Mon Jun 7 20:48:45 UTC 2021 I: starting to build yanosim/bullseye/i386 on jenkins on '2021-06-07 20:48' Mon Jun 7 20:48:45 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_14/14616/console.log Mon Jun 7 20:48:45 UTC 2021 I: Downloading source for bullseye/yanosim=0.1-3 --2021-06-07 20:48:46-- http://cdn-fastly.deb.debian.org/debian/pool/main/y/yanosim/yanosim_0.1-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2000 (2.0K) Saving to: ‘yanosim_0.1-3.dsc’ 0K . 100% 122M=0s 2021-06-07 20:48:46 (122 MB/s) - ‘yanosim_0.1-3.dsc’ saved [2000/2000] Mon Jun 7 20:48:46 UTC 2021 I: yanosim_0.1-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: yanosim Binary: yanosim Architecture: any Version: 0.1-3 Maintainer: Debian Med Packaging Team Uploaders: Nilesh Patra Homepage: https://github.com/bartongroup/yanosim Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/yanosim Vcs-Git: https://salsa.debian.org/med-team/yanosim.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), python3, dh-python, python3-setuptools, python3-pysam Package-List: yanosim deb science optional arch=any Checksums-Sha1: 9541e9b084efbb9918ed48867b247294350a0b66 7948 yanosim_0.1.orig.tar.gz 081be5ccd9ed03429c1854824af9d37f3e529c54 3120 yanosim_0.1-3.debian.tar.xz Checksums-Sha256: cd6d732c3869f97bb0b69de13861a887e81b9c25d93c007ad9c8c4d6a29d462a 7948 yanosim_0.1.orig.tar.gz 7b9299ae6a56b004c80414cfc1a703d57de127188d48ab702c81e3ebe68cc972 3120 yanosim_0.1-3.debian.tar.xz Files: 4039859166283ac80a2221b08a0c3d88 7948 yanosim_0.1.orig.tar.gz 07e5f563b3e51a85edeefd48d58347fa 3120 yanosim_0.1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl8e00ARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEj3A//ZNKMPNrWCvhr/TwX2AALSM/OI2bmT6MM pd82BhZ1ENEsiOek0311QfKn0p7rAeh2RxNMtJ5n9hCk9UtdhJVcECaskouUfRSs dtU/eEpEOl6cjg9sN0L0vpfmhiKzoyeimdf4SqaLJBTfUwKzMtHK+iP0zzdBOTqU /Cl8OXKzGnBGH3UUsm3M9bcWHmL3OaXGCgit9I32cZQBu8wwEKr66f3VwJHf0zgx eloAXtRZg9FS2qV2XBcdTn42Qv6vLjYtKXhOyz4fViXLObAZM+kppj4lRm4O0Fi0 Spe9cASeJrfy7XWlh5ktRQcKwfUEoewDB/ex+SfOXhK48EQcu5PzhO9sKf4wKW0Q qs1abrov9CUQYX73YaGBiOmYSZbjCrapbBe9w49KaJC5tH+putXFFDb2Ak9GtXsG enIPjAwVVyCAe6H8oqB3xul5BM32/gvPO5ARR5VxXwtqL7H8+ZdaQ1AOnTdwc8gV tHI1Y+/7tDeqj4lzX9q/FQp6SA96mxRrmmGU8QGM+p0pEm4N5qYY5dgfiGmpnh03 ht6eteiY9uFbz7bvdUUeyKVDBdBx6abYoclRrYBAjEJLFPdl/kYz2xCDChp2gjoQ d+iNKbZUavqHMvPAo6vbCYVaAqQHVYGKxtbNetjKHJHiYq6r7mTy9JHvTyVdpMFI AvQPOOkkLGY= =hB31 -----END PGP SIGNATURE----- Mon Jun 7 20:48:46 UTC 2021 I: Checking whether the package is not for us Mon Jun 7 20:48:46 UTC 2021 I: Starting 1st build on remote node ionos6-i386.debian.net. Mon Jun 7 20:48:46 UTC 2021 I: Preparing to do remote build '1' on ionos6-i386.debian.net. Mon Jun 7 20:49:11 UTC 2021 I: Deleting $TMPDIR on ionos6-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Jul 10 15:11:47 -12 2022 I: pbuilder-time-stamp: 1657509107 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [yanosim_0.1-3.dsc] I: copying [./yanosim_0.1.orig.tar.gz] I: copying [./yanosim_0.1-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.UyqPqaz9/trustedkeys.kbx': General error gpgv: Signature made Mon Jul 27 01:14:40 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./yanosim_0.1-3.dsc dpkg-source: info: extracting yanosim in yanosim-0.1 dpkg-source: info: unpacking yanosim_0.1.orig.tar.gz dpkg-source: info: unpacking yanosim_0.1-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/16389/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=18' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='5625c8a570f74a06bacb61a2955c20cc' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='16389' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.TcZPOE3FHP/pbuilderrc_1Myw --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.TcZPOE3FHP/b1 --logfile b1/build.log yanosim_0.1-3.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos6-i386 4.19.0-16-amd64 #1 SMP Debian 4.19.181-1 (2021-03-19) x86_64 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Feb 24 2021 bash -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash -rwxr-xr-x 1 root root 124904 Sep 22 2020 date -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd -rwxr-xr-x 1 root root 100752 Sep 22 2020 df -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir -rwxr-xr-x 1 root root 83644 Feb 7 2021 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 34664 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 71928 Feb 7 2021 findmnt -rwsr-xr-x 1 root root 30112 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 210488 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe -rwxr-xr-x 1 root root 100952 Mar 2 2021 gzip -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln -rwxr-xr-x 1 root root 55572 Feb 7 2020 login -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls -rwxr-xr-x 1 root root 153124 Feb 7 2021 lsblk -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 58920 Feb 7 2021 more -rwsr-xr-x 1 root root 50720 Feb 7 2021 mount -rwxr-xr-x 1 root root 13856 Feb 7 2021 mountpoint -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Feb 24 2021 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 10 03:46 sh -> dash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Feb 7 2021 su -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync -rwxr-xr-x 1 root root 602584 Feb 16 2021 tar -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch -rwxr-xr-x 1 root root 34664 Sep 22 2020 true -rwxr-xr-x 1 root root 17768 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 30236 Feb 7 2021 umount -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir -rwxr-xr-x 1 root root 63024 Feb 7 2021 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew I: user script /srv/workspace/pbuilder/16389/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), python3, dh-python, python3-setuptools, python3-pysam dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pysam; however: Package python3-pysam is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libcurl3-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libhts3{a} libicu67{a} libldap-2.4-2{a} libmagic-mgc{a} libmagic1{a} libmpdec3{a} libnghttp2-14{a} libpipeline1{a} libpsl5{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-pkg-resources{a} python3-pysam{a} python3-setuptools{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 60 newly installed, 0 to remove and 0 not upgraded. Need to get 28.5 MB of archives. After unpacking 103 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-7 [148 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 libpython3.9-minimal i386 3.9.2-1 [801 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libexpat1 i386 2.2.10-2 [98.8 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 python3.9-minimal i386 3.9.2-1 [1956 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 python3-minimal i386 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 libmpdec3 i386 2.5.1-1 [91.9 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 libreadline8 i386 8.1-1 [173 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 libpython3.9-stdlib i386 3.9.2-1 [1703 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 python3.9 i386 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 libpython3-stdlib i386 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 python3 i386 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 32 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 33 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 34 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 35 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 36 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 37 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 38 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-6 [8776 kB] Get: 39 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7 [728 kB] Get: 40 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 41 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 42 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 44 http://deb.debian.org/debian bullseye/main i386 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 python3-distutils all 3.9.2-1 [143 kB] Get: 46 http://deb.debian.org/debian bullseye/main i386 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 47 http://deb.debian.org/debian bullseye/main i386 libbrotli1 i386 1.0.9-2+b2 [286 kB] Get: 48 http://deb.debian.org/debian bullseye/main i386 libsasl2-modules-db i386 2.1.27+dfsg-2.1 [70.0 kB] Get: 49 http://deb.debian.org/debian bullseye/main i386 libsasl2-2 i386 2.1.27+dfsg-2.1 [110 kB] Get: 50 http://deb.debian.org/debian bullseye/main i386 libldap-2.4-2 i386 2.4.57+dfsg-3 [244 kB] Get: 51 http://deb.debian.org/debian bullseye/main i386 libnghttp2-14 i386 1.43.0-1 [85.7 kB] Get: 52 http://deb.debian.org/debian bullseye/main i386 libpsl5 i386 0.21.0-1.2 [57.9 kB] Get: 53 http://deb.debian.org/debian bullseye/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 54 http://deb.debian.org/debian bullseye/main i386 libssh2-1 i386 1.9.0-2 [164 kB] Get: 55 http://deb.debian.org/debian bullseye/main i386 libcurl3-gnutls i386 7.74.0-1.2 [367 kB] Get: 56 http://deb.debian.org/debian bullseye/main i386 libdeflate0 i386 1.7-1 [48.4 kB] Get: 57 http://deb.debian.org/debian bullseye/main i386 libhts3 i386 1.11-4 [408 kB] Get: 58 http://deb.debian.org/debian bullseye/main i386 python3-pkg-resources all 52.0.0-3 [189 kB] Get: 59 http://deb.debian.org/debian bullseye/main i386 python3-pysam i386 0.15.4+ds-3+b2 [1571 kB] Get: 60 http://deb.debian.org/debian bullseye/main i386 python3-setuptools all 52.0.0-3 [441 kB] Fetched 28.5 MB in 0s (86.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-7_i386.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../1-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_i386.deb ... 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Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:i386 (67.1-6) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:i386 (1.0.9-2+b2) ... Setting up libnghttp2-14:i386 (1.43.0-1) ... Setting up libmagic1:i386 (1:5.39-3) ... Setting up libdeflate0:i386 (1.7-1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libsasl2-modules-db:i386 (2.1.27+dfsg-2.1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libsigsegv2:i386 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up libsasl2-2:i386 (2.1.27+dfsg-2.1) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libmpdec3:i386 (2.5.1-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libssh2-1:i386 (1.9.0-2) ... Setting up libelf1:i386 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:i386 (2.9.10+dfsg-6.7) ... Setting up libfile-stripnondeterminism-perl (1.11.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libreadline8:i386 (8.1-1) ... Setting up libldap-2.4-2:i386 (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up libcurl3-gnutls:i386 (7.74.0-1.2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.11.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libpython3.9-stdlib:i386 (3.9.2-1) ... Setting up libpython3-stdlib:i386 (3.9.2-3) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libhts3:i386 (1.11-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up python3.9 (3.9.2-1) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-pkg-resources (52.0.0-3) ... Setting up python3-distutils (3.9.2-1) ... Setting up dh-python (4.20201102+nmu1) ... Setting up python3-pysam (0.15.4+ds-3+b2) ... Setting up python3-setuptools (52.0.0-3) ... Processing triggers for libc-bin (2.31-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/yanosim-0.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package yanosim dpkg-buildpackage: info: source version 0.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build' (and everything under it) 'build/bdist.linux-i386' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py creating /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim copying yanosim/main.py -> /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim copying yanosim/utils.py -> /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim copying yanosim/model.py -> /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim copying yanosim/__init__.py -> /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim copying yanosim/simulate.py -> /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim dh_auto_test -O--buildsystem=pybuild I: pybuild base:232: cd /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build; python3.9 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/yanosim-0.1/debian/yanosim running install running build running build_py running install_lib creating /build/yanosim-0.1/debian/yanosim/usr creating /build/yanosim-0.1/debian/yanosim/usr/lib creating /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9 creating /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages creating /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim copying /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim/main.py -> /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim copying /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim/utils.py -> /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim creating /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim/__pycache__ copying /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim/__pycache__/__init__.cpython-39.pyc -> /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim/__pycache__ copying /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim/model.py -> /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim copying /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim/__init__.py -> /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim copying /build/yanosim-0.1/.pybuild/cpython3_3.9_yanosim/build/yanosim/simulate.py -> /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim byte-compiling /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim/main.py to main.cpython-39.pyc byte-compiling /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim/utils.py to utils.cpython-39.pyc byte-compiling /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim/model.py to model.cpython-39.pyc byte-compiling /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim/__init__.py to __init__.cpython-39.pyc byte-compiling /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim/simulate.py to simulate.cpython-39.pyc running install_egg_info running egg_info creating yanosim.egg-info writing yanosim.egg-info/PKG-INFO writing dependency_links to yanosim.egg-info/dependency_links.txt writing entry points to yanosim.egg-info/entry_points.txt writing requirements to yanosim.egg-info/requires.txt writing top-level names to yanosim.egg-info/top_level.txt writing manifest file 'yanosim.egg-info/SOURCES.txt' reading manifest file 'yanosim.egg-info/SOURCES.txt' writing manifest file 'yanosim.egg-info/SOURCES.txt' Copying yanosim.egg-info to /build/yanosim-0.1/debian/yanosim/usr/lib/python3.9/dist-packages/yanosim-0.1.egg-info Skipping SOURCES.txt running install_scripts Installing yanosim script to /build/yanosim-0.1/debian/yanosim/usr/bin dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package yanosim: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'yanosim' in '../yanosim_0.1-3_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../yanosim_0.1-3_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/16389 and its subdirectories I: Current time: Sun Jul 10 15:12:11 -12 2022 I: pbuilder-time-stamp: 1657509131 Mon Jun 7 20:49:12 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos12-i386.debian.net. Mon Jun 7 20:49:12 UTC 2021 I: Preparing to do remote build '2' on ionos12-i386.debian.net. Mon Jun 7 20:54:12 UTC 2021 I: Deleting $TMPDIR on ionos12-i386.debian.net. Mon Jun 7 20:54:12 UTC 2021 I: yanosim_0.1-3_i386.changes: Format: 1.8 Date: Mon, 27 Jul 2020 15:12:53 +0200 Source: yanosim Binary: yanosim Architecture: i386 Version: 0.1-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: yanosim - read simulator nanopore DRS datasets Changes: yanosim (0.1-3) unstable; urgency=medium . * Team upload. * make sure python3-pysam is avaliable on all architectures to enable testing migration Checksums-Sha1: 8ecdfc82a7a57c202f2cc315f607a7ae58b58686 5667 yanosim_0.1-3_i386.buildinfo c9965a36ff25179ca1f91e72b0f22d7dc239e607 9556 yanosim_0.1-3_i386.deb Checksums-Sha256: 14253e0e61476f7960adacd6e72229e7971b30226bf93918c7c710cd1806dbb4 5667 yanosim_0.1-3_i386.buildinfo 35e7652fc9f07dcd702ba29f18fbd43217b5d84fab6786f44075116dc3da41f7 9556 yanosim_0.1-3_i386.deb Files: dd3b9ca3ae537a071ca33e3cf6e4b374 5667 science optional yanosim_0.1-3_i386.buildinfo 958b311508339f8e1728cdcc82b8f5e0 9556 science optional yanosim_0.1-3_i386.deb Mon Jun 7 20:54:14 UTC 2021 I: diffoscope 172 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.TcZPOE3FHP/yanosim_0.1-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.TcZPOE3FHP/yanosim_0.1-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.TcZPOE3FHP/yanosim_0.1-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.TcZPOE3FHP/b1/yanosim_0.1-3_i386.changes /srv/reproducible-results/rbuild-debian/tmp.TcZPOE3FHP/b2/yanosim_0.1-3_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.619s) 0.619s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.021s) 0.021s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Mon Jun 7 20:54:16 UTC 2021 I: diffoscope 172 found no differences in the changes files, and a .buildinfo file also exists. Mon Jun 7 20:54:16 UTC 2021 I: yanosim from bullseye built successfully and reproducibly on i386. Mon Jun 7 20:54:17 UTC 2021 I: Submitting .buildinfo files to external archives: Mon Jun 7 20:54:17 UTC 2021 I: Submitting 8.0K b1/yanosim_0.1-3_i386.buildinfo.asc Mon Jun 7 20:54:19 UTC 2021 I: Submitting 8.0K b2/yanosim_0.1-3_i386.buildinfo.asc Mon Jun 7 20:54:20 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Jun 7 20:54:20 UTC 2021 I: Done submitting .buildinfo files. Mon Jun 7 20:54:20 UTC 2021 I: Removing signed yanosim_0.1-3_i386.buildinfo.asc files: removed './b1/yanosim_0.1-3_i386.buildinfo.asc' removed './b2/yanosim_0.1-3_i386.buildinfo.asc'