Thu Jul 15 19:26:50 UTC 2021 I: starting to build uc-echo/bullseye/arm64 on jenkins on '2021-07-15 19:26' Thu Jul 15 19:26:50 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_30/12619/console.log Thu Jul 15 19:26:50 UTC 2021 I: Downloading source for bullseye/uc-echo=1.12-15 --2021-07-15 19:26:51-- http://cdn-fastly.deb.debian.org/debian/pool/main/u/uc-echo/uc-echo_1.12-15.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2202 (2.2K) Saving to: ‘uc-echo_1.12-15.dsc’ 0K .. 100% 4.05M=0.001s 2021-07-15 19:26:51 (4.05 MB/s) - ‘uc-echo_1.12-15.dsc’ saved [2202/2202] Thu Jul 15 19:26:51 UTC 2021 I: uc-echo_1.12-15.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: uc-echo Binary: uc-echo Architecture: any Version: 1.12-15 Maintainer: Debian Med Packaging Team Uploaders: Thorsten Alteholz , Andreas Tille , Navid Fehrenbacher , Pierre Gruet Homepage: http://uc-echo.sourceforge.net/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/uc-echo Vcs-Git: https://salsa.debian.org/med-team/uc-echo.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper-compat (= 12), dh-python, python3-all-dev:any, python3-scipy:native, python3-numpy:native, g++-multilib [i386 powerpc sparc x32] Package-List: uc-echo deb science optional arch=any Checksums-Sha1: 49dc8f1e05a1ee575d37be694f0f0077b11df13a 461450 uc-echo_1.12.orig.tar.gz 634b1f1bef0996246b6ea4cc5811a5e97f0134e5 8904 uc-echo_1.12-15.debian.tar.xz Checksums-Sha256: b83c8b8acfd285ae1433b0cb3f2a88d968e0f2135cc6d6e466e5718a0fe95255 461450 uc-echo_1.12.orig.tar.gz 007c20a32ac38b32b01d0d0f201028cfe44ac88050f940474168213e3e08df26 8904 uc-echo_1.12-15.debian.tar.xz Files: 50df044b3ca154eee94af83f3fd270c7 461450 uc-echo_1.12.orig.tar.gz 52ec42d994d39d615788c1071079a6a8 8904 uc-echo_1.12-15.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl6Z73ERHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFqnQ/9EopOtC3XVSDie+kYu+Tfch0DEb7Cl3/L Ej9jtwAj5mdXLFCVH4nEg3O5GT/a6DFx4ofvsfswJNeEl8HlpJqmkLi3Ocre6vkN q9xi5S6jbSP6Pq9iEKrFVTzm7Et0AJazLgYMKvyPDW8oYofDhL+xpEl6K41L9uef /BuWa0KKHUH1RPAIdef09vb3xFe2yGFSnZPVXmcU8s8Yz/sCkat1+2eljBn+YSVO Pnu/cqfelBVAbQLvF7sLKsU9mKx+OTk/xUu1c3MZBt4RugKTjWhbQLqcBycBd6VQ JvWjqIDLzRaMrPBQV9XUtCRGHnY+4z9eMdUL9eXc7rNr/w+ePOdp+zm96tLCV/ih cXKm7jgtxXpObSPx62DjXm11nCsXInzr4nqU1kIAbE2fbDFrcoZHdiwS4X1n6ecW 3tnUOYQuxMec8gFuwBELTH0jyGMnZPPDdSB+H3Xu+T3X6d4o/vIzud7yOlOKv1p9 oeIaaw3K+RtXxOkBsDd+kgBoL0sfgn8XEulPjTJYAIW1t3L/07MhTQHCYCuDI/DH Ssofe+sP6hibHXEsn5fnmYV142rSR4aPcHLdPfDtyUgE1KMsbj7SJeQeNd0GIfhj gxniBKwzWSFhHqn6Qztm4lplYno8M6N3MuRHDzBB3LaxHNaQ1zwiKRB/0kjlR5vo LVh+RdiHmYU= =/aoX -----END PGP SIGNATURE----- Thu Jul 15 19:26:51 UTC 2021 I: Checking whether the package is not for us Thu Jul 15 19:26:51 UTC 2021 I: Starting 1st build on remote node codethink16-arm64.debian.net. Thu Jul 15 19:26:51 UTC 2021 I: Preparing to do remote build '1' on codethink16-arm64.debian.net. Thu Jul 15 19:28:08 UTC 2021 I: Deleting $TMPDIR on codethink16-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jul 15 07:26:53 -12 2021 I: pbuilder-time-stamp: 1626377213 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [uc-echo_1.12-15.dsc] I: copying [./uc-echo_1.12.orig.tar.gz] I: copying [./uc-echo_1.12-15.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.AnwpuSmY/trustedkeys.kbx': General error gpgv: Signature made Fri Apr 17 06:03:29 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./uc-echo_1.12-15.dsc dpkg-source: info: extracting uc-echo in uc-echo-1.12 dpkg-source: info: unpacking uc-echo_1.12.orig.tar.gz dpkg-source: info: unpacking uc-echo_1.12-15.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening-flags.patch dpkg-source: info: applying include.patch dpkg-source: info: applying m64-flag.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying using_int_not_char.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/7224/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='7224' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.CFyYhoDwXa/pbuilderrc_dEJ3 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.CFyYhoDwXa/b1 --logfile b1/build.log uc-echo_1.12-15.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink16-arm64 4.15.0-147-generic #151-Ubuntu SMP Fri Jun 18 19:18:37 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Jun 21 14:26 bash -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash -rwxr-xr-x 1 root root 101384 Sep 22 2020 date -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd -rwxr-xr-x 1 root root 89824 Sep 22 2020 df -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir -rwxr-xr-x 1 root root 76152 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 31512 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 64856 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 34824 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 178400 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 93744 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 18440 Nov 6 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln -rwxr-xr-x 1 root root 52720 Feb 7 2020 login -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls -rwxr-xr-x 1 root root 161960 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 51368 Feb 7 02:38 more -rwsr-xr-x 1 root root 51360 Feb 7 02:38 mount -rwxr-xr-x 1 root root 14496 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 13 21:24 sh -> dash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Feb 7 02:38 su -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync -rwxr-xr-x 1 root root 535768 Feb 16 21:55 tar -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch -rwxr-xr-x 1 root root 31512 Sep 22 2020 true -rwxr-xr-x 1 root root 14264 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 30880 Feb 7 02:38 umount -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir -rwxr-xr-x 1 root root 59584 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/7224/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dh-python, python3-all-dev:any, python3-scipy:native, python3-numpy:native dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev:any. pbuilder-satisfydepends-dummy depends on python3-scipy:native. pbuilder-satisfydepends-dummy depends on python3-numpy:native. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu67{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblbfgsb0{a} libmagic-mgc{a} libmagic1{a} libmpdec3{a} libpipeline1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.9{a} libpython3.9-dev{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-all{a} python3-all-dev{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pkg-resources{a} python3-scipy{a} python3.9{a} python3.9-dev{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python3-pil wget 0 packages upgraded, 67 newly installed, 0 to remove and 0 not upgraded. Need to get 47.4 MB of archives. After unpacking 193 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-7 [141 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-minimal arm64 3.9.2-1 [797 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2 [83.1 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 python3.9-minimal arm64 3.9.2-1 [1884 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 python3-minimal arm64 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 libmpdec3 arm64 2.5.1-1 [84.4 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 libreadline8 arm64 8.1-1 [160 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-stdlib arm64 3.9.2-1 [1658 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 python3.9 arm64 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 libpython3-stdlib arm64 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 python3 arm64 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3 [69.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 python3-distutils all 3.9.2-1 [143 kB] Get: 46 http://deb.debian.org/debian bullseye/main arm64 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 libblas3 arm64 3.9.0-3 [101 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 libexpat1-dev arm64 2.2.10-2 [126 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 libgfortran5 arm64 10.2.1-6 [333 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 liblapack3 arm64 3.9.0-3 [1541 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 liblbfgsb0 arm64 3.0+dfsg.3-9 [24.5 kB] Get: 55 http://deb.debian.org/debian bullseye/main arm64 libpython3.9 arm64 3.9.2-1 [1556 kB] Get: 56 http://deb.debian.org/debian bullseye/main arm64 libpython3.9-dev arm64 3.9.2-1 [3835 kB] Get: 57 http://deb.debian.org/debian bullseye/main arm64 libpython3-dev arm64 3.9.2-3 [21.7 kB] Get: 58 http://deb.debian.org/debian bullseye/main arm64 libpython3-all-dev arm64 3.9.2-3 [1068 B] Get: 59 http://deb.debian.org/debian bullseye/main arm64 python3-all arm64 3.9.2-3 [1056 B] Get: 60 http://deb.debian.org/debian bullseye/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2 [189 kB] Get: 61 http://deb.debian.org/debian bullseye/main arm64 python3.9-dev arm64 3.9.2-1 [515 kB] Get: 62 http://deb.debian.org/debian bullseye/main arm64 python3-dev arm64 3.9.2-3 [24.8 kB] Get: 63 http://deb.debian.org/debian bullseye/main arm64 python3-all-dev arm64 3.9.2-3 [1064 B] Get: 64 http://deb.debian.org/debian bullseye/main arm64 python3-decorator all 4.4.2-2 [15.8 kB] Get: 65 http://deb.debian.org/debian bullseye/main arm64 python3-pkg-resources all 52.0.0-4 [190 kB] Get: 66 http://deb.debian.org/debian bullseye/main arm64 python3-numpy arm64 1:1.19.5-1 [3196 kB] Get: 67 http://deb.debian.org/debian bullseye/main arm64 python3-scipy arm64 1.6.0-2 [11.6 MB] Fetched 47.4 MB in 1s (57.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. 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Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libmpdec3:arm64 (2.5.1-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up libelf1:arm64 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7) ... Setting up libjs-underscore (1.9.1~dfsg-3) ... Setting up libfile-stripnondeterminism-perl (1.11.0-1) ... Setting up liblapack3:arm64 (3.9.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libreadline8:arm64 (8.1-1) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.11.0-1) ... 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Setting up libpython3-dev:arm64 (3.9.2-3) ... Setting up python3-all (3.9.2-3) ... Setting up libpython3-all-dev:arm64 (3.9.2-3) ... Setting up python3-dev (3.9.2-3) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up python3-all-dev (3.9.2-3) ... Setting up python3-scipy (1.6.0-2) ... Processing triggers for libc-bin (2.31-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/uc-echo-1.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../uc-echo_1.12-15_source.changes dpkg-buildpackage: info: source package uc-echo dpkg-buildpackage: info: source version 1.12-15 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with python3 dh_auto_clean make -j8 clean make[1]: Entering directory '/build/uc-echo-1.12' rm -f DNASeq.o NeighborSet.o KmerHashMap.o hashing NeighborJoin NeighborJoinParam NeighborMerge Voting HashMerge make[1]: Leaving directory '/build/uc-echo-1.12' dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/uc-echo-1.12' echo "I: DEB_HOST_ARCH: arm64" I: DEB_HOST_ARCH: arm64 echo "I: ADDCXXFLAGS: " I: ADDCXXFLAGS: echo "I: CXXFLAGS: -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security " I: CXXFLAGS: -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security dh_auto_build make -j8 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/uc-echo-1.12' g++ -c -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -Wdate-time -D_FORTIFY_SOURCE=2 DNASeq.cpp -o DNASeq.o g++ -c -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -Wdate-time -D_FORTIFY_SOURCE=2 NeighborSet.cpp -o NeighborSet.o g++ -c -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -Wdate-time -D_FORTIFY_SOURCE=2 KmerHashMap.cpp -o KmerHashMap.o g++ -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o hashing hashing.cpp DNASeq.o NeighborSet.o KmerHashMap.o g++ -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o NeighborJoin NeighborJoin.cpp DNASeq.o NeighborSet.o KmerHashMap.o g++ -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o NeighborJoinParam NeighborJoinParam.cpp DNASeq.o NeighborSet.o KmerHashMap.o g++ -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o NeighborMerge NeighborMerge.cpp DNASeq.o NeighborSet.o KmerHashMap.o g++ -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o Voting Voting.cpp DNASeq.o NeighborSet.o KmerHashMap.o g++ -g -O2 -fdebug-prefix-map=/build/uc-echo-1.12=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o HashMerge HashMerge.cpp DNASeq.o NeighborSet.o KmerHashMap.o In file included from NeighborMerge.cpp:16: NeighborSet.hpp: In member function 'void NeighborSetLoader::load(unsigned int, unsigned int)': NeighborSet.hpp:163:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 163 | fread(&numNeighbors, sizeof(unsigned int), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from NeighborMerge.cpp:16: NeighborSet.hpp:169:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 169 | fread(&neighborId, sizeof(unsigned int), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NeighborSet.hpp:171:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 171 | fread(&offset, sizeof(NeighborInfo::index_t), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NeighborSet.hpp:173:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 173 | fread(&nerr, sizeof(NeighborInfo::index_t), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from Voting.cpp:19: NeighborSet.hpp: In member function 'void NeighborSetLoader::load(unsigned int, unsigned int)': NeighborSet.hpp:163:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 163 | fread(&numNeighbors, sizeof(unsigned int), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from Voting.cpp:19: NeighborSet.hpp:169:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 169 | fread(&neighborId, sizeof(unsigned int), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NeighborSet.hpp:171:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 171 | fread(&offset, sizeof(NeighborInfo::index_t), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NeighborSet.hpp:173:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 173 | fread(&nerr, sizeof(NeighborInfo::index_t), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/build/uc-echo-1.12' make[1]: Leaving directory '/build/uc-echo-1.12' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/uc-echo-1.12' dh_auto_install dh_installchangelogs README make[1]: Leaving directory '/build/uc-echo-1.12' dh_install dh_installdocs dh_installchangelogs dh_installman dh_python3 dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/uc-echo-1.12' dh_fixperms chmod +x debian/*/usr/lib/*/*.py make[1]: Leaving directory '/build/uc-echo-1.12' dh_missing dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'uc-echo-dbgsym' in '../uc-echo-dbgsym_1.12-15_arm64.deb'. dpkg-deb: building package 'uc-echo' in '../uc-echo_1.12-15_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../uc-echo_1.12-15_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/7224 and its subdirectories I: Current time: Thu Jul 15 07:28:07 -12 2021 I: pbuilder-time-stamp: 1626377287 Thu Jul 15 19:28:09 UTC 2021 I: 1st build successful. Starting 2nd build on remote node codethink11-arm64.debian.net. Thu Jul 15 19:28:09 UTC 2021 I: Preparing to do remote build '2' on codethink11-arm64.debian.net. Thu Jul 15 19:29:29 UTC 2021 I: Deleting $TMPDIR on codethink11-arm64.debian.net. Thu Jul 15 19:29:29 UTC 2021 I: uc-echo_1.12-15_arm64.changes: Format: 1.8 Date: Fri, 17 Apr 2020 11:51:35 +0200 Source: uc-echo Binary: uc-echo uc-echo-dbgsym Architecture: arm64 Version: 1.12-15 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Pierre Gruet Description: uc-echo - error correction algorithm designed for short-reads from NGS Closes: 953898 Changes: uc-echo (1.12-15) unstable; urgency=medium . * Using int and not char for storing offsets Closes: #953898 Checksums-Sha1: 52b4cf8c145e3ca4cc251f8d1462517001bd9187 917168 uc-echo-dbgsym_1.12-15_arm64.deb cfb5a3d66d9c685ac9aff095eb96cf636d1b032c 5983 uc-echo_1.12-15_arm64.buildinfo d4ed98246e6feaea3175586e43e34a0ee542a158 68440 uc-echo_1.12-15_arm64.deb Checksums-Sha256: 71f36bd6b3fc3906c021006ac1a6c7f49178c9c7f00c0112449655776304e9ec 917168 uc-echo-dbgsym_1.12-15_arm64.deb 09c0c3a38b9af93d11ab6c12868d10a488a231833f974f3816286ce9fdd89582 5983 uc-echo_1.12-15_arm64.buildinfo 9f5e8621093d214b1fc14699a57fa4cd56352e0ab6f68956fbe4863118546e9d 68440 uc-echo_1.12-15_arm64.deb Files: 2c6993ad418f03a1e1eb991e2a68f9af 917168 debug optional uc-echo-dbgsym_1.12-15_arm64.deb b02b9a09243986c7d3446c42bcc6dee6 5983 science optional uc-echo_1.12-15_arm64.buildinfo ad9555d59ae977e5841431c45e0a86f3 68440 science optional uc-echo_1.12-15_arm64.deb Thu Jul 15 19:29:30 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.CFyYhoDwXa/uc-echo_1.12-15.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.CFyYhoDwXa/uc-echo_1.12-15.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.CFyYhoDwXa/uc-echo_1.12-15.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.CFyYhoDwXa/b1/uc-echo_1.12-15_arm64.changes /srv/reproducible-results/rbuild-debian/tmp.CFyYhoDwXa/b2/uc-echo_1.12-15_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.239s) 0.239s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.026s) 0.026s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Thu Jul 15 19:29:32 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Thu Jul 15 19:29:32 UTC 2021 I: uc-echo from bullseye built successfully and reproducibly on arm64. Thu Jul 15 19:29:33 UTC 2021 I: Submitting .buildinfo files to external archives: Thu Jul 15 19:29:33 UTC 2021 I: Submitting 8.0K b1/uc-echo_1.12-15_arm64.buildinfo.asc Thu Jul 15 19:29:35 UTC 2021 I: Submitting 8.0K b2/uc-echo_1.12-15_arm64.buildinfo.asc Thu Jul 15 19:29:36 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Jul 15 19:29:36 UTC 2021 I: Done submitting .buildinfo files. Thu Jul 15 19:29:36 UTC 2021 I: Removing signed uc-echo_1.12-15_arm64.buildinfo.asc files: removed './b1/uc-echo_1.12-15_arm64.buildinfo.asc' removed './b2/uc-echo_1.12-15_arm64.buildinfo.asc'