROR at chr 5 pos 2812, 1 != 0 ERROR at chr 5 pos 2847, 1 != 0 ERROR at chr 5 pos 2941, 1 != 0 ERROR at chr 5 pos 2957, 1 != 0 ERROR at chr 5 pos 3019, 1 != 0 ERROR at chr 5 pos 3034, 1 != 0 ERROR at chr 5 pos 3160, 1 != 0 ERROR at chr 5 pos 3192, 1 != 0 ERROR at chr 5 pos 3274, 1 != 0 ERROR at chr 5 pos 3357, 1 != 0 ERROR at chr 5 pos 3358, 1 != 0 ERROR at chr 5 pos 3503, 1 != 0 ERROR at chr 5 pos 3586, 1 != 0 ERROR at chr 5 pos 3587, 1 != 0 ERROR at chr 5 pos 3598, 1 != 0 ERROR at chr 5 pos 3603, 1 != 0 ERROR at chr 5 pos 3633, 1 != 0 ERROR at chr 5 pos 3733, 1 != 0 ERROR at chr 5 pos 3745, 1 != 0 ERROR at chr 5 pos 3770, 1 != 0 ERROR at chr 5 pos 3781, 1 != 0 ERROR at chr 5 pos 3859, 1 != 0 ERROR at chr 5 pos 3871, 1 != 0 ERROR at chr 5 pos 3878, 1 != 0 ERROR at chr 5 pos 4042, 1 != 0 ERROR at chr 5 pos 4112, 1 != 0 ERROR at chr 5 pos 4201, 1 != 0 ERROR at chr 5 pos 4293, 1 != 0 ERROR at chr 5 pos 4405, 1 != 0 ERROR at chr 5 pos 4417, 1 != 0 ERROR at chr 5 pos 4435, 1 != 0 ERROR at chr 5 pos 4445, 1 != 0 ERROR at chr 5 pos 4602, 1 != 0 ERROR at chr 5 pos 4617, 1 != 0 ERROR at chr 5 pos 4684, 1 != 0 ERROR at chr 5 pos 4805, 1 != 0 ERROR at chr 5 pos 4894, 1 != 0 ERROR at chr 5 pos 4954, 1 != 0 ERROR at chr 5 pos 5013, 1 != 0 ERROR at chr 5 pos 5039, 1 != 0 ERROR at chr 5 pos 5062, 1 != 0 ERROR at chr 5 pos 5085, 1 != 0 ERROR at chr 5 pos 5153, 1 != 0 ERROR at chr 5 pos 5180, 1 != 0 ERROR at chr 5 pos 5270, 1 != 0 ERROR at chr 5 pos 5323, 1 != 0 ERROR at chr 5 pos 5375, 1 != 0 ERROR at chr 5 pos 5379, 1 != 0 ERROR at chr 5 pos 5421, 1 != 0 ERROR at chr 5 pos 5493, 1 != 0 ERROR at chr 5 pos 5540, 1 != 0 ERROR at chr 5 pos 5554, 1 != 0 ERROR at chr 5 pos 5561, 1 != 0 ERROR at chr 5 pos 5595, 1 != 0 ERROR at chr 5 pos 5655, 1 != 0 ERROR at chr 5 pos 5722, 1 != 0 ERROR at chr 5 pos 5723, 1 != 0 ERROR at chr 5 pos 5766, 1 != 0 ERROR at chr 5 pos 5810, 1 != 0 ERROR at chr 5 pos 5822, 1 != 0 ERROR at chr 5 pos 5865, 1 != 0 ERROR at chr 5 pos 5901, 1 != 0 ERROR at chr 5 pos 6021, 1 != 0 ERROR at chr 5 pos 6059, 1 != 0 ERROR at chr 5 pos 6120, 1 != 0 ERROR at chr 5 pos 6159, 1 != 0 ERROR at chr 5 pos 6336, 1 != 0 ERROR at chr 5 pos 6388, 1 != 0 ERROR at chr 5 pos 6429, 1 != 0 ERROR at chr 5 pos 6647, 1 != 0 ERROR at chr 5 pos 6725, 1 != 0 ERROR at chr 5 pos 6739, 1 != 0 ERROR at chr 5 pos 6762, 1 != 0 ERROR at chr 5 pos 6763, 1 != 0 ERROR at chr 5 pos 6769, 1 != 0 ERROR at chr 5 pos 6788, 1 != 0 ERROR at chr 5 pos 7034, 1 != 0 ERROR at chr 5 pos 7055, 1 != 0 ERROR at chr 5 pos 7076, 1 != 0 ERROR at chr 5 pos 7083, 1 != 0 ERROR at chr 5 pos 7168, 1 != 0 ERROR at chr 5 pos 7216, 1 != 0 ERROR at chr 5 pos 7248, 1 != 0 ERROR at chr 5 pos 7367, 1 != 0 ERROR at chr 5 pos 7383, 1 != 0 ERROR at chr 5 pos 7572, 1 != 0 ERROR at chr 5 pos 7618, 1 != 0 ERROR at chr 5 pos 7641, 1 != 0 ERROR at chr 5 pos 7667, 1 != 0 ERROR at chr 5 pos 7706, 1 != 0 ERROR at chr 5 pos 7729, 1 != 0 ERROR at chr 5 pos 7750, 1 != 0 ERROR at chr 5 pos 7753, 1 != 0 ERROR at chr 5 pos 7847, 1 != 0 ERROR at chr 5 pos 7987, 1 != 0 ERROR at chr 5 pos 8014, 1 != 0 ERROR at chr 5 pos 8034, 1 != 0 ERROR at chr 5 pos 8036, 1 != 0 ERROR at chr 5 pos 8241, 1 != 0 ERROR at chr 5 pos 8314, 1 != 0 ERROR at chr 5 pos 8335, 1 != 0 ERROR at chr 5 pos 8381, 1 != 0 ERROR at chr 5 pos 8391, 1 != 0 ERROR at chr 5 pos 8412, 1 != 0 ERROR at chr 5 pos 8439, 1 != 0 ERROR at chr 5 pos 8447, 1 != 0 ERROR at chr 5 pos 8492, 1 != 0 ERROR at chr 5 pos 8496, 1 != 0 ERROR at chr 5 pos 8541, 1 != 0 ERROR at chr 5 pos 8624, 1 != 0 ERROR at chr 5 pos 8654, 1 != 0 ERROR at chr 5 pos 8680, 1 != 0 ERROR at chr 5 pos 8686, 1 != 0 ERROR at chr 5 pos 8870, 1 != 0 ERROR at chr 5 pos 8958, 1 != 0 ERROR at chr 5 pos 8970, 1 != 0 ERROR at chr 5 pos 8979, 1 != 0 Test # 0 FAILED obj-*/graphconstructor/twopaco -f 20 -k 11 example/example.fa -o example/example.dbg Threads = 1 Vertex length = 11 Hash functions = 5 Filter size = 1048576 Capacity = 1 Files: example/example.fa -------------------------------------------------------------------------------- Round 0, 0:1048576 Pass Filling Filtering 1 0 0 2 0 0 True junctions count = 7 False junctions count = 0 Hash table size = 7 Candidate marks count = 16 -------------------------------------------------------------------------------- Reallocating bifurcations time: 0 True marks count: 16 Edges construction time: 0 -------------------------------------------------------------------------------- Distinct junctions = 7 TwoPaCo::buildGraphMain:: allocated with scalable_malloc; freeing. TwoPaCo::buildGraphMain:: Calling scalable_allocation_command(TBBMALLOC_CLEAN_ALL_BUFFERS, 0); obj-*/graphdump/graphdump -f dot example/example.dbg -k 11 > example/example.dot make[1]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedir=src dh_prep -O--sourcedir=src dh_auto_install --destdir=debian/twopaco/ -O--sourcedir=src cd obj-i686-linux-gnu && make -j11 install DESTDIR=/build/reproducible-path/twopaco-1.0.0\+dfsg/debian/twopaco AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/twopaco-1.0.0+dfsg/src -B/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RELEASE" -- Installing: /build/reproducible-path/twopaco-1.0.0+dfsg/debian/twopaco/usr/bin/graphdump -- Installing: /build/reproducible-path/twopaco-1.0.0+dfsg/debian/twopaco/usr/bin/twopaco make[1]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg/obj-i686-linux-gnu' dh_installdocs -O--sourcedir=src dh_installchangelogs -O--sourcedir=src debian/rules override_dh_installexamples make[1]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg' dh_installexamples --sourcedir=/build/reproducible-path/twopaco-1.0.0+dfsg make[1]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg' debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg' dh_installman --sourcedir=/build/reproducible-path/twopaco-1.0.0+dfsg make[1]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg' dh_installsystemduser -O--sourcedir=src dh_perl -O--sourcedir=src dh_link -O--sourcedir=src dh_strip_nondeterminism -O--sourcedir=src dh_compress -O--sourcedir=src dh_fixperms -O--sourcedir=src debian/rules override_dh_missing make[1]: Entering directory '/build/reproducible-path/twopaco-1.0.0+dfsg' dh_missing --list-missing dh_missing: warning: CMakeLists.txt exists in src but is not installed to anywhere dh_missing: warning: common/dnachar.cpp exists in src but is not installed to anywhere dh_missing: warning: common/dnachar.h exists in src but is not installed to anywhere dh_missing: warning: common/junctionapi.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/Makefile exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/README.md exists in src but is not installed to anywhere (related file: "/build/reproducible-path/twopaco-1.0.0+dfsg/example/README.md") dh_missing: warning: common/ngramhashing/characterhash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/cyclichash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example2.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example3.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example4.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/example64bits.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/generalhash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/mersennetwister.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/rabinkarphash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/speedtesting.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/threewisehash.h exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/unit.cpp exists in src but is not installed to anywhere dh_missing: warning: common/ngramhashing/ztimer.h exists in src but is not installed to anywhere dh_missing: warning: common/spooky/SpookyV2.cpp exists in src but is not installed to anywhere dh_missing: warning: common/spooky/SpookyV2.h exists in src but is not installed to anywhere dh_missing: warning: common/streamfastaparser.cpp exists in src but is not installed to anywhere dh_missing: warning: common/streamfastaparser.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/CMakeLists.txt exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/assemblyedgeconstructor.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/assemblyedgeconstructor.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/bifurcationstorage.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/candidateoccurence.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/common.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/common.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/compressedstring.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/compressedstring.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/concurrentbitvector.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/concurrentbitvector.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/constructor.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/test.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/test.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/vertexenumerator.cpp exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/vertexenumerator.h exists in src but is not installed to anywhere dh_missing: warning: graphconstructor/vertexrollinghash.h exists in src but is not installed to anywhere dh_missing: warning: graphdump/CMakeLists.txt exists in src but is not installed to anywhere dh_missing: warning: graphdump/glueGfa1.py exists in src but is not installed to anywhere dh_missing: warning: graphdump/glueGfa2.py exists in src but is not installed to anywhere dh_missing: warning: graphdump/graphdump.cpp exists in src but is not installed to anywhere dh_missing: warning: naiveconstructor/naiveconstructor.cpp exists in src but is not installed to anywhere While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * /build/reproducible-path/twopaco-1.0.0+dfsg/example/README.md with: * common/ngramhashing/README.md in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_installdocs: twopaco (0) * dh_installexamples: twopaco (10) * dh_installman: twopaco (2) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. make[1]: Leaving directory '/build/reproducible-path/twopaco-1.0.0+dfsg' dh_dwz -a -O--sourcedir=src dh_strip -a -O--sourcedir=src dh_makeshlibs -a -O--sourcedir=src dh_shlibdeps -a -O--sourcedir=src dh_installdeb -O--sourcedir=src dh_gencontrol -O--sourcedir=src dh_md5sums -O--sourcedir=src dh_builddeb -O--sourcedir=src dpkg-deb: building package 'twopaco-dbgsym' in '../twopaco-dbgsym_1.0.0+dfsg-1_i386.deb'. dpkg-deb: building package 'twopaco' in '../twopaco_1.0.0+dfsg-1_i386.deb'. dpkg-genbuildinfo --build=binary -O../twopaco_1.0.0+dfsg-1_i386.buildinfo dpkg-genchanges --build=binary -O../twopaco_1.0.0+dfsg-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/57212 and its subdirectories I: Current time: Sun Mar 9 05:25:40 -12 2025 I: pbuilder-time-stamp: 1741541140