Tue Aug 11 07:31:15 UTC 2020 I: starting to build kissplice/buster/arm64 on jenkins on '2020-08-11 07:31' Tue Aug 11 07:31:15 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_25/1493/console.log Tue Aug 11 07:31:15 UTC 2020 I: Downloading source for buster/kissplice=2.4.0-p1-4 --2020-08-11 07:31:15-- http://deb.debian.org/debian/pool/main/k/kissplice/kissplice_2.4.0-p1-4.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2206 (2.2K) Saving to: ‘kissplice_2.4.0-p1-4.dsc’ 0K .. 100% 154M=0s 2020-08-11 07:31:15 (154 MB/s) - ‘kissplice_2.4.0-p1-4.dsc’ saved [2206/2206] Tue Aug 11 07:31:15 UTC 2020 I: kissplice_2.4.0-p1-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: kissplice Binary: kissplice Architecture: any-amd64 any-arm64 any-mips64 any-mips64el any-ia64 any-ppc64 any-ppc64el any-sparc64 Version: 2.4.0-p1-4 Maintainer: Debian Med Packaging Team Uploaders: David Parsons , Andreas Tille Homepage: http://kissplice.prabi.fr/ Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/kissplice Vcs-Git: https://salsa.debian.org/med-team/kissplice.git Build-Depends: debhelper (>= 11~), dh-python, cmake, python-dev, zlib1g-dev Package-List: kissplice deb science optional arch=any-amd64,any-arm64,any-mips64,any-mips64el,any-ia64,any-ppc64,any-ppc64el,any-sparc64 Checksums-Sha1: 1a67d21cd51456a986d0ba8e00674e02c261b056 7617900 kissplice_2.4.0-p1.orig.tar.gz a57f912ffd293d0e4a661c2e0a5b89f1607ba0dd 5200 kissplice_2.4.0-p1-4.debian.tar.xz Checksums-Sha256: f4569b444cd0b10eba2a5c3f883d3fcbaf092201a9ebdc4d4c0030b4641676f7 7617900 kissplice_2.4.0-p1.orig.tar.gz 65b4f856ba2f532afd34c68b812941a182f24f7968a1c3c4488a0f863a9e12e7 5200 kissplice_2.4.0-p1-4.debian.tar.xz Files: 36ef9e22a0607f0ab4516cc0d4cf9fea 7617900 kissplice_2.4.0-p1.orig.tar.gz 16b7d9f30268128595f87fe8a1e44285 5200 kissplice_2.4.0-p1-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlw0kCYRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFf0g/+JpBhcJhpn2JByrjqmnUDO9X/wJCXuqmM mmIKv74CrUVQz1c378qL5VI7TgbE9m3EmsDfQuO5LgjRDG3e2lJeiNuKxkwzqZBw sd7oAhZBF2fk6+LXcxJxOoXYnzxf86OkqEMGgNDKfZ3lRr+cpWiTvN6wW3jQ7/uB tPA3LKaDbevjcK4o4Vt1XPsUL0lcKYv1vrT71EaZh1LdYuembLGAPmGDBhbCPJ4d EE4kcvBRSV2t1POaxxHeyvsB7P1PscP1C60xVLLiAfW6mhad314BxR5e/xnC9LYk MmB06mxmDcpA8DJ9nuJCgSzPlgtZNAEjNfgSVOSlPl4LHX7AsvTxcgcmILKlQV2g ZHBHQask49j15VlUO0wk5Z//PpI1ixGa330lraExu6G/HzjHZyIWppELWjUj0r6E 82xcVWIO5/ehg5WffhTwRSp907ReqR916o5ugbVfN4zehBiFWTT6mOG7JLwxjbhF DHN+OPNfL7i2wRnSSgxohfagTJCRa3BDrGeP3Drj0CBZQgOskHAXTDLnzb9rOEb6 aZ1Q2v25gan/fmHwPIykwWST0dinFJQGC3+VIlwA3/1zTfz3bOR9XORYs1h78sUc IDg287TgCnTg6onZQIIG8ddqo9rP9ueOC5iSHDWjSEOzn457Qq0X94oKiNPyYPIv 3pPfqdsF9FY= =7PFi -----END PGP SIGNATURE----- Tue Aug 11 07:31:15 UTC 2020 I: Checking whether the package is not for us Tue Aug 11 07:31:15 UTC 2020 I: Starting 1st build on remote node codethink-sled15-arm64.debian.net. Tue Aug 11 07:31:15 UTC 2020 I: Preparing to do remote build '1' on codethink-sled15-arm64.debian.net. Tue Aug 11 07:35:01 UTC 2020 I: Deleting $TMPDIR on codethink-sled15-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Sep 13 01:54:26 -12 2021 I: pbuilder-time-stamp: 1631541266 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [kissplice_2.4.0-p1-4.dsc] I: copying [./kissplice_2.4.0-p1.orig.tar.gz] I: copying [./kissplice_2.4.0-p1-4.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/var/lib/jenkins/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Jan 7 23:57:26 2019 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./kissplice_2.4.0-p1-4.dsc dpkg-source: info: extracting kissplice in kissplice-2.4.0-p1 dpkg-source: info: unpacking kissplice_2.4.0-p1.orig.tar.gz dpkg-source: info: unpacking kissplice_2.4.0-p1-4.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/31873/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='31873' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.KhEgvVl9Jm/pbuilderrc_WERb --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.KhEgvVl9Jm/b1 --logfile b1/build.log kissplice_2.4.0-p1-4.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink-sled15-arm64 4.4.0-186-generic #216-Ubuntu SMP Wed Jul 1 05:35:21 UTC 2020 aarch64 GNU/Linux I: ls -l /bin total 4928 -rwxr-xr-x 1 root root 1216928 Apr 17 2019 bash -rwxr-xr-x 3 root root 34808 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14264 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 35576 Feb 28 2019 cat -rwxr-xr-x 1 root root 60256 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 56096 Feb 28 2019 chmod -rwxr-xr-x 1 root root 64368 Feb 28 2019 chown -rwxr-xr-x 1 root root 134632 Feb 28 2019 cp -rwxr-xr-x 1 root root 129536 Jan 17 2019 dash -rwxr-xr-x 1 root root 97136 Feb 28 2019 date -rwxr-xr-x 1 root root 76736 Feb 28 2019 dd -rwxr-xr-x 1 root root 93752 Feb 28 2019 df -rwxr-xr-x 1 root root 138848 Feb 28 2019 dir -rwxr-xr-x 1 root root 75984 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 31368 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 27256 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68792 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34824 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 174304 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 89656 Jan 5 2019 gzip -rwxr-xr-x 1 root root 18440 Sep 26 2018 hostname -rwxr-xr-x 1 root root 64472 Feb 28 2019 ln -rwxr-xr-x 1 root root 52544 Jul 26 2018 login -rwxr-xr-x 1 root root 138848 Feb 28 2019 ls -rwxr-xr-x 1 root root 108552 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 76840 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 64480 Feb 28 2019 mknod -rwxr-xr-x 1 root root 39736 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 38840 Jan 9 2019 more -rwsr-xr-x 1 root root 47112 Jan 9 2019 mount -rwxr-xr-x 1 root root 14344 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138736 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35560 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 43712 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68440 Feb 28 2019 rm -rwxr-xr-x 1 root root 39624 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 19144 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Sep 11 02:48 sh -> dash -rwxr-xr-x 1 root root 31384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 72480 Feb 28 2019 stty -rwsr-xr-x 1 root root 59424 Jan 9 2019 su -rwxr-xr-x 1 root root 31416 Feb 28 2019 sync -rwxr-xr-x 1 root root 449416 Apr 23 2019 tar -rwxr-xr-x 1 root root 10560 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 88968 Feb 28 2019 touch -rwxr-xr-x 1 root root 27256 Feb 28 2019 true -rwxr-xr-x 1 root root 14264 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 30728 Jan 9 2019 umount -rwxr-xr-x 1 root root 31384 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138848 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34824 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/31873/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), dh-python, cmake, python-dev, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on python-dev; however: Package python-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbsd0{a} libcroco3{a} libcurl4{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libgssapi-krb5-2{a} libicu63{a} libjsoncpp1{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.4-2{a} libldap-common{a} libmagic-mgc{a} libmagic1{a} libmpdec2{a} libncurses6{a} libnghttp2-14{a} libpipeline1{a} libprocps7{a} libpsl5{a} libpython-dev{a} libpython-stdlib{a} libpython2-dev{a} libpython2-stdlib{a} libpython2.7{a} libpython2.7-dev{a} libpython2.7-minimal{a} libpython2.7-stdlib{a} libpython3-stdlib{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libreadline7{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libssl1.1{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} lsb-base{a} m4{a} man-db{a} mime-support{a} po-debconf{a} procps{a} python{a} python-dev{a} python-minimal{a} python2{a} python2-dev{a} python2-minimal{a} python2.7{a} python2.7-dev{a} python2.7-minimal{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.7{a} python3.7-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix shared-mime-info wget xdg-user-dirs 0 packages upgraded, 91 newly installed, 0 to remove and 0 not upgraded. Need to get 69.2 MB of archives. After unpacking 204 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main arm64 libbsd0 arm64 0.9.1-2 [97.4 kB] Get: 2 http://deb.debian.org/debian buster/main arm64 bsdmainutils arm64 11.1.2+b1 [185 kB] Get: 3 http://deb.debian.org/debian buster/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get: 4 http://deb.debian.org/debian buster/main arm64 groff-base arm64 1.22.4-3 [869 kB] Get: 5 http://deb.debian.org/debian buster/main arm64 libpipeline1 arm64 1.5.1-2 [29.8 kB] Get: 6 http://deb.debian.org/debian buster/main arm64 man-db arm64 2.8.5-2 [1258 kB] Get: 7 http://deb.debian.org/debian buster/main arm64 libpython2.7-minimal arm64 2.7.16-2+deb10u1 [395 kB] Get: 8 http://deb.debian.org/debian buster/main arm64 python2.7-minimal arm64 2.7.16-2+deb10u1 [1292 kB] Get: 9 http://deb.debian.org/debian buster/main arm64 python2-minimal arm64 2.7.16-1 [41.4 kB] Get: 10 http://deb.debian.org/debian buster/main arm64 python-minimal arm64 2.7.16-1 [21.0 kB] Get: 11 http://deb.debian.org/debian buster/main arm64 libssl1.1 arm64 1.1.1d-0+deb10u3 [1382 kB] Get: 12 http://deb.debian.org/debian buster/main arm64 mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main arm64 libexpat1 arm64 2.2.6-2+deb10u1 [85.4 kB] Get: 14 http://deb.debian.org/debian buster/main arm64 readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main arm64 libreadline7 arm64 7.0-5 [134 kB] Get: 16 http://deb.debian.org/debian buster/main arm64 libpython2.7-stdlib arm64 2.7.16-2+deb10u1 [1890 kB] Get: 17 http://deb.debian.org/debian buster/main arm64 python2.7 arm64 2.7.16-2+deb10u1 [305 kB] Get: 18 http://deb.debian.org/debian buster/main arm64 libpython2-stdlib arm64 2.7.16-1 [20.8 kB] Get: 19 http://deb.debian.org/debian buster/main arm64 libpython-stdlib arm64 2.7.16-1 [20.8 kB] Get: 20 http://deb.debian.org/debian buster/main arm64 python2 arm64 2.7.16-1 [41.6 kB] Get: 21 http://deb.debian.org/debian buster/main arm64 python arm64 2.7.16-1 [22.8 kB] Get: 22 http://deb.debian.org/debian buster/main arm64 libpython3.7-minimal arm64 3.7.3-2+deb10u2 [588 kB] Get: 23 http://deb.debian.org/debian buster/main arm64 python3.7-minimal arm64 3.7.3-2+deb10u2 [1404 kB] Get: 24 http://deb.debian.org/debian buster/main arm64 python3-minimal arm64 3.7.3-1 [36.6 kB] Get: 25 http://deb.debian.org/debian buster/main arm64 libmpdec2 arm64 2.4.2-2 [77.7 kB] Get: 26 http://deb.debian.org/debian buster/main arm64 libpython3.7-stdlib arm64 3.7.3-2+deb10u2 [1641 kB] Get: 27 http://deb.debian.org/debian buster/main arm64 python3.7 arm64 3.7.3-2+deb10u2 [330 kB] Get: 28 http://deb.debian.org/debian buster/main arm64 libpython3-stdlib arm64 3.7.3-1 [20.0 kB] Get: 29 http://deb.debian.org/debian buster/main arm64 python3 arm64 3.7.3-1 [61.5 kB] Get: 30 http://deb.debian.org/debian buster/main arm64 libncurses6 arm64 6.1+20181013-2+deb10u2 [92.6 kB] Get: 31 http://deb.debian.org/debian buster/main arm64 libprocps7 arm64 2:3.3.15-2 [58.0 kB] Get: 32 http://deb.debian.org/debian buster/main arm64 lsb-base all 10.2019051400 [28.4 kB] Get: 33 http://deb.debian.org/debian buster/main arm64 procps arm64 2:3.3.15-2 [245 kB] Get: 34 http://deb.debian.org/debian buster/main arm64 sensible-utils all 0.0.12 [15.8 kB] Get: 35 http://deb.debian.org/debian buster/main arm64 libmagic-mgc arm64 1:5.35-4+deb10u1 [242 kB] Get: 36 http://deb.debian.org/debian buster/main arm64 libmagic1 arm64 1:5.35-4+deb10u1 [115 kB] Get: 37 http://deb.debian.org/debian buster/main arm64 file arm64 1:5.35-4+deb10u1 [66.4 kB] Get: 38 http://deb.debian.org/debian buster/main arm64 gettext-base arm64 0.19.8.1-9 [120 kB] Get: 39 http://deb.debian.org/debian buster/main arm64 libsigsegv2 arm64 2.12-2 [32.3 kB] Get: 40 http://deb.debian.org/debian buster/main arm64 m4 arm64 1.4.18-2 [198 kB] Get: 41 http://deb.debian.org/debian buster/main arm64 autoconf all 2.69-11 [341 kB] Get: 42 http://deb.debian.org/debian buster/main arm64 autotools-dev all 20180224.1 [77.0 kB] Get: 43 http://deb.debian.org/debian buster/main arm64 automake all 1:1.16.1-4 [771 kB] Get: 44 http://deb.debian.org/debian buster/main arm64 autopoint all 0.19.8.1-9 [434 kB] Get: 45 http://deb.debian.org/debian buster/main arm64 cmake-data all 3.13.4-1 [1476 kB] Get: 46 http://deb.debian.org/debian buster/main arm64 libicu63 arm64 63.1-6+deb10u1 [8151 kB] Get: 47 http://deb.debian.org/debian buster/main arm64 libxml2 arm64 2.9.4+dfsg1-7+b3 [623 kB] Get: 48 http://deb.debian.org/debian buster/main arm64 libarchive13 arm64 3.3.3-4+deb10u1 [291 kB] Get: 49 http://deb.debian.org/debian buster/main arm64 libkeyutils1 arm64 1.6-6 [14.9 kB] Get: 50 http://deb.debian.org/debian buster/main arm64 libkrb5support0 arm64 1.17-3 [64.7 kB] Get: 51 http://deb.debian.org/debian buster/main arm64 libk5crypto3 arm64 1.17-3 [122 kB] Get: 52 http://deb.debian.org/debian buster/main arm64 libkrb5-3 arm64 1.17-3 [353 kB] Get: 53 http://deb.debian.org/debian buster/main arm64 libgssapi-krb5-2 arm64 1.17-3 [150 kB] Get: 54 http://deb.debian.org/debian buster/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-1+deb10u1 [69.3 kB] Get: 55 http://deb.debian.org/debian buster/main arm64 libsasl2-2 arm64 2.1.27+dfsg-1+deb10u1 [105 kB] Get: 56 http://deb.debian.org/debian buster/main arm64 libldap-common all 2.4.47+dfsg-3+deb10u2 [89.7 kB] Get: 57 http://deb.debian.org/debian buster/main arm64 libldap-2.4-2 arm64 2.4.47+dfsg-3+deb10u2 [216 kB] Get: 58 http://deb.debian.org/debian buster/main arm64 libnghttp2-14 arm64 1.36.0-2+deb10u1 [81.9 kB] Get: 59 http://deb.debian.org/debian buster/main arm64 libpsl5 arm64 0.20.2-2 [53.6 kB] Get: 60 http://deb.debian.org/debian buster/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2 [55.7 kB] Get: 61 http://deb.debian.org/debian buster/main arm64 libssh2-1 arm64 1.8.0-2.1 [135 kB] Get: 62 http://deb.debian.org/debian buster/main arm64 libcurl4 arm64 7.64.0-4+deb10u1 [312 kB] Get: 63 http://deb.debian.org/debian buster/main arm64 libjsoncpp1 arm64 1.7.4-3 [71.0 kB] Get: 64 http://deb.debian.org/debian buster/main arm64 librhash0 arm64 1.3.8-1 [121 kB] Get: 65 http://deb.debian.org/debian buster/main arm64 libuv1 arm64 1.24.1-1 [105 kB] Get: 66 http://deb.debian.org/debian buster/main arm64 cmake arm64 3.13.4-1 [3046 kB] Get: 67 http://deb.debian.org/debian buster/main arm64 libtool all 2.4.6-9 [547 kB] Get: 68 http://deb.debian.org/debian buster/main arm64 dh-autoreconf all 19 [16.9 kB] Get: 69 http://deb.debian.org/debian buster/main arm64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 70 http://deb.debian.org/debian buster/main arm64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 71 http://deb.debian.org/debian buster/main arm64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 72 http://deb.debian.org/debian buster/main arm64 libelf1 arm64 0.176-1.1 [160 kB] Get: 73 http://deb.debian.org/debian buster/main arm64 dwz arm64 0.12-3 [71.7 kB] Get: 74 http://deb.debian.org/debian buster/main arm64 libglib2.0-0 arm64 2.58.3-2+deb10u2 [1185 kB] Get: 75 http://deb.debian.org/debian buster/main arm64 libcroco3 arm64 0.6.12-3 [140 kB] Get: 76 http://deb.debian.org/debian buster/main arm64 gettext arm64 0.19.8.1-9 [1261 kB] Get: 77 http://deb.debian.org/debian buster/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 78 http://deb.debian.org/debian buster/main arm64 po-debconf all 1.0.21 [248 kB] Get: 79 http://deb.debian.org/debian buster/main arm64 debhelper all 12.1.1 [1016 kB] Get: 80 http://deb.debian.org/debian buster/main arm64 python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 81 http://deb.debian.org/debian buster/main arm64 python3-distutils all 3.7.3-1 [142 kB] Get: 82 http://deb.debian.org/debian buster/main arm64 dh-python all 3.20190308 [99.3 kB] Get: 83 http://deb.debian.org/debian buster/main arm64 libexpat1-dev arm64 2.2.6-2+deb10u1 [128 kB] Get: 84 http://deb.debian.org/debian buster/main arm64 libpython2.7 arm64 2.7.16-2+deb10u1 [958 kB] Get: 85 http://deb.debian.org/debian buster/main arm64 libpython2.7-dev arm64 2.7.16-2+deb10u1 [31.5 MB] Get: 86 http://deb.debian.org/debian buster/main arm64 libpython2-dev arm64 2.7.16-1 [20.9 kB] Get: 87 http://deb.debian.org/debian buster/main arm64 libpython-dev arm64 2.7.16-1 [20.9 kB] Get: 88 http://deb.debian.org/debian buster/main arm64 python2.7-dev arm64 2.7.16-2+deb10u1 [296 kB] Get: 89 http://deb.debian.org/debian buster/main arm64 python2-dev arm64 2.7.16-1 [1216 B] Get: 90 http://deb.debian.org/debian buster/main arm64 python-dev arm64 2.7.16-1 [1192 B] Get: 91 http://deb.debian.org/debian buster/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-1 [210 kB] Fetched 69.2 MB in 3s (24.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_arm64.deb ... Unpacking libbsd0:arm64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_arm64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../02-libuchardet0_0.0.6-3_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_arm64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../04-libpipeline1_1.5.1-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_arm64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libpython2.7-minimal:arm64. Preparing to unpack .../06-libpython2.7-minimal_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7-minimal:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../07-python2.7-minimal_2.7.16-2+deb10u1_arm64.deb ... Unpacking python2.7-minimal (2.7.16-2+deb10u1) ... Selecting previously unselected package python2-minimal. Preparing to unpack .../08-python2-minimal_2.7.16-1_arm64.deb ... Unpacking python2-minimal (2.7.16-1) ... Selecting previously unselected package python-minimal. Preparing to unpack .../09-python-minimal_2.7.16-1_arm64.deb ... Unpacking python-minimal (2.7.16-1) ... Selecting previously unselected package libssl1.1:arm64. Preparing to unpack .../10-libssl1.1_1.1.1d-0+deb10u3_arm64.deb ... Unpacking libssl1.1:arm64 (1.1.1d-0+deb10u3) ... Selecting previously unselected package mime-support. Preparing to unpack .../11-mime-support_3.62_all.deb ... Unpacking mime-support (3.62) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../12-libexpat1_2.2.6-2+deb10u1_arm64.deb ... Unpacking libexpat1:arm64 (2.2.6-2+deb10u1) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package libreadline7:arm64. Preparing to unpack .../14-libreadline7_7.0-5_arm64.deb ... Unpacking libreadline7:arm64 (7.0-5) ... Selecting previously unselected package libpython2.7-stdlib:arm64. Preparing to unpack .../15-libpython2.7-stdlib_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7-stdlib:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7. Preparing to unpack .../16-python2.7_2.7.16-2+deb10u1_arm64.deb ... Unpacking python2.7 (2.7.16-2+deb10u1) ... Selecting previously unselected package libpython2-stdlib:arm64. Preparing to unpack .../17-libpython2-stdlib_2.7.16-1_arm64.deb ... Unpacking libpython2-stdlib:arm64 (2.7.16-1) ... Selecting previously unselected package libpython-stdlib:arm64. Preparing to unpack .../18-libpython-stdlib_2.7.16-1_arm64.deb ... Unpacking libpython-stdlib:arm64 (2.7.16-1) ... Setting up libpython2.7-minimal:arm64 (2.7.16-2+deb10u1) ... Setting up python2.7-minimal (2.7.16-2+deb10u1) ... Setting up python2-minimal (2.7.16-1) ... Selecting previously unselected package python2. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20631 files and directories currently installed.) Preparing to unpack .../python2_2.7.16-1_arm64.deb ... Unpacking python2 (2.7.16-1) ... Setting up python-minimal (2.7.16-1) ... Selecting previously unselected package python. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20664 files and directories currently installed.) Preparing to unpack .../python_2.7.16-1_arm64.deb ... Unpacking python (2.7.16-1) ... Selecting previously unselected package libpython3.7-minimal:arm64. Preparing to unpack .../libpython3.7-minimal_3.7.3-2+deb10u2_arm64.deb ... Unpacking libpython3.7-minimal:arm64 (3.7.3-2+deb10u2) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../python3.7-minimal_3.7.3-2+deb10u2_arm64.deb ... Unpacking python3.7-minimal (3.7.3-2+deb10u2) ... Setting up libssl1.1:arm64 (1.1.1d-0+deb10u3) ... Setting up libpython3.7-minimal:arm64 (3.7.3-2+deb10u2) ... Setting up libexpat1:arm64 (2.2.6-2+deb10u1) ... Setting up python3.7-minimal (3.7.3-2+deb10u2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20918 files and directories currently installed.) Preparing to unpack .../python3-minimal_3.7.3-1_arm64.deb ... Unpacking python3-minimal (3.7.3-1) ... Selecting previously unselected package libmpdec2:arm64. Preparing to unpack .../libmpdec2_2.4.2-2_arm64.deb ... Unpacking libmpdec2:arm64 (2.4.2-2) ... Selecting previously unselected package libpython3.7-stdlib:arm64. Preparing to unpack .../libpython3.7-stdlib_3.7.3-2+deb10u2_arm64.deb ... Unpacking libpython3.7-stdlib:arm64 (3.7.3-2+deb10u2) ... Selecting previously unselected package python3.7. Preparing to unpack .../python3.7_3.7.3-2+deb10u2_arm64.deb ... Unpacking python3.7 (3.7.3-2+deb10u2) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../libpython3-stdlib_3.7.3-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.7.3-1) ... Setting up python3-minimal (3.7.3-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21330 files and directories currently installed.) Preparing to unpack .../00-python3_3.7.3-1_arm64.deb ... Unpacking python3 (3.7.3-1) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../01-libncurses6_6.1+20181013-2+deb10u2_arm64.deb ... Unpacking libncurses6:arm64 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package libprocps7:arm64. Preparing to unpack .../02-libprocps7_2%3a3.3.15-2_arm64.deb ... Unpacking libprocps7:arm64 (2:3.3.15-2) ... Selecting previously unselected package lsb-base. Preparing to unpack .../03-lsb-base_10.2019051400_all.deb ... Unpacking lsb-base (10.2019051400) ... Selecting previously unselected package procps. Preparing to unpack .../04-procps_2%3a3.3.15-2_arm64.deb ... Unpacking procps (2:3.3.15-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../07-libmagic1_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking libmagic1:arm64 (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.19.8.1-9_arm64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../10-libsigsegv2_2.12-2_arm64.deb ... Unpacking libsigsegv2:arm64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.18-2_arm64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package cmake-data. Preparing to unpack .../16-cmake-data_3.13.4-1_all.deb ... Unpacking cmake-data (3.13.4-1) ... Selecting previously unselected package libicu63:arm64. Preparing to unpack .../17-libicu63_63.1-6+deb10u1_arm64.deb ... Unpacking libicu63:arm64 (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../18-libxml2_2.9.4+dfsg1-7+b3_arm64.deb ... Unpacking libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libarchive13:arm64. Preparing to unpack .../19-libarchive13_3.3.3-4+deb10u1_arm64.deb ... Unpacking libarchive13:arm64 (3.3.3-4+deb10u1) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../20-libkeyutils1_1.6-6_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6-6) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../21-libkrb5support0_1.17-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.17-3) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../22-libk5crypto3_1.17-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.17-3) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../23-libkrb5-3_1.17-3_arm64.deb ... Unpacking libkrb5-3:arm64 (1.17-3) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../24-libgssapi-krb5-2_1.17-3_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.17-3) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../25-libsasl2-modules-db_2.1.27+dfsg-1+deb10u1_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.27+dfsg-1+deb10u1) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../26-libsasl2-2_2.1.27+dfsg-1+deb10u1_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.27+dfsg-1+deb10u1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../27-libldap-common_2.4.47+dfsg-3+deb10u2_all.deb ... Unpacking libldap-common (2.4.47+dfsg-3+deb10u2) ... Selecting previously unselected package libldap-2.4-2:arm64. Preparing to unpack .../28-libldap-2.4-2_2.4.47+dfsg-3+deb10u2_arm64.deb ... Unpacking libldap-2.4-2:arm64 (2.4.47+dfsg-3+deb10u2) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../29-libnghttp2-14_1.36.0-2+deb10u1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.36.0-2+deb10u1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../30-libpsl5_0.20.2-2_arm64.deb ... Unpacking libpsl5:arm64 (0.20.2-2) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../31-librtmp1_2.4+20151223.gitfa8646d.1-2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../32-libssh2-1_1.8.0-2.1_arm64.deb ... Unpacking libssh2-1:arm64 (1.8.0-2.1) ... Selecting previously unselected package libcurl4:arm64. Preparing to unpack .../33-libcurl4_7.64.0-4+deb10u1_arm64.deb ... Unpacking libcurl4:arm64 (7.64.0-4+deb10u1) ... Selecting previously unselected package libjsoncpp1:arm64. Preparing to unpack .../34-libjsoncpp1_1.7.4-3_arm64.deb ... Unpacking libjsoncpp1:arm64 (1.7.4-3) ... Selecting previously unselected package librhash0:arm64. Preparing to unpack .../35-librhash0_1.3.8-1_arm64.deb ... Unpacking librhash0:arm64 (1.3.8-1) ... Selecting previously unselected package libuv1:arm64. Preparing to unpack .../36-libuv1_1.24.1-1_arm64.deb ... Unpacking libuv1:arm64 (1.24.1-1) ... Selecting previously unselected package cmake. Preparing to unpack .../37-cmake_3.13.4-1_arm64.deb ... Unpacking cmake (3.13.4-1) ... Selecting previously unselected package libtool. Preparing to unpack .../38-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../39-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../40-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../41-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../42-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../43-libelf1_0.176-1.1_arm64.deb ... Unpacking libelf1:arm64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../44-dwz_0.12-3_arm64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:arm64. Preparing to unpack .../45-libglib2.0-0_2.58.3-2+deb10u2_arm64.deb ... Unpacking libglib2.0-0:arm64 (2.58.3-2+deb10u2) ... Selecting previously unselected package libcroco3:arm64. Preparing to unpack .../46-libcroco3_0.6.12-3_arm64.deb ... Unpacking libcroco3:arm64 (0.6.12-3) ... Selecting previously unselected package gettext. Preparing to unpack .../47-gettext_0.19.8.1-9_arm64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../48-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../49-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../50-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../51-python3-lib2to3_3.7.3-1_all.deb ... Unpacking python3-lib2to3 (3.7.3-1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../52-python3-distutils_3.7.3-1_all.deb ... Unpacking python3-distutils (3.7.3-1) ... Selecting previously unselected package dh-python. Preparing to unpack .../53-dh-python_3.20190308_all.deb ... Unpacking dh-python (3.20190308) ... Selecting previously unselected package libexpat1-dev:arm64. Preparing to unpack .../54-libexpat1-dev_2.2.6-2+deb10u1_arm64.deb ... Unpacking libexpat1-dev:arm64 (2.2.6-2+deb10u1) ... Selecting previously unselected package libpython2.7:arm64. Preparing to unpack .../55-libpython2.7_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package libpython2.7-dev:arm64. Preparing to unpack .../56-libpython2.7-dev_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7-dev:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package libpython2-dev:arm64. Preparing to unpack .../57-libpython2-dev_2.7.16-1_arm64.deb ... Unpacking libpython2-dev:arm64 (2.7.16-1) ... Selecting previously unselected package libpython-dev:arm64. Preparing to unpack .../58-libpython-dev_2.7.16-1_arm64.deb ... Unpacking libpython-dev:arm64 (2.7.16-1) ... Selecting previously unselected package python2.7-dev. Preparing to unpack .../59-python2.7-dev_2.7.16-2+deb10u1_arm64.deb ... Unpacking python2.7-dev (2.7.16-2+deb10u1) ... Selecting previously unselected package python2-dev. Preparing to unpack .../60-python2-dev_2.7.16-1_arm64.deb ... Unpacking python2-dev (2.7.16-1) ... Selecting previously unselected package python-dev. Preparing to unpack .../61-python-dev_2.7.16-1_arm64.deb ... Unpacking python-dev (2.7.16-1) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../62-zlib1g-dev_1%3a1.2.11.dfsg-1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.2.11.dfsg-1) ... Setting up libpipeline1:arm64 (1.5.1-2) ... Setting up lsb-base (10.2019051400) ... Setting up libkeyutils1:arm64 (1.6-6) ... Setting up libpsl5:arm64 (0.20.2-2) ... Setting up mime-support (3.62) ... Setting up libmagic-mgc (1:5.35-4+deb10u1) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:arm64 (2.58.3-2+deb10u2) ... No schema files found: doing nothing. Setting up libprocps7:arm64 (2:3.3.15-2) ... Setting up libnghttp2-14:arm64 (1.36.0-2+deb10u1) ... Setting up libmagic1:arm64 (1:5.35-4+deb10u1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4+deb10u1) ... Setting up libldap-common (2.4.47+dfsg-3+deb10u2) ... Setting up libicu63:arm64 (63.1-6+deb10u1) ... Setting up libkrb5support0:arm64 (1.17-3) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-1+deb10u1) ... Setting up autotools-dev (20180224.1) ... Setting up libuv1:arm64 (1.24.1-1) ... Setting up libexpat1-dev:arm64 (2.2.6-2+deb10u1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... Setting up libncurses6:arm64 (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:arm64 (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libk5crypto3:arm64 (1.17-3) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-1+deb10u1) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-1) ... Setting up sensible-utils (0.0.12) ... Setting up librhash0:arm64 (1.3.8-1) ... Setting up libuchardet0:arm64 (0.0.6-3) ... Setting up procps (2:3.3.15-2) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libssh2-1:arm64 (1.8.0-2.1) ... Setting up cmake-data (3.13.4-1) ... Setting up libkrb5-3:arm64 (1.17-3) ... Setting up libmpdec2:arm64 (2.4.2-2) ... Setting up libbsd0:arm64 (0.9.1-2) ... Setting up libelf1:arm64 (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Setting up libjsoncpp1:arm64 (1.7.4-3) ... Setting up libreadline7:arm64 (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libpython3.7-stdlib:arm64 (3.7.3-2+deb10u2) ... Setting up libtool (2.4.6-9) ... Setting up libarchive13:arm64 (3.3.3-4+deb10u1) ... Setting up libldap-2.4-2:arm64 (2.4.47+dfsg-3+deb10u2) ... Setting up m4 (1.4.18-2) ... Setting up libpython2.7-stdlib:arm64 (2.7.16-2+deb10u1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:arm64 (1.17-3) ... Setting up libcroco3:arm64 (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libcurl4:arm64 (7.64.0-4+deb10u1) ... Setting up libpython3-stdlib:arm64 (3.7.3-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.3-2+deb10u2) ... Setting up libpython2.7:arm64 (2.7.16-2+deb10u1) ... Setting up libpython2.7-dev:arm64 (2.7.16-2+deb10u1) ... Setting up gettext (0.19.8.1-9) ... Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libpython2-stdlib:arm64 (2.7.16-1) ... Setting up python3 (3.7.3-1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python2 (2.7.16-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython-stdlib:arm64 (2.7.16-1) ... Setting up cmake (3.13.4-1) ... Setting up libpython2-dev:arm64 (2.7.16-1) ... Setting up python3-lib2to3 (3.7.3-1) ... Setting up python (2.7.16-1) ... Setting up python2.7-dev (2.7.16-2+deb10u1) ... Setting up python3-distutils (3.7.3-1) ... Setting up dh-python (3.20190308) ... Setting up python2-dev (2.7.16-1) ... Setting up po-debconf (1.0.21) ... Setting up libpython-dev:arm64 (2.7.16-1) ... Setting up python-dev (2.7.16-1) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/kissplice-2.4.0-p1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package kissplice dpkg-buildpackage: info: source version 2.4.0-p1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --with python2 dh_clean debian/rules build dh build --with python2 dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/kissplice-2.4.0-p1' dh_auto_configure -- -DCMAKE_INSTALL_LIBEXECDIR=lib/ cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DCMAKE_INSTALL_LIBEXECDIR=lib/ .. -- The CXX compiler identification is GNU 8.3.0 -- The C compiler identification is GNU 8.3.0 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu make[1]: Leaving directory '/build/kissplice-2.4.0-p1' dh_auto_build cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/kissplice-2.4.0-p1 -B/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/CMakeFiles /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f debruijn-v4/CMakeFiles/ks_debruijn4.dir/build.make debruijn-v4/CMakeFiles/ks_debruijn4.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/debruijn-v4 /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4/CMakeFiles/ks_debruijn4.dir/DependInfo.cmake --color= make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/depend make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/thirdparty/kissreads/src /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/DependInfo.cmake --color= make -f modules/CMakeFiles/ks_clean_duplicates.dir/build.make modules/CMakeFiles/ks_clean_duplicates.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/thirdparty/kissreads/src /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/DependInfo.cmake --color= make -f modules/CMakeFiles/ks_run_modules.dir/build.make modules/CMakeFiles/ks_run_modules.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules/CMakeFiles/ks_clean_duplicates.dir/DependInfo.cmake --color= make -f modules/CMakeFiles/ks_bubble_enumeration.dir/build.make modules/CMakeFiles/ks_bubble_enumeration.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules/CMakeFiles/ks_run_modules.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules/CMakeFiles/ks_bubble_enumeration.dir/DependInfo.cmake --color= make -f modules/CMakeFiles/ks_print_bcc.dir/build.make modules/CMakeFiles/ks_print_bcc.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules/CMakeFiles/ks_print_bcc.dir/DependInfo.cmake --color= make -f modules/CMakeFiles/ks_error_removal.dir/build.make modules/CMakeFiles/ks_error_removal.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules/CMakeFiles/ks_error_removal.dir/DependInfo.cmake --color= Scanning dependencies of target ks_kissreadsSplice Scanning dependencies of target ks_kissreadsSNPS make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build Scanning dependencies of target ks_clean_duplicates Scanning dependencies of target ks_run_modules make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f modules/CMakeFiles/ks_clean_duplicates.dir/build.make modules/CMakeFiles/ks_clean_duplicates.dir/build make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' Scanning dependencies of target ks_bubble_enumeration make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' Scanning dependencies of target ks_print_bcc Scanning dependencies of target ks_debruijn4 make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build make -f modules/CMakeFiles/ks_run_modules.dir/build.make modules/CMakeFiles/ks_run_modules.dir/build make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' Scanning dependencies of target ks_error_removal make -f modules/CMakeFiles/ks_bubble_enumeration.dir/build.make modules/CMakeFiles/ks_bubble_enumeration.dir/build make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f debruijn-v4/CMakeFiles/ks_debruijn4.dir/build.make debruijn-v4/CMakeFiles/ks_debruijn4.dir/build make -f modules/CMakeFiles/ks_print_bcc.dir/build.make modules/CMakeFiles/ks_print_bcc.dir/build make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f modules/CMakeFiles/ks_error_removal.dir/build.make modules/CMakeFiles/ks_error_removal.dir/build make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [ 1%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/CleanDuplicates.cpp.o [ 2%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/main.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/main.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/main.cpp [ 3%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/BubbleEnumeration.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/CleanDuplicates.cpp.o -c /build/kissplice-2.4.0-p1/modules/CleanDuplicates.cpp [ 5%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o [ 6%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/commons.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/BubbleEnumeration.cpp.o -c /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.cpp [ 7%] Building CXX object modules/CMakeFiles/ks_print_bcc.dir/PrintBcc.cpp.o [ 8%] Building CXX object modules/CMakeFiles/ks_run_modules.dir/run.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/commons.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/commons.c cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/commons.c cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_run_modules.dir/run.cpp.o -c /build/kissplice-2.4.0-p1/modules/run.cpp cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_print_bcc.dir/PrintBcc.cpp.o -c /build/kissplice-2.4.0-p1/modules/PrintBcc.cpp [ 10%] Building CXX object modules/CMakeFiles/ks_error_removal.dir/ErrorRemoval.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_error_removal.dir/ErrorRemoval.cpp.o -c /build/kissplice-2.4.0-p1/modules/ErrorRemoval.cpp [ 11%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/extension_algorithm.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/extension_algorithm.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/extension_algorithm.c [ 12%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/extension_algorithm.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/extension_algorithm.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/extension_algorithm.c [ 13%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/interface_libchash.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/interface_libchash.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/interface_libchash.c [ 15%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/interface_libchash.c.o In file included from /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.cpp:61: /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.h:124:1: warning: 'typedef' was ignored in this declaration typedef struct Path { ^~~~~~~ cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/interface_libchash.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/interface_libchash.c In file included from /build/kissplice-2.4.0-p1/modules/PrintBcc.cpp:51: /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.h:124:1: warning: 'typedef' was ignored in this declaration typedef struct Path { ^~~~~~~ [ 16%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/libchash.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/libchash.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c In file included from /build/kissplice-2.4.0-p1/modules/PrintBcc.cpp:51: /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.h: In function 'bool read_edges_and_nodes_withoptimIO(char*, char*, char*, char*, char*, int*, TEdgeFunctor, TNodeFunctor&) [with TEdgeFunctor = Printer; TNodeFunctor = Printer]': /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.h:84:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(info_file, "%d \n",&bcc_size ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.h:85:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(info_file, "%d \n",&records_per_file ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/kissplice-2.4.0-p1/modules/PrintBcc.cpp:50: /build/kissplice-2.4.0-p1/modules/CGraph.h: In function 'bool read_node_noncontigous_file_withoptimIO(FILE*, FILE*, int*, int*, TFunctor&) [with TFunctor = Printer]': /build/kissplice-2.4.0-p1/modules/CGraph.h:252:68: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < *required_sequence+*file_index-2 ; i++) fgets(buffer, 100 * MAX, contents_file_node); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:253:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file_node, "%d \n",&written_lines_before ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:254:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file_node, "%d \n",&written_lines_for_record ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:265:58: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < written_lines_before ; i++) fgets(buffer, 100 * MAX, node_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/PrintBcc.cpp: In member function 'void Printer::operator()(FILE*, int)': /build/kissplice-2.4.0-p1/modules/PrintBcc.cpp:64:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(buffer, 100 * MAX, in_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/kissplice-2.4.0-p1/modules/PrintBcc.cpp:50: /build/kissplice-2.4.0-p1/modules/CGraph.h: In function 'void read_edge_file_withoptimIO(FILE*, FILE*, int*, int*, TFunctor&) [with TFunctor = Printer]': /build/kissplice-2.4.0-p1/modules/CGraph.h:330:68: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < *required_sequence+*file_index-2 ; i++) fgets(buffer, 100 * MAX, contents_file_edge); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:331:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file_edge, "%d \n",&written_lines_before ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:332:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file_edge, "%d \n",&written_lines_for_record ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:339:56: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < written_lines_before ; i++) fgets(buffer, 100 * MAX, edge_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/main.cpp: In function 'void construct_linear_seqs()': /build/kissplice-2.4.0-p1/debruijn-v4/main.cpp:105:55: warning: format '%lld' expects argument of type 'long long int', but argument 4 has type 'int64_t' {aka 'long int'} [-Wformat=] if ((NbBranchingKmer%300)==0) fprintf (stderr,"%cLooping through branching kmer n° %lld / %lld ",13,NbBranchingKmer,terminator->nb_branching_kmers); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/main.cpp:105:55: warning: format '%lld' expects argument of type 'long long int', but argument 5 has type 'int64_t' {aka 'long int'} [-Wformat=] /build/kissplice-2.4.0-p1/debruijn-v4/main.cpp: In function 'int main(int, char**)': /build/kissplice-2.4.0-p1/debruijn-v4/main.cpp:177:20: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=] printf("Max kmer size on this compiled version is %d\n",sizeof(kmer_type)*4-2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/main.cpp:206:15: warning: format '%lld' expects argument of type 'long long int', but argument 3 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] printf("estimated values: nbits Bloom %i, nb FP %lld, max memory %i MB\n",estimated_bloom_size,estimated_nb_FP,max_memory); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'HashFind': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:220:7: note: in expansion of macro 'READ_UL' READ_UL((ht)->fpData, cchData); \ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1221:4: note: in expansion of macro 'LOAD_AND_RETURN' LOAD_AND_RETURN(ht, Find(ht, KEY_TRUNC(ht, key), NULL)); ^~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'HashFindLast': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:220:7: note: in expansion of macro 'READ_UL' READ_UL((ht)->fpData, cchData); \ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1226:4: note: in expansion of macro 'LOAD_AND_RETURN' LOAD_AND_RETURN(ht, ht->posLastFind); ^~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'HashFirstBucket': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:220:7: note: in expansion of macro 'READ_UL' READ_UL((ht)->fpData, cchData); \ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1290:3: note: in expansion of macro 'LOAD_AND_RETURN' LOAD_AND_RETURN(ht, retval); ^~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'HashNextBucket': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:220:7: note: in expansion of macro 'READ_UL' READ_UL((ht)->fpData, cchData); \ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1300:3: note: in expansion of macro 'LOAD_AND_RETURN' LOAD_AND_RETURN(ht, retval); ^~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'HashDoLoad': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1407:4: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(szMagicKey, 1, 4, fp); ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1416:4: note: in expansion of macro 'READ_UL' READ_UL(fp, ht->cchKey); ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1417:4: note: in expansion of macro 'READ_UL' READ_UL(fp, ht->cItems); ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1418:4: note: in expansion of macro 'READ_UL' READ_UL(fp, ht->cDeletedItems); ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1421:4: note: in expansion of macro 'READ_UL' READ_UL(fp, cchKey); ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1423:4: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(rgchKeys, 1, cchKey, fp); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1428:7: note: in expansion of macro 'READ_UL' READ_UL(fp, bck->data); /* all we need if dataRead is NULL */ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'SparseRead': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:622:4: note: in expansion of macro 'READ_UL' READ_UL(fp, cBuckets); /* actually, cBuckets is stored */ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:627:3: note: in expansion of macro 'READ_UL' READ_UL(fp, (*pbinSparse)[i].bmOccupied[j]); ^~~~~~~ [ 17%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/libchash.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/libchash.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'HashFind': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:220:7: note: in expansion of macro 'READ_UL' READ_UL((ht)->fpData, cchData); \ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1221:4: note: in expansion of macro 'LOAD_AND_RETURN' LOAD_AND_RETURN(ht, Find(ht, KEY_TRUNC(ht, key), NULL)); ^~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'HashFindLast': [ 18%] Building CXX object modules/CMakeFiles/ks_print_bcc.dir/Utils.cpp.o /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:220:7: note: in expansion of macro 'READ_UL' READ_UL((ht)->fpData, cchData); \ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1226:4: note: in expansion of macro 'LOAD_AND_RETURN' LOAD_AND_RETURN(ht, ht->posLastFind); ^~~~~~~~~~~~~~~ cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_print_bcc.dir/Utils.cpp.o -c /build/kissplice-2.4.0-p1/modules/Utils.cpp /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'HashFirstBucket': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:220:7: note: in expansion of macro 'READ_UL' READ_UL((ht)->fpData, cchData); \ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1290:3: note: in expansion of macro 'LOAD_AND_RETURN' LOAD_AND_RETURN(ht, retval); ^~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'HashNextBucket': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:220:7: note: in expansion of macro 'READ_UL' READ_UL((ht)->fpData, cchData); \ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1300:3: note: in expansion of macro 'LOAD_AND_RETURN' LOAD_AND_RETURN(ht, retval); ^~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'HashDoLoad': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1407:4: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(szMagicKey, 1, 4, fp); ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1416:4: note: in expansion of macro 'READ_UL' READ_UL(fp, ht->cchKey); ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1417:4: note: in expansion of macro 'READ_UL' READ_UL(fp, ht->cItems); ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1418:4: note: in expansion of macro 'READ_UL' READ_UL(fp, ht->cDeletedItems); ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1421:4: note: in expansion of macro 'READ_UL' READ_UL(fp, cchKey); ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1423:4: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(rgchKeys, 1, cchKey, fp); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:1428:7: note: in expansion of macro 'READ_UL' READ_UL(fp, bck->data); /* all we need if dataRead is NULL */ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c: In function 'SparseRead': /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:622:4: note: in expansion of macro 'READ_UL' READ_UL(fp, cBuckets); /* actually, cBuckets is stored */ ^~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:193:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&_ul, sizeof(_ul), 1, (fp)); \ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/libchash.c:627:3: note: in expansion of macro 'READ_UL' READ_UL(fp, (*pbinSparse)[i].bmOccupied[j]); ^~~~~~~ [ 20%] Building CXX object modules/CMakeFiles/ks_run_modules.dir/CycleCompression.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_run_modules.dir/CycleCompression.cpp.o -c /build/kissplice-2.4.0-p1/modules/CycleCompression.cpp In file included from /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.cpp:61: /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.h: In function 'bool read_edges_and_nodes_withoptimIO(char*, char*, char*, char*, char*, int*, TEdgeFunctor, TNodeFunctor&) [with TEdgeFunctor = EdgeLoader; TNodeFunctor = NodeLoader]': /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.h:84:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(info_file, "%d \n",&bcc_size ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.h:85:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(info_file, "%d \n",&records_per_file ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/kissplice-2.4.0-p1/modules/BubbleEnumeration.cpp:60: /build/kissplice-2.4.0-p1/modules/CGraph.h: In function 'bool read_node_noncontigous_file_withoptimIO(FILE*, FILE*, int*, int*, TFunctor&) [with TFunctor = NodeLoader]': /build/kissplice-2.4.0-p1/modules/CGraph.h:252:68: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < *required_sequence+*file_index-2 ; i++) fgets(buffer, 100 * MAX, contents_file_node); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:253:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file_node, "%d \n",&written_lines_before ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:254:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file_node, "%d \n",&written_lines_for_record ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:265:58: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < written_lines_before ; i++) fgets(buffer, 100 * MAX, node_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h: In member function 'void NodeLoader::operator()(FILE*, int)': /build/kissplice-2.4.0-p1/modules/CGraph.h:215:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(buffer, 100 * MAX, node_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h: In function 'void read_edge_file_withoptimIO(FILE*, FILE*, int*, int*, TFunctor&) [with TFunctor = EdgeLoader]': /build/kissplice-2.4.0-p1/modules/CGraph.h:330:68: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < *required_sequence+*file_index-2 ; i++) fgets(buffer, 100 * MAX, contents_file_edge); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:331:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file_edge, "%d \n",&written_lines_before ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:332:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file_edge, "%d \n",&written_lines_for_record ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h:339:56: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < written_lines_before ; i++) fgets(buffer, 100 * MAX, edge_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/CGraph.h: In member function 'void EdgeLoader::operator()(FILE*, int)': /build/kissplice-2.4.0-p1/modules/CGraph.h:294:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(buffer, 100 * MAX, edge_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 21%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/Pool.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/Pool.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Pool.cpp [ 22%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/outputs.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/outputs.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/outputs.c [ 24%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/outputs.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/outputs.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/outputs.c [ 25%] Linking CXX executable ../lib/kissplice/ks_print_bcc cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/cmake -E cmake_link_script CMakeFiles/ks_print_bcc.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ks_print_bcc.dir/PrintBcc.cpp.o CMakeFiles/ks_print_bcc.dir/Utils.cpp.o -o ../lib/kissplice/ks_print_bcc [ 26%] Building CXX object modules/CMakeFiles/ks_error_removal.dir/CEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_error_removal.dir/CEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/CEdge.cpp make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [ 26%] Built target ks_print_bcc [ 27%] Building CXX object modules/CMakeFiles/ks_error_removal.dir/LabelledCEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_error_removal.dir/LabelledCEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/LabelledCEdge.cpp [ 29%] Building CXX object modules/CMakeFiles/ks_error_removal.dir/Utils.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_error_removal.dir/Utils.cpp.o -c /build/kissplice-2.4.0-p1/modules/Utils.cpp [ 30%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/Bank.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/Bank.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bank.cpp [ 31%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/coherent_algorithm.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/coherent_algorithm.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/coherent_algorithm.c [ 32%] Building CXX object modules/CMakeFiles/ks_run_modules.dir/NGraph.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_run_modules.dir/NGraph.cpp.o -c /build/kissplice-2.4.0-p1/modules/NGraph.cpp [ 34%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/couple.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/couple.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/couple.c [ 35%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/coherent_algorithm.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/coherent_algorithm.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/coherent_algorithm.c [ 36%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/couple.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/couple.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/couple.c [ 37%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/fragment_index.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/fragment_index.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/fragment_index.c [ 39%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/fragment_index.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/fragment_index.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/fragment_index.c [ 40%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/kissReads.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/kissReads.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/kissReads.c [ 41%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/list.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/list.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/list.c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bank.cpp: In member function 'void Bank::init(char**, int)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bank.cpp:279:19: warning: ignoring return value of 'char* strerror_r(int, char*, size_t)', declared with attribute warn_unused_result [-Wunused-result] strerror_r( errno, buffer, BUFSIZ ); // get string message from errno ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bank.cpp: In member function 'void BinaryBank::open(bool)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bank.cpp:710:19: warning: ignoring return value of 'char* strerror_r(int, char*, size_t)', declared with attribute warn_unused_result [-Wunused-result] strerror_r( errno, buffer, BUFSIZ ); // get string message from errno ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bank.cpp: In member function 'void BinaryReads::open(bool)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bank.cpp:795:19: warning: ignoring return value of 'char* strerror_r(int, char*, size_t)', declared with attribute warn_unused_result [-Wunused-result] strerror_r( errno, buffer, BUFSIZ ); // get string message from errno ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bank.cpp: In member function 'int KmersBuffer::readkmers()': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bank.cpp:985:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(buffer,sizeof( char),block_size, binary_read_file); // read a block of sequences into the buffer ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/kissReads.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/kissReads.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/kissReads.c [ 44%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/tree.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -DINPUT_FROM_KISSPLICE -o CMakeFiles/ks_kissreadsSplice.dir/tree.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/tree.c [ 45%] Linking CXX executable ../lib/kissplice/ks_error_removal cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/cmake -E cmake_link_script CMakeFiles/ks_error_removal.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ks_error_removal.dir/ErrorRemoval.cpp.o CMakeFiles/ks_error_removal.dir/CEdge.cpp.o CMakeFiles/ks_error_removal.dir/LabelledCEdge.cpp.o CMakeFiles/ks_error_removal.dir/Utils.cpp.o -o ../lib/kissplice/ks_error_removal [ 46%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/list.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/list.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/list.c [ 48%] Linking C executable ../../../lib/kissplice/ks_kissreadsSplice cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ks_kissreadsSplice.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [ 48%] Built target ks_error_removal /usr/bin/cc -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ks_kissreadsSplice.dir/commons.c.o CMakeFiles/ks_kissreadsSplice.dir/extension_algorithm.c.o CMakeFiles/ks_kissreadsSplice.dir/interface_libchash.c.o CMakeFiles/ks_kissreadsSplice.dir/libchash.c.o CMakeFiles/ks_kissreadsSplice.dir/outputs.c.o CMakeFiles/ks_kissreadsSplice.dir/coherent_algorithm.c.o CMakeFiles/ks_kissreadsSplice.dir/couple.c.o CMakeFiles/ks_kissreadsSplice.dir/fragment_index.c.o CMakeFiles/ks_kissreadsSplice.dir/kissReads.c.o CMakeFiles/ks_kissreadsSplice.dir/list.c.o CMakeFiles/ks_kissreadsSplice.dir/tree.c.o -o ../../../lib/kissplice/ks_kissreadsSplice -lm -lz [ 49%] Building C object thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cc -I/build/kissplice-2.4.0-p1/thirdparty/kissreads/include -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCLASSICAL_SPANNING -o CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o -c /build/kissplice-2.4.0-p1/thirdparty/kissreads/src/tree.c make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [ 49%] Built target ks_kissreadsSplice [ 50%] Building CXX object modules/CMakeFiles/ks_run_modules.dir/CGraph.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_run_modules.dir/CGraph.cpp.o -c /build/kissplice-2.4.0-p1/modules/CGraph.cpp [ 51%] Building CXX object modules/CMakeFiles/ks_run_modules.dir/CEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_run_modules.dir/CEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/CEdge.cpp [ 53%] Building CXX object modules/CMakeFiles/ks_run_modules.dir/LabelledCEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_run_modules.dir/LabelledCEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/LabelledCEdge.cpp [ 54%] Linking C executable ../../../lib/kissplice/ks_kissreadsSNPS cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ks_kissreadsSNPS.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ks_kissreadsSNPS.dir/commons.c.o CMakeFiles/ks_kissreadsSNPS.dir/extension_algorithm.c.o CMakeFiles/ks_kissreadsSNPS.dir/interface_libchash.c.o CMakeFiles/ks_kissreadsSNPS.dir/libchash.c.o CMakeFiles/ks_kissreadsSNPS.dir/outputs.c.o CMakeFiles/ks_kissreadsSNPS.dir/coherent_algorithm.c.o CMakeFiles/ks_kissreadsSNPS.dir/couple.c.o CMakeFiles/ks_kissreadsSNPS.dir/fragment_index.c.o CMakeFiles/ks_kissreadsSNPS.dir/kissReads.c.o CMakeFiles/ks_kissreadsSNPS.dir/list.c.o CMakeFiles/ks_kissreadsSNPS.dir/tree.c.o -o ../../../lib/kissplice/ks_kissreadsSNPS -lm -lz make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [ 54%] Built target ks_kissreadsSNPS [ 55%] Building CXX object modules/CMakeFiles/ks_run_modules.dir/NNode.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_run_modules.dir/NNode.cpp.o -c /build/kissplice-2.4.0-p1/modules/NNode.cpp [ 56%] Building CXX object modules/CMakeFiles/ks_run_modules.dir/NEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_run_modules.dir/NEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/NEdge.cpp [ 58%] Building CXX object modules/CMakeFiles/ks_run_modules.dir/SplitBcc.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_run_modules.dir/SplitBcc.cpp.o -c /build/kissplice-2.4.0-p1/modules/SplitBcc.cpp /build/kissplice-2.4.0-p1/modules/NGraph.cpp: In function 'void read_graph_edges_new(NGraph&, FILE*, FILE*, FILE*, int*, int*)': /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1050:68: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < *required_sequence+*file_index-2 ; i++) fgets(buffer, 100 * MAX, contents_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1051:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_before ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1052:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_for_record ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1061:56: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < written_lines_before ; i++) fgets(buffer, 100 * MAX, data_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1065:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(buffer, 100 * MAX, data_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp: In function 'void read_graph_nodes_new(NGraph&, FILE*, FILE*, FILE*, int*, int*)': /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1097:68: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < *required_sequence+*file_index-2 ; i++) fgets(buffer, 100 * MAX, contents_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1098:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_before ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1099:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_for_record ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1108:58: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < written_lines_before ; i++) { fgets(buffer, 100 * MAX, data_file); } ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1112:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(buffer, 100 * MAX, data_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 59%] Building CXX object modules/CMakeFiles/ks_run_modules.dir/Utils.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_run_modules.dir/Utils.cpp.o -c /build/kissplice-2.4.0-p1/modules/Utils.cpp [ 60%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/Bloom.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/Bloom.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bloom.cpp /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bloom.cpp: In member function 'void Bloom::load(char*)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bloom.cpp:256:9: warning: format '%lli' expects argument of type 'long long int', but argument 2 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] printf("loading bloom filter from file, nelem %lli \n",nchar); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~ [ 62%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/CycleCompression.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/CycleCompression.cpp.o -c /build/kissplice-2.4.0-p1/modules/CycleCompression.cpp /build/kissplice-2.4.0-p1/debruijn-v4/minia/Bloom.cpp:257:7: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(blooma, sizeof(unsigned char), nchar, file_data); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 63%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/NGraph.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/NGraph.cpp.o -c /build/kissplice-2.4.0-p1/modules/NGraph.cpp [ 64%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/Hash16.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/Hash16.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Hash16.cpp [ 65%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/Kmer.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/Kmer.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Kmer.cpp [ 67%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/Set.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/Set.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Set.cpp [ 68%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/Utils.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/Utils.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp: In function 'uint64_t extrapolate_distinct_kmers_wrapped(long unsigned int, Bank*)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp:434:112: warning: format '%lld' expects argument of type 'long long int', but argument 4 has type 'int64_t' {aka 'long int'} [-Wformat=] if ((NbRead%10000)==0) fprintf (stderr,(char*)"%cExtrapolating number of distinct kmers %lld",13,NbRead); ~~~~~~^ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp: In instantiation of 'Bloom* bloom_create_bloo1(T*, bool) [with T = BloomCpt]': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp:167:85: required from here /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp:121:16: warning: format '%lli' expects argument of type 'long long int', but argument 2 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] printf("load bloom from dump, containing %lli solid kmers b1_size %lli\n",nsolids,b1_size); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp:121:16: warning: format '%lli' expects argument of type 'long long int', but argument 3 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] /build/kissplice-2.4.0-p1/debruijn-v4/minia/Set.cpp: In member function 'void AssocPairedSet::load(char*)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Set.cpp:290:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&liste_value[0], sizeof(pair_nt_kmer_t), liste_value.size(), file_data); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp: In function 'void end_kmer_count_partition(bool, Hash16*)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp:187:14: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(F_kmercpt_write), 0); //erase previous file ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp:199:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cptk, sizeof(cptk), 1, F_kmercpt_read); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp:225:18: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(F_kmercpt_read), 0); //erase previous file ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/SortingCount.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/SortingCount.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/SortingCount.cpp /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp: In function 'char* return_file_name(const char*)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp:28:26: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] sprintf(fileName,"%s.%s",prefix,suffix); ^~~~~~~ In file included from /usr/include/stdio.h:873, from /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.h:1, from /build/kissplice-2.4.0-p1/debruijn-v4/minia/Utils.cpp:1: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output 2 or more bytes (assuming 1025) into a destination of size 1024 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 70%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/LinearCounter.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/LinearCounter.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/LinearCounter.cpp [ 72%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/CGraph.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/CGraph.cpp.o -c /build/kissplice-2.4.0-p1/modules/CGraph.cpp /build/kissplice-2.4.0-p1/modules/NGraph.cpp: In function 'void read_graph_edges_new(NGraph&, FILE*, FILE*, FILE*, int*, int*)': /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1050:68: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < *required_sequence+*file_index-2 ; i++) fgets(buffer, 100 * MAX, contents_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1051:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_before ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1052:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_for_record ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1061:56: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < written_lines_before ; i++) fgets(buffer, 100 * MAX, data_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1065:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(buffer, 100 * MAX, data_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp: In function 'void read_graph_nodes_new(NGraph&, FILE*, FILE*, FILE*, int*, int*)': /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1097:68: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < *required_sequence+*file_index-2 ; i++) fgets(buffer, 100 * MAX, contents_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1098:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_before ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1099:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_for_record ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1108:58: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < written_lines_before ; i++) { fgets(buffer, 100 * MAX, data_file); } ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1112:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(buffer, 100 * MAX, data_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 73%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/CycleCompression.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/CycleCompression.cpp.o -c /build/kissplice-2.4.0-p1/modules/CycleCompression.cpp [ 74%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/Debloom.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/Debloom.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp [ 75%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/Traversal.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/Traversal.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Traversal.cpp /build/kissplice-2.4.0-p1/debruijn-v4/minia/SortingCount.cpp: In function 'void sorting_count(Bank*, char*, int, int, bool, int, bool)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/SortingCount.cpp:56:15: warning: ignoring return value of 'char* getcwd(char*, size_t)', declared with attribute warn_unused_result [-Wunused-result] getcwd(current_path,sizeof(current_path)); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/SortingCount.cpp:283:15: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] system("echo 3 > /proc/sys/vm/drop_caches"); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/SortingCount.cpp:537:19: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] system("echo 3 > /proc/sys/vm/drop_caches"); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/Terminator.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/Terminator.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/Terminator.cpp /build/kissplice-2.4.0-p1/debruijn-v4/minia/SortingCount.cpp:45:24: warning: '%s' directive writing up to 1023 bytes into a region of size 512 [-Wformat-overflow=] sprintf(p_buf, "%s/%s", temp_dir, ep->d_name); ^~~~~~~ ~~~~~~~~ In file included from /usr/include/stdio.h:873, from /build/kissplice-2.4.0-p1/debruijn-v4/minia/SortingCount.h:1, from /build/kissplice-2.4.0-p1/debruijn-v4/minia/SortingCount.cpp:1: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 2 and 1280 bytes into a destination of size 512 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp: In function 'int debloom(int, int)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:154:53: warning: format '%lld' expects argument of type 'long long int', but argument 4 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] if ((NbSolidKmer%10000)==0) fprintf (stderr,"%c Writing positive Bloom Kmers %lld",13,NbSolidKmer); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:158:20: warning: format '%lli' expects argument of type 'long long int', but argument 3 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] fprintf(stderr,"\n%lli kmers written\n",cc); ^~~~~~~~~~~~~~~~~~~~~~~~ ~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:191:53: warning: format '%lld' expects argument of type 'long long int', but argument 4 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] if ((NbSolidKmer%10000)==0) fprintf (stderr,"%cBuild Hash table %lld",13,NbSolidKmer); ^~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:195:28: warning: format '%lli' expects argument of type 'long long int', but argument 3 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] fprintf(stderr,"End of debloom partition %lli / %lld \n",hasht1->nb_elem,max_kmer_per_part); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:195:28: warning: format '%lld' expects argument of type 'long long int', but argument 4 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:208:28: warning: format '%lli' expects argument of type 'long long int', but argument 3 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] fprintf(stderr,"\n%lli false positives written , partition %i \n",n_false_positives,numpart); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:225:20: warning: format '%lli' expects argument of type 'long long int', but argument 3 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] fprintf(stderr,"Total nb false positives stored in the Debloom hashtable %lli \n",n_false_positives); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp: In function 'Set* load_false_positives()': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:280:133: warning: format '%lld' expects argument of type 'long long int', but argument 4 has type 'int64_t' {aka 'long int'} [-Wformat=] if ((NbInsertedKmers%10000)==0) fprintf (stderr,(char*)"%cInsert false positive Kmers in hash table %lld",13,NbInsertedKmers); ~~~~~~~~~~~~~~~^ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:284:21: warning: format '%lld' expects argument of type 'long long int', but argument 3 has type 'int64_t' {aka 'long int'} [-Wformat=] fprintf (stderr,"\nInserted %lld false positive kmers in the hash structure.\n\n",NbInsertedKmers); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp: In function 'void print_size_summary(FPSet*)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:445:19: warning: format '%lli' expects argument of type 'long long int', but argument 3 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] fprintf(stderr, "Size of the FP table : %lli FP x %d bits = %.2lf MB \n", fp->capacity(), bits_per_FP_element, toMB((double)(size_T1)) ); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:448:18: warning: format '%lld' expects argument of type 'long long int', but argument 4 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] fprintf(stderr," Total %.2lf MB for %lld solid kmers ==> %.2lf bits / solid kmer\n\n", toMB(total_size), nbkmers_solid, total_size / nbkmers_solid); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp: In function 'void print_size_summary(FPSetCascading4*)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:465:18: warning: format '%lld' expects argument of type 'long long int', but argument 4 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] fprintf(stderr," Total %.2lf MB for %lld solid kmers ==> %.2lf bits / solid kmer\n\n", toMB(total_size), nbkmers_solid, total_size / nbkmers_solid); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp: In function 'void end_debloom_partition(bool)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Debloom.cpp:29:11: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(F_debloom_write), 0); //erase previous file ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/NGraph.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/NGraph.cpp.o -c /build/kissplice-2.4.0-p1/modules/NGraph.cpp /build/kissplice-2.4.0-p1/debruijn-v4/minia/Terminator.cpp: In constructor 'BranchingTerminator::BranchingTerminator(BinaryBank*, uint64_t, Bloom*, Set*)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Terminator.cpp:275:29: warning: format '%lld' expects argument of type 'long long int', but argument 5 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] fprintf (stderr,"%cExtrapolating the number of branching kmers from the first %dM kmers: %lld",13,(int)ceilf(nb_extrapolation/1024.0/1024.0),estimated_nb_branching_kmers); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Terminator.cpp:303:58: warning: format '%lld' expects argument of type 'long long int', but argument 4 has type 'int64_t' {aka 'long int'} [-Wformat=] if ((nb_branching_kmers%500)==0) fprintf (stderr,"%cIndexing branching kmers %lld / ~%lld",13,nb_branching_kmers,estimated_nb_branching_kmers); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/Terminator.cpp:303:58: warning: format '%lld' expects argument of type 'long long int', but argument 5 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=] /build/kissplice-2.4.0-p1/debruijn-v4/minia/Terminator.cpp: In constructor 'BranchingTerminator::BranchingTerminator(BinaryBank*, BinaryBank*, Bloom*, Set*)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/Terminator.cpp:337:25: warning: format '%lld' expects argument of type 'long long int', but argument 3 has type 'int64_t' {aka 'long int'} [-Wformat=] fprintf (stderr,"\nLoaded %lld branching kmers x %lu B = %.1f MB\n",nb_branching_kmers,sizeof(cell),((1<)*1.0)/1024.0/1024.0); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/CEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/CEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/CEdge.cpp [ 81%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/OAHash.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/OAHash.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/OAHash.cpp [ 82%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/minia/GraphOutput.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/c++ -Dkmer_type=__uint128_t -I/build/kissplice-2.4.0-p1/debruijn-v4 -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_debruijn4.dir/minia/GraphOutput.cpp.o -c /build/kissplice-2.4.0-p1/debruijn-v4/minia/GraphOutput.cpp [ 83%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/LabelledCEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/LabelledCEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/LabelledCEdge.cpp [ 84%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/NNode.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/NNode.cpp.o -c /build/kissplice-2.4.0-p1/modules/NNode.cpp [ 86%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/NEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/NEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/NEdge.cpp [ 87%] Building CXX object modules/CMakeFiles/ks_clean_duplicates.dir/Utils.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/Utils.cpp.o -c /build/kissplice-2.4.0-p1/modules/Utils.cpp /build/kissplice-2.4.0-p1/debruijn-v4/minia/GraphOutput.cpp: In constructor 'GraphOutput::GraphOutput(std::__cxx11::string, int, std::id_els)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/GraphOutput.cpp:61:10: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] printf("graph_format=%d first_id_nodes=%d first_id_edges=%d\n", graph_format, first_id_els.node, first_id_els.edge); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/GraphOutput.cpp:61:10: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] /build/kissplice-2.4.0-p1/debruijn-v4/minia/GraphOutput.cpp: In constructor 'GraphOutput::GraphOutput(std::__cxx11::string, int)': /build/kissplice-2.4.0-p1/debruijn-v4/minia/GraphOutput.cpp:73:10: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] printf("graph_format=%d first_id_nodes=%d first_id_edges=%d\n", graph_format, first_id_els.node, first_id_els.edge); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/debruijn-v4/minia/GraphOutput.cpp:73:10: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] /build/kissplice-2.4.0-p1/debruijn-v4/minia/GraphOutput.cpp: In member function 'void GraphOutput::close()': /build/kissplice-2.4.0-p1/debruijn-v4/minia/GraphOutput.cpp:108:49: warning: format '%s' expects a matching 'char*' argument [-Wformat=] if(!edges || !nodes){fprintf(stderr,"Cannot open file %s, %s or %s, exit\n", json_edges_file_suffix.c_str(), json_nodes_file_suffix.c_str()); exit(1);} ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/CGraph.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/CGraph.cpp.o -c /build/kissplice-2.4.0-p1/modules/CGraph.cpp /build/kissplice-2.4.0-p1/modules/NGraph.cpp: In function 'void read_graph_edges_new(NGraph&, FILE*, FILE*, FILE*, int*, int*)': /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1050:68: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < *required_sequence+*file_index-2 ; i++) fgets(buffer, 100 * MAX, contents_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1051:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_before ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1052:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_for_record ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1061:56: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < written_lines_before ; i++) fgets(buffer, 100 * MAX, data_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1065:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(buffer, 100 * MAX, data_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp: In function 'void read_graph_nodes_new(NGraph&, FILE*, FILE*, FILE*, int*, int*)': /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1097:68: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < *required_sequence+*file_index-2 ; i++) fgets(buffer, 100 * MAX, contents_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1098:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_before ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1099:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(contents_file, "%d \n",&written_lines_for_record ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1108:58: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] for (int i = 0; i < written_lines_before ; i++) { fgets(buffer, 100 * MAX, data_file); } ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/kissplice-2.4.0-p1/modules/NGraph.cpp:1112:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(buffer, 100 * MAX, data_file); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/CEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/CEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/CEdge.cpp [ 91%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/LabelledCEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/LabelledCEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/LabelledCEdge.cpp [ 92%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/NNode.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/NNode.cpp.o -c /build/kissplice-2.4.0-p1/modules/NNode.cpp [ 93%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/NEdge.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/NEdge.cpp.o -c /build/kissplice-2.4.0-p1/modules/NEdge.cpp [ 94%] Linking CXX executable ../lib/kissplice/ks_run_modules cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/cmake -E cmake_link_script CMakeFiles/ks_run_modules.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ks_run_modules.dir/run.cpp.o CMakeFiles/ks_run_modules.dir/CycleCompression.cpp.o CMakeFiles/ks_run_modules.dir/NGraph.cpp.o CMakeFiles/ks_run_modules.dir/CGraph.cpp.o CMakeFiles/ks_run_modules.dir/CEdge.cpp.o CMakeFiles/ks_run_modules.dir/LabelledCEdge.cpp.o CMakeFiles/ks_run_modules.dir/NNode.cpp.o CMakeFiles/ks_run_modules.dir/NEdge.cpp.o CMakeFiles/ks_run_modules.dir/SplitBcc.cpp.o CMakeFiles/ks_run_modules.dir/Utils.cpp.o -o ../lib/kissplice/ks_run_modules make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [ 94%] Built target ks_run_modules [ 96%] Building CXX object modules/CMakeFiles/ks_bubble_enumeration.dir/Utils.cpp.o cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/c++ -I/build/kissplice-2.4.0-p1/modules -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/ks_bubble_enumeration.dir/Utils.cpp.o -c /build/kissplice-2.4.0-p1/modules/Utils.cpp [ 97%] Linking CXX executable ../lib/kissplice/ks_debruijn4 cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ks_debruijn4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ks_debruijn4.dir/main.cpp.o CMakeFiles/ks_debruijn4.dir/minia/Pool.cpp.o CMakeFiles/ks_debruijn4.dir/minia/Bank.cpp.o CMakeFiles/ks_debruijn4.dir/minia/Bloom.cpp.o CMakeFiles/ks_debruijn4.dir/minia/Hash16.cpp.o CMakeFiles/ks_debruijn4.dir/minia/Kmer.cpp.o CMakeFiles/ks_debruijn4.dir/minia/Set.cpp.o CMakeFiles/ks_debruijn4.dir/minia/Utils.cpp.o CMakeFiles/ks_debruijn4.dir/minia/SortingCount.cpp.o CMakeFiles/ks_debruijn4.dir/minia/LinearCounter.cpp.o CMakeFiles/ks_debruijn4.dir/minia/Debloom.cpp.o CMakeFiles/ks_debruijn4.dir/minia/Traversal.cpp.o CMakeFiles/ks_debruijn4.dir/minia/Terminator.cpp.o CMakeFiles/ks_debruijn4.dir/minia/OAHash.cpp.o CMakeFiles/ks_debruijn4.dir/minia/GraphOutput.cpp.o -o ../lib/kissplice/ks_debruijn4 -lz make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [ 97%] Built target ks_debruijn4 [ 98%] Linking CXX executable ../lib/kissplice/ks_clean_duplicates cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/cmake -E cmake_link_script CMakeFiles/ks_clean_duplicates.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ks_clean_duplicates.dir/CleanDuplicates.cpp.o CMakeFiles/ks_clean_duplicates.dir/CycleCompression.cpp.o CMakeFiles/ks_clean_duplicates.dir/NGraph.cpp.o CMakeFiles/ks_clean_duplicates.dir/CGraph.cpp.o CMakeFiles/ks_clean_duplicates.dir/CEdge.cpp.o CMakeFiles/ks_clean_duplicates.dir/LabelledCEdge.cpp.o CMakeFiles/ks_clean_duplicates.dir/NNode.cpp.o CMakeFiles/ks_clean_duplicates.dir/NEdge.cpp.o CMakeFiles/ks_clean_duplicates.dir/Utils.cpp.o -o ../lib/kissplice/ks_clean_duplicates make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [ 98%] Built target ks_clean_duplicates [100%] Linking CXX executable ../lib/kissplice/ks_bubble_enumeration cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules && /usr/bin/cmake -E cmake_link_script CMakeFiles/ks_bubble_enumeration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/kissplice-2.4.0-p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ks_bubble_enumeration.dir/BubbleEnumeration.cpp.o CMakeFiles/ks_bubble_enumeration.dir/CycleCompression.cpp.o CMakeFiles/ks_bubble_enumeration.dir/NGraph.cpp.o CMakeFiles/ks_bubble_enumeration.dir/CGraph.cpp.o CMakeFiles/ks_bubble_enumeration.dir/CEdge.cpp.o CMakeFiles/ks_bubble_enumeration.dir/LabelledCEdge.cpp.o CMakeFiles/ks_bubble_enumeration.dir/NNode.cpp.o CMakeFiles/ks_bubble_enumeration.dir/NEdge.cpp.o CMakeFiles/ks_bubble_enumeration.dir/Utils.cpp.o -o ../lib/kissplice/ks_bubble_enumeration make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [100%] Built target ks_bubble_enumeration make[2]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' dh_auto_test cd obj-aarch64-linux-gnu && make -j8 test ARGS\+=-j8 make[1]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process -j8 Test project /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu Start 1: KisspliceBasicTest Start 2: KisspliceDBGTest Start 3: KisspliceTwoSequencesTest Start 4: KisspliceGraphAndSequenceTest Start 5: KisspliceGraphTest Start 6: ksBubbleEnumerationTest Start 7: ksRunModulesTest Start 8: ksErrorRemovalTest 1/8 Test #6: ksBubbleEnumerationTest .......... Passed 0.27 sec 2/8 Test #7: ksRunModulesTest ................. Passed 0.28 sec 3/8 Test #1: KisspliceBasicTest ............... Passed 0.48 sec 4/8 Test #8: ksErrorRemovalTest ............... Passed 0.42 sec 5/8 Test #5: KisspliceGraphTest ............... Passed 4.47 sec 6/8 Test #4: KisspliceGraphAndSequenceTest .... Passed 6.04 sec 7/8 Test #3: KisspliceTwoSequencesTest ........ Passed 36.29 sec 8/8 Test #2: KisspliceDBGTest ................. Passed 46.20 sec 100% tests passed, 0 tests failed out of 8 Total Test time (real) = 46.21 sec make[1]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python2 dh_testroot dh_prep dh_auto_install cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/kissplice-2.4.0-p1/debian/kissplice AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/kissplice-2.4.0-p1 -B/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/CMakeFiles /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f debruijn-v4/CMakeFiles/ks_debruijn4.dir/build.make debruijn-v4/CMakeFiles/ks_debruijn4.dir/depend make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/debruijn-v4 /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4 /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/debruijn-v4/CMakeFiles/ks_debruijn4.dir/DependInfo.cmake --color= make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/thirdparty/kissreads/src /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/DependInfo.cmake --color= make -f modules/CMakeFiles/ks_clean_duplicates.dir/build.make modules/CMakeFiles/ks_clean_duplicates.dir/depend make -f modules/CMakeFiles/ks_run_modules.dir/build.make modules/CMakeFiles/ks_run_modules.dir/depend make -f modules/CMakeFiles/ks_bubble_enumeration.dir/build.make modules/CMakeFiles/ks_bubble_enumeration.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/thirdparty/kissreads/src /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules/CMakeFiles/ks_clean_duplicates.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules/CMakeFiles/ks_run_modules.dir/DependInfo.cmake --color= make -f modules/CMakeFiles/ks_print_bcc.dir/build.make modules/CMakeFiles/ks_print_bcc.dir/depend make -f modules/CMakeFiles/ks_error_removal.dir/build.make modules/CMakeFiles/ks_error_removal.dir/depend make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules/CMakeFiles/ks_bubble_enumeration.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules/CMakeFiles/ks_print_bcc.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' cd /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/kissplice-2.4.0-p1 /build/kissplice-2.4.0-p1/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/modules/CMakeFiles/ks_error_removal.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f modules/CMakeFiles/ks_error_removal.dir/build.make modules/CMakeFiles/ks_error_removal.dir/build make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f modules/CMakeFiles/ks_print_bcc.dir/build.make modules/CMakeFiles/ks_print_bcc.dir/build make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build make -f thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build.make thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f modules/CMakeFiles/ks_clean_duplicates.dir/build.make modules/CMakeFiles/ks_clean_duplicates.dir/build make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f modules/CMakeFiles/ks_run_modules.dir/build.make modules/CMakeFiles/ks_run_modules.dir/build make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f modules/CMakeFiles/ks_bubble_enumeration.dir/build.make modules/CMakeFiles/ks_bubble_enumeration.dir/build make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make -f debruijn-v4/CMakeFiles/ks_debruijn4.dir/build.make debruijn-v4/CMakeFiles/ks_debruijn4.dir/build make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'modules/CMakeFiles/ks_error_removal.dir/build'. make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'modules/CMakeFiles/ks_print_bcc.dir/build'. make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [ 6%] Built target ks_error_removal [ 10%] Built target ks_print_bcc make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'modules/CMakeFiles/ks_clean_duplicates.dir/build'. make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build'. make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSNPS.dir/build'. make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'modules/CMakeFiles/ks_bubble_enumeration.dir/build'. make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'modules/CMakeFiles/ks_run_modules.dir/build'. make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'debruijn-v4/CMakeFiles/ks_debruijn4.dir/build'. make[3]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' [ 25%] Built target ks_kissreadsSplice [ 37%] Built target ks_clean_duplicates [ 50%] Built target ks_bubble_enumeration [ 64%] Built target ks_run_modules [ 79%] Built target ks_kissreadsSNPS [100%] Built target ks_debruijn4 make[2]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/bin/kissplice -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/lib/kissplice/ks_debruijn4 -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/lib/kissplice/ks_kissreadsSNPS -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/lib/kissplice/ks_kissreadsSplice -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/lib/kissplice/ks_clean_duplicates -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/lib/kissplice/ks_bubble_enumeration -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/lib/kissplice/ks_run_modules -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/lib/kissplice/ks_error_removal -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/lib/kissplice/ks_print_bcc -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/share/man/man1/kissplice.1 -- Installing: /build/kissplice-2.4.0-p1/debian/kissplice/usr/share/doc/kissplice/user_guide.pdf make[1]: Leaving directory '/build/kissplice-2.4.0-p1/obj-aarch64-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/build/kissplice-2.4.0-p1' mkdir -p debian/kissplice/usr/share/kissplice mv debian/kissplice/usr/bin/kissplice debian/kissplice/usr/share/kissplice/kissplice.py make[1]: Leaving directory '/build/kissplice-2.4.0-p1' dh_installdocs dh_installchangelogs dh_installman dh_python2 I: dh_python2 tools:114: replacing shebang in debian/kissplice/usr/share/kissplice/kissplice.py dh_perl dh_link dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/build/kissplice-2.4.0-p1' dh_compress --exclude=.pdf make[1]: Leaving directory '/build/kissplice-2.4.0-p1' dh_fixperms dh_missing dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'kissplice' in '../kissplice_2.4.0-p1-4_arm64.deb'. dpkg-deb: building package 'kissplice-dbgsym' in '../kissplice-dbgsym_2.4.0-p1-4_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../kissplice_2.4.0-p1-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/31873 and its subdirectories I: Current time: Mon Sep 13 01:57:59 -12 2021 I: pbuilder-time-stamp: 1631541479 Tue Aug 11 07:35:03 UTC 2020 I: 1st build successful. Starting 2nd build on remote node codethink-sled10-arm64.debian.net. Tue Aug 11 07:35:03 UTC 2020 I: Preparing to do remote build '2' on codethink-sled10-arm64.debian.net. Tue Aug 11 07:38:19 UTC 2020 I: Deleting $TMPDIR on codethink-sled10-arm64.debian.net. Tue Aug 11 07:38:20 UTC 2020 I: kissplice_2.4.0-p1-4_arm64.changes: Format: 1.8 Date: Tue, 08 Jan 2019 12:48:29 +0100 Source: kissplice Binary: kissplice kissplice-dbgsym Architecture: arm64 Version: 2.4.0-p1-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: kissplice - Detection of various kinds of polymorphisms in RNA-seq data Changes: kissplice (2.4.0-p1-4) unstable; urgency=medium . [ Jelmer Vernooij ] * Use secure copyright file specification URI. . [ Andreas Tille ] * Point Vcs fields to salsa.debian.org * Standards-Version: 4.3.0 Checksums-Sha1: ccf80d0eab56d43a6c2e430b0866d71f327b486d 2950028 kissplice-dbgsym_2.4.0-p1-4_arm64.deb bdd714336fc5dfe509e6a206cbc139b985b7b588 6704 kissplice_2.4.0-p1-4_arm64.buildinfo 0c1c2a1f34943fd0b339a16d3e75ce626538b0a4 773484 kissplice_2.4.0-p1-4_arm64.deb Checksums-Sha256: f3c6d0c368ce4b1dc43865d79e39bd5bd92079d839a1a2ef5cfcac3840555cc2 2950028 kissplice-dbgsym_2.4.0-p1-4_arm64.deb 70ecb56e563d22b811a663e409892181567f7572c623c785e2cf6e7adc3d7f39 6704 kissplice_2.4.0-p1-4_arm64.buildinfo 73fec9478da29bb3cd1a4181ffe3d403435e281530731a56b02936b84d59b4ef 773484 kissplice_2.4.0-p1-4_arm64.deb Files: 94fdc6fb3ad905701062e05f4dcb457b 2950028 debug optional kissplice-dbgsym_2.4.0-p1-4_arm64.deb 59d3e0d7dfff2fef1ca57707559041e9 6704 science optional kissplice_2.4.0-p1-4_arm64.buildinfo 57535677f59b1d3d39f091d9a2f212c5 773484 science optional kissplice_2.4.0-p1-4_arm64.deb Tue Aug 11 07:38:21 UTC 2020 I: diffoscope 155 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.KhEgvVl9Jm/kissplice_2.4.0-p1-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.KhEgvVl9Jm/kissplice_2.4.0-p1-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.KhEgvVl9Jm/kissplice_2.4.0-p1-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.KhEgvVl9Jm/b1/kissplice_2.4.0-p1-4_arm64.changes /srv/reproducible-results/rbuild-debian/tmp.KhEgvVl9Jm/b2/kissplice_2.4.0-p1-4_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.215s) 0.215s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.052s) 0.052s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Tue Aug 11 07:38:22 UTC 2020 I: diffoscope 155 found no differences in the changes files, and a .buildinfo file also exists. Tue Aug 11 07:38:22 UTC 2020 I: kissplice from buster built successfully and reproducibly on arm64. Tue Aug 11 07:38:23 UTC 2020 I: Submitting .buildinfo files to external archives: Tue Aug 11 07:38:23 UTC 2020 I: Submitting 8.0K b1/kissplice_2.4.0-p1-4_arm64.buildinfo.asc Tue Aug 11 07:38:24 UTC 2020 I: Submitting 8.0K b2/kissplice_2.4.0-p1-4_arm64.buildinfo.asc Tue Aug 11 07:38:26 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Aug 11 07:38:26 UTC 2020 I: Done submitting .buildinfo files. Tue Aug 11 07:38:26 UTC 2020 I: Removing signed kissplice_2.4.0-p1-4_arm64.buildinfo.asc files: removed './b1/kissplice_2.4.0-p1-4_arm64.buildinfo.asc' removed './b2/kissplice_2.4.0-p1-4_arm64.buildinfo.asc'