Mon May 22 17:56:12 UTC 2023 I: starting to build mmdb/bookworm/armhf on jenkins on '2023-05-22 17:55' Mon May 22 17:56:12 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_11/792/console.log Mon May 22 17:56:12 UTC 2023 I: Downloading source for bookworm/mmdb=2.0.22-1 --2023-05-22 17:56:13-- http://cdn-fastly.deb.debian.org/debian/pool/main/m/mmdb/mmdb_2.0.22-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2018 (2.0K) [text/prs.lines.tag] Saving to: ‘mmdb_2.0.22-1.dsc’ 0K . 100% 174M=0s 2023-05-22 17:56:13 (174 MB/s) - ‘mmdb_2.0.22-1.dsc’ saved [2018/2018] Mon May 22 17:56:13 UTC 2023 I: mmdb_2.0.22-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: mmdb Binary: libmmdb2-dev, libmmdb2-0 Architecture: any Version: 2.0.22-1 Maintainer: Debian Science Maintainers Uploaders: Picca Frédéric-Emmanuel , Andrius Merkys Homepage: https://www.ccp4.ac.uk Standards-Version: 4.1.5 Vcs-Browser: https://salsa.debian.org/science-team/mmdb Vcs-Git: https://salsa.debian.org/science-team/mmdb.git Build-Depends: debhelper-compat (= 13) Package-List: libmmdb2-0 deb libs optional arch=any libmmdb2-dev deb libdevel optional arch=any Checksums-Sha1: 69c3b1dd00f5d44ea65b36d4e45e295b9c09ac8f 737837 mmdb_2.0.22.orig.tar.gz 78a7df664a0b0754260cfd2fcb7a387232110f08 2532 mmdb_2.0.22-1.debian.tar.xz Checksums-Sha256: a9646933ce9f34633e1ae4901f2383af0e5318d6490851328f5b6aa06195ab51 737837 mmdb_2.0.22.orig.tar.gz de0ac1063d76a8cfd93e2eb5953b18e83e853b83c816bd3fe5dd1b3b3e3ad71e 2532 mmdb_2.0.22-1.debian.tar.xz Files: 6f6331c863b00602f41ddd3d90447621 737837 mmdb_2.0.22.orig.tar.gz a7227fb3b349133f1b1a92485edf1365 2532 mmdb_2.0.22-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmIfNwMSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHl3oQAJXwG+4ba7Fkgrxtr/VFNbSm5nScx4hW E24RjKSXIXQs3aofWckkBLCzXeYNccEFoiq0XabWaa55cNUrhCGodSQq0FvI664f SDPjxqiOyJ8XMdEdYTNQRtVrRynr0fXA8ujFqczirGP07mjZY0tHPrAZbZEsZBGr HYMVH87MaqnqgFs1AES/a++jW+znm/X9t3rOAzC/FaXpgiY0KM1s9zpc5bld4MIj wxhQ5LbR7fhvOHcXbcTCHAndID/oCXOBpB0BrrVBQaH1xmbb+zd7M2s+eDo5/xTE cszLRibFlAZizSuUEdqWGtn0SdF14hH+mRm9GnXzlJXqLo+mipeXomHhR3zqM7bW CY8cfeNQEo2ZtiwsSOVZhxBTIkEmYoXypWnhmqWzRUlqOVBlgjnP5lIsvl8mY+rQ VVneeX+wvfimx1U80AS5hja3oU1BOgAe+UpR7LojJemsRWJ3kDHEZ2wBNqbKRLvM +JanRfWtpLdMZa6/rdmF6oVCBSG/FFqH/GcoooGeMoZE+WTP9Bj0EVGDXKEU4n9L m70wx2rmrw90fANM5dtT8ceYYf3T5Q9mDwvLJtxlsm71cVrucIXUffNcR8TLsKAo oO+ON1p0R/4q2TKMBOp0W3wh4tmTJUfPtbwOvfuLy3pfDr8HkjhkNqLYMW2U1I29 A3SVoRHJCacB =HsqF -----END PGP SIGNATURE----- Mon May 22 17:56:13 UTC 2023 I: Checking whether the package is not for us Mon May 22 17:56:13 UTC 2023 I: Starting 1st build on remote node virt32b-armhf-rb.debian.net. Mon May 22 17:56:13 UTC 2023 I: Preparing to do remote build '1' on virt32b-armhf-rb.debian.net. Mon May 22 18:03:11 UTC 2023 I: Deleting $TMPDIR on virt32b-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon May 22 05:56:23 -12 2023 I: pbuilder-time-stamp: 1684778183 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [mmdb_2.0.22-1.dsc] I: copying [./mmdb_2.0.22.orig.tar.gz] I: copying [./mmdb_2.0.22-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Mar 1 21:21:07 2022 -12 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./mmdb_2.0.22-1.dsc: no acceptable signature found dpkg-source: info: extracting mmdb in mmdb-2.0.22 dpkg-source: info: unpacking mmdb_2.0.22.orig.tar.gz dpkg-source: info: unpacking mmdb_2.0.22-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/11912/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='1cf32bfd963b4ba588190104f5adf083' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='11912' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.G4oByMQ2/pbuilderrc_WUMS --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.G4oByMQ2/b1 --logfile b1/build.log mmdb_2.0.22-1.dsc' SUDO_GID='112' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32b 5.10.0-23-armmp-lpae #1 SMP Debian 5.10.179-1 (2023-05-12) armv7l GNU/Linux I: ls -l /bin total 5072 -rwxr-xr-x 1 root root 838488 Apr 23 09:24 bash -rwxr-xr-x 3 root root 67144 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 67112 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 67632 Sep 20 2022 cat -rwxr-xr-x 1 root root 67676 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67644 Sep 20 2022 chmod -rwxr-xr-x 1 root root 67684 Sep 20 2022 chown -rwxr-xr-x 1 root root 133532 Sep 20 2022 cp -rwxr-xr-x 1 root root 132868 Jan 5 01:20 dash -rwxr-xr-x 1 root root 133220 Sep 20 2022 date -rwxr-xr-x 1 root root 67732 Sep 20 2022 dd -rwxr-xr-x 1 root root 68104 Sep 20 2022 df -rwxr-xr-x 1 root root 133632 Sep 20 2022 dir -rwxr-xr-x 1 root root 59128 Mar 22 21:02 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 67560 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 67548 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 55748 Mar 22 21:02 findmnt -rwsr-xr-x 1 root root 26208 Mar 22 20:15 fusermount -rwxr-xr-x 1 root root 128608 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 64220 Apr 9 2022 gzip -rwxr-xr-x 1 root root 67032 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 67720 Sep 20 2022 ln -rwxr-xr-x 1 root root 35132 Mar 22 21:51 login -rwxr-xr-x 1 root root 133632 Sep 20 2022 ls -rwxr-xr-x 1 root root 136808 Mar 22 21:02 lsblk -rwxr-xr-x 1 root root 67800 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 67764 Sep 20 2022 mknod -rwxr-xr-x 1 root root 67596 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 38504 Mar 22 21:02 more -rwsr-xr-x 1 root root 38496 Mar 22 21:02 mount -rwxr-xr-x 1 root root 9824 Mar 22 21:02 mountpoint -rwxr-xr-x 1 root root 133532 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 67608 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash -rwxr-xr-x 1 root root 67600 Sep 20 2022 readlink -rwxr-xr-x 1 root root 67672 Sep 20 2022 rm -rwxr-xr-x 1 root root 67600 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 67400 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133372 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 67584 Sep 20 2022 sleep -rwxr-xr-x 1 root root 67644 Sep 20 2022 stty -rwsr-xr-x 1 root root 50800 Mar 22 21:02 su -rwxr-xr-x 1 root root 67584 Sep 20 2022 sync -rwxr-xr-x 1 root root 336764 Apr 6 02:25 tar -rwxr-xr-x 1 root root 67144 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 133224 Sep 20 2022 touch -rwxr-xr-x 1 root root 67548 Sep 20 2022 true -rwxr-xr-x 1 root root 9768 Mar 22 20:15 ulockmgr_server -rwsr-xr-x 1 root root 22108 Mar 22 21:02 umount -rwxr-xr-x 1 root root 67572 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 133632 Sep 20 2022 vdir -rwxr-xr-x 1 root root 42608 Mar 22 21:02 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/11912/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 18.0 MB of archives. After unpacking 67.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main armhf sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB] Get: 3 http://deb.debian.org/debian bookworm/main armhf libmagic1 armhf 1:5.44-3 [96.5 kB] Get: 4 http://deb.debian.org/debian bookworm/main armhf file armhf 1:5.44-3 [41.6 kB] Get: 5 http://deb.debian.org/debian bookworm/main armhf gettext-base armhf 0.21-12 [157 kB] Get: 6 http://deb.debian.org/debian bookworm/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main armhf groff-base armhf 1.22.4-10 [825 kB] Get: 8 http://deb.debian.org/debian bookworm/main armhf bsdextrautils armhf 2.38.1-5+b1 [78.6 kB] Get: 9 http://deb.debian.org/debian bookworm/main armhf libpipeline1 armhf 1.5.7-1 [33.6 kB] Get: 10 http://deb.debian.org/debian bookworm/main armhf man-db armhf 2.11.2-2 [1351 kB] Get: 11 http://deb.debian.org/debian bookworm/main armhf m4 armhf 1.4.19-3 [265 kB] Get: 12 http://deb.debian.org/debian bookworm/main armhf autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian bookworm/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian bookworm/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian bookworm/main armhf autopoint all 0.21-12 [495 kB] Get: 16 http://deb.debian.org/debian bookworm/main armhf libdebhelper-perl all 13.11.4 [81.2 kB] Get: 17 http://deb.debian.org/debian bookworm/main armhf libtool all 2.4.7-5 [517 kB] Get: 18 http://deb.debian.org/debian bookworm/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian bookworm/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian bookworm/main armhf libsub-override-perl all 0.09-4 [9304 B] Get: 21 http://deb.debian.org/debian bookworm/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian bookworm/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian bookworm/main armhf libelf1 armhf 0.188-2.1 [170 kB] Get: 24 http://deb.debian.org/debian bookworm/main armhf dwz armhf 0.15-1 [101 kB] Get: 25 http://deb.debian.org/debian bookworm/main armhf libicu72 armhf 72.1-3 [9048 kB] Get: 26 http://deb.debian.org/debian bookworm/main armhf libxml2 armhf 2.9.14+dfsg-1.2 [591 kB] Get: 27 http://deb.debian.org/debian bookworm/main armhf gettext armhf 0.21-12 [1229 kB] Get: 28 http://deb.debian.org/debian bookworm/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian bookworm/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian bookworm/main armhf debhelper all 13.11.4 [942 kB] Fetched 18.0 MB in 2s (10.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19329 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.44-3_armhf.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../02-libmagic1_1%3a5.44-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.44-3_armhf.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-12_armhf.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.22.4-10_armhf.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.38.1-5+b1_armhf.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.11.2-2_armhf.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-3_armhf.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../22-libelf1_0.188-2.1_armhf.deb ... Unpacking libelf1:armhf (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1_armhf.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../24-libicu72_72.1-3_armhf.deb ... Unpacking libicu72:armhf (72.1-3) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.2_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-12_armhf.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... 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Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/mmdb-2.0.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../mmdb_2.0.22-1_source.changes dpkg-buildpackage: info: source package mmdb dpkg-buildpackage: info: source version 2.0.22-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --ddeb-migration='libmmdb2-0-dbg (<< 2.0.5-1~)' dh_autoreconf_clean "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_clean "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" debian/rules build dh build --ddeb-migration='libmmdb2-0-dbg (<< 2.0.5-1~)' dh_update_autotools_config "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_autoreconf "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'. libtoolize: copying file 'build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:21: warning: AC_OUTPUT should be used without arguments. configure.ac:21: You should run autoupdate. configure.ac:9: installing 'build-aux/compile' configure.ac:8: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/mmdb-2.0.22' dh_auto_configure -- --enable-shared --disable-static ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-shared --disable-static checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for ar... ar checking the archiver (ar) interface... ar checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for library containing cos... -lm checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating mmdb2.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/mmdb-2.0.22' dh_auto_build "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" make -j3 make[1]: Entering directory '/build/mmdb-2.0.22' make all-am make[2]: Entering directory '/build/mmdb-2.0.22' /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/hybrid_36.lo mmdb2/hybrid_36.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_io_stream.lo mmdb2/mmdb_io_stream.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_math_linalg.lo mmdb2/mmdb_math_linalg.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/hybrid_36.cpp -fPIC -DPIC -o mmdb2/.libs/hybrid_36.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_math_linalg.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_math_linalg.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_io_stream.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_io_stream.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_symop.lo mmdb2/mmdb_symop.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_symop.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_symop.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_atom.lo mmdb2/mmdb_atom.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_atom.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_atom.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_machine_.lo mmdb2/mmdb_machine_.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_machine_.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_machine_.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_math_rand.lo mmdb2/mmdb_math_rand.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_math_rand.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_math_rand.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_tables.lo mmdb2/mmdb_tables.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_tables.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_tables.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_bondmngr.lo mmdb2/mmdb_bondmngr.cpp mmdb2/mmdb_atom.cpp: In member function 'char* mmdb::Atom::GetAtomIDfmt(mmdb::pstr)': mmdb2/mmdb_atom.cpp:1390:30: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] 1390 | sprintf ( S,"%4s[%2s]:%1s",name,element,altLoc ); | ^ In file included from /usr/include/stdio.h:906, from mmdb2/mmdb_io_file.h:42, from mmdb2/mmdb_io_stream.h:42, from mmdb2/mmdb_chain.h:51, from mmdb2/mmdb_atom.cpp:47: In function 'int sprintf(char*, const char*, ...)', inlined from 'char* mmdb::Atom::GetAtomIDfmt(mmdb::pstr)' at mmdb2/mmdb_atom.cpp:1390:13: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 11 and 51 bytes into a destination of size 50 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_bondmngr.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_bondmngr.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_manager.lo mmdb2/mmdb_manager.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_manager.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_manager.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_mattype.lo mmdb2/mmdb_mattype.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_mattype.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_mattype.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_title.lo mmdb2/mmdb_title.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_chain.lo mmdb2/mmdb_chain.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_title.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_title.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_chain.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_chain.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_mask.lo mmdb2/mmdb_mask.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_mask.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_mask.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_mmcif_.lo mmdb2/mmdb_mmcif_.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_mmcif_.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_mmcif_.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_uddata.lo mmdb2/mmdb_uddata.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_uddata.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_uddata.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_cifdefs.lo mmdb2/mmdb_cifdefs.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_cifdefs.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_cifdefs.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_math_.lo mmdb2/mmdb_math_.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_math_.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_math_.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_model.lo mmdb2/mmdb_model.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_model.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_model.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_utils.lo mmdb2/mmdb_utils.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_utils.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_utils.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_coormngr.lo mmdb2/mmdb_coormngr.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_coormngr.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_coormngr.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_math_align.lo mmdb2/mmdb_math_align.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_math_align.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_math_align.o mmdb2/mmdb_model.cpp: In member function 'mmdb::Chain* mmdb::Model::GetChainCreate(const char*, bool)': mmdb2/mmdb_model.cpp:3069:46: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] 3069 | if (k) sprintf ( chainID,"%s%i",chID,k-1 ); | ^ In file included from /usr/include/stdio.h:906, from mmdb2/mmdb_io_file.h:42, from mmdb2/mmdb_io_stream.h:42, from mmdb2/mmdb_model.h:57, from mmdb2/mmdb_model.cpp:57: In function 'int sprintf(char*, const char*, ...)', inlined from 'mmdb::Chain* mmdb::Model::GetChainCreate(const char*, bool)' at mmdb2/mmdb_model.cpp:3069:31: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output 2 or more bytes (assuming 11) into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mmdb2/mmdb_model.cpp: In member function 'void mmdb::Model::MoveChain(mmdb::Chain*&, mmdb::PPAtom, mmdb::PPAtom, int&, int)': mmdb2/mmdb_model.cpp:4645:33: warning: '%i' directive writing between 1 and 10 bytes into a region of size between 0 and 9 [-Wformat-overflow=] 4645 | sprintf ( chainID,"%s_%i",m_chain->chainID,chain_ext ); | ^~ mmdb2/mmdb_model.cpp:4645:29: note: directive argument in the range [1, 2147483647] 4645 | sprintf ( chainID,"%s_%i",m_chain->chainID,chain_ext ); | ^~~~~~~ In function 'int sprintf(char*, const char*, ...)', inlined from 'void mmdb::Model::MoveChain(mmdb::Chain*&, mmdb::PPAtom, mmdb::PPAtom, int&, int)' at mmdb2/mmdb_model.cpp:4645:19: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 3 and 21 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mmdb2/mmdb_model.cpp: In member function 'void mmdb::Model::MoveChain(mmdb::Chain*&, mmdb::PPAtom, mmdb::PPAtom, int&, int)': mmdb2/mmdb_model.cpp:4665:37: warning: '%i' directive writing between 1 and 10 bytes into a region of size between 0 and 9 [-Wformat-overflow=] 4665 | else sprintf ( chainID,"%s_%i",m_chain->chainID,k ); | ^~ mmdb2/mmdb_model.cpp:4665:33: note: directive argument in the range [1, 2147483647] 4665 | else sprintf ( chainID,"%s_%i",m_chain->chainID,k ); | ^~~~~~~ In function 'int sprintf(char*, const char*, ...)', inlined from 'void mmdb::Model::MoveChain(mmdb::Chain*&, mmdb::PPAtom, mmdb::PPAtom, int&, int)' at mmdb2/mmdb_model.cpp:4665:23: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 3 and 21 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mmdb2/mmdb_model.cpp: In member function 'void mmdb::Model::MoveChain(mmdb::Chain*&, mmdb::PPAtom, mmdb::PPAtom, int&, int)': mmdb2/mmdb_model.cpp:4663:37: warning: '%i' directive writing between 1 and 10 bytes into a region of size between 0 and 9 [-Wformat-overflow=] 4663 | sprintf ( chainID,"%s_%i_%i",m_chain->chainID, | ^~ mmdb2/mmdb_model.cpp:4663:33: note: directive argument in the range [1, 2147483647] 4663 | sprintf ( chainID,"%s_%i_%i",m_chain->chainID, | ^~~~~~~~~~ mmdb2/mmdb_model.cpp:4663:33: note: directive argument in the range [1, 2147483647] In function 'int sprintf(char*, const char*, ...)', inlined from 'void mmdb::Model::MoveChain(mmdb::Chain*&, mmdb::PPAtom, mmdb::PPAtom, int&, int)' at mmdb2/mmdb_model.cpp:4663:23: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 5 and 32 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_root.lo mmdb2/mmdb_root.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_root.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_root.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_xml_.lo mmdb2/mmdb_xml_.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_xml_.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_xml_.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_cryst.lo mmdb2/mmdb_cryst.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_cryst.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_cryst.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_math_bfgsmin.lo mmdb2/mmdb_math_bfgsmin.cpp mmdb2/mmdb_root.cpp: In member function 'int mmdb::Root::GenerateNCSMates()': mmdb2/mmdb_root.cpp:1420:43: warning: '%i' directive writing between 1 and 10 bytes into a region of size between 0 and 9 [-Wformat-overflow=] 1420 | sprintf ( chainID,"%s_%i", | ^~ mmdb2/mmdb_root.cpp:1420:39: note: directive argument in the range [1, 2147483647] 1420 | sprintf ( chainID,"%s_%i", | ^~~~~~~ In file included from /usr/include/stdio.h:906, from mmdb2/mmdb_io_file.h:42, from mmdb2/mmdb_root.h:44, from mmdb2/mmdb_root.cpp:44: In function 'int sprintf(char*, const char*, ...)', inlined from 'int mmdb::Root::GenerateNCSMates()' at mmdb2/mmdb_root.cpp:1420:29: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 3 and 21 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_math_bfgsmin.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_math_bfgsmin.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_rwbrook.lo mmdb2/mmdb_rwbrook.cpp mmdb2/mmdb_cryst.cpp: In member function 'int mmdb::Cryst::FixSpaceGroup()': mmdb2/mmdb_cryst.cpp:703:41: warning: '%s' directive writing up to 99 bytes into a region of size 94 [-Wformat-overflow=] 703 | sprintf ( spaceGroupFix,"%c 1 1 %s",spaceGroup[0], | ^~ In file included from /usr/include/stdio.h:906, from mmdb2/mmdb_io_file.h:42, from mmdb2/mmdb_io_stream.h:42, from mmdb2/mmdb_cryst.h:46, from mmdb2/mmdb_cryst.cpp:47: In function 'int sprintf(char*, const char*, ...)', inlined from 'int mmdb::Cryst::FixSpaceGroup()' at mmdb2/mmdb_cryst.cpp:703:17: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 7 and 106 bytes into a destination of size 100 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mmdb2/mmdb_cryst.cpp: In member function 'int mmdb::Cryst::FixSpaceGroup()': mmdb2/mmdb_cryst.cpp:697:39: warning: '%s' directive writing up to 99 bytes into a region of size 96 [-Wformat-overflow=] 697 | sprintf ( spaceGroupFix,"%c 1 %s 1",spaceGroup[0], | ^~ In function 'int sprintf(char*, const char*, ...)', inlined from 'int mmdb::Cryst::FixSpaceGroup()' at mmdb2/mmdb_cryst.cpp:697:17: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 7 and 106 bytes into a destination of size 100 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_rwbrook.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_rwbrook.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_ficif.lo mmdb2/mmdb_ficif.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_ficif.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_ficif.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_math_fft.lo mmdb2/mmdb_math_fft.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_math_fft.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_math_fft.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_selmngr.lo mmdb2/mmdb_selmngr.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_selmngr.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_selmngr.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_io_file.lo mmdb2/mmdb_io_file.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_io_file.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_io_file.o /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_math_graph.lo mmdb2/mmdb_math_graph.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_math_graph.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_math_graph.o mmdb2/mmdb_io_file.cpp: In member function 'void mmdb::io::File::truncate(long int)': mmdb2/mmdb_io_file.cpp:280:18: warning: ignoring return value of 'int truncate(const char*, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 280 | ::truncate ( FName,size ); | ~~~~~~~~~~~^~~~~~~~~~~~~~ /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mmdb2/mmdb_seqsuperpose.lo mmdb2/mmdb_seqsuperpose.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -c mmdb2/mmdb_seqsuperpose.cpp -fPIC -DPIC -o mmdb2/.libs/mmdb_seqsuperpose.o mmdb2/mmdb_math_graph.cpp: In member function 'void mmdb::math::GraphMatch::FreeMemory()': mmdb2/mmdb_math_graph.cpp:1660:18: warning: 'void operator delete [](void*)' called on pointer '*this.mmdb::math::GraphMatch::P' with nonzero offset 4 [-Wfree-nonheap-object] 1660 | delete[] P; | ^ /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/mmdb-2.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -no-undefined -Wl,-z,relro -o mmdb2/libmmdb2.la -rpath /usr/lib/arm-linux-gnueabihf mmdb2/hybrid_36.lo mmdb2/mmdb_io_stream.lo mmdb2/mmdb_math_linalg.lo mmdb2/mmdb_symop.lo mmdb2/mmdb_atom.lo mmdb2/mmdb_machine_.lo mmdb2/mmdb_math_rand.lo mmdb2/mmdb_tables.lo mmdb2/mmdb_bondmngr.lo mmdb2/mmdb_manager.lo mmdb2/mmdb_mattype.lo mmdb2/mmdb_title.lo mmdb2/mmdb_chain.lo mmdb2/mmdb_mask.lo mmdb2/mmdb_mmcif_.lo mmdb2/mmdb_uddata.lo mmdb2/mmdb_cifdefs.lo mmdb2/mmdb_math_.lo mmdb2/mmdb_model.lo mmdb2/mmdb_utils.lo mmdb2/mmdb_coormngr.lo mmdb2/mmdb_math_align.lo mmdb2/mmdb_root.lo mmdb2/mmdb_xml_.lo mmdb2/mmdb_cryst.lo mmdb2/mmdb_math_bfgsmin.lo mmdb2/mmdb_rwbrook.lo mmdb2/mmdb_ficif.lo mmdb2/mmdb_math_fft.lo mmdb2/mmdb_selmngr.lo mmdb2/mmdb_io_file.lo mmdb2/mmdb_math_graph.lo mmdb2/mmdb_seqsuperpose.lo -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/12/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/12/crtbeginS.o mmdb2/.libs/hybrid_36.o mmdb2/.libs/mmdb_io_stream.o mmdb2/.libs/mmdb_math_linalg.o mmdb2/.libs/mmdb_symop.o mmdb2/.libs/mmdb_atom.o mmdb2/.libs/mmdb_machine_.o mmdb2/.libs/mmdb_math_rand.o mmdb2/.libs/mmdb_tables.o mmdb2/.libs/mmdb_bondmngr.o mmdb2/.libs/mmdb_manager.o mmdb2/.libs/mmdb_mattype.o mmdb2/.libs/mmdb_title.o mmdb2/.libs/mmdb_chain.o mmdb2/.libs/mmdb_mask.o mmdb2/.libs/mmdb_mmcif_.o mmdb2/.libs/mmdb_uddata.o mmdb2/.libs/mmdb_cifdefs.o mmdb2/.libs/mmdb_math_.o mmdb2/.libs/mmdb_model.o mmdb2/.libs/mmdb_utils.o mmdb2/.libs/mmdb_coormngr.o mmdb2/.libs/mmdb_math_align.o mmdb2/.libs/mmdb_root.o mmdb2/.libs/mmdb_xml_.o mmdb2/.libs/mmdb_cryst.o mmdb2/.libs/mmdb_math_bfgsmin.o mmdb2/.libs/mmdb_rwbrook.o mmdb2/.libs/mmdb_ficif.o mmdb2/.libs/mmdb_math_fft.o mmdb2/.libs/mmdb_selmngr.o mmdb2/.libs/mmdb_io_file.o mmdb2/.libs/mmdb_math_graph.o mmdb2/.libs/mmdb_seqsuperpose.o -L/usr/lib/gcc/arm-linux-gnueabihf/12 -L/usr/lib/gcc/arm-linux-gnueabihf/12/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/12/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/12/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/12/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-soname -Wl,libmmdb2.so.0 -o mmdb2/.libs/libmmdb2.so.0.0.0 libtool: link: (cd "mmdb2/.libs" && rm -f "libmmdb2.so.0" && ln -s "libmmdb2.so.0.0.0" "libmmdb2.so.0") libtool: link: (cd "mmdb2/.libs" && rm -f "libmmdb2.so" && ln -s "libmmdb2.so.0.0.0" "libmmdb2.so") libtool: link: ( cd "mmdb2/.libs" && rm -f "libmmdb2.la" && ln -s "../libmmdb2.la" "libmmdb2.la" ) make[2]: Leaving directory '/build/mmdb-2.0.22' make[1]: Leaving directory '/build/mmdb-2.0.22' dh_auto_test "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" make -j3 check "TESTSUITEFLAGS=-j3 --verbose" VERBOSE=1 make[1]: Entering directory '/build/mmdb-2.0.22' make[1]: Leaving directory '/build/mmdb-2.0.22' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --ddeb-migration='libmmdb2-0-dbg (<< 2.0.5-1~)' dh_testroot "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_prep "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_auto_install "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" make -j1 install DESTDIR=/build/mmdb-2.0.22/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/mmdb-2.0.22' make[2]: Entering directory '/build/mmdb-2.0.22' /bin/mkdir -p '/build/mmdb-2.0.22/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ./libtool --mode=install /usr/bin/install -c mmdb2/libmmdb2.la '/build/mmdb-2.0.22/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c mmdb2/.libs/libmmdb2.so.0.0.0 /build/mmdb-2.0.22/debian/tmp/usr/lib/arm-linux-gnueabihf/libmmdb2.so.0.0.0 libtool: install: (cd /build/mmdb-2.0.22/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libmmdb2.so.0.0.0 libmmdb2.so.0 || { rm -f libmmdb2.so.0 && ln -s libmmdb2.so.0.0.0 libmmdb2.so.0; }; }) libtool: install: (cd /build/mmdb-2.0.22/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libmmdb2.so.0.0.0 libmmdb2.so || { rm -f libmmdb2.so && ln -s libmmdb2.so.0.0.0 libmmdb2.so; }; }) libtool: install: /usr/bin/install -c mmdb2/.libs/libmmdb2.lai /build/mmdb-2.0.22/debian/tmp/usr/lib/arm-linux-gnueabihf/libmmdb2.la libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/build/mmdb-2.0.22/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/install -c -m 644 mmdb2.pc '/build/mmdb-2.0.22/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /bin/mkdir -p '/build/mmdb-2.0.22/debian/tmp/usr/include/mmdb2' /usr/bin/install -c -m 644 mmdb2/hybrid_36.h mmdb2/mmdb_io_file.h mmdb2/mmdb_math_graph.h mmdb2/mmdb_seqsuperpose.h mmdb2/mmdb_atom.h mmdb2/mmdb_io_stream.h mmdb2/mmdb_math_linalg.h mmdb2/mmdb_symop.h mmdb2/mmdb_bondmngr.h mmdb2/mmdb_machine_.h mmdb2/mmdb_math_rand.h mmdb2/mmdb_tables.h mmdb2/mmdb_chain.h mmdb2/mmdb_manager.h mmdb2/mmdb_mattype.h mmdb2/mmdb_title.h mmdb2/mmdb_cifdefs.h mmdb2/mmdb_mask.h mmdb2/mmdb_mmcif_.h mmdb2/mmdb_uddata.h mmdb2/mmdb_coormngr.h mmdb2/mmdb_math_.h mmdb2/mmdb_model.h mmdb2/mmdb_utils.h mmdb2/mmdb_cryst.h mmdb2/mmdb_math_align.h mmdb2/mmdb_root.h mmdb2/mmdb_xml_.h mmdb2/mmdb_defs.h mmdb2/mmdb_math_bfgsmin.h mmdb2/mmdb_rwbrook.h mmdb2/mmdb_ficif.h mmdb2/mmdb_math_fft.h mmdb2/mmdb_selmngr.h '/build/mmdb-2.0.22/debian/tmp/usr/include/mmdb2' make[2]: Leaving directory '/build/mmdb-2.0.22' make[1]: Leaving directory '/build/mmdb-2.0.22' debian/rules override_dh_install make[1]: Entering directory '/build/mmdb-2.0.22' # libmmdb2-0 dh_installdocs -p libmmdb2-0 README dh_install -p libmmdb2-0 usr/lib/*/libmmdb2.so.* # libmmdb2-dev dh_install -p libmmdb2-dev usr/include/mmdb2/* dh_install -p libmmdb2-dev usr/lib/*/libmmdb2*.so dh_install -p libmmdb2-dev usr/lib/*/pkgconfig/mmdb2.pc make[1]: Leaving directory '/build/mmdb-2.0.22' dh_installdocs "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_installchangelogs "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_installsystemduser "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_perl "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_link "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_strip_nondeterminism "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_compress "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_fixperms "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_missing "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_dwz -a "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_strip -a "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_makeshlibs -a "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_shlibdeps -a "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_installdeb "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_gencontrol "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_md5sums "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dh_builddeb "-O--ddeb-migration=libmmdb2-0-dbg (<< 2.0.5-1~)" dpkg-deb: building package 'libmmdb2-0' in '../libmmdb2-0_2.0.22-1_armhf.deb'. dpkg-deb: building package 'libmmdb2-0-dbgsym' in '../libmmdb2-0-dbgsym_2.0.22-1_armhf.deb'. dpkg-deb: building package 'libmmdb2-dev' in '../libmmdb2-dev_2.0.22-1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../mmdb_2.0.22-1_armhf.buildinfo dpkg-genchanges --build=binary -O../mmdb_2.0.22-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/11912 and its subdirectories I: Current time: Mon May 22 06:02:49 -12 2023 I: pbuilder-time-stamp: 1684778569 Mon May 22 18:03:13 UTC 2023 I: 1st build successful. Starting 2nd build on remote node jtx1c-armhf-rb.debian.net. Mon May 22 18:03:13 UTC 2023 I: Preparing to do remote build '2' on jtx1c-armhf-rb.debian.net. Mon May 22 18:05:31 UTC 2023 I: Deleting $TMPDIR on jtx1c-armhf-rb.debian.net. Mon May 22 18:05:34 UTC 2023 I: mmdb_2.0.22-1_armhf.changes: Format: 1.8 Date: Wed, 02 Mar 2022 03:56:11 -0500 Source: mmdb Binary: libmmdb2-0 libmmdb2-0-dbgsym libmmdb2-dev Architecture: armhf Version: 2.0.22-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Andrius Merkys Description: libmmdb2-0 - macromolecular coordinate library - runtime libmmdb2-dev - macromolecular coordinate library - development files Changes: mmdb (2.0.22-1) unstable; urgency=medium . * New upstream version 2.0.22 * Updating copyright years. * Updating homepage, trimming license text. Checksums-Sha1: ac274f6901fe893ddc83b296be2d40a96be31e1d 876796 libmmdb2-0-dbgsym_2.0.22-1_armhf.deb ba4a3e3a9541274c584ba6110b12cba7ca1e1f1c 277264 libmmdb2-0_2.0.22-1_armhf.deb f6b2f64007483808394f0b03920123965eac6819 92640 libmmdb2-dev_2.0.22-1_armhf.deb a0ef538de1ff628e0b9b39b13240276b6b1d832f 5261 mmdb_2.0.22-1_armhf.buildinfo Checksums-Sha256: 203930f35b719b910efb479a0ac6d58dce8b916640054365126bd6dadb60430f 876796 libmmdb2-0-dbgsym_2.0.22-1_armhf.deb ba3811ff13199940db1afbbcdd574a13b645f529b28969cc0b6d79ef813a71a2 277264 libmmdb2-0_2.0.22-1_armhf.deb 32f1da9127f32511f9e4859f05776ad4157b2326520ea6e6ae12f506e8b9c7c3 92640 libmmdb2-dev_2.0.22-1_armhf.deb 0243fe26caef748d39899e26cd7b0d41ad74c073ac8d9705158196e083e51f2a 5261 mmdb_2.0.22-1_armhf.buildinfo Files: 37895478278bf1abe6f49756e0ccd0b3 876796 debug optional libmmdb2-0-dbgsym_2.0.22-1_armhf.deb 611073007d6b826cc3935b9b83213b9c 277264 libs optional libmmdb2-0_2.0.22-1_armhf.deb 8bb4a9d2651d47f59d759cb99a43e22a 92640 libdevel optional libmmdb2-dev_2.0.22-1_armhf.deb ae38c697635c05196cb50308a8bb19a7 5261 science optional mmdb_2.0.22-1_armhf.buildinfo Mon May 22 18:05:35 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.G4oByMQ2/mmdb_2.0.22-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.G4oByMQ2/mmdb_2.0.22-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.G4oByMQ2/mmdb_2.0.22-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.G4oByMQ2/b1/mmdb_2.0.22-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.G4oByMQ2/b2/mmdb_2.0.22-1_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.331s) 0.331s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.029s) 0.029s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Mon May 22 18:05:36 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Mon May 22 18:05:36 UTC 2023 I: mmdb from bookworm built successfully and reproducibly on armhf. Mon May 22 18:05:38 UTC 2023 I: Submitting .buildinfo files to external archives: Mon May 22 18:05:38 UTC 2023 I: Submitting 8.0K b1/mmdb_2.0.22-1_armhf.buildinfo.asc Mon May 22 18:05:39 UTC 2023 I: Submitting 8.0K b2/mmdb_2.0.22-1_armhf.buildinfo.asc Mon May 22 18:05:40 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon May 22 18:05:40 UTC 2023 I: Done submitting .buildinfo files. Mon May 22 18:05:40 UTC 2023 I: Removing signed mmdb_2.0.22-1_armhf.buildinfo.asc files: removed './b1/mmdb_2.0.22-1_armhf.buildinfo.asc' removed './b2/mmdb_2.0.22-1_armhf.buildinfo.asc'