Fri Aug 7 14:28:31 UTC 2020 I: starting to build libtabixpp/buster/arm64 on jenkins on '2020-08-07 14:28' Fri Aug 7 14:28:31 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_22/4809/console.log Fri Aug 7 14:28:31 UTC 2020 I: Downloading source for buster/libtabixpp=1.0.0-4 --2020-08-07 14:28:32-- http://deb.debian.org/debian/pool/main/libt/libtabixpp/libtabixpp_1.0.0-4.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2145 (2.1K) Saving to: ‘libtabixpp_1.0.0-4.dsc’ 0K .. 100% 13.6M=0s 2020-08-07 14:28:32 (13.6 MB/s) - ‘libtabixpp_1.0.0-4.dsc’ saved [2145/2145] Fri Aug 7 14:28:32 UTC 2020 I: libtabixpp_1.0.0-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libtabixpp Binary: libtabixpp0, libtabixpp-dev Architecture: any Version: 1.0.0-4 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Sascha Steinbiss Homepage: https://github.com/ekg/tabixpp Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/libtabixpp Vcs-Git: https://salsa.debian.org/med-team/libtabixpp.git Testsuite: autopkgtest Testsuite-Triggers: build-essential, tabix Build-Depends: debhelper (>= 11~), libhts-dev, zlib1g-dev, d-shlibs Package-List: libtabixpp-dev deb libdevel optional arch=any libtabixpp0 deb libs optional arch=any Checksums-Sha1: 5e504c4ac4f47af2cc57d89585e313a5648aacc9 3519 libtabixpp_1.0.0.orig.tar.gz d8355142b74ca23b4f7d1dc03a99f20689bf134b 46784 libtabixpp_1.0.0-4.debian.tar.xz Checksums-Sha256: 96ef482042cf71f48f8c84b068195f417d6b51a85c4428d98674537cf47c14e8 3519 libtabixpp_1.0.0.orig.tar.gz e0f1473bce385dad5c8da47dc1dde7d8d1dea3d7838b0fbdc6a8da1d264e8a6f 46784 libtabixpp_1.0.0-4.debian.tar.xz Files: ec59a2abc12095bcde39fc79f84d30a1 3519 libtabixpp_1.0.0.orig.tar.gz d4a9e8ac60ab59ef7ef9bf23b9e64ed9 46784 libtabixpp_1.0.0-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAluaALkRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEkZw/9H60W44MTnoCO70nmngHcRzO78qsNFKwO mDhN+9mfQAqRrgf5qT5jLaxd7dxdhyNnPa7S2izNAZK+RwKheJSblfQjxsOa41QK GNgQid9H2QHdDTZMcqYjqiF+SLuo70bjqp+wGWEAU1FKi/mKAe9H1xprBNodA31o OUMDo5LgCTvPVGUkgxNVRj9oKvU+RX4F+Ed4EgeEMOQJq2vQoZ7cEtQAr0fVKqJB UFLNax97GXttqAsRrWqWbzp7LWfKCRG3cmnrB9XgB9y9aYDGr0JtULZ9Od58MWCG 9HT0VAUJnhNXsEG2XZd3CbY3FHz0V7yS28Ikvgwg6cZ/hIvdAC+dxRaADveDor8O ISKPNyse1PYhqBiAwr6r1jhp6am0d39wG7biDTEXNwXEQsAeRqYPw14kB0MKQVr+ RJBHXyBwNtwGSR/HyoQhd6iYnWNyq7CRsKqqbXZX8genU+sorTmNqpjVPiea9Ikb NO2PvNfMem8JgZcYHtnhp0ktY7Kpv0jXC+MbPyr8XhpjvupOhb3jLY/zWGa75mqa 7gSSWwfFTxYoqr6qtuNG16pomkqc/8vCXtp5iqdSk3c1tHlMnxM27rkWFApfSPvk plWL+R9NHTtd/vgZo/mbgchQr+CmY3PwtoBLtdpCJ+ucM/2yi9MgawWhlfgCPKzV 2iCR8oAPmHc= =G+4u -----END PGP SIGNATURE----- Fri Aug 7 14:28:32 UTC 2020 I: Checking whether the package is not for us Fri Aug 7 14:28:32 UTC 2020 I: Starting 1st build on remote node codethink-sled14-arm64.debian.net. Fri Aug 7 14:28:32 UTC 2020 I: Preparing to do remote build '1' on codethink-sled14-arm64.debian.net. Fri Aug 7 14:29:25 UTC 2020 I: Deleting $TMPDIR on codethink-sled14-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Aug 7 02:28:45 -12 2020 I: pbuilder-time-stamp: 1596810525 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libtabixpp_1.0.0-4.dsc] I: copying [./libtabixpp_1.0.0.orig.tar.gz] I: copying [./libtabixpp_1.0.0-4.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/var/lib/jenkins/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Sep 12 18:16:25 2018 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libtabixpp_1.0.0-4.dsc dpkg-source: info: extracting libtabixpp in libtabixpp-1.0.0 dpkg-source: info: unpacking libtabixpp_1.0.0.orig.tar.gz dpkg-source: info: unpacking libtabixpp_1.0.0-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying build_shared_lib_with_debian_htslib.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/20012/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='20012' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.H6aFZC1IKB/pbuilderrc_mXiC --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.H6aFZC1IKB/b1 --logfile b1/build.log libtabixpp_1.0.0-4.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink-sled14-arm64 4.4.0-186-generic #216-Ubuntu SMP Wed Jul 1 05:35:21 UTC 2020 aarch64 GNU/Linux I: ls -l /bin total 4928 -rwxr-xr-x 1 root root 1216928 Apr 17 2019 bash -rwxr-xr-x 3 root root 34808 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14264 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 35576 Feb 28 2019 cat -rwxr-xr-x 1 root root 60256 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 56096 Feb 28 2019 chmod -rwxr-xr-x 1 root root 64368 Feb 28 2019 chown -rwxr-xr-x 1 root root 134632 Feb 28 2019 cp -rwxr-xr-x 1 root root 129536 Jan 17 2019 dash -rwxr-xr-x 1 root root 97136 Feb 28 2019 date -rwxr-xr-x 1 root root 76736 Feb 28 2019 dd -rwxr-xr-x 1 root root 93752 Feb 28 2019 df -rwxr-xr-x 1 root root 138848 Feb 28 2019 dir -rwxr-xr-x 1 root root 75984 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 31368 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 27256 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68792 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34824 Apr 22 07:38 fusermount -rwxr-xr-x 1 root root 174304 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 89656 Jan 5 2019 gzip -rwxr-xr-x 1 root root 18440 Sep 26 2018 hostname -rwxr-xr-x 1 root root 64472 Feb 28 2019 ln -rwxr-xr-x 1 root root 52544 Jul 26 2018 login -rwxr-xr-x 1 root root 138848 Feb 28 2019 ls -rwxr-xr-x 1 root root 108552 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 76840 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 64480 Feb 28 2019 mknod -rwxr-xr-x 1 root root 39736 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 38840 Jan 9 2019 more -rwsr-xr-x 1 root root 47112 Jan 9 2019 mount -rwxr-xr-x 1 root root 14344 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138736 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35560 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 43712 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68440 Feb 28 2019 rm -rwxr-xr-x 1 root root 39624 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 19144 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 6 20:25 sh -> dash -rwxr-xr-x 1 root root 31384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 72480 Feb 28 2019 stty -rwsr-xr-x 1 root root 59424 Jan 9 2019 su -rwxr-xr-x 1 root root 31416 Feb 28 2019 sync -rwxr-xr-x 1 root root 449416 Apr 23 2019 tar -rwxr-xr-x 1 root root 10560 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 88968 Feb 28 2019 touch -rwxr-xr-x 1 root root 27256 Feb 28 2019 true -rwxr-xr-x 1 root root 14264 Apr 22 07:38 ulockmgr_server -rwsr-xr-x 1 root root 30728 Jan 9 2019 umount -rwxr-xr-x 1 root root 31384 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138848 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34824 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/20012/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), libhts-dev, zlib1g-dev, d-shlibs dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libhts-dev; however: Package libhts-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs; however: Package d-shlibs is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libcroco3{a} libcurl3-gnutls{a} libdeflate0{a} libelf1{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libgssapi-krb5-2{a} libhts-dev{a} libhts2{a} libicu63{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.4-2{a} libldap-common{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnghttp2-14{a} libpipeline1{a} libpsl5{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libssl1.1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix shared-mime-info wget xdg-user-dirs 0 packages upgraded, 54 newly installed, 0 to remove and 0 not upgraded. Need to get 26.9 MB of archives. After unpacking 84.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main arm64 libbsd0 arm64 0.9.1-2 [97.4 kB] Get: 2 http://deb.debian.org/debian buster/main arm64 bsdmainutils arm64 11.1.2+b1 [185 kB] Get: 3 http://deb.debian.org/debian buster/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get: 4 http://deb.debian.org/debian buster/main arm64 groff-base arm64 1.22.4-3 [869 kB] Get: 5 http://deb.debian.org/debian buster/main arm64 libpipeline1 arm64 1.5.1-2 [29.8 kB] Get: 6 http://deb.debian.org/debian buster/main arm64 man-db arm64 2.8.5-2 [1258 kB] Get: 7 http://deb.debian.org/debian buster/main arm64 sensible-utils all 0.0.12 [15.8 kB] Get: 8 http://deb.debian.org/debian buster/main arm64 libmagic-mgc arm64 1:5.35-4+deb10u1 [242 kB] Get: 9 http://deb.debian.org/debian buster/main arm64 libmagic1 arm64 1:5.35-4+deb10u1 [115 kB] Get: 10 http://deb.debian.org/debian buster/main arm64 file arm64 1:5.35-4+deb10u1 [66.4 kB] Get: 11 http://deb.debian.org/debian buster/main arm64 gettext-base arm64 0.19.8.1-9 [120 kB] Get: 12 http://deb.debian.org/debian buster/main arm64 libsigsegv2 arm64 2.12-2 [32.3 kB] Get: 13 http://deb.debian.org/debian buster/main arm64 m4 arm64 1.4.18-2 [198 kB] Get: 14 http://deb.debian.org/debian buster/main arm64 autoconf all 2.69-11 [341 kB] Get: 15 http://deb.debian.org/debian buster/main arm64 autotools-dev all 20180224.1 [77.0 kB] Get: 16 http://deb.debian.org/debian buster/main arm64 automake all 1:1.16.1-4 [771 kB] Get: 17 http://deb.debian.org/debian buster/main arm64 autopoint all 0.19.8.1-9 [434 kB] Get: 18 http://deb.debian.org/debian buster/main arm64 d-shlibs all 0.84 [17.2 kB] Get: 19 http://deb.debian.org/debian buster/main arm64 libtool all 2.4.6-9 [547 kB] Get: 20 http://deb.debian.org/debian buster/main arm64 dh-autoreconf all 19 [16.9 kB] Get: 21 http://deb.debian.org/debian buster/main arm64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 22 http://deb.debian.org/debian buster/main arm64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 23 http://deb.debian.org/debian buster/main arm64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 24 http://deb.debian.org/debian buster/main arm64 libelf1 arm64 0.176-1.1 [160 kB] Get: 25 http://deb.debian.org/debian buster/main arm64 dwz arm64 0.12-3 [71.7 kB] Get: 26 http://deb.debian.org/debian buster/main arm64 libglib2.0-0 arm64 2.58.3-2+deb10u2 [1185 kB] Get: 27 http://deb.debian.org/debian buster/main arm64 libicu63 arm64 63.1-6+deb10u1 [8151 kB] Get: 28 http://deb.debian.org/debian buster/main arm64 libxml2 arm64 2.9.4+dfsg1-7+b3 [623 kB] Get: 29 http://deb.debian.org/debian buster/main arm64 libcroco3 arm64 0.6.12-3 [140 kB] Get: 30 http://deb.debian.org/debian buster/main arm64 libncurses6 arm64 6.1+20181013-2+deb10u2 [92.6 kB] Get: 31 http://deb.debian.org/debian buster/main arm64 gettext arm64 0.19.8.1-9 [1261 kB] Get: 32 http://deb.debian.org/debian buster/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 33 http://deb.debian.org/debian buster/main arm64 po-debconf all 1.0.21 [248 kB] Get: 34 http://deb.debian.org/debian buster/main arm64 debhelper all 12.1.1 [1016 kB] Get: 35 http://deb.debian.org/debian buster/main arm64 libkeyutils1 arm64 1.6-6 [14.9 kB] Get: 36 http://deb.debian.org/debian buster/main arm64 libkrb5support0 arm64 1.17-3 [64.7 kB] Get: 37 http://deb.debian.org/debian buster/main arm64 libk5crypto3 arm64 1.17-3 [122 kB] Get: 38 http://deb.debian.org/debian buster/main arm64 libssl1.1 arm64 1.1.1d-0+deb10u3 [1382 kB] Get: 39 http://deb.debian.org/debian buster/main arm64 libkrb5-3 arm64 1.17-3 [353 kB] Get: 40 http://deb.debian.org/debian buster/main arm64 libgssapi-krb5-2 arm64 1.17-3 [150 kB] Get: 41 http://deb.debian.org/debian buster/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-1+deb10u1 [69.3 kB] Get: 42 http://deb.debian.org/debian buster/main arm64 libsasl2-2 arm64 2.1.27+dfsg-1+deb10u1 [105 kB] Get: 43 http://deb.debian.org/debian buster/main arm64 libldap-common all 2.4.47+dfsg-3+deb10u2 [89.7 kB] Get: 44 http://deb.debian.org/debian buster/main arm64 libldap-2.4-2 arm64 2.4.47+dfsg-3+deb10u2 [216 kB] Get: 45 http://deb.debian.org/debian buster/main arm64 libnghttp2-14 arm64 1.36.0-2+deb10u1 [81.9 kB] Get: 46 http://deb.debian.org/debian buster/main arm64 libpsl5 arm64 0.20.2-2 [53.6 kB] Get: 47 http://deb.debian.org/debian buster/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2 [55.7 kB] Get: 48 http://deb.debian.org/debian buster/main arm64 libssh2-1 arm64 1.8.0-2.1 [135 kB] Get: 49 http://deb.debian.org/debian buster/main arm64 libcurl3-gnutls arm64 7.64.0-4+deb10u1 [310 kB] Get: 50 http://deb.debian.org/debian buster/main arm64 libdeflate0 arm64 1.2-1 [51.4 kB] Get: 51 http://deb.debian.org/debian buster/main arm64 libhts2 arm64 1.9-11 [277 kB] Get: 52 http://deb.debian.org/debian buster/main arm64 liblzma-dev arm64 5.2.4-1 [209 kB] Get: 53 http://deb.debian.org/debian buster/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-1 [210 kB] Get: 54 http://deb.debian.org/debian buster/main arm64 libhts-dev arm64 1.9-11 [4338 kB] Fetched 26.9 MB in 2s (10.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_arm64.deb ... Unpacking libbsd0:arm64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_arm64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../02-libuchardet0_0.0.6-3_arm64.deb ... 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Setting up libssh2-1:arm64 (1.8.0-2.1) ... Setting up libkrb5-3:arm64 (1.17-3) ... Setting up libbsd0:arm64 (0.9.1-2) ... Setting up libelf1:arm64 (0.176-1.1) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libtool (2.4.6-9) ... Setting up libldap-2.4-2:arm64 (2.4.47+dfsg-3+deb10u2) ... Setting up m4 (1.4.18-2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:arm64 (1.17-3) ... Setting up libcroco3:arm64 (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up libcurl3-gnutls:arm64 (7.64.0-4+deb10u1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libhts2:arm64 (1.9-11) ... Setting up po-debconf (1.0.21) ... Setting up libhts-dev:arm64 (1.9-11) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/libtabixpp-1.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package libtabixpp dpkg-buildpackage: info: source version 1.0.0-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean dh_auto_clean make -j8 clean make[1]: Entering directory '/build/libtabixpp-1.0.0' rm -fr gmon.out *.o a.out *.dSYM tabix++ *~ *.a tabix.aux tabix.log \ tabix.pdf *.class libtabix*.dylib libtabix*so* #cd htslib && make clean make[1]: Leaving directory '/build/libtabixpp-1.0.0' dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j8 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/libtabixpp-1.0.0' g++ -g -O2 -ffile-prefix-map=/build/libtabixpp-1.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c tabix.cpp -Ihtslib tabix.cpp: In constructor 'Tabix::Tabix(std::__cxx11::string&)': tabix.cpp:12:32: warning: 'int bgzf_is_bgzf(const char*)' is deprecated: Use bgzf_compression() or hts_detect_format() instead [-Wdeprecated-declarations] if ( bgzf_is_bgzf(cfilename)!=1 ) ^ In file included from tabix.hpp:4, from tabix.cpp:1: /usr/include/htslib/bgzf.h:243:9: note: declared here int bgzf_is_bgzf(const char *fn) HTS_DEPRECATED("Use bgzf_compression() or hts_detect_format() instead"); ^~~~~~~~~~~~ tabix.cpp:12:32: warning: 'int bgzf_is_bgzf(const char*)' is deprecated: Use bgzf_compression() or hts_detect_format() instead [-Wdeprecated-declarations] if ( bgzf_is_bgzf(cfilename)!=1 ) ^ In file included from tabix.hpp:4, from tabix.cpp:1: /usr/include/htslib/bgzf.h:243:9: note: declared here int bgzf_is_bgzf(const char *fn) HTS_DEPRECATED("Use bgzf_compression() or hts_detect_format() instead"); ^~~~~~~~~~~~ g++ -g -O2 -ffile-prefix-map=/build/libtabixpp-1.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -o tabix++ main.cpp tabix.o -Ihtslib -L. -Lhtslib \ -lhts -lpthread -lm -lz g++ -shared -o libtabixpp.so.0 tabix.o -fPIC -Wl,-soname,libtabixpp.so.0 -Wl,-z,relro -Wl,-z,now -lhts ar rcs libtabixpp.a tabix.o make[1]: Leaving directory '/build/libtabixpp-1.0.0' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/libtabixpp-1.0.0' ln -s libtabixpp.so.* libtabixpp.so d-shlibmove --commit \ --multiarch \ --devunversioned \ --override s/libhts[12]-dev/libhts-dev/ \ --movedev "*.hpp" usr/include/ \ libtabixpp.so Library package automatic movement utility --> libhts-dev package exists. set -e install -d -m 755 debian/libtabixpp-dev/usr/lib/aarch64-linux-gnu install -d -m 755 debian/libtabixpp0/usr/lib/aarch64-linux-gnu mv ./libtabixpp.a debian/libtabixpp-dev/usr/lib/aarch64-linux-gnu mv ./libtabixpp.la debian/libtabixpp-dev/usr/lib/aarch64-linux-gnu || true mv ./libtabixpp.so debian/libtabixpp-dev/usr/lib/aarch64-linux-gnu mv /build/libtabixpp-1.0.0/libtabixpp.so.0 debian/libtabixpp0/usr/lib/aarch64-linux-gnu PKGDEV=libtabixpp-dev PKGSHL=libtabixpp0 install -d -m 755 debian/libtabixpp-dev/usr/include/ mv *.hpp debian/libtabixpp-dev/usr/include/ mv: cannot stat './libtabixpp.la': No such file or directory make[1]: Leaving directory '/build/libtabixpp-1.0.0' dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package libtabixpp-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package libtabixpp-dev: substitution variable ${devlibs:Depends} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'libtabixpp0-dbgsym' in '../libtabixpp0-dbgsym_1.0.0-4_arm64.deb'. dpkg-deb: building package 'libtabixpp-dev' in '../libtabixpp-dev_1.0.0-4_arm64.deb'. dpkg-deb: building package 'libtabixpp0' in '../libtabixpp0_1.0.0-4_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libtabixpp_1.0.0-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/20012 and its subdirectories I: Current time: Fri Aug 7 02:29:24 -12 2020 I: pbuilder-time-stamp: 1596810564 Fri Aug 7 14:29:26 UTC 2020 I: 1st build successful. Starting 2nd build on remote node codethink-sled11-arm64.debian.net. Fri Aug 7 14:29:26 UTC 2020 I: Preparing to do remote build '2' on codethink-sled11-arm64.debian.net. Fri Aug 7 14:30:42 UTC 2020 I: Deleting $TMPDIR on codethink-sled11-arm64.debian.net. Fri Aug 7 14:30:43 UTC 2020 I: libtabixpp_1.0.0-4_arm64.changes: Format: 1.8 Date: Thu, 13 Sep 2018 07:56:39 +0200 Source: libtabixpp Binary: libtabixpp-dev libtabixpp0 libtabixpp0-dbgsym Architecture: arm64 Version: 1.0.0-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libtabixpp-dev - C++ wrapper to tabix indexer (development files) libtabixpp0 - C++ wrapper to tabix indexer Changes: libtabixpp (1.0.0-4) unstable; urgency=medium . * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.2.1 * Drop obsolete -dbg package Checksums-Sha1: bbe92472c89f6c366c6f87914a97cc51dfc61f38 7152 libtabixpp-dev_1.0.0-4_arm64.deb d8cf354805cef4520d6d1aec1ebf164e5ab51ea2 56896 libtabixpp0-dbgsym_1.0.0-4_arm64.deb 94de478ec4ba59ae0c77057c368e81c3efbf4c88 7532 libtabixpp0_1.0.0-4_arm64.deb ee91fe15a5e4e55d42615eb19b23b0209f3180aa 5989 libtabixpp_1.0.0-4_arm64.buildinfo Checksums-Sha256: 0aca2d8e5cf2e0222e6c553e7c22a23bdb696df8cb35f8fe9ee0c56faa9e6699 7152 libtabixpp-dev_1.0.0-4_arm64.deb fc51de0907a11f23f7243a4b6fab609ce06617bb4cd06546cd64173d37561d0b 56896 libtabixpp0-dbgsym_1.0.0-4_arm64.deb 12d6c60bb44ab5d17be84ff41511dd59281c915dba719e2f8490f635d2506dc4 7532 libtabixpp0_1.0.0-4_arm64.deb c0cbfe1df169c127b2024f071ab33540e8095ab638eb3981c34f5e16b94b78ed 5989 libtabixpp_1.0.0-4_arm64.buildinfo Files: 0db9a4b5714006e4019f71449ca7cf7e 7152 libdevel optional libtabixpp-dev_1.0.0-4_arm64.deb 86d59d6758127cc2033b9fcef67f184a 56896 debug optional libtabixpp0-dbgsym_1.0.0-4_arm64.deb dabd527fb390e765da86be25e73c090c 7532 libs optional libtabixpp0_1.0.0-4_arm64.deb 63252cbb53b984ae7881dd9c958e2394 5989 science optional libtabixpp_1.0.0-4_arm64.buildinfo Fri Aug 7 14:30:44 UTC 2020 I: diffoscope 154 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.H6aFZC1IKB/libtabixpp_1.0.0-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.H6aFZC1IKB/libtabixpp_1.0.0-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.H6aFZC1IKB/libtabixpp_1.0.0-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.H6aFZC1IKB/b1/libtabixpp_1.0.0-4_arm64.changes /srv/reproducible-results/rbuild-debian/tmp.H6aFZC1IKB/b2/libtabixpp_1.0.0-4_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.237s) 0.237s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.024s) 0.024s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Fri Aug 7 14:30:45 UTC 2020 I: diffoscope 154 found no differences in the changes files, and a .buildinfo file also exists. Fri Aug 7 14:30:45 UTC 2020 I: libtabixpp from buster built successfully and reproducibly on arm64. Fri Aug 7 14:30:47 UTC 2020 I: Submitting .buildinfo files to external archives: Fri Aug 7 14:30:47 UTC 2020 I: Submitting 8.0K b1/libtabixpp_1.0.0-4_arm64.buildinfo.asc Fri Aug 7 14:30:47 UTC 2020 I: Submitting 8.0K b2/libtabixpp_1.0.0-4_arm64.buildinfo.asc Fri Aug 7 14:30:48 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Aug 7 14:30:48 UTC 2020 I: Done submitting .buildinfo files. Fri Aug 7 14:30:48 UTC 2020 I: Removing signed libtabixpp_1.0.0-4_arm64.buildinfo.asc files: removed './b1/libtabixpp_1.0.0-4_arm64.buildinfo.asc' removed './b2/libtabixpp_1.0.0-4_arm64.buildinfo.asc'