Sat Jul 10 00:23:25 UTC 2021 I: starting to build debian-med/bullseye/arm64 on jenkins on '2021-07-10 00:23' Sat Jul 10 00:23:25 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_7/8715/console.log Sat Jul 10 00:23:25 UTC 2021 I: Downloading source for bullseye/debian-med=3.7 --2021-07-10 00:23:26-- http://cdn-fastly.deb.debian.org/debian/pool/main/d/debian-med/debian-med_3.7.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2929 (2.9K) Saving to: ‘debian-med_3.7.dsc’ 0K .. 100% 166M=0s 2021-07-10 00:23:26 (166 MB/s) - ‘debian-med_3.7.dsc’ saved [2929/2929] Sat Jul 10 00:23:26 UTC 2021 I: debian-med_3.7.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (native) Source: debian-med Binary: med-tasks, med-config, med-all, med-bio, med-bio-dev, med-cloud, med-data, med-dental, med-epi, med-his, med-imaging, med-imaging-dev, med-laboratory, med-oncology, med-pharmacy, med-physics, med-practice, med-psychology, med-research, med-statistics, med-tools, med-typesetting Architecture: all Version: 3.7 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/blends-team/med Vcs-Git: https://salsa.debian.org/blends-team/med.git Build-Depends: debhelper-compat (= 13) Build-Depends-Indep: blends-dev (>= 0.7.2~) Package-List: med-all deb metapackages optional arch=all med-bio deb metapackages optional arch=all med-bio-dev deb metapackages optional arch=all med-cloud deb metapackages optional arch=all med-config deb misc optional arch=all med-data deb metapackages optional arch=all med-dental deb metapackages optional arch=all med-epi deb metapackages optional arch=all med-his deb metapackages optional arch=all med-imaging deb metapackages optional arch=all med-imaging-dev deb metapackages optional arch=all med-laboratory deb metapackages optional arch=all med-oncology deb metapackages optional arch=all med-pharmacy deb metapackages optional arch=all med-physics deb metapackages optional arch=all med-practice deb metapackages optional arch=all med-psychology deb metapackages optional arch=all med-research deb metapackages optional arch=all med-statistics deb metapackages optional arch=all med-tasks deb misc optional arch=all med-tools deb metapackages optional arch=all med-typesetting deb metapackages optional arch=all Checksums-Sha1: 76fe289482d70f81a7d18979907a49ae7879cdac 123592 debian-med_3.7.tar.xz Checksums-Sha256: ecbadd49f5c40fc89a8dadfe0ea2a3dcd4cd1af126aec0af5d71c5852b7db246 123592 debian-med_3.7.tar.xz Files: 5cc743be443d176f20e4d226268d0c00 123592 debian-med_3.7.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmCQ3fARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHsjw//bP01SQOCqVcBPPJVlYEO88Wl0mKvgprH pfT1wPkdhNai8Es/qfxudOdxbdaA6mEemo/iESDWegs81yO+1tMlE1zd94uXy22y C7WfNp1L/mYIG8VYizHlFHT3TLZsAzVFMeABMl9nNYEqQIyTBsMecP8SDW5tefeT SxSRoU8NH+BOgMxPT5Yj5UILZe9NligyRrjaz3v5m4Cw5xJ9H049Nzni3TLZfKhV 0on57w1E9JHnxiYPC5jiUtUTI2i9S5fjqtrbcUwcglrAWrFxmwi0gqPvsPqT2ywY wNsXy3kEPqaZEDAr0WjhbpOzRmoSFx2+uYQ8d2Eozg1zvhwSon00LPjh1I6JzgsN AGIBG4016z0BupxOxhYde19gL22pBCAYz1KZrkfXrK1F8vmsHRo3+02NXA/JtRgV Cq4mA0Ona4J+Rg2cQ0VS7psJ0DtpZNhJ4K/sSXkH3il9FKS8tkpSCch7/bg4WLNk VOQwbSHpcahx/gRVV9kZdmUqRUmBA0z+dLTifZfbRuFN02Sh+ziyrSIzFjj95o+g 9KNxywk/P5m71kyGPsAmsdjRi00AQ+y6YTlQfeZkeRZqlr470sBIw25Bcpjy65zV vxdK6apfHmlzMGBpSwiEtkxnXWlkJy5sYNefwx6+YgJ5M3Nv21skxZbEhl3wsiLc 13Rdg7xeY70= =iyen -----END PGP SIGNATURE----- Sat Jul 10 00:23:26 UTC 2021 I: Checking whether the package is not for us Sat Jul 10 00:23:26 UTC 2021 I: Starting 1st build on remote node codethink10-arm64.debian.net. Sat Jul 10 00:23:26 UTC 2021 I: Preparing to do remote build '1' on codethink10-arm64.debian.net. Sat Jul 10 00:24:55 UTC 2021 I: Deleting $TMPDIR on codethink10-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jul 9 12:23:31 -12 2021 I: pbuilder-time-stamp: 1625876611 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [debian-med_3.7.dsc] I: copying [./debian-med_3.7.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.77A8aetV/trustedkeys.kbx': General error gpgv: Signature made Mon May 3 17:38:56 2021 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./debian-med_3.7.dsc dpkg-source: info: extracting debian-med in debian-med-3.7 dpkg-source: info: unpacking debian-med_3.7.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/23138/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='23138' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.6yv4TUbmm9/pbuilderrc_paxD --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.6yv4TUbmm9/b1 --logfile b1/build.log debian-med_3.7.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink10-arm64 4.15.0-147-generic #151-Ubuntu SMP Fri Jun 18 19:18:37 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Jun 21 14:26 bash -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash -rwxr-xr-x 1 root root 101384 Sep 22 2020 date -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd -rwxr-xr-x 1 root root 89824 Sep 22 2020 df -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir -rwxr-xr-x 1 root root 76152 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 31512 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 64856 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 34824 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 178400 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 93744 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 18440 Nov 6 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln -rwxr-xr-x 1 root root 52720 Feb 7 2020 login -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls -rwxr-xr-x 1 root root 161960 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 51368 Feb 7 02:38 more -rwsr-xr-x 1 root root 51360 Feb 7 02:38 mount -rwxr-xr-x 1 root root 14496 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 8 21:24 sh -> dash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Feb 7 02:38 su -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync -rwxr-xr-x 1 root root 535768 Feb 16 21:55 tar -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch -rwxr-xr-x 1 root root 31512 Sep 22 2020 true -rwxr-xr-x 1 root root 14264 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 30880 Feb 7 02:38 umount -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir -rwxr-xr-x 1 root root 59584 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/23138/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), blends-dev (>= 0.7.2~) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on blends-dev (>= 0.7.2~); however: Package blends-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blends-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} distro-info-data{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu67{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libmagic-mgc{a} libmagic1{a} libmpdec3{a} libpipeline1{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python-apt-common{a} python3{a} python3-apt{a} python3-blends{a} python3-chardet{a} python3-debian{a} python3-minimal{a} python3-pkg-resources{a} python3-six{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl iso-codes javascript-common libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lsb-release lynx python3-psycopg2 wget 0 packages upgraded, 55 newly installed, 0 to remove and 0 not upgraded. Need to get 24.6 MB of archives. After unpacking 92.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-7 [141 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-minimal arm64 3.9.2-1 [797 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2 [83.1 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 python3.9-minimal arm64 3.9.2-1 [1884 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 python3-minimal arm64 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 libmpdec3 arm64 2.5.1-1 [84.4 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 libreadline8 arm64 8.1-1 [160 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-stdlib arm64 3.9.2-1 [1658 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 python3.9 arm64 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 libpython3-stdlib arm64 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 python3 arm64 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3 [69.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 python-apt-common all 2.2.0 [96.3 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 distro-info-data all 0.50 [7460 B] Get: 46 http://deb.debian.org/debian bullseye/main arm64 python3-apt arm64 2.2.0 [183 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 python3-pkg-resources all 52.0.0-4 [190 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 python3-chardet all 4.0.0-1 [99.0 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 python3-six all 1.16.0-1 [17.1 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 python3-debian all 0.1.39 [80.1 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 python3-blends all 0.7.2 [36.2 kB] Get: 55 http://deb.debian.org/debian bullseye/main arm64 blends-dev all 0.7.2 [32.7 kB] Fetched 24.6 MB in 1s (38.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-7_arm64.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../1-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_arm64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../3-libpipeline1_1.5.3-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../4-man-db_2.9.4-2_arm64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libpython3.9-minimal:arm64. Preparing to unpack .../5-libpython3.9-minimal_3.9.2-1_arm64.deb ... Unpacking libpython3.9-minimal:arm64 (3.9.2-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../6-libexpat1_2.2.10-2_arm64.deb ... Unpacking libexpat1:arm64 (2.2.10-2) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../7-python3.9-minimal_3.9.2-1_arm64.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:arm64 (3.9.2-1) ... Setting up libexpat1:arm64 (2.2.10-2) ... Setting up python3.9-minimal (3.9.2-1) ... 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Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:arm64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up distro-info-data (0.50) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libmagic1:arm64 (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up python-apt-common (2.2.0) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libmpdec3:arm64 (2.5.1-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up libelf1:arm64 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7) ... Setting up libjs-underscore (1.9.1~dfsg-3) ... Setting up libfile-stripnondeterminism-perl (1.11.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libreadline8:arm64 (8.1-1) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.11.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libpython3.9-stdlib:arm64 (3.9.2-1) ... Setting up libpython3-stdlib:arm64 (3.9.2-3) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up python3.9 (3.9.2-1) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up python3-six (1.16.0-1) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up python3-apt (2.2.0) ... Setting up python3-chardet (4.0.0-1) ... Setting up python3-debian (0.1.39) ... Setting up python3-blends (0.7.2) ... Setting up blends-dev (0.7.2) ... Processing triggers for libc-bin (2.31-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/debian-med-3.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../debian-med_3.7_source.changes dpkg-buildpackage: info: source package debian-med dpkg-buildpackage: info: source version 3.7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/debian-med-3.7' # call make clean instead of distclean make clean make[2]: Entering directory '/build/debian-med-3.7' rm -rf tmp rm -f tasks/*~ rm -rf tasksel rm -f packages.txt by_vote packages-sorted.txt rm -f debian/*-config.postinst debian/*-config.preinst debian/*-config.postrm debian/*-config.prerm make[2]: Leaving directory '/build/debian-med-3.7' make[1]: Leaving directory '/build/debian-med-3.7' debian/rules override_dh_clean make[1]: Entering directory '/build/debian-med-3.7' # hmmm, that would kill debian/control - so don't do this! # /usr/bin/make -f /usr/share/blends-dev/Makefile clean # Clear apt-get cache rm -rf tmp # Remove backup files from source tarball rm -f tasks/*~ # Remove auto generated post{inst,rm} scripts; but only if an according *.stub file exists for task in `ls tasks | grep -v '^[a-z]*:$*' | grep -v '^$'` ; do \ rm -f debian/med-${task}.postinst debian/med-${task}.prerm ; \ done # rm -f debian/med-*.postinst debian/med-*.prerm debian/med-*.postrm debian/med-*.preinst # remove auto generated files for config package rm -f debian/med-config.templates debian/med-config.config \ debian/med-config.install debian/med-config.links \ debian/90med-config # remove auto generated debconf template translations rm -rf debian/po # remove possibly remaining debhelper files rm -f debian/med-*.debhelper.log dh_clean make[1]: Leaving directory '/build/debian-med-3.7' debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/debian-med-3.7' # do nothing, we just called the make install target in advance # and want to build the packages without network access make[1]: Leaving directory '/build/debian-med-3.7' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install debian/rules override_dh_install make[1]: Entering directory '/build/debian-med-3.7' /usr/share/blends-dev/blend-install-helper dh_install debian-med-tasks.desc usr/share/tasksel/descs make[1]: Leaving directory '/build/debian-med-3.7' debian/rules override_dh_installdocs make[1]: Entering directory '/build/debian-med-3.7' dh_installdocs -A README make[1]: Leaving directory '/build/debian-med-3.7' dh_installchangelogs dh_installman dh_installdebconf dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'med-bio' in '../med-bio_3.7_all.deb'. dpkg-deb: building package 'med-data' in '../med-data_3.7_all.deb'. dpkg-deb: building package 'med-tasks' in '../med-tasks_3.7_all.deb'. dpkg-deb: building package 'med-his' in '../med-his_3.7_all.deb'. dpkg-deb: building package 'med-laboratory' in '../med-laboratory_3.7_all.deb'. dpkg-deb: building package 'med-research' in '../med-research_3.7_all.deb'. dpkg-deb: building package 'med-typesetting' in '../med-typesetting_3.7_all.deb'. dpkg-deb: building package 'med-physics' in '../med-physics_3.7_all.deb'. dpkg-deb: building package 'med-config' in '../med-config_3.7_all.deb'. dpkg-deb: building package 'med-dental' in '../med-dental_3.7_all.deb'. dpkg-deb: building package 'med-oncology' in '../med-oncology_3.7_all.deb'. dpkg-deb: building package 'med-imaging' in '../med-imaging_3.7_all.deb'. dpkg-deb: building package 'med-statistics' in '../med-statistics_3.7_all.deb'. dpkg-deb: building package 'med-practice' in '../med-practice_3.7_all.deb'. dpkg-deb: building package 'med-bio-dev' in '../med-bio-dev_3.7_all.deb'. dpkg-deb: building package 'med-epi' in '../med-epi_3.7_all.deb'. dpkg-deb: building package 'med-pharmacy' in '../med-pharmacy_3.7_all.deb'. dpkg-deb: building package 'med-psychology' in '../med-psychology_3.7_all.deb'. dpkg-deb: building package 'med-all' in '../med-all_3.7_all.deb'. dpkg-deb: building package 'med-cloud' in '../med-cloud_3.7_all.deb'. dpkg-deb: building package 'med-tools' in '../med-tools_3.7_all.deb'. dpkg-deb: building package 'med-imaging-dev' in '../med-imaging-dev_3.7_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../debian-med_3.7_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/23138 and its subdirectories I: Current time: Fri Jul 9 12:24:54 -12 2021 I: pbuilder-time-stamp: 1625876694 Sat Jul 10 00:24:55 UTC 2021 I: 1st build successful. Starting 2nd build on remote node codethink13-arm64.debian.net. Sat Jul 10 00:24:55 UTC 2021 I: Preparing to do remote build '2' on codethink13-arm64.debian.net. Sat Jul 10 00:25:47 UTC 2021 I: Deleting $TMPDIR on codethink13-arm64.debian.net. Sat Jul 10 00:25:48 UTC 2021 I: debian-med_3.7_arm64.changes: Format: 1.8 Date: Mon, 03 May 2021 21:28:56 +0200 Source: debian-med Binary: med-all med-bio med-bio-dev med-cloud med-config med-data med-dental med-epi med-his med-imaging med-imaging-dev med-laboratory med-oncology med-pharmacy med-physics med-practice med-psychology med-research med-statistics med-tasks med-tools med-typesetting Architecture: all Version: 3.7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: med-all - Default selection of tasks for Debian Med med-bio - Debian Med bioinformatics packages med-bio-dev - Debian Med packages for development of bioinformatics application med-cloud - Debian Med bioinformatics applications usable in cloud computing med-config - Debian Med general config package med-data - Debian Med drug databases med-dental - Debian Med packages related to dental practice med-epi - Debian Med epidemiology related packages med-his - Debian Med suggestions for Hospital Information Systems med-imaging - Debian Med image processing and visualization packages med-imaging-dev - Debian Med image processing and visualization packages developmen med-laboratory - Debian Med suggestions for medical laboratories med-oncology - Debian Med packages for oncology med-pharmacy - Debian Med packages for pharmaceutical research med-physics - Debian Med packages for medical physicists med-practice - Debian Med packages for practice management med-psychology - Debian Med packages for psychology med-research - Debian Med packages for medical research med-statistics - Debian Med statistics med-tasks - Debian Med tasks for tasksel med-tools - Debian Med several tools med-typesetting - Debian Med support for typesetting and publishing Changes: debian-med (3.7) unstable; urgency=medium . * Re-render metapackages according the package pool in bullseye . * start of automatic changelog entry * . * Changes in metapackage dependencies -med-bio added: Recommends: bio-vcf, uncalled, covpipe, fastani, bioawk, bamclipper Suggests: r-bioc-structuralvariantannotation -med-bio-dev added: Recommends: libbio-db-ncbihelper-perl, libbio-variation-perl, python3-scanpy, libbio-db-biofetch-perl, libbio-db-embl-perl, python3-wdlparse, pangolearn, libpdb-redo-dev Suggests: r-bioc-structuralvariantannotation -med-covid-19 added: Recommends: uncalled, covpipe, fastani, python3-scanpy, nthash, bamclipper -med-epi added: Suggests: python3-epimodels -med-imaging added: Recommends: python3-nipype, bart-cuda removed: Suggests: python-nipype -med-imaging-dev added: Recommends: python3-nipype, python3-brian, python3-vigra removed: Suggests: python-vigra, python-nipype Checksums-Sha1: e607ff4a650638195b5fe0d697e4bea9364cabca 10488 debian-med_3.7_arm64.buildinfo 3976d24624dd6854ef76a94e0950b24957cecbfd 17568 med-all_3.7_all.deb f463a677e32b58a1a8553bf4d0c908183e076277 21912 med-bio-dev_3.7_all.deb d733c3d71e9e07243ba172243fd7f108901848ec 24724 med-bio_3.7_all.deb d5046102c9e8db2b180729fbe3be7845ae216ebb 20324 med-cloud_3.7_all.deb 87a243530561623688c787a6d72dec2b786abd33 21608 med-config_3.7_all.deb 1bb294efa01acfc5b307948ff6f44ebf2d687dc6 19496 med-data_3.7_all.deb 0dcc6d61721cba1510049b8f51b49e80bfaaed0a 19476 med-dental_3.7_all.deb f63594a4346f8f334fa8dccd1ecea6a0689f4bda 20016 med-epi_3.7_all.deb 0ec2f1658c6492a4eefb0867e12382175c4f60ec 19652 med-his_3.7_all.deb 7d832a8b2ef00753f1c84bac5b290d7fe79a3faa 19896 med-imaging-dev_3.7_all.deb 997e7ea0f325e2a4a36058bc53520fa33067da40 20416 med-imaging_3.7_all.deb 54d8ea3cbd127935f73aa922ae9ff0ef20cfe664 19500 med-laboratory_3.7_all.deb 4519218f0c338b65156e0a12214caf8aad934f62 19468 med-oncology_3.7_all.deb 5ba790fd5921f5ef0a54dc1f804660e7ff1ac35a 19500 med-pharmacy_3.7_all.deb fee40bc4bdeceb184077fd221a214701506dfb3c 19832 med-physics_3.7_all.deb 8879cc153ed2d4dc74295945b2a70710cfba3da0 19648 med-practice_3.7_all.deb 438b52e34ab1965f7ba35baf597903e46cbd3466 19536 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340ef60d0bedaa17402a6ef2eb2ea78669223d43c3f2c3931281309b4cadf8a2 19648 med-practice_3.7_all.deb feae78481634274720fb0d34d57315c6f4f9e34b048980536c9efd8bfaf6b4db 19536 med-psychology_3.7_all.deb 57266f4e71dc9732afc024d9ea9e1a462f605c2ac8dbd0cb7759a71667f42717 19444 med-research_3.7_all.deb 670cfa173d6dc677dab2917b0f0995a879045ebfca449271e2cabeb908863830 19544 med-statistics_3.7_all.deb 790bff4469d5acb4420923b0dc84e935c74d01664a1ef3b92a339713ce1c1d5c 19192 med-tasks_3.7_all.deb f943b99aa6f8ffc387556858c6262411259756e9143d913cc5ce6e755d6e33d5 19604 med-tools_3.7_all.deb c798650f0dcbdfcd2077ce31439e29f7b7743ce9a52dc511d0b810a72f1f07bf 19528 med-typesetting_3.7_all.deb Files: 9bec69d2a7f10453c01ca9fd0db01d42 10488 misc optional debian-med_3.7_arm64.buildinfo 8d09d4c17d2906c5c368193a43ef3e94 17568 metapackages optional med-all_3.7_all.deb 8826a13bf14374b81baef7dc1fb357c6 21912 metapackages optional med-bio-dev_3.7_all.deb a8cabba7b676c58c49e7b9b40ac31d08 24724 metapackages optional med-bio_3.7_all.deb 08d86a416b7fecf8850f7477ea767ef2 20324 metapackages optional med-cloud_3.7_all.deb ecd081e2c50642411b30145a5361f270 21608 misc optional med-config_3.7_all.deb dd5be24c0449b72f25e4726a517f2f77 19496 metapackages optional med-data_3.7_all.deb 96442ebfd021c2dbcf20d7bec54f4379 19476 metapackages optional med-dental_3.7_all.deb 52a547691e5a60204c7bfbed6d523d54 20016 metapackages optional med-epi_3.7_all.deb b73f8c383fc65655a4672b047fc962ff 19652 metapackages optional med-his_3.7_all.deb 666827b448b3ffc605c796d9e6ee2070 19896 metapackages optional med-imaging-dev_3.7_all.deb e80a590d766408a1caaf8ee164a0faec 20416 metapackages optional med-imaging_3.7_all.deb 53ef0a2fa93c0d93993b6047990a1655 19500 metapackages optional med-laboratory_3.7_all.deb 98a1b74b879fcd487c987dc99333448d 19468 metapackages optional med-oncology_3.7_all.deb 0157206dd896426c722cdb27f09fabca 19500 metapackages optional med-pharmacy_3.7_all.deb 3d0364017805a5d9ffb1868730c68025 19832 metapackages optional med-physics_3.7_all.deb 75ca87a90dbf367bb3febb8b55722b65 19648 metapackages optional med-practice_3.7_all.deb dd4a8174e830f8383e2b9c8d7bd79d92 19536 metapackages optional med-psychology_3.7_all.deb 3ff914f718814dffc0474d4b4123ed7d 19444 metapackages optional med-research_3.7_all.deb 6d8ae2febc5b63916d98faa615a572c0 19544 metapackages optional med-statistics_3.7_all.deb 1ca7f1578024df9796bc3bf8055c2f85 19192 misc optional med-tasks_3.7_all.deb 5e16e20d69710cca46261445479a2219 19604 metapackages optional med-tools_3.7_all.deb 2ae0d903ce94ab2ff98e4808ed0c099b 19528 metapackages optional med-typesetting_3.7_all.deb Sat Jul 10 00:25:49 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.6yv4TUbmm9/debian-med_3.7.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.6yv4TUbmm9/debian-med_3.7.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.6yv4TUbmm9/debian-med_3.7.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.6yv4TUbmm9/b1/debian-med_3.7_arm64.changes /srv/reproducible-results/rbuild-debian/tmp.6yv4TUbmm9/b2/debian-med_3.7_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.250s) 0.250s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.037s) 0.037s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Sat Jul 10 00:25:55 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Sat Jul 10 00:25:55 UTC 2021 I: debian-med from bullseye built successfully and reproducibly on arm64. Sat Jul 10 00:25:56 UTC 2021 I: Submitting .buildinfo files to external archives: Sat Jul 10 00:25:56 UTC 2021 I: Submitting 12K b1/debian-med_3.7_arm64.buildinfo.asc Sat Jul 10 00:25:57 UTC 2021 I: Submitting 12K b2/debian-med_3.7_arm64.buildinfo.asc Sat Jul 10 00:25:58 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jul 10 00:25:58 UTC 2021 I: Done submitting .buildinfo files. Sat Jul 10 00:25:58 UTC 2021 I: Removing signed debian-med_3.7_arm64.buildinfo.asc files: removed './b1/debian-med_3.7_arm64.buildinfo.asc' removed './b2/debian-med_3.7_arm64.buildinfo.asc'