Mon Jul 12 20:25:14 UTC 2021 I: starting to build simka/bullseye/i386 on jenkins on '2021-07-12 20:25' Mon Jul 12 20:25:14 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_13/16317/console.log Mon Jul 12 20:25:14 UTC 2021 I: Downloading source for bullseye/simka=1.5.3-4 --2021-07-12 20:25:14-- http://cdn-fastly.deb.debian.org/debian/pool/main/s/simka/simka_1.5.3-4.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2207 (2.2K) Saving to: ‘simka_1.5.3-4.dsc’ 0K .. 100% 192M=0s 2021-07-12 20:25:14 (192 MB/s) - ‘simka_1.5.3-4.dsc’ saved [2207/2207] Mon Jul 12 20:25:14 UTC 2021 I: simka_1.5.3-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: simka Binary: simka, simkamin Architecture: amd64 arm64 i386 ppc64el s390x hppa ia64 ppc64 riscv64 sparc64 all Version: 1.5.3-4 Maintainer: Debian Med Packaging Team Uploaders: Shayan Doust Homepage: https://github.com/GATB/simka Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/simka Vcs-Git: https://salsa.debian.org/med-team/simka.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, libgatbcore-dev, zlib1g-dev, libhdf5-dev, libboost-dev, python3-all, dh-python, chrpath Package-List: simka deb science optional arch=amd64,arm64,i386,ppc64el,s390x,hppa,ia64,ppc64,riscv64,sparc64 simkamin deb science optional arch=all Checksums-Sha1: 2b4e7951051e7669b65d5f81af15fc9cbb2dea4e 168163 simka_1.5.3.orig.tar.gz 984ab9fc57981a62ef2807650babc6ee7acd37d1 21784 simka_1.5.3-4.debian.tar.xz Checksums-Sha256: 545182a28430a8149efd709d9be323683c07ab289c5d0e345b67819f845d0628 168163 simka_1.5.3.orig.tar.gz 63a13fef4fa13657f2090a546e7c46f3c74d8a87e99710d7d76a02ea16a9a14c 21784 simka_1.5.3-4.debian.tar.xz Files: 29e4c0b033b034e7bab2ad96cabde230 168163 simka_1.5.3.orig.tar.gz 902ced246eaa8154299907f5406c8f6b 21784 simka_1.5.3-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJPBAEBCgA5FiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmBuJLQbHGV0aWVubmUu bW9sbGllckBtYWlsb28ub3JnAAoJEHk89n6PDRHa7ZYQALUlXYDkwpqPUvfW7h5O v0vXJx2tHr87Ey7WXQt8OK+cz+ID8l7456vw0gPMAwEEuKGJREM1nzsSW7+g8twd 4XpUVy0f2FZrFQvo6ZGi7f3jZYiYcuXFqVif2JAlgPUWs4uocXksd1ApCdKq92e+ hq/FGUyL9PWGT059NlDEpaADBWi2AMTlZKDA60dJzpW5MU7OqK8/hAwhoB1uekCt 5YK4Yv6rlWCu5bxrUQIOsQ4JIUk4JAZK/8bvmCW+RalirWc9TDaDDt+3OQVg/edL 8hIzX2SeXnAa0qsjW1G6kE4/I4W+dQ3NkGoEWV0/2j7X6PTbkstriG3A/OaktUJ4 MRd236Tnj6Ev9sEqzsB73EQeaBowrxWlv3u1rxBlupyCXWq0zlVY+oOCIuaotec+ hkh5yKxgWWNur9DUJ3L+mBLdpxdKUQ9htQ+qqddVgpcA51LRmdcKmRnSQqouEMCG xq77xXxJyNHeyjHAgL2Zi/JcTHnto3lMeUgpd/1APpBfCrLPqIyDtV0WkjFe79ww 3ogEE05Yx3SqJbIlsmwqPUY0M0r6VA9vWkgGmEcDU4aXcPPdJ+6QKkol3epNryXX okm573U62vb2QCPzTAYJ4RvETOi9J4bo07w2wnzUwVqz6oYaOmtk7VJCYxIiYFfm 5EcLwyzg/0/IAmoGV49V8yet =F1YD -----END PGP SIGNATURE----- Mon Jul 12 20:25:14 UTC 2021 I: Checking whether the package is not for us Mon Jul 12 20:25:14 UTC 2021 I: Starting 1st build on remote node ionos12-i386.debian.net. Mon Jul 12 20:25:14 UTC 2021 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Mon Jul 12 20:35:40 UTC 2021 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Jul 12 08:25:20 -12 2021 I: pbuilder-time-stamp: 1626121520 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [simka_1.5.3-4.dsc] I: copying [./simka_1.5.3.orig.tar.gz] I: copying [./simka_1.5.3-4.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.PQw3_t69/trustedkeys.kbx': General error gpgv: Signature made Wed Apr 7 09:31:32 2021 -12 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "etienne.mollier@mailoo.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./simka_1.5.3-4.dsc dpkg-source: info: extracting simka in simka-1.5.3 dpkg-source: info: unpacking simka_1.5.3.orig.tar.gz dpkg-source: info: unpacking simka_1.5.3-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_temp_arrays.patch dpkg-source: info: applying detailed_errors.patch dpkg-source: info: applying fix_binary_path.patch dpkg-source: info: applying fix_test_path.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying use_debian_packaged_libraries.patch dpkg-source: info: applying high_cores_count.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/26300/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=10' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='34ce51ca0fbf4ee18bb1ec71256e38bd' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='26300' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.jMn03Rg3AO/pbuilderrc_P7X6 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.jMn03Rg3AO/b1 --logfile b1/build.log simka_1.5.3-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos12-i386 4.19.0-17-686-pae #1 SMP Debian 4.19.194-2 (2021-06-21) i686 GNU/Linux I: ls -l /bin total 5784 -rwxr-xr-x 1 root root 1367848 Jun 21 14:25 bash -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash -rwxr-xr-x 1 root root 124904 Sep 22 2020 date -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd -rwxr-xr-x 1 root root 100752 Sep 22 2020 df -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir -rwxr-xr-x 1 root root 83644 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 34664 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 71928 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 30112 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 210488 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 100952 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln -rwxr-xr-x 1 root root 55572 Feb 7 2020 login -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls -rwxr-xr-x 1 root root 153124 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 58920 Feb 7 02:38 more -rwsr-xr-x 1 root root 50720 Feb 7 02:38 mount -rwxr-xr-x 1 root root 13856 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:25 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 11 21:28 sh -> dash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Feb 7 02:38 su -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync -rwxr-xr-x 1 root root 602584 Feb 16 21:55 tar -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch -rwxr-xr-x 1 root root 34664 Sep 22 2020 true -rwxr-xr-x 1 root root 17768 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 30236 Feb 7 02:38 umount -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir -rwxr-xr-x 1 root root 63024 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/26300/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libgatbcore-dev, zlib1g-dev, libhdf5-dev, libboost-dev, python3-all, dh-python, chrpath dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libgatbcore-dev; however: Package libgatbcore-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} chrpath{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libarchive13{a} libboost-dev{a} libboost1.74-dev{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgatbcore-dev{a} libgatbcore3{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu67{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp24{a} libldap-2.4-2{a} libmagic-mgc{a} libmagic1{a} libmpdec3{a} libncurses6{a} libnghttp2-14{a} libpipeline1{a} libprocps8{a} libpsl5{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} procps{a} python3{a} python3-all{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 86 newly installed, 0 to remove and 0 not upgraded. Need to get 57.1 MB of archives. After unpacking 370 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-7 [148 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 libpython3.9-minimal i386 3.9.2-1 [801 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libexpat1 i386 2.2.10-2 [98.8 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 python3.9-minimal i386 3.9.2-1 [1956 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 python3-minimal i386 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 libmpdec3 i386 2.5.1-1 [91.9 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 libreadline8 i386 8.1-1 [173 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 libpython3.9-stdlib i386 3.9.2-1 [1703 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 python3.9 i386 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 libpython3-stdlib i386 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 python3 i386 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 libncurses6 i386 6.2+20201114-2 [110 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 libprocps8 i386 2:3.3.17-5 [64.2 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 procps i386 2:3.3.17-5 [501 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 32 http://deb.debian.org/debian bullseye/main i386 chrpath i386 0.16-2+b1 [17.5 kB] Get: 33 http://deb.debian.org/debian bullseye/main i386 cmake-data all 3.18.4-2 [1725 kB] Get: 34 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-7 [8775 kB] Get: 35 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7 [728 kB] Get: 36 http://deb.debian.org/debian bullseye/main i386 libarchive13 i386 3.4.3-2+b1 [384 kB] Get: 37 http://deb.debian.org/debian bullseye/main i386 libbrotli1 i386 1.0.9-2+b2 [286 kB] Get: 38 http://deb.debian.org/debian bullseye/main i386 libsasl2-modules-db i386 2.1.27+dfsg-2.1 [70.0 kB] Get: 39 http://deb.debian.org/debian bullseye/main i386 libsasl2-2 i386 2.1.27+dfsg-2.1 [110 kB] Get: 40 http://deb.debian.org/debian bullseye/main i386 libldap-2.4-2 i386 2.4.57+dfsg-3 [244 kB] Get: 41 http://deb.debian.org/debian bullseye/main i386 libnghttp2-14 i386 1.43.0-1 [85.7 kB] Get: 42 http://deb.debian.org/debian bullseye/main i386 libpsl5 i386 0.21.0-1.2 [57.9 kB] Get: 43 http://deb.debian.org/debian bullseye/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 44 http://deb.debian.org/debian bullseye/main i386 libssh2-1 i386 1.9.0-2 [164 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 libcurl4 i386 7.74.0-1.3+b1 [372 kB] Get: 46 http://deb.debian.org/debian bullseye/main i386 libjsoncpp24 i386 1.9.4-4 [86.1 kB] Get: 47 http://deb.debian.org/debian bullseye/main i386 librhash0 i386 1.4.1-2 [144 kB] Get: 48 http://deb.debian.org/debian bullseye/main i386 libuv1 i386 1.40.0-2 [139 kB] Get: 49 http://deb.debian.org/debian bullseye/main i386 cmake i386 3.18.4-2 [7029 kB] Get: 50 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 51 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 52 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 53 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 54 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 55 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 56 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 57 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 58 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 59 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 60 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 61 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 62 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 63 http://deb.debian.org/debian bullseye/main i386 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 64 http://deb.debian.org/debian bullseye/main i386 python3-distutils all 3.9.2-1 [143 kB] Get: 65 http://deb.debian.org/debian bullseye/main i386 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 66 http://deb.debian.org/debian bullseye/main i386 hdf5-helpers i386 1.10.6+repack-4 [40.4 kB] Get: 67 http://deb.debian.org/debian bullseye/main i386 libaec0 i386 1.0.4-1 [22.6 kB] Get: 68 http://deb.debian.org/debian bullseye/main i386 libsz2 i386 1.0.4-1 [6820 B] Get: 69 http://deb.debian.org/debian bullseye/main i386 libaec-dev i386 1.0.4-1 [21.5 kB] Get: 70 http://deb.debian.org/debian bullseye/main i386 libboost1.74-dev i386 1.74.0-9 [9534 kB] Get: 71 http://deb.debian.org/debian bullseye/main i386 libboost-dev i386 1.74.0.3 [4548 B] Get: 72 http://deb.debian.org/debian bullseye/main i386 libgatbcore3 i386 1.4.2+dfsg-6 [1871 kB] Get: 73 http://deb.debian.org/debian bullseye/main i386 libgatbcore-dev i386 1.4.2+dfsg-6 [4027 kB] Get: 74 http://deb.debian.org/debian bullseye/main i386 libgfortran5 i386 10.2.1-6 [643 kB] Get: 75 http://deb.debian.org/debian bullseye/main i386 libhdf5-103-1 i386 1.10.6+repack-4 [1156 kB] Get: 76 http://deb.debian.org/debian bullseye/main i386 libhdf5-cpp-103-1 i386 1.10.6+repack-4 [148 kB] Get: 77 http://deb.debian.org/debian bullseye/main i386 libhdf5-fortran-102 i386 1.10.6+repack-4 [114 kB] Get: 78 http://deb.debian.org/debian bullseye/main i386 libhdf5-hl-100 i386 1.10.6+repack-4 [93.2 kB] Get: 79 http://deb.debian.org/debian bullseye/main i386 libhdf5-hl-fortran-100 i386 1.10.6+repack-4 [58.3 kB] Get: 80 http://deb.debian.org/debian bullseye/main i386 libhdf5-hl-cpp-100 i386 1.10.6+repack-4 [38.1 kB] Get: 81 http://deb.debian.org/debian bullseye/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2 [194 kB] Get: 82 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo i386 1:2.0.6-4 [160 kB] Get: 83 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo-dev i386 1:2.0.6-4 [299 kB] Get: 84 http://deb.debian.org/debian bullseye/main i386 libjpeg-dev i386 1:2.0.6-4 [67.8 kB] Get: 85 http://deb.debian.org/debian bullseye/main i386 libhdf5-dev i386 1.10.6+repack-4 [2586 kB] Get: 86 http://deb.debian.org/debian bullseye/main i386 python3-all i386 3.9.2-3 [1060 B] Fetched 57.1 MB in 10s (6011 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-7_i386.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../1-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_i386.deb ... 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Unpacking dh-strip-nondeterminism (1.11.0-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../40-libelf1_0.183-1_i386.deb ... Unpacking libelf1:i386 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../41-dwz_0.13+20210201-1_i386.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package gettext. Preparing to unpack .../42-gettext_0.21-4_i386.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../43-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../44-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../45-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... 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Preparing to unpack .../52-libaec-dev_1.0.4-1_i386.deb ... Unpacking libaec-dev:i386 (1.0.4-1) ... Selecting previously unselected package libboost1.74-dev:i386. Preparing to unpack .../53-libboost1.74-dev_1.74.0-9_i386.deb ... Unpacking libboost1.74-dev:i386 (1.74.0-9) ... Selecting previously unselected package libboost-dev:i386. Preparing to unpack .../54-libboost-dev_1.74.0.3_i386.deb ... Unpacking libboost-dev:i386 (1.74.0.3) ... Selecting previously unselected package libgatbcore3:i386. Preparing to unpack .../55-libgatbcore3_1.4.2+dfsg-6_i386.deb ... Unpacking libgatbcore3:i386 (1.4.2+dfsg-6) ... Selecting previously unselected package libgatbcore-dev:i386. Preparing to unpack .../56-libgatbcore-dev_1.4.2+dfsg-6_i386.deb ... Unpacking libgatbcore-dev:i386 (1.4.2+dfsg-6) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../57-libgfortran5_10.2.1-6_i386.deb ... Unpacking libgfortran5:i386 (10.2.1-6) ... Selecting previously unselected package libhdf5-103-1:i386. Preparing to unpack .../58-libhdf5-103-1_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-103-1:i386 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-cpp-103-1:i386. Preparing to unpack .../59-libhdf5-cpp-103-1_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-cpp-103-1:i386 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-fortran-102:i386. Preparing to unpack .../60-libhdf5-fortran-102_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-fortran-102:i386 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-hl-100:i386. Preparing to unpack .../61-libhdf5-hl-100_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-hl-100:i386 (1.10.6+repack-4) ... Selecting previously unselected package libhdf5-hl-fortran-100:i386. Preparing to unpack .../62-libhdf5-hl-fortran-100_1.10.6+repack-4_i386.deb ... Unpacking libhdf5-hl-fortran-100:i386 (1.10.6+repack-4) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/simka-1.5.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package simka dpkg-buildpackage: info: source version 1.5.3-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3 dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-i686-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu .. -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /build/simka-1.5.3/obj-i686-linux-gnu dh_auto_build cd obj-i686-linux-gnu && make -j10 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/simka-1.5.3/obj-i686-linux-gnu' /usr/bin/cmake -S/build/simka-1.5.3 -B/build/simka-1.5.3/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/simka-1.5.3/obj-i686-linux-gnu/CMakeFiles /build/simka-1.5.3/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/simka-1.5.3/obj-i686-linux-gnu' make -f CMakeFiles/simkaMinCore.dir/build.make CMakeFiles/simkaMinCore.dir/depend make -f CMakeFiles/simkaMerge.dir/build.make CMakeFiles/simkaMerge.dir/depend make -f CMakeFiles/simkaCount.dir/build.make CMakeFiles/simkaCount.dir/depend make -f CMakeFiles/simkaCountProcess.dir/build.make CMakeFiles/simkaCountProcess.dir/depend make -f CMakeFiles/simka.dir/build.make CMakeFiles/simka.dir/depend make[3]: Entering directory '/build/simka-1.5.3/obj-i686-linux-gnu' cd /build/simka-1.5.3/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/simka-1.5.3 /build/simka-1.5.3 /build/simka-1.5.3/obj-i686-linux-gnu /build/simka-1.5.3/obj-i686-linux-gnu /build/simka-1.5.3/obj-i686-linux-gnu/CMakeFiles/simkaMinCore.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/simka-1.5.3/obj-i686-linux-gnu' cd /build/simka-1.5.3/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/simka-1.5.3 /build/simka-1.5.3 /build/simka-1.5.3/obj-i686-linux-gnu /build/simka-1.5.3/obj-i686-linux-gnu /build/simka-1.5.3/obj-i686-linux-gnu/CMakeFiles/simkaMerge.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/simka-1.5.3/obj-i686-linux-gnu' cd /build/simka-1.5.3/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/simka-1.5.3 /build/simka-1.5.3 /build/simka-1.5.3/obj-i686-linux-gnu /build/simka-1.5.3/obj-i686-linux-gnu /build/simka-1.5.3/obj-i686-linux-gnu/CMakeFiles/simkaCount.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/simka-1.5.3/obj-i686-linux-gnu' make[3]: Entering directory '/build/simka-1.5.3/obj-i686-linux-gnu' cd /build/simka-1.5.3/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/simka-1.5.3 /build/simka-1.5.3 /build/simka-1.5.3/obj-i686-linux-gnu /build/simka-1.5.3/obj-i686-linux-gnu /build/simka-1.5.3/obj-i686-linux-gnu/CMakeFiles/simka.dir/DependInfo.cmake --color= cd /build/simka-1.5.3/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/simka-1.5.3 /build/simka-1.5.3 /build/simka-1.5.3/obj-i686-linux-gnu /build/simka-1.5.3/obj-i686-linux-gnu /build/simka-1.5.3/obj-i686-linux-gnu/CMakeFiles/simkaCountProcess.dir/DependInfo.cmake --color= Dependee "/build/simka-1.5.3/obj-i686-linux-gnu/CMakeFiles/simkaMinCore.dir/DependInfo.cmake" is newer than depender "/build/simka-1.5.3/obj-i686-linux-gnu/CMakeFiles/simkaMinCore.dir/depend.internal". 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--verbose=1 /usr/bin/c++ -Wno-error -O2 -g -Wunused-result -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/simka.dir/src/SimkaPotara.cpp.o CMakeFiles/simka.dir/src/core/template/SimkaAlgorithmTemplate_128.cpp.o CMakeFiles/simka.dir/src/core/template/SimkaAlgorithmTemplate_160.cpp.o CMakeFiles/simka.dir/src/core/template/SimkaAlgorithmTemplate_192.cpp.o CMakeFiles/simka.dir/src/core/template/SimkaAlgorithmTemplate_224.cpp.o CMakeFiles/simka.dir/src/core/template/SimkaAlgorithmTemplate_256.cpp.o CMakeFiles/simka.dir/src/core/template/SimkaAlgorithmTemplate_32.cpp.o CMakeFiles/simka.dir/src/core/template/SimkaAlgorithmTemplate_64.cpp.o CMakeFiles/simka.dir/src/core/template/SimkaAlgorithmTemplate_96.cpp.o CMakeFiles/simka.dir/src/core/Simka.cpp.o CMakeFiles/simka.dir/src/core/SimkaAlgorithm.cpp.o CMakeFiles/simka.dir/src/core/SimkaDistance.cpp.o -o bin/simka -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial -lgatbcore -lhdf5 -lz [ 98%] Linking CXX executable bin/simkaCountProcess /usr/bin/cmake -E cmake_link_script CMakeFiles/simkaCountProcess.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-error -O2 -g -Wunused-result -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/simkaCountProcess.dir/src/minikc/SimkaCountProcess.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/template/SimkaAlgorithmTemplate_128.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/template/SimkaAlgorithmTemplate_160.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/template/SimkaAlgorithmTemplate_192.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/template/SimkaAlgorithmTemplate_224.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/template/SimkaAlgorithmTemplate_256.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/template/SimkaAlgorithmTemplate_32.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/template/SimkaAlgorithmTemplate_64.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/template/SimkaAlgorithmTemplate_96.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/Simka.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/SimkaAlgorithm.cpp.o CMakeFiles/simkaCountProcess.dir/src/core/SimkaDistance.cpp.o -o bin/simkaCountProcess -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial -lgatbcore -lhdf5 -lz [100%] Linking CXX executable bin/simkaCount /usr/bin/cmake -E cmake_link_script CMakeFiles/simkaCount.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-error -O2 -g -Wunused-result -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/simkaCount.dir/src/SimkaCount.cpp.o CMakeFiles/simkaCount.dir/src/core/template/SimkaAlgorithmTemplate_128.cpp.o CMakeFiles/simkaCount.dir/src/core/template/SimkaAlgorithmTemplate_160.cpp.o CMakeFiles/simkaCount.dir/src/core/template/SimkaAlgorithmTemplate_192.cpp.o CMakeFiles/simkaCount.dir/src/core/template/SimkaAlgorithmTemplate_224.cpp.o CMakeFiles/simkaCount.dir/src/core/template/SimkaAlgorithmTemplate_256.cpp.o CMakeFiles/simkaCount.dir/src/core/template/SimkaAlgorithmTemplate_32.cpp.o CMakeFiles/simkaCount.dir/src/core/template/SimkaAlgorithmTemplate_64.cpp.o CMakeFiles/simkaCount.dir/src/core/template/SimkaAlgorithmTemplate_96.cpp.o CMakeFiles/simkaCount.dir/src/core/Simka.cpp.o CMakeFiles/simkaCount.dir/src/core/SimkaAlgorithm.cpp.o CMakeFiles/simkaCount.dir/src/core/SimkaDistance.cpp.o -o bin/simkaCount -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/serial -lgatbcore -lhdf5 -lz make[3]: Leaving directory '/build/simka-1.5.3/obj-i686-linux-gnu' make[3]: Leaving directory '/build/simka-1.5.3/obj-i686-linux-gnu' [100%] Built target simkaCountProcess [100%] Built target simka make[3]: Leaving directory '/build/simka-1.5.3/obj-i686-linux-gnu' [100%] Built target simkaCount make[2]: Leaving directory '/build/simka-1.5.3/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/simka-1.5.3/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/simka-1.5.3/obj-i686-linux-gnu' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-i686-linux-gnu && make -j10 install DESTDIR=/build/simka-1.5.3/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/simka-1.5.3/obj-i686-linux-gnu' /usr/bin/cmake -S/build/simka-1.5.3 -B/build/simka-1.5.3/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/simka-1.5.3/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/simka-1.5.3/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/simka-1.5.3/debian/tmp/usr/./bin -- Installing: /build/simka-1.5.3/debian/tmp/usr/./bin/simkaCount -- Installing: /build/simka-1.5.3/debian/tmp/usr/./bin/simkaCountProcess -- Installing: /build/simka-1.5.3/debian/tmp/usr/./bin/simkaMerge -- Installing: /build/simka-1.5.3/debian/tmp/usr/./bin/simkaMinCore -- Installing: /build/simka-1.5.3/debian/tmp/usr/./bin/simka -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/D_paired_1.fasta -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/simple_test.sh -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/simka_input.txt -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/B.fasta -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/dataset_metadata.csv -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/D_paired_2.fasta -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/C.fasta -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/potara_job -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/potara_job/sge -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/potara_job/sge/job_count.bash -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/potara_job/sge/job_merge.bash -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/potara_job/tgcc -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/potara_job/tgcc/job_count.bash -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/potara_job/tgcc/job_merge.bash -- Installing: /build/simka-1.5.3/debian/tmp/usr/./example/A.fasta -- Installing: /build/simka-1.5.3/debian/tmp/usr/./simkaMin -- Installing: /build/simka-1.5.3/debian/tmp/usr/./simkaMin/simkaMin_update.py -- Installing: /build/simka-1.5.3/debian/tmp/usr/./simkaMin/README.md -- Installing: /build/simka-1.5.3/debian/tmp/usr/./simkaMin/simkaMin_utils.py -- Installing: /build/simka-1.5.3/debian/tmp/usr/./simkaMin/simkaMin.py -- Installing: /build/simka-1.5.3/debian/tmp/usr/./scripts -- Installing: /build/simka-1.5.3/debian/tmp/usr/./scripts/sonarqube_diags -- Installing: /build/simka-1.5.3/debian/tmp/usr/./scripts/visualization -- Installing: /build/simka-1.5.3/debian/tmp/usr/./scripts/visualization/heatmap.r -- Installing: /build/simka-1.5.3/debian/tmp/usr/./scripts/visualization/pca.r -- Installing: /build/simka-1.5.3/debian/tmp/usr/./scripts/visualization/run-visualization.py -- Installing: /build/simka-1.5.3/debian/tmp/usr/./scripts/visualization/dendro.r -- Installing: /build/simka-1.5.3/debian/tmp/usr/./README.md -- Installing: /build/simka-1.5.3/debian/tmp/usr/./LICENSE make[1]: Leaving directory '/build/simka-1.5.3/obj-i686-linux-gnu' debian/rules override_dh_install-arch make[1]: Entering directory '/build/simka-1.5.3' dh_install -a chrpath --delete debian/simka/usr/bin/* rm -rf debian/tmp/usr/example \ debian/tmp/usr/scripts make[1]: Leaving directory '/build/simka-1.5.3' debian/rules override_dh_install-indep make[1]: Entering directory '/build/simka-1.5.3' dh_install -i ls -l debian/simkamin/usr/share && ls -l debian/simkamin/usr/share/simkamin total 12 drwxr-xr-x 3 pbuilder1 pbuilder1 4096 Jul 12 08:34 doc drwxr-xr-x 3 pbuilder1 pbuilder1 4096 Jul 12 08:34 man drwxr-xr-x 2 pbuilder1 pbuilder1 4096 Jul 12 08:34 simkamin total 32 -rw-r--r-- 1 pbuilder1 pbuilder1 8898 Jul 12 08:28 simkaMin.py -rw-r--r-- 1 pbuilder1 pbuilder1 9961 Jul 12 08:28 simkaMin_update.py -rw-r--r-- 1 pbuilder1 pbuilder1 5354 Dec 30 2020 simkaMin_utils.py rm -rf debian/tmp/usr/example \ debian/tmp/usr/scripts set -e; for file in debian/simkamin/usr/share/simkamin/*.py; do mv "$file" "${file%%.py}"; done mv debian/simkamin/usr/share/simkamin/simkaMin_utils debian/simkamin/usr/share/simkamin/simkaMin_utils.py make[1]: Leaving directory '/build/simka-1.5.3' dh_installdocs dh_installchangelogs debian/rules override_dh_installman make[1]: Entering directory '/build/simka-1.5.3' dh_installman rm -rf debian/simka/usr/share/man/man1/simkaMin.1 \ debian/simka/usr/share/man/man1/simkaMin_update.1 make[1]: Leaving directory '/build/simka-1.5.3' dh_python3 dh_perl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/simka-1.5.3' dh_fixperms chmod +x debian/*/usr/bin/* make[1]: Leaving directory '/build/simka-1.5.3' dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'simka-dbgsym' in '../simka-dbgsym_1.5.3-4_i386.deb'. dpkg-deb: building package 'simka' in '../simka_1.5.3-4_i386.deb'. dpkg-deb: building package 'simkamin' in '../simkamin_1.5.3-4_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../simka_1.5.3-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/26300 and its subdirectories I: Current time: Mon Jul 12 08:35:39 -12 2021 I: pbuilder-time-stamp: 1626122139 Mon Jul 12 20:35:40 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos6-i386.debian.net. Mon Jul 12 20:35:40 UTC 2021 I: Preparing to do remote build '2' on ionos6-i386.debian.net. Mon Jul 12 20:36:47 UTC 2021 I: Deleting $TMPDIR on ionos6-i386.debian.net. Mon Jul 12 20:36:47 UTC 2021 I: simka_1.5.3-4_i386.changes: Format: 1.8 Date: Wed, 07 Apr 2021 23:12:25 +0200 Source: simka Binary: simka simka-dbgsym simkamin Architecture: i386 all Version: 1.5.3-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: simka - comparative metagenomics method dedicated to NGS datasets simkamin - approximate comparative metagenomics method dedicated to NGS data Closes: 986256 Changes: simka (1.5.3-4) unstable; urgency=medium . * Team upload. * debian/tests/run-unit-test: remove misleading argument from Python script. * Add high_cores_count.patch to fix deadlock with Python test script. (Closes: #986256) Checksums-Sha1: 68455af51c8d4fab379538f9b69c259868ccfb64 6977656 simka-dbgsym_1.5.3-4_i386.deb 3cb4e7fc6ae2ba12ab6fc2152f2ab9f261297e6d 6982 simka_1.5.3-4_i386.buildinfo f4f93b06aa529941feeccdc2d6c0465130234d6c 434408 simka_1.5.3-4_i386.deb f829b083f0d63e966df85e7fbfd2790aa5717059 32040 simkamin_1.5.3-4_all.deb Checksums-Sha256: 3ab687444192c8c17ea66f05c5f1e283111ccbc420cf19c975efea0a20dae5ac 6977656 simka-dbgsym_1.5.3-4_i386.deb ce5e75ff3c5df91b03c226f7d5479545b1b1aa47d6e4b7c1ff9e6f61aef67614 6982 simka_1.5.3-4_i386.buildinfo 004152ddcefa9e2de0d6d1217e5bcda01ce379812b7e2ff86927ddf386952719 434408 simka_1.5.3-4_i386.deb 8a49ecea2631f00403b26f419799b73c585fb140975af642cebb8445043aebf3 32040 simkamin_1.5.3-4_all.deb Files: f81d507ab43a1a987c4f2b724236eadd 6977656 debug optional simka-dbgsym_1.5.3-4_i386.deb b1ec45f2d52a90d3de42e1385e24f6d6 6982 science optional simka_1.5.3-4_i386.buildinfo 3a0ed9c694ba7f4d88c6b17602181abd 434408 science optional simka_1.5.3-4_i386.deb 7ef47c00e58e0788d6b14088a70ddc29 32040 science optional simkamin_1.5.3-4_all.deb Mon Jul 12 20:36:48 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.jMn03Rg3AO/simka_1.5.3-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.jMn03Rg3AO/simka_1.5.3-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.jMn03Rg3AO/simka_1.5.3-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.jMn03Rg3AO/b1/simka_1.5.3-4_i386.changes /srv/reproducible-results/rbuild-debian/tmp.jMn03Rg3AO/b2/simka_1.5.3-4_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.308s) 0.308s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.105s) 0.105s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Mon Jul 12 20:36:50 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Mon Jul 12 20:36:50 UTC 2021 I: simka from bullseye built successfully and reproducibly on i386. Mon Jul 12 20:36:51 UTC 2021 I: Submitting .buildinfo files to external archives: Mon Jul 12 20:36:51 UTC 2021 I: Submitting 8.0K b1/simka_1.5.3-4_i386.buildinfo.asc Mon Jul 12 20:36:52 UTC 2021 I: Submitting 8.0K b2/simka_1.5.3-4_i386.buildinfo.asc Mon Jul 12 20:36:54 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Jul 12 20:36:54 UTC 2021 I: Done submitting .buildinfo files. Mon Jul 12 20:36:54 UTC 2021 I: Removing signed simka_1.5.3-4_i386.buildinfo.asc files: removed './b1/simka_1.5.3-4_i386.buildinfo.asc' removed './b2/simka_1.5.3-4_i386.buildinfo.asc'