Mon Jun 15 06:38:06 UTC 2020 I: starting to build libchado-perl/buster/armhf on jenkins on '2020-06-15 06:37'
Mon Jun 15 06:38:06 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_17/411/console.log
Mon Jun 15 06:38:06 UTC 2020 I: Downloading source for buster/libchado-perl=1.31-5
--2020-06-15 06:38:06-- http://deb.debian.org/debian/pool/main/libc/libchado-perl/libchado-perl_1.31-5.dsc
Connecting to 78.137.99.97:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 2543 (2.5K)
Saving to: ‘libchado-perl_1.31-5.dsc’
0K .. 100% 104M=0s
2020-06-15 06:38:06 (104 MB/s) - ‘libchado-perl_1.31-5.dsc’ saved [2543/2543]
Mon Jun 15 06:38:06 UTC 2020 I: libchado-perl_1.31-5.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 3.0 (quilt)
Source: libchado-perl
Binary: libchado-perl, chado-utils
Architecture: all
Version: 1.31-5
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Scott Cain <scain@cpan.org>, Steffen Moeller <moeller@debian.org>, Olivier Sallou <osallou@debian.org>, Andreas Tille <tille@debian.org>
Homepage: http://gmod.org/wiki/Chado
Standards-Version: 4.2.1
Vcs-Browser: https://salsa.debian.org/med-team/libchado-perl
Vcs-Git: https://salsa.debian.org/med-team/libchado-perl.git
Build-Depends: debhelper (>= 11~)
Build-Depends-Indep: perl, libclass-dbi-pg-perl, libxml-libxslt-perl, liblog-log4perl-perl, bioperl, libgo-perl, libdbd-pg-perl, libdbi-perl, libgd-gd2-perl, libdigest-md5-file-perl, libgraph-perl, libdata-stag-perl, libxml-perl, libclass-dbi-perl, libclass-dbi-pager-perl, libxml-simple-perl, libwww-perl, libtemplate-perl, libcgi-session-perl, libsql-translator-perl, libdbix-dbstag-perl, libmodule-build-perl
Package-List:
chado-utils deb perl optional arch=all
libchado-perl deb perl optional arch=all
Checksums-Sha1:
47de881786d4f1a86264ca9ce9ad5d05650d7aa9 5051094 libchado-perl_1.31.orig.tar.gz
3095cdcfb5775a2abe1b67c72973211fa807f572 14544 libchado-perl_1.31-5.debian.tar.xz
Checksums-Sha256:
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ceea9e8e3d57d9d5bc33ff5635b3d75eccc25b97eb0a62dc11aa9f60d714caa1 14544 libchado-perl_1.31-5.debian.tar.xz
Files:
a4748b03324185eea185b2391b94e36a 5051094 libchado-perl_1.31.orig.tar.gz
8cfd2d4647dfcc7aadb873603e21a784 14544 libchado-perl_1.31-5.debian.tar.xz
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Mon Jun 15 06:38:06 UTC 2020 I: Checking whether the package is not for us
Mon Jun 15 06:38:06 UTC 2020 I: Starting 1st build on remote node jtx1b-armhf-rb.debian.net.
Mon Jun 15 06:38:06 UTC 2020 I: Preparing to do remote build '1' on jtx1b-armhf-rb.debian.net.
Mon Jun 15 06:43:33 UTC 2020 I: Deleting $TMPDIR on jtx1b-armhf-rb.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Sun Jun 14 18:38:15 -12 2020
I: pbuilder-time-stamp: 1592203095
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz]
I: copying local configuration
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [libchado-perl_1.31-5.dsc]
I: copying [./libchado-perl_1.31.orig.tar.gz]
I: copying [./libchado-perl_1.31-5.debian.tar.xz]
I: Extracting source
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Sep 27 06:53:26 2018 -12
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libchado-perl_1.31-5.dsc
dpkg-source: info: extracting libchado-perl in libchado-perl-1.31
dpkg-source: info: unpacking libchado-perl_1.31.orig.tar.gz
dpkg-source: info: unpacking libchado-perl_1.31-5.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fix_perl_headers
dpkg-source: info: applying force_SIMPLE
dpkg-source: info: applying fix_spelling_manpage
dpkg-source: info: applying fix_manpages
dpkg-source: info: applying setBinPathForBuilder
dpkg-source: info: applying remove_pl_extension.patch
dpkg-source: info: applying 0001-Sort-generated-build.conf-for-reproducibility.patch
dpkg-source: info: applying 0001-Sort-installed-configuration-file-for-reproducibilit.patch
I: using fakeroot in build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/13802/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='armhf'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3'
DISTRIBUTION=''
HOME='/root'
HOST_ARCH='armhf'
IFS='
'
INVOCATION_ID='aac9314d948e4ea6a86a8a30574d39b0'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='13802'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.P9p6jQ05kv/pbuilderrc_QblE --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.P9p6jQ05kv/b1 --logfile b1/build.log libchado-perl_1.31-5.dsc'
SUDO_GID='114'
SUDO_UID='110'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://10.0.0.15:8000/'
I: uname -a
Linux jtx1b 4.19.0-9-arm64 #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) aarch64 GNU/Linux
I: ls -l /bin
total 3328
-rwxr-xr-x 1 root root 767656 Apr 17 2019 bash
-rwxr-xr-x 3 root root 26052 Jul 10 2019 bunzip2
-rwxr-xr-x 3 root root 26052 Jul 10 2019 bzcat
lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff
-rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff
lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep
-rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe
lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep
-rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep
-rwxr-xr-x 3 root root 26052 Jul 10 2019 bzip2
-rwxr-xr-x 1 root root 9636 Jul 10 2019 bzip2recover
lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore
-rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore
-rwxr-xr-x 1 root root 22432 Feb 28 2019 cat
-rwxr-xr-x 1 root root 38868 Feb 28 2019 chgrp
-rwxr-xr-x 1 root root 38836 Feb 28 2019 chmod
-rwxr-xr-x 1 root root 42972 Feb 28 2019 chown
-rwxr-xr-x 1 root root 88376 Feb 28 2019 cp
-rwxr-xr-x 1 root root 75516 Jan 17 2019 dash
-rwxr-xr-x 1 root root 71648 Feb 28 2019 date
-rwxr-xr-x 1 root root 51212 Feb 28 2019 dd
-rwxr-xr-x 1 root root 55672 Feb 28 2019 df
-rwxr-xr-x 1 root root 88444 Feb 28 2019 dir
-rwxr-xr-x 1 root root 54872 Jan 9 2019 dmesg
lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname
lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname
-rwxr-xr-x 1 root root 22364 Feb 28 2019 echo
-rwxr-xr-x 1 root root 28 Jan 7 2019 egrep
-rwxr-xr-x 1 root root 18260 Feb 28 2019 false
-rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep
-rwxr-xr-x 1 root root 47356 Jan 9 2019 findmnt
-rwsr-xr-x 1 root root 21980 Apr 22 07:38 fusermount
-rwxr-xr-x 1 root root 124508 Jan 7 2019 grep
-rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip
-rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe
-rwxr-xr-x 1 root root 64232 Jan 5 2019 gzip
-rwxr-xr-x 1 root root 13784 Sep 26 2018 hostname
-rwxr-xr-x 1 root root 43044 Feb 28 2019 ln
-rwxr-xr-x 1 root root 34932 Jul 26 2018 login
-rwxr-xr-x 1 root root 88444 Feb 28 2019 ls
-rwxr-xr-x 1 root root 67036 Jan 9 2019 lsblk
-rwxr-xr-x 1 root root 47168 Feb 28 2019 mkdir
-rwxr-xr-x 1 root root 43040 Feb 28 2019 mknod
-rwxr-xr-x 1 root root 26552 Feb 28 2019 mktemp
-rwxr-xr-x 1 root root 26024 Jan 9 2019 more
-rwsr-xr-x 1 root root 34268 Jan 9 2019 mount
-rwxr-xr-x 1 root root 9688 Jan 9 2019 mountpoint
-rwxr-xr-x 1 root root 84284 Feb 28 2019 mv
lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname
lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5
-rwxr-xr-x 1 root root 22416 Feb 28 2019 pwd
lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash
-rwxr-xr-x 1 root root 26504 Feb 28 2019 readlink
-rwxr-xr-x 1 root root 42968 Feb 28 2019 rm
-rwxr-xr-x 1 root root 26496 Feb 28 2019 rmdir
-rwxr-xr-x 1 root root 14136 Jan 21 2019 run-parts
-rwxr-xr-x 1 root root 76012 Dec 22 2018 sed
lrwxrwxrwx 1 root root 4 Jun 12 20:25 sh -> dash
-rwxr-xr-x 1 root root 22384 Feb 28 2019 sleep
-rwxr-xr-x 1 root root 51124 Feb 28 2019 stty
-rwsr-xr-x 1 root root 42472 Jan 9 2019 su
-rwxr-xr-x 1 root root 22392 Feb 28 2019 sync
-rwxr-xr-x 1 root root 283324 Apr 23 2019 tar
-rwxr-xr-x 1 root root 9808 Jan 21 2019 tempfile
-rwxr-xr-x 1 root root 63464 Feb 28 2019 touch
-rwxr-xr-x 1 root root 18260 Feb 28 2019 true
-rwxr-xr-x 1 root root 9636 Apr 22 07:38 ulockmgr_server
-rwsr-xr-x 1 root root 21976 Jan 9 2019 umount
-rwxr-xr-x 1 root root 22380 Feb 28 2019 uname
-rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress
-rwxr-xr-x 1 root root 88444 Feb 28 2019 vdir
-rwxr-xr-x 1 root root 21980 Jan 9 2019 wdctl
-rwxr-xr-x 1 root root 946 Jan 21 2019 which
lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname
-rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat
-rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp
-rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff
-rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep
-rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep
-rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce
-rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep
-rwxr-xr-x 1 root root 2205 Jan 5 2019 zless
-rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore
-rwxr-xr-x 1 root root 4552 Jan 5 2019 znew
I: user script /srv/workspace/pbuilder/13802/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: armhf
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper (>= 11~), perl, libclass-dbi-pg-perl, libxml-libxslt-perl, liblog-log4perl-perl, bioperl, libgo-perl, libdbd-pg-perl, libdbi-perl, libgd-gd2-perl, libdigest-md5-file-perl, libgraph-perl, libdata-stag-perl, libxml-perl, libclass-dbi-perl, libclass-dbi-pager-perl, libxml-simple-perl, libwww-perl, libtemplate-perl, libcgi-session-perl, libsql-translator-perl, libdbix-dbstag-perl, libmodule-build-perl
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 18932 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however:
Package debhelper is not installed.
pbuilder-satisfydepends-dummy depends on libclass-dbi-pg-perl; however:
Package libclass-dbi-pg-perl is not installed.
pbuilder-satisfydepends-dummy depends on libxml-libxslt-perl; however:
Package libxml-libxslt-perl is not installed.
pbuilder-satisfydepends-dummy depends on liblog-log4perl-perl; however:
Package liblog-log4perl-perl is not installed.
pbuilder-satisfydepends-dummy depends on bioperl; however:
Package bioperl is not installed.
pbuilder-satisfydepends-dummy depends on libgo-perl; however:
Package libgo-perl is not installed.
pbuilder-satisfydepends-dummy depends on libdbd-pg-perl; however:
Package libdbd-pg-perl is not installed.
pbuilder-satisfydepends-dummy depends on libdbi-perl; however:
Package libdbi-perl is not installed.
pbuilder-satisfydepends-dummy depends on libgd-gd2-perl; however:
Package libgd-gd2-perl is not installed.
pbuilder-satisfydepends-dummy depends on libdigest-md5-file-perl; however:
Package libdigest-md5-file-perl is not installed.
pbuilder-satisfydepends-dummy depends on libgraph-perl; however:
Package libgraph-perl is not installed.
pbuilder-satisfydepends-dummy depends on libdata-stag-perl; however:
Package libdata-stag-perl is not installed.
pbuilder-satisfydepends-dummy depends on libxml-perl; however:
Package libxml-perl is not installed.
pbuilder-satisfydepends-dummy depends on libclass-dbi-perl; however:
Package libclass-dbi-perl is not installed.
pbuilder-satisfydepends-dummy depends on libclass-dbi-pager-perl; however:
Package libclass-dbi-pager-perl is not installed.
pbuilder-satisfydepends-dummy depends on libxml-simple-perl; however:
Package libxml-simple-perl is not installed.
pbuilder-satisfydepends-dummy depends on libwww-perl; however:
Package libwww-perl is not installed.
pbuilder-satisfydepends-dummy depends on libtemplate-perl; however:
Package libtemplate-perl is not installed.
pbuilder-satisfydepends-dummy depends on libcgi-session-perl; however:
Package libcgi-session-perl is not installed.
pbuilder-satisfydepends-dummy depends on libsql-translator-perl; however:
Package libsql-translator-perl is not installed.
pbuilder-satisfydepends-dummy depends on libdbix-dbstag-perl; however:
Package libdbix-dbstag-perl is not installed.
pbuilder-satisfydepends-dummy depends on libmodule-build-perl; however:
Package libmodule-build-perl is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bioperl{a} bsdmainutils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libappconfig-perl{a} libarchive-zip-perl{a} libb-hooks-op-check-perl{a} libbio-perl-perl{a} libbsd0{a} libcairo2{a} libcapture-tiny-perl{a} libcarp-clan-perl{a} libcdt5{a} libcgi-pm-perl{a} libcgi-session-perl{a} libcgraph6{a} libclass-accessor-chained-perl{a} libclass-accessor-perl{a} libclass-data-inheritable-perl{a} libclass-dbi-pager-perl{a} libclass-dbi-perl{a} libclass-dbi-pg-perl{a} libclass-inspector-perl{a} libclass-makemethods-perl{a} libclass-method-modifiers-perl{a} libclass-trigger-perl{a} libclone-perl{a} libcroco3{a} libdata-page-perl{a} libdata-stag-perl{a} libdatrie1{a} libdbd-pg-perl{a} libdbi-perl{a} libdbix-contextualfetch-perl{a} libdbix-dbschema-perl{a} libdbix-dbstag-perl{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-stacktrace-perl{a} libdigest-md5-file-perl{a} libdynaloader-functions-perl{a} libelf1{a} libencode-locale-perl{a} libexception-class-perl{a} libexpat1{a} libexporter-lite-perl{a} libfile-listing-perl{a} libfile-sharedir-perl{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfreezethaw-perl{a} libfribidi0{a} libgd-perl{a} libgd3{a} libglib2.0-0{a} libgo-perl{a} libgraph-perl{a} libgraphite2-3{a} libgraphviz-perl{a} libgssapi-krb5-2{a} libgts-0.7-5{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libice6{a} libicu63{a} libima-dbi-perl{a} libimport-into-perl{a} libio-html-perl{a} libio-pty-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} libio-stringy-perl{a} libipc-run-perl{a} libjbig0{a} libjpeg62-turbo{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} libldap-2.4-2{a} libldap-common{a} liblog-log4perl-perl{a} libltdl7{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1{a} libmodule-build-perl{a} libmodule-runtime-perl{a} libmoo-perl{a} libncurses6{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpackage-variant-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libparams-classify-perl{a} libparse-recdescent-perl{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libpq5{a} librole-tiny-perl{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libsm6{a} libsql-translator-perl{a} libssl1.1{a} libstrictures-perl{a} libsub-exporter-progressive-perl{a} libsub-name-perl{a} libsub-quote-perl{a} libsub-uplevel-perl{a} libtemplate-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libthai-data{a} libthai0{a} libtiff5{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libuniversal-moniker-perl{a} liburi-perl{a} libwebp6{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxdot4{a} libxext6{a} libxml-libxml-perl{a} libxml-libxslt-perl{a} libxml-namespacesupport-perl{a} libxml-parser-perl{a} libxml-perl{a} libxml-sax-base-perl{a} libxml-sax-perl{a} libxml-simple-perl{a} libxml-twig-perl{a} libxml-xpath-perl{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxt6{a} libyaml-perl{a} lsb-base{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} sensible-utils{a} ucf{a} x11-common{a}
The following packages are RECOMMENDED but will NOT be installed:
bioperl-run curl fonts-liberation krb5-locales libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libapache-dbi-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libcache-cache-perl libcgi-fast-perl libclass-dbi-abstractsearch-perl libclass-xsaccessor-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-sqlite3-perl libglib2.0-data libgpm2 libgts-bin libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libipc-shareable-perl libjson-perl liblingua-en-inflect-perl liblist-moreutils-perl liblog-dispatch-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libmodule-signature-perl libpod-readme-perl libpostscript-perl libsasl2-modules libset-scalar-perl libsoap-lite-perl libsoftware-license-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libtext-iconv-perl libtext-recordparser-perl libtie-ixhash-perl libxml-checker-perl libxml-dom-xpath-perl libxml-sax-expat-perl libxml-sax-writer-perl libxml-writer-perl libyaml-libyaml-perl libyaml-syck-perl lynx perl-doc perl-tk shared-mime-info wget xdg-user-dirs xsltproc
0 packages upgraded, 199 newly installed, 0 to remove and 0 not upgraded.
Need to get 46.3 MB of archives. After unpacking 137 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian buster/main armhf libbsd0 armhf 0.9.1-2 [103 kB]
Get: 2 http://deb.debian.org/debian buster/main armhf bsdmainutils armhf 11.1.2+b1 [186 kB]
Get: 3 http://deb.debian.org/debian buster/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get: 4 http://deb.debian.org/debian buster/main armhf groff-base armhf 1.22.4-3 [828 kB]
Get: 5 http://deb.debian.org/debian buster/main armhf libpipeline1 armhf 1.5.1-2 [26.8 kB]
Get: 6 http://deb.debian.org/debian buster/main armhf man-db armhf 2.8.5-2 [1240 kB]
Get: 7 http://deb.debian.org/debian buster/main armhf netbase all 5.6 [19.4 kB]
Get: 8 http://deb.debian.org/debian buster/main armhf sensible-utils all 0.0.12 [15.8 kB]
Get: 9 http://deb.debian.org/debian buster/main armhf libmagic-mgc armhf 1:5.35-4+deb10u1 [242 kB]
Get: 10 http://deb.debian.org/debian buster/main armhf libmagic1 armhf 1:5.35-4+deb10u1 [110 kB]
Get: 11 http://deb.debian.org/debian buster/main armhf file armhf 1:5.35-4+deb10u1 [65.5 kB]
Get: 12 http://deb.debian.org/debian buster/main armhf gettext-base armhf 0.19.8.1-9 [118 kB]
Get: 13 http://deb.debian.org/debian buster/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get: 14 http://deb.debian.org/debian buster/main armhf libsigsegv2 armhf 2.12-2 [32.1 kB]
Get: 15 http://deb.debian.org/debian buster/main armhf m4 armhf 1.4.18-2 [190 kB]
Get: 16 http://deb.debian.org/debian buster/main armhf autoconf all 2.69-11 [341 kB]
Get: 17 http://deb.debian.org/debian buster/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get: 18 http://deb.debian.org/debian buster/main armhf automake all 1:1.16.1-4 [771 kB]
Get: 19 http://deb.debian.org/debian buster/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get: 20 http://deb.debian.org/debian buster/main armhf libio-string-perl all 1.08-3 [12.3 kB]
Get: 21 http://deb.debian.org/debian buster/main armhf libdata-stag-perl all 0.14-2 [448 kB]
Get: 22 http://deb.debian.org/debian buster/main armhf libbio-perl-perl all 1.7.2-3 [4553 kB]
Get: 23 http://deb.debian.org/debian buster/main armhf libclass-data-inheritable-perl all 0.08-3 [8588 B]
Get: 24 http://deb.debian.org/debian buster/main armhf libdevel-stacktrace-perl all 2.0300-1 [28.0 kB]
Get: 25 http://deb.debian.org/debian buster/main armhf libexception-class-perl all 1.44-1 [32.3 kB]
Get: 26 http://deb.debian.org/debian buster/main armhf libtest-deep-perl all 1.128-1 [48.8 kB]
Get: 27 http://deb.debian.org/debian buster/main armhf libcapture-tiny-perl all 0.48-1 [26.0 kB]
Get: 28 http://deb.debian.org/debian buster/main armhf libalgorithm-diff-perl all 1.19.03-2 [47.9 kB]
Get: 29 http://deb.debian.org/debian buster/main armhf libtext-diff-perl all 1.45-1 [27.7 kB]
Get: 30 http://deb.debian.org/debian buster/main armhf libtest-differences-perl all 0.65-1 [18.1 kB]
Get: 31 http://deb.debian.org/debian buster/main armhf libsub-uplevel-perl all 0.2800-1 [16.3 kB]
Get: 32 http://deb.debian.org/debian buster/main armhf libtest-exception-perl all 0.43-1 [18.7 kB]
Get: 33 http://deb.debian.org/debian buster/main armhf libtest-warn-perl all 0.36-1 [16.2 kB]
Get: 34 http://deb.debian.org/debian buster/main armhf libtest-most-perl all 0.35-1 [24.5 kB]
Get: 35 http://deb.debian.org/debian buster/main armhf bioperl all 1.7.2-3 [418 kB]
Get: 36 http://deb.debian.org/debian buster/main armhf libssl1.1 armhf 1.1.1d-0+deb10u3 [1299 kB]
Get: 37 http://deb.debian.org/debian buster/main armhf openssl armhf 1.1.1d-0+deb10u3 [818 kB]
Get: 38 http://deb.debian.org/debian buster/main armhf ca-certificates all 20190110 [157 kB]
Get: 39 http://deb.debian.org/debian buster/main armhf libtool all 2.4.6-9 [547 kB]
Get: 40 http://deb.debian.org/debian buster/main armhf dh-autoreconf all 19 [16.9 kB]
Get: 41 http://deb.debian.org/debian buster/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get: 42 http://deb.debian.org/debian buster/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB]
Get: 43 http://deb.debian.org/debian buster/main armhf dh-strip-nondeterminism all 1.1.2-1 [13.0 kB]
Get: 44 http://deb.debian.org/debian buster/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get: 45 http://deb.debian.org/debian buster/main armhf dwz armhf 0.12-3 [72.0 kB]
Get: 46 http://deb.debian.org/debian buster/main armhf libglib2.0-0 armhf 2.58.3-2+deb10u2 [1101 kB]
Get: 47 http://deb.debian.org/debian buster/main armhf libicu63 armhf 63.1-6+deb10u1 [8005 kB]
Get: 48 http://deb.debian.org/debian buster/main armhf libxml2 armhf 2.9.4+dfsg1-7+b3 [595 kB]
Get: 49 http://deb.debian.org/debian buster/main armhf libcroco3 armhf 0.6.12-3 [133 kB]
Get: 50 http://deb.debian.org/debian buster/main armhf libncurses6 armhf 6.1+20181013-2+deb10u2 [79.8 kB]
Get: 51 http://deb.debian.org/debian buster/main armhf gettext armhf 0.19.8.1-9 [1242 kB]
Get: 52 http://deb.debian.org/debian buster/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get: 53 http://deb.debian.org/debian buster/main armhf po-debconf all 1.0.21 [248 kB]
Get: 54 http://deb.debian.org/debian buster/main armhf debhelper all 12.1.1 [1016 kB]
Get: 55 http://deb.debian.org/debian buster/main armhf libexpat1 armhf 2.2.6-2+deb10u1 [78.0 kB]
Get: 56 http://deb.debian.org/debian buster/main armhf libpng16-16 armhf 1.6.36-6 [275 kB]
Get: 57 http://deb.debian.org/debian buster/main armhf libfreetype6 armhf 2.9.1-3+deb10u1 [322 kB]
Get: 58 http://deb.debian.org/debian buster/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get: 59 http://deb.debian.org/debian buster/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get: 60 http://deb.debian.org/debian buster/main armhf libfontconfig1 armhf 2.13.1-2 [328 kB]
Get: 61 http://deb.debian.org/debian buster/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get: 62 http://deb.debian.org/debian buster/main armhf libpixman-1-0 armhf 0.36.0-1 [465 kB]
Get: 63 http://deb.debian.org/debian buster/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get: 64 http://deb.debian.org/debian buster/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB]
Get: 65 http://deb.debian.org/debian buster/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get: 66 http://deb.debian.org/debian buster/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get: 67 http://deb.debian.org/debian buster/main armhf libx11-6 armhf 2:1.6.7-1 [698 kB]
Get: 68 http://deb.debian.org/debian buster/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get: 69 http://deb.debian.org/debian buster/main armhf libxcb-shm0 armhf 1.13.1-2 [99.0 kB]
Get: 70 http://deb.debian.org/debian buster/main armhf libxext6 armhf 2:1.3.3-1+b2 [48.1 kB]
Get: 71 http://deb.debian.org/debian buster/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get: 72 http://deb.debian.org/debian buster/main armhf libcairo2 armhf 1.16.0-4 [616 kB]
Get: 73 http://deb.debian.org/debian buster/main armhf libcdt5 armhf 2.40.1-6 [58.1 kB]
Get: 74 http://deb.debian.org/debian buster/main armhf libcgraph6 armhf 2.40.1-6 [77.3 kB]
Get: 75 http://deb.debian.org/debian buster/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [112 kB]
Get: 76 http://deb.debian.org/debian buster/main armhf libjbig0 armhf 2.1-3.1+b2 [28.4 kB]
Get: 77 http://deb.debian.org/debian buster/main armhf libwebp6 armhf 0.6.1-2 [229 kB]
Get: 78 http://deb.debian.org/debian buster/main armhf libtiff5 armhf 4.1.0+git191117-2~deb10u1 [252 kB]
Get: 79 http://deb.debian.org/debian buster/main armhf libxpm4 armhf 1:3.5.12-1 [44.0 kB]
Get: 80 http://deb.debian.org/debian buster/main armhf libgd3 armhf 2.2.5-5.2 [117 kB]
Get: 81 http://deb.debian.org/debian buster/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [137 kB]
Get: 82 http://deb.debian.org/debian buster/main armhf libltdl7 armhf 2.4.6-9 [387 kB]
Get: 83 http://deb.debian.org/debian buster/main armhf libfribidi0 armhf 1.0.5-3.1+deb10u1 [61.7 kB]
Get: 84 http://deb.debian.org/debian buster/main armhf libthai-data all 0.1.28-2 [170 kB]
Get: 85 http://deb.debian.org/debian buster/main armhf libdatrie1 armhf 0.2.12-2 [35.8 kB]
Get: 86 http://deb.debian.org/debian buster/main armhf libthai0 armhf 0.1.28-2 [50.7 kB]
Get: 87 http://deb.debian.org/debian buster/main armhf libpango-1.0-0 armhf 1.42.4-8~deb10u1 [169 kB]
Get: 88 http://deb.debian.org/debian buster/main armhf libgraphite2-3 armhf 1.3.13-7 [70.3 kB]
Get: 89 http://deb.debian.org/debian buster/main armhf libharfbuzz0b armhf 2.3.1-1 [1151 kB]
Get: 90 http://deb.debian.org/debian buster/main armhf libpangoft2-1.0-0 armhf 1.42.4-8~deb10u1 [62.7 kB]
Get: 91 http://deb.debian.org/debian buster/main armhf libpangocairo-1.0-0 armhf 1.42.4-8~deb10u1 [52.2 kB]
Get: 92 http://deb.debian.org/debian buster/main armhf libpathplan4 armhf 2.40.1-6 [61.3 kB]
Get: 93 http://deb.debian.org/debian buster/main armhf libxdot4 armhf 2.40.1-6 [55.4 kB]
Get: 94 http://deb.debian.org/debian buster/main armhf libgvc6 armhf 2.40.1-6 [556 kB]
Get: 95 http://deb.debian.org/debian buster/main armhf libgvpr2 armhf 2.40.1-6 [189 kB]
Get: 96 http://deb.debian.org/debian buster/main armhf lsb-base all 10.2019051400 [28.4 kB]
Get: 97 http://deb.debian.org/debian buster/main armhf x11-common all 1:7.7+19 [251 kB]
Get: 98 http://deb.debian.org/debian buster/main armhf libice6 armhf 2:1.0.9-2 [51.7 kB]
Get: 99 http://deb.debian.org/debian buster/main armhf liblab-gamut1 armhf 2.40.1-6 [220 kB]
Get: 100 http://deb.debian.org/debian buster/main armhf libsm6 armhf 2:1.2.3-1 [33.0 kB]
Get: 101 http://deb.debian.org/debian buster/main armhf libxt6 armhf 1:1.1.5-1+b3 [159 kB]
Get: 102 http://deb.debian.org/debian buster/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.7 kB]
Get: 103 http://deb.debian.org/debian buster/main armhf libxaw7 armhf 2:1.0.13-1+b2 [167 kB]
Get: 104 http://deb.debian.org/debian buster/main armhf graphviz armhf 2.40.1-6 [518 kB]
Get: 105 http://deb.debian.org/debian buster/main armhf libappconfig-perl all 1.71-2 [67.2 kB]
Get: 106 http://deb.debian.org/debian buster/main armhf libb-hooks-op-check-perl armhf 0.22-1+b1 [11.0 kB]
Get: 107 http://deb.debian.org/debian buster/main armhf libcarp-clan-perl all 6.07-1 [15.3 kB]
Get: 108 http://deb.debian.org/debian buster/main armhf libhtml-tagset-perl all 3.20-3 [12.7 kB]
Get: 109 http://deb.debian.org/debian buster/main armhf liburi-perl all 1.76-1 [89.9 kB]
Get: 110 http://deb.debian.org/debian buster/main armhf libhtml-parser-perl armhf 3.72-3+b3 [102 kB]
Get: 111 http://deb.debian.org/debian buster/main armhf libcgi-pm-perl all 4.40-1 [222 kB]
Get: 112 http://deb.debian.org/debian buster/main armhf libcgi-session-perl all 4.48-3 [119 kB]
Get: 113 http://deb.debian.org/debian buster/main armhf libsub-name-perl armhf 0.21-1+b3 [13.0 kB]
Get: 114 http://deb.debian.org/debian buster/main armhf libclass-accessor-perl all 0.51-1 [23.2 kB]
Get: 115 http://deb.debian.org/debian buster/main armhf libclass-accessor-chained-perl all 0.01.1~debian-4 [8300 B]
Get: 116 http://deb.debian.org/debian buster/main armhf libdbi-perl armhf 1.642-1+b1 [768 kB]
Get: 117 http://deb.debian.org/debian buster/main armhf libdbix-contextualfetch-perl all 1.03-4 [8428 B]
Get: 118 http://deb.debian.org/debian buster/main armhf libima-dbi-perl all 0.35-2 [23.7 kB]
Get: 119 http://deb.debian.org/debian buster/main armhf libio-stringy-perl all 2.111-3 [56.5 kB]
Get: 120 http://deb.debian.org/debian buster/main armhf libclass-trigger-perl all 0.14-2 [12.2 kB]
Get: 121 http://deb.debian.org/debian buster/main armhf libuniversal-moniker-perl all 0.08-8 [6920 B]
Get: 122 http://deb.debian.org/debian buster/main armhf libclone-perl armhf 0.41-1+b1 [14.0 kB]
Get: 123 http://deb.debian.org/debian buster/main armhf libclass-dbi-perl all 3.0.17-4 [120 kB]
Get: 124 http://deb.debian.org/debian buster/main armhf libdata-page-perl all 2.02-2 [10.5 kB]
Get: 125 http://deb.debian.org/debian buster/main armhf libexporter-lite-perl all 0.08-1 [11.1 kB]
Get: 126 http://deb.debian.org/debian buster/main armhf libclass-dbi-pager-perl all 0.08-5 [7916 B]
Get: 127 http://deb.debian.org/debian buster/main armhf libkeyutils1 armhf 1.6-6 [13.9 kB]
Get: 128 http://deb.debian.org/debian buster/main armhf libkrb5support0 armhf 1.17-3 [62.3 kB]
Get: 129 http://deb.debian.org/debian buster/main armhf libk5crypto3 armhf 1.17-3 [119 kB]
Get: 130 http://deb.debian.org/debian buster/main armhf libkrb5-3 armhf 1.17-3 [323 kB]
Get: 131 http://deb.debian.org/debian buster/main armhf libgssapi-krb5-2 armhf 1.17-3 [137 kB]
Get: 132 http://deb.debian.org/debian buster/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-1+deb10u1 [67.4 kB]
Get: 133 http://deb.debian.org/debian buster/main armhf libsasl2-2 armhf 2.1.27+dfsg-1+deb10u1 [98.9 kB]
Get: 134 http://deb.debian.org/debian buster/main armhf libldap-common all 2.4.47+dfsg-3+deb10u2 [89.7 kB]
Get: 135 http://deb.debian.org/debian buster/main armhf libldap-2.4-2 armhf 2.4.47+dfsg-3+deb10u2 [202 kB]
Get: 136 http://deb.debian.org/debian buster/main armhf libpq5 armhf 11.7-0+deb10u1 [152 kB]
Get: 137 http://deb.debian.org/debian buster/main armhf libdbd-pg-perl armhf 3.7.4-3 [200 kB]
Get: 138 http://deb.debian.org/debian buster/main armhf libclass-dbi-pg-perl all 0.09-5 [9290 B]
Get: 139 http://deb.debian.org/debian buster/main armhf libclass-inspector-perl all 1.32-1 [19.1 kB]
Get: 140 http://deb.debian.org/debian buster/main armhf libclass-makemethods-perl all 1.01-5 [294 kB]
Get: 141 http://deb.debian.org/debian buster/main armhf libclass-method-modifiers-perl all 2.12-1 [18.6 kB]
Get: 142 http://deb.debian.org/debian buster/main armhf libfreezethaw-perl all 0.5001-2 [16.8 kB]
Get: 143 http://deb.debian.org/debian buster/main armhf libdbix-dbschema-perl all 0.45-1 [63.3 kB]
Get: 144 http://deb.debian.org/debian buster/main armhf libparse-recdescent-perl all 1.967015+dfsg-2 [159 kB]
Get: 145 http://deb.debian.org/debian buster/main armhf libencode-locale-perl all 1.05-1 [13.7 kB]
Get: 146 http://deb.debian.org/debian buster/main armhf libtimedate-perl all 2.3000-2+deb10u1 [38.1 kB]
Get: 147 http://deb.debian.org/debian buster/main armhf libhttp-date-perl all 6.02-1 [10.7 kB]
Get: 148 http://deb.debian.org/debian buster/main armhf libfile-listing-perl all 6.04-1 [10.3 kB]
Get: 149 http://deb.debian.org/debian buster/main armhf libhtml-tree-perl all 5.07-2 [213 kB]
Get: 150 http://deb.debian.org/debian buster/main armhf libio-html-perl all 1.001-1 [17.6 kB]
Get: 151 http://deb.debian.org/debian buster/main armhf liblwp-mediatypes-perl all 6.02-1 [22.1 kB]
Get: 152 http://deb.debian.org/debian buster/main armhf libhttp-message-perl all 6.18-1 [77.8 kB]
Get: 153 http://deb.debian.org/debian buster/main armhf libhttp-cookies-perl all 6.04-1 [17.8 kB]
Get: 154 http://deb.debian.org/debian buster/main armhf libhttp-negotiate-perl all 6.01-1 [12.8 kB]
Get: 155 http://deb.debian.org/debian buster/main armhf perl-openssl-defaults armhf 3 [6782 B]
Get: 156 http://deb.debian.org/debian buster/main armhf libnet-ssleay-perl armhf 1.85-2+b1 [288 kB]
Get: 157 http://deb.debian.org/debian buster/main armhf libio-socket-ssl-perl all 2.060-3 [207 kB]
Get: 158 http://deb.debian.org/debian buster/main armhf libnet-http-perl all 6.18-1 [24.5 kB]
Get: 159 http://deb.debian.org/debian buster/main armhf liblwp-protocol-https-perl all 6.07-2 [9242 B]
Get: 160 http://deb.debian.org/debian buster/main armhf libtry-tiny-perl all 0.30-1 [23.3 kB]
Get: 161 http://deb.debian.org/debian buster/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get: 162 http://deb.debian.org/debian buster/main armhf libwww-perl all 6.36-2 [188 kB]
Get: 163 http://deb.debian.org/debian buster/main armhf libxml-parser-perl armhf 2.44-4 [210 kB]
Get: 164 http://deb.debian.org/debian buster/main armhf libxml-perl all 0.08-3 [93.3 kB]
Get: 165 http://deb.debian.org/debian buster/main armhf libdbix-dbstag-perl all 0.12-2 [102 kB]
Get: 166 http://deb.debian.org/debian buster/main armhf libdynaloader-functions-perl all 0.003-1 [12.6 kB]
Get: 167 http://deb.debian.org/debian buster/main armhf libdevel-callchecker-perl armhf 0.008-1 [15.5 kB]
Get: 168 http://deb.debian.org/debian buster/main armhf libsub-exporter-progressive-perl all 0.001013-1 [7588 B]
Get: 169 http://deb.debian.org/debian buster/main armhf libdevel-globaldestruction-perl all 0.14-1 [8084 B]
Get: 170 http://deb.debian.org/debian buster/main armhf libdigest-md5-file-perl all 0.08-1 [10.6 kB]
Get: 171 http://deb.debian.org/debian buster/main armhf libfile-sharedir-perl all 1.116-2 [16.7 kB]
Get: 172 http://deb.debian.org/debian buster/main armhf libgd-perl armhf 2.71-2 [134 kB]
Get: 173 http://deb.debian.org/debian buster/main armhf libio-pty-perl armhf 1:1.08-1.1+b5 [32.9 kB]
Get: 174 http://deb.debian.org/debian buster/main armhf libipc-run-perl all 20180523.0-1 [101 kB]
Get: 175 http://deb.debian.org/debian buster/main armhf libxml-twig-perl all 1:3.50-1.1 [179 kB]
Get: 176 http://deb.debian.org/debian buster/main armhf libxml-xpath-perl all 1.44-1 [69.5 kB]
Get: 177 http://deb.debian.org/debian buster/main armhf libgraphviz-perl all 2.22-1 [107 kB]
Get: 178 http://deb.debian.org/debian buster/main armhf libyaml-perl all 1.27-1 [66.8 kB]
Get: 179 http://deb.debian.org/debian buster/main armhf libgo-perl all 0.15-7 [267 kB]
Get: 180 http://deb.debian.org/debian buster/main armhf libgraph-perl all 1:0.9704-1 [119 kB]
Get: 181 http://deb.debian.org/debian buster/main armhf libparams-classify-perl armhf 0.015-1+b1 [24.2 kB]
Get: 182 http://deb.debian.org/debian buster/main armhf libmodule-runtime-perl all 0.016-1 [19.4 kB]
Get: 183 http://deb.debian.org/debian buster/main armhf libimport-into-perl all 1.002005-1 [11.6 kB]
Get: 184 http://deb.debian.org/debian buster/main armhf liblog-log4perl-perl all 1.49-1 [377 kB]
Get: 185 http://deb.debian.org/debian buster/main armhf libmodule-build-perl all 0.422400-1 [259 kB]
Get: 186 http://deb.debian.org/debian buster/main armhf librole-tiny-perl all 2.000006-1 [19.4 kB]
Get: 187 http://deb.debian.org/debian buster/main armhf libstrictures-perl all 2.000005-1 [18.3 kB]
Get: 188 http://deb.debian.org/debian buster/main armhf libsub-quote-perl all 2.005001-1 [17.9 kB]
Get: 189 http://deb.debian.org/debian buster/main armhf libmoo-perl all 2.003004-2 [57.4 kB]
Get: 190 http://deb.debian.org/debian buster/main armhf libpackage-variant-perl all 1.003002-1 [20.9 kB]
Get: 191 http://deb.debian.org/debian buster/main armhf libsql-translator-perl all 0.11024-1 [391 kB]
Get: 192 http://deb.debian.org/debian buster/main armhf libtemplate-perl armhf 2.27-1+b1 [564 kB]
Get: 193 http://deb.debian.org/debian buster/main armhf libxml-namespacesupport-perl all 1.12-1 [14.8 kB]
Get: 194 http://deb.debian.org/debian buster/main armhf libxml-sax-base-perl all 1.09-1 [20.4 kB]
Get: 195 http://deb.debian.org/debian buster/main armhf libxml-sax-perl all 1.00+dfsg-1 [58.6 kB]
Get: 196 http://deb.debian.org/debian buster/main armhf libxml-libxml-perl armhf 2.0134+dfsg-1 [326 kB]
Get: 197 http://deb.debian.org/debian buster/main armhf libxslt1.1 armhf 1.1.32-2.2~deb10u1 [217 kB]
Get: 198 http://deb.debian.org/debian buster/main armhf libxml-libxslt-perl armhf 1.96-1+b1 [44.7 kB]
Get: 199 http://deb.debian.org/debian buster/main armhf libxml-simple-perl all 2.25-1 [72.0 kB]
Fetched 46.3 MB in 10s (4852 kB/s)
debconf: delaying package configuration, since apt-utils is not installed
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Unpacking groff-base (1.22.4-3) ...
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Unpacking libmagic-mgc (1:5.35-4+deb10u1) ...
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Unpacking m4 (1.4.18-2) ...
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Unpacking autotools-dev (20180224.1) ...
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Unpacking automake (1:1.16.1-4) ...
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Unpacking autopoint (0.19.8.1-9) ...
Selecting previously unselected package libio-string-perl.
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Unpacking libio-string-perl (1.08-3) ...
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Selecting previously unselected package libdevel-stacktrace-perl.
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Selecting previously unselected package libexception-class-perl.
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Unpacking libcapture-tiny-perl (0.48-1) ...
Selecting previously unselected package libalgorithm-diff-perl.
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Selecting previously unselected package libssl1.1:armhf.
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Unpacking libssl1.1:armhf (1.1.1d-0+deb10u3) ...
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Unpacking openssl (1.1.1d-0+deb10u3) ...
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Selecting previously unselected package libfile-stripnondeterminism-perl.
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Unpacking gettext (0.19.8.1-9) ...
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Unpacking libcgraph6 (2.40.1-6) ...
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Unpacking libwebp6:armhf (0.6.1-2) ...
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Unpacking libthai-data (0.1.28-2) ...
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Unpacking libthai0:armhf (0.1.28-2) ...
Selecting previously unselected package libpango-1.0-0:armhf.
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Adding 'diversion of /usr/bin/config_data to /usr/bin/config_data.diverted by libmodule-build-perl'
Adding 'diversion of /usr/share/man/man1/config_data.1.gz to /usr/share/man/man1/config_data.diverted.1.gz by libmodule-build-perl'
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Setting up libdatrie1:armhf (0.2.12-2) ...
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Setting up libmagic-mgc (1:5.35-4+deb10u1) ...
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Setting up libalgorithm-diff-perl (1.19.03-2) ...
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Setting up libglib2.0-0:armhf (2.58.3-2+deb10u2) ...
No schema files found: doing nothing.
Setting up libio-stringy-perl (2.111-3) ...
Setting up libssl1.1:armhf (1.1.1d-0+deb10u3) ...
Setting up libhtml-tagset-perl (3.20-3) ...
Setting up liblwp-mediatypes-perl (6.02-1) ...
Setting up liblab-gamut1 (2.40.1-6) ...
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix.
Setting up libtry-tiny-perl (0.30-1) ...
Setting up libmagic1:armhf (1:5.35-4+deb10u1) ...
Setting up perl-openssl-defaults:armhf (3) ...
Setting up libxml-namespacesupport-perl (1.12-1) ...
Setting up gettext-base (0.19.8.1-9) ...
Setting up libencode-locale-perl (1.05-1) ...
Setting up file (1:5.35-4+deb10u1) ...
Setting up libgraph-perl (1:0.9704-1) ...
Setting up libldap-common (2.4.47+dfsg-3+deb10u2) ...
Setting up libyaml-perl (1.27-1) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libicu63:armhf (63.1-6+deb10u1) ...
Setting up libmodule-build-perl (0.422400-1) ...
Setting up libkrb5support0:armhf (1.17-3) ...
Setting up libfreezethaw-perl (0.5001-2) ...
Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-1+deb10u1) ...
Setting up libgts-0.7-5:armhf (0.7.6+darcs121130-4) ...
Setting up libxml-sax-base-perl (1.09-1) ...
Setting up libio-string-perl (1.08-3) ...
Setting up autotools-dev (20180224.1) ...
Setting up libclass-data-inheritable-perl (0.08-3) ...
Setting up liblog-log4perl-perl (1.49-1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libx11-data (2:1.6.7-1) ...
Setting up libtext-diff-perl (1.45-1) ...
Setting up libpathplan4 (2.40.1-6) ...
Setting up libncurses6:armhf (6.1+20181013-2+deb10u2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libfribidi0:armhf (1.0.5-3.1+deb10u1) ...
Setting up libpng16-16:armhf (1.6.36-6) ...
Setting up libio-html-perl (1.001-1) ...
Setting up autopoint (0.19.8.1-9) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up libb-hooks-op-check-perl (0.22-1+b1) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libipc-run-perl (20180523.0-1) ...
Setting up libk5crypto3:armhf (1.17-3) ...
Setting up libltdl7:armhf (2.4.6-9) ...
Setting up libsasl2-2:armhf (2.1.27+dfsg-1+deb10u1) ...
Setting up libsub-exporter-progressive-perl (0.001013-1) ...
Setting up libcapture-tiny-perl (0.48-1) ...
Setting up libtimedate-perl (2.3000-2+deb10u1) ...
Setting up libexporter-lite-perl (0.08-1) ...
Setting up libsub-name-perl (0.21-1+b3) ...
Setting up libdata-stag-perl (0.14-2) ...
Setting up libparse-recdescent-perl (1.967015+dfsg-2) ...
Setting up libclass-trigger-perl (0.14-2) ...
Setting up sensible-utils (0.0.12) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up librole-tiny-perl (2.000006-1) ...
Setting up libfile-sharedir-perl (1.116-2) ...
Setting up libsub-uplevel-perl (0.2800-1) ...
Setting up libthai-data (0.1.28-2) ...
Setting up libcarp-clan-perl (6.07-1) ...
Setting up libdevel-globaldestruction-perl (0.14-1) ...
Setting up netbase (5.6) ...
Setting up libstrictures-perl (2.000005-1) ...
Setting up libsub-quote-perl (2.005001-1) ...
Setting up libdevel-stacktrace-perl (2.0300-1) ...
Setting up libcdt5 (2.40.1-6) ...
Setting up libkrb5-3:armhf (1.17-3) ...
Setting up libcgraph6 (2.40.1-6) ...
Setting up libtiff5:armhf (4.1.0+git191117-2~deb10u1) ...
Setting up libbio-perl-perl (1.7.2-3) ...
Setting up libclass-accessor-perl (0.51-1) ...
Setting up openssl (1.1.1d-0+deb10u3) ...
Setting up libbsd0:armhf (0.9.1-2) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-7+b3) ...
Setting up liburi-perl (1.76-1) ...
Setting up libappconfig-perl (1.71-2) ...
Setting up libdbi-perl:armhf (1.642-1+b1) ...
Setting up libclass-makemethods-perl (1.01-5) ...
Setting up libnet-ssleay-perl (1.85-2+b1) ...
Setting up libfile-stripnondeterminism-perl (1.1.2-1) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libhttp-date-perl (6.02-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libxcb1:armhf (1.13.1-2) ...
Setting up libfile-listing-perl (6.04-1) ...
Setting up libdbix-dbschema-perl (0.45-1) ...
Setting up libtool (2.4.6-9) ...
Setting up libxcb-render0:armhf (1.13.1-2) ...
Setting up libtest-warn-perl (0.36-1) ...
Setting up libtest-differences-perl (0.65-1) ...
Setting up libldap-2.4-2:armhf (2.4.47+dfsg-3+deb10u2) ...
Setting up libnet-http-perl (6.18-1) ...
Setting up m4 (1.4.18-2) ...
Setting up libclass-accessor-chained-perl (0.01.1~debian-4) ...
Setting up libxcb-shm0:armhf (1.13.1-2) ...
Setting up libexception-class-perl (1.44-1) ...
Setting up libdevel-callchecker-perl (0.008-1) ...
Setting up libdbix-contextualfetch-perl (1.03-4) ...
Setting up libthai0:armhf (0.1.28-2) ...
Setting up ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
128 added, 0 removed; done.
Setting up libima-dbi-perl (0.35-2) ...
Setting up libtest-exception-perl (0.43-1) ...
Setting up libdata-page-perl (2.02-2) ...
Setting up libfreetype6:armhf (2.9.1-3+deb10u1) ...
Setting up bsdmainutils (11.1.2+b1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-3) ...
Setting up libcroco3:armhf (0.6.12-3) ...
Setting up ucf (3.0038+nmu1) ...
Setting up libtemplate-perl (2.27-1+b1) ...
Setting up autoconf (2.69-11) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libgvpr2 (2.40.1-6) ...
Setting up dwz (0.12-3) ...
Setting up groff-base (1.22.4-3) ...
Setting up libhtml-parser-perl (3.72-3+b3) ...
Setting up libxslt1.1:armhf (1.1.32-2.2~deb10u1) ...
Setting up libclass-dbi-perl (3.0.17-4) ...
Setting up libx11-6:armhf (2:1.6.7-1) ...
Setting up libharfbuzz0b:armhf (2.3.1-1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libio-socket-ssl-perl (2.060-3) ...
Setting up libhttp-message-perl (6.18-1) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libhttp-negotiate-perl (6.01-1) ...
Setting up gettext (0.19.8.1-9) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libhttp-cookies-perl (6.04-1) ...
Setting up libtest-most-perl (0.35-1) ...
Setting up fontconfig-config (2.13.1-2) ...
Setting up libhtml-tree-perl (5.07-2) ...
Setting up libparams-classify-perl (0.015-1+b1) ...
Setting up libcgi-pm-perl (4.40-1) ...
Setting up libpq5:armhf (11.7-0+deb10u1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libdbd-pg-perl (3.7.4-3) ...
Setting up man-db (2.8.5-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxml-sax-perl (1.00+dfsg-1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libmodule-runtime-perl (0.016-1) ...
Setting up libcgi-session-perl (4.48-3) ...
Setting up libclass-dbi-pager-perl (0.08-5) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up libxml-libxml-perl (2.0134+dfsg-1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up bioperl (1.7.2-3) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up libclass-dbi-pg-perl (0.09-5) ...
Setting up libxmu6:armhf (2:1.1.2-2+b3) ...
Setting up libimport-into-perl (1.002005-1) ...
Setting up libmoo-perl (2.003004-2) ...
Setting up po-debconf (1.0.21) ...
Setting up libpango-1.0-0:armhf (1.42.4-8~deb10u1) ...
Setting up libxaw7:armhf (2:1.0.13-1+b2) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up libgd3:armhf (2.2.5-5.2) ...
Setting up libxml-simple-perl (2.25-1) ...
Setting up libxml-libxslt-perl (1.96-1+b1) ...
Setting up libpangoft2-1.0-0:armhf (1.42.4-8~deb10u1) ...
Setting up libpackage-variant-perl (1.003002-1) ...
Setting up libpangocairo-1.0-0:armhf (1.42.4-8~deb10u1) ...
Setting up libsql-translator-perl (0.11024-1) ...
Setting up libgd-perl (2.71-2) ...
Setting up libgvc6 (2.40.1-6) ...
Setting up graphviz (2.40.1-6) ...
Setting up dh-autoreconf (19) ...
Setting up liblwp-protocol-https-perl (6.07-2) ...
Setting up libwww-perl (6.36-2) ...
Setting up debhelper (12.1.1) ...
Setting up libdigest-md5-file-perl (0.08-1) ...
Setting up dh-strip-nondeterminism (1.1.2-1) ...
Setting up libxml-parser-perl (2.44-4) ...
Setting up libxml-twig-perl (1:3.50-1.1) ...
Setting up libxml-xpath-perl (1.44-1) ...
Setting up libxml-perl (0.08-3) ...
Setting up libgraphviz-perl (2.22-1) ...
Setting up libdbix-dbstag-perl (0.12-2) ...
Setting up libgo-perl (0.15-7) ...
Processing triggers for libc-bin (2.28-10) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
Reading package lists...
Building dependency tree...
Reading state information...
fakeroot is already the newest version (1.23-1).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
I: Building the package
I: Running cd /build/libchado-perl-1.31/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b
dpkg-buildpackage: info: source package libchado-perl
dpkg-buildpackage: info: source version 1.31-5
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --buildsystem=perl_makemaker
dh_auto_clean -O--buildsystem=perl_makemaker
dh_autoreconf_clean -O--buildsystem=perl_makemaker
dh_clean -O--buildsystem=perl_makemaker
debian/rules build
dh build --buildsystem=perl_makemaker
dh_update_autotools_config -O--buildsystem=perl_makemaker
dh_autoreconf -O--buildsystem=perl_makemaker
debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/libchado-perl-1.31'
perl Makefile.PL INSTALL_BASE=/usr DBNAME=gmod-chado DBUSER=chado DBPASS=chado DBHOST=localhost DBPORT=5432 GMOD_ROOT=/build/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado DBDRIVER=PostgreSQL RECONFIGURE=1 SIMPLE=Y LOCAL_TMP=/build/libchado-perl-1.31/debian/libchado-perl/tmp
Building with the following database options:
GMOD_ROOT=/build/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado
DBDRIVER=PostgreSQL
DBNAME=gmod-chado
DBUSER=chado
DBPASS=chado
DBHOST=localhost
DBPORT=5432
SCHEMA=
LOCAL_TMP=/build/libchado-perl-1.31/debian/libchado-perl/tmp
DBORGANISM=
DEFAULT=
VERSION=1.31
Extracting /build/libchado-perl-1.31/bin/../lib/Bio/Chado/AutoDBI.pm (with variable substitutions)
initializing load scripts...
Created MYMETA.yml and MYMETA.json
Creating new 'Build' script for 'Chado' version '1.31'
Building Chado
Checking if your kit is complete...
Looks good
Warning: prerequisite Bio::Chado::Schema 0 not found.
Generating a Unix-style Makefile
Writing Makefile for chado
Writing MYMETA.yml and MYMETA.json
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
Makefile written. Now you should do the following, in order:
1. make (creates necessary build files)
2. sudo make install (creates $GMOD_ROOT and subdirectories)
-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*WARNING-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
STEP 3 WILL DELETE ANY DATA IN A DATABASE WITH THE
DATABASE NAME YOU PROVIDED!
-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*WARNING-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
3a. make load_schema (loads SQL schema into database)
or
3b. make update (update an old Chado schema and stop here)
4. make prepdb (loads basic data)
5. make ontologies (loads data for various ontologies)
Optional Targets:
make rm_locks (removes ontology lock files, allowing installation
of ontologies on successive builds of the database
without removing the ontology files altogether)
make clean (remove build related files and ontology tmp dir)
make instructions (at any moment display these instructions)
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
make[1]: Leaving directory '/build/libchado-perl-1.31'
dh_auto_build -O--buildsystem=perl_makemaker
make -j3
make[1]: Entering directory '/build/libchado-perl-1.31'
Skip blib/lib/Bio/GMOD/Bulkfiles/BlastWriter.pm (unchanged)
Skip blib/lib/Bio/GMOD/Config.pm (unchanged)
Skip blib/lib/Bio/Chado/Config.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles/MyLargePrimarySeq.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles/FastaWriter.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles/AcodeWriter.pm (unchanged)
Skip blib/lib/Bio/FeatureIO/chadobulk.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles/TableWriter.pm (unchanged)
Skip blib/lib/Bio/Chado/Builder.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles/GenbankSubmitWriter.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles/GnomapWriter.pm (unchanged)
Skip blib/lib/Bio/GMOD/DB/Adapter/FeatureIterator.pm (unchanged)
Skip blib/lib/Bio/GMOD/SeqUtils.pm (unchanged)
Skip blib/lib/Bio/GMOD/DB/Config.pm (unchanged)
Skip blib/lib/Bio/GMOD/DB/Adapter.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles/SWISS_CRC64.pm (unchanged)
Skip blib/lib/Bio/GMOD/Load/GFF.pm (unchanged)
Skip blib/lib/Bio/FeatureIO/chado.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles/FeatureWriter.pm (unchanged)
Skip blib/lib/Bio/GMOD/Load.pm (unchanged)
Skip blib/lib/Bio/Chado/AutoDBI.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles/MySplitLocation.pm (unchanged)
Skip blib/lib/Bio/GMOD/DB/Adapter/Wormbase.pm (unchanged)
Skip blib/lib/Bio/GMOD/Config2.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles.pm (unchanged)
Skip blib/lib/Bio/GMOD/Bulkfiles/BulkWriter.pm (unchanged)
Skip blib/lib/Bio/GMOD/DB/Tools/ETA.pm (unchanged)
"/usr/bin/perl" "-Iblib/arch" "-Iblib/lib" load/bin/bulk_load_gff3.PLS load/bin/gmod_bulk_load_gff3.pl
"/usr/bin/perl" "-Iblib/arch" "-Iblib/lib" install_util/conf_install.PLS install_util/conf_install.pl
Extracting conf_install.pl (with variable substitutions)
"/usr/bin/perl" "-Iblib/arch" "-Iblib/lib" install_util/src_install.PLS install_util/src_install.pl
Extracting src_install.pl (with variable substitutions)
cp bin/gmod_add_organism.pl blib/script/gmod_add_organism.pl
cp bin/gmod_apollo_triggers.pl blib/script/gmod_apollo_triggers.pl
cp load/bin/gmod_bulk_load_gff3.pl blib/script/gmod_bulk_load_gff3.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_add_organism.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_apollo_triggers.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_bulk_load_gff3.pl
cp bin/gmod_bulk_load_pubmed.pl blib/script/gmod_bulk_load_pubmed.pl
cp bin/gmod_chado_properties.pl blib/script/gmod_chado_properties.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_bulk_load_pubmed.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_chado_properties.pl
cp bin/gmod_extract_dbxref_from_gff.pl blib/script/gmod_extract_dbxref_from_gff.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_extract_dbxref_from_gff.pl
cp bin/gmod_fasta2gff3.pl blib/script/gmod_fasta2gff3.pl
cp bin/gmod_gff3_preprocessor.pl blib/script/gmod_gff3_preprocessor.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_fasta2gff3.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_gff3_preprocessor.pl
cp bin/gmod_load_cvterms.pl blib/script/gmod_load_cvterms.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_load_cvterms.pl
cp bin/gmod_make_cvtermpath.pl blib/script/gmod_make_cvtermpath.pl
cp bin/gmod_make_gff_from_dbxref.pl blib/script/gmod_make_gff_from_dbxref.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_make_cvtermpath.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_make_gff_from_dbxref.pl
cp bin/gmod_materialized_view_tool.pl blib/script/gmod_materialized_view_tool.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_materialized_view_tool.pl
cp bin/gmod_sort_gff3.pl blib/script/gmod_sort_gff3.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_sort_gff3.pl
Manifying 12 pod documents
Manifying 26 pod documents
make[1]: Leaving directory '/build/libchado-perl-1.31'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/libchado-perl-1.31'
echo "Skipping tests to avoid db access"
Skipping tests to avoid db access
make[1]: Leaving directory '/build/libchado-perl-1.31'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary
dh binary --buildsystem=perl_makemaker
dh_testroot -O--buildsystem=perl_makemaker
dh_prep -O--buildsystem=perl_makemaker
dh_installdirs -O--buildsystem=perl_makemaker
dh_auto_install -O--buildsystem=perl_makemaker
make -j3 install DESTDIR=/build/libchado-perl-1.31/debian/tmp AM_UPDATE_INFO_DIR=no PREFIX=/usr
make[1]: Entering directory '/build/libchado-perl-1.31'
"/usr/bin/perl" "/build/libchado-perl-1.31/install_util/conf_install.pl" 'GMOD_ROOT=/build/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado' 'VERSION=1.31'
"/usr/bin/perl" "/build/libchado-perl-1.31/install_util/src_install.pl" 'GMOD_ROOT=/build/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado'
Manifying 12 pod documents
Manifying 26 pod documents
Appending installation info to /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/perllocal.pod
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/FeatureIO/chado.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/FeatureIO/chadobulk.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/Chado/Config.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/Chado/Builder.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/Chado/AutoDBI.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Config.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Load.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/SeqUtils.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Config2.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/GenbankSubmitWriter.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/MySplitLocation.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/FeatureWriter.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/BulkWriter.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/FastaWriter.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/MyLargePrimarySeq.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/SWISS_CRC64.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/AcodeWriter.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/BlastWriter.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/GnomapWriter.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/TableWriter.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Config.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Adapter.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Tools/ETA.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Adapter/Wormbase.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Adapter/FeatureIterator.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Load/GFF.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_gff3_preprocessor.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_make_gff_from_dbxref.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_bulk_load_pubmed.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_materialized_view_tool.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_load_cvterms.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_fasta2gff3.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_extract_dbxref_from_gff.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_make_cvtermpath.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_sort_gff3.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_chado_properties.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_add_organism.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_bulk_load_gff3.pl.1p
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Adapter::FeatureIterator.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::SeqUtils.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Config2.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::FeatureIO::chado.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::GenbankSubmitWriter.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::GnomapWriter.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::MyLargePrimarySeq.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Load::GFF.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::Chado::Builder.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Adapter::Wormbase.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Load.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::SWISS_CRC64.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Config.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Tools::ETA.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::BlastWriter.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Adapter.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::FeatureIO::chadobulk.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Config.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::Chado::Config.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::FastaWriter.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::BulkWriter.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::AcodeWriter.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::FeatureWriter.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::TableWriter.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::MySplitLocation.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles.3pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/dbi.tt2
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2html.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_sort_gff3.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/ucsc_genes2gff.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/chado-fix-flybase-instance.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_chado_properties.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2diagram.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/chado-build-schema.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/load_taxonomy_cvterms.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/create_so_bridge_command
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/GMODCallHome.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_bulkfiles.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_load_cvterms.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_extract_dbxref_from_gff.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/ucsc_snp2gff.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/interactions2SIF.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2graphviz.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/make_cvtermpath.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_make_cvtermpath.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/create-so-bridge.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_fasta2gff3.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/make_partial_indexes.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2cdbi_viaTT.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/test_load.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/make_cvtermpath.sh
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_dump_gff3.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_gff3_preprocessor.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_gff2biomart5.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/load_ncbi_taxonomy.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/addcascades
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_bulk_load_gff3.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_make_gff_from_dbxref.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2graphviz_svg.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/Skip_tables.pm
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/config.PLS
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_materialized_view_tool.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/create-bridge-sql.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/privileges.tmpl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/AutoDBI.PL
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/test_load.sh
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_update_chado.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/ddltrans
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_apollo_triggers.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_bulk_load_pubmed.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gencode2sql.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_add_organism.pl
Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2cdbi.pl
make[1]: Leaving directory '/build/libchado-perl-1.31'
debian/rules override_dh_install
make[1]: Entering directory '/build/libchado-perl-1.31'
dh_install -O--buildsystem=perl_makemaker
rm -f debian/libchado-perl/usr/share/gmod/chado/load/etc/load.conf
sed -i 's/SQLFILE=\/.*\/libchado-perl/SQLFILE=/' debian/libchado-perl/usr/share/gmod/chado/conf/gmod-chado.conf
sed -i 's/TMP=\/.*\/tmp/CONF=\/tmp/' debian/libchado-perl/usr/share/gmod/chado/conf/gmod.conf
sed -i 's/CONF=.*\/conf/CONF=\/etc\/gmod/' debian/libchado-perl/usr/share/gmod/chado/conf/gmod.conf
mv /build/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado/conf/* debian/libchado-perl/etc/gmod/
# Give exexution rights to perl scripts
find debian/libchado-perl/ -name *.pl | xargs chmod 755
find debian/libchado-perl/ -name *.tmpl | xargs chmod 644
find debian/libchado-perl/ -name *.pm | xargs chmod 644
find debian/libchado-perl/ -name *.pod | xargs rm -f
find debian/libchado-perl/ -name .packlist | xargs rm -f
find debian/libchado-perl/ -name "*.sql" | xargs chmod a-x
chmod 755 debian/libchado-perl/usr/share/gmod/chado/soi/t/t_soi_parse_intersect
chmod 755 debian/libchado-perl/usr/share/gmod/chado/src/chado/modules/audit/make_audit_ddl
mv debian/tmp/usr/bin/test* debian/libchado-perl/usr/share/gmod/chado/bin/
mv debian/tmp/usr/bin/gmod_chado* debian/libchado-perl/usr/share/gmod/chado/bin/
mv debian/tmp/usr/bin/config* debian/libchado-perl/usr/share/gmod/chado/bin/
mv debian/tmp/usr/bin/Auto* debian/libchado-perl/usr/share/gmod/chado/bin/
mv debian/tmp/usr/bin/* debian/chado-utils/usr/share/gmod/chado/bin/
mv debian/tmp/usr/lib/perl5/* debian/libchado-perl/usr/share/perl5/
rm -rf debian/libchado-perl/usr/lib/perl5
mv debian/tmp/usr/man/man3 debian/libchado-perl/usr/share/man
mv debian/tmp/usr/man/man1 debian/chado-utils/usr/share/man
cp debian/testdb.pl debian/libchado-perl/usr/share/gmod/chado/bin/
rm -rf debian/libchado-perl/usr/share/perl5/x86_64-linux-gnu-thread-multi
# Needed for runtime configure
rm -rf debian/libchado-perl/usr/share/gmod/chado/lib
rm -rf debian/libchado-perl/usr/bin
rm -rf debian/libchado-perl/usr/lib
rm -rf debian/libchado-perl/usr/share/gmod/chado/load/logs
rm -rf debian/libchado-perl/usr/share/gmod/chado/tmp
# Remove not required man pages for user (also contains pod2man errors and missing what-is)
rm -rf debian/libchado-perl/usr/share/man
# Fix perl interpreter path
for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \
sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \
done
make[1]: Leaving directory '/build/libchado-perl-1.31'
debian/rules override_dh_installdocs
make[1]: Entering directory '/build/libchado-perl-1.31'
dh_installdocs
# remove installation doc
find debian -name "INSTALL.Chado*" -delete
make[1]: Leaving directory '/build/libchado-perl-1.31'
dh_installchangelogs -O--buildsystem=perl_makemaker
dh_installexamples -O--buildsystem=perl_makemaker
dh_installman -O--buildsystem=perl_makemaker
dh_installinit -O--buildsystem=perl_makemaker
dh_lintian -O--buildsystem=perl_makemaker
dh_perl -O--buildsystem=perl_makemaker
dh_link -O--buildsystem=perl_makemaker
dh_strip_nondeterminism -O--buildsystem=perl_makemaker
dh_compress -O--buildsystem=perl_makemaker
debian/rules override_dh_fixperms
make[1]: Entering directory '/build/libchado-perl-1.31'
dh_fixperms
chmod 644 debian/libchado-perl/etc/gmod/gmod-chado.conf
find debian -name create_so_bridge_command -exec chmod 644 \{\} \;
find debian -name Skip_tables.pm -exec chmod 644 \{\} \;
find debian -name "*.tt2" -exec chmod 644 \{\} \;
find debian -name "*.tmpl" -exec chmod 644 \{\} \;
make[1]: Leaving directory '/build/libchado-perl-1.31'
dh_missing -O--buildsystem=perl_makemaker
dh_installdeb -O--buildsystem=perl_makemaker
dh_gencontrol -O--buildsystem=perl_makemaker
dh_md5sums -O--buildsystem=perl_makemaker
dh_builddeb -O--buildsystem=perl_makemaker
dpkg-deb: building package 'chado-utils' in '../chado-utils_1.31-5_all.deb'.
dpkg-deb: building package 'libchado-perl' in '../libchado-perl_1.31-5_all.deb'.
dpkg-genbuildinfo --build=binary
dpkg-genchanges --build=binary >../libchado-perl_1.31-5_armhf.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/13802 and its subdirectories
I: Current time: Sun Jun 14 18:43:25 -12 2020
I: pbuilder-time-stamp: 1592203405
Mon Jun 15 06:43:35 UTC 2020 I: 1st build successful. Starting 2nd build on remote node jtk1b-armhf-rb.debian.net.
Mon Jun 15 06:43:35 UTC 2020 I: Preparing to do remote build '2' on jtk1b-armhf-rb.debian.net.
Mon Jun 15 06:50:36 UTC 2020 I: Deleting $TMPDIR on jtk1b-armhf-rb.debian.net.
Mon Jun 15 06:50:38 UTC 2020 I: libchado-perl_1.31-5_armhf.changes:
Format: 1.8
Date: Thu, 27 Sep 2018 20:49:54 +0200
Source: libchado-perl
Binary: chado-utils libchado-perl
Architecture: all
Version: 1.31-5
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
chado-utils - tools to add/extract data from Chado
libchado-perl - database schema and tools for genomic data
Changes:
libchado-perl (1.31-5) unstable; urgency=medium
.
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
* Fix perl interpreter path
* Do not parse d/changelog
* Fix permissions
* Do not include installation docs
Checksums-Sha1:
f33c8cfc3b6c63fcb616404809743a69810eff4b 133508 chado-utils_1.31-5_all.deb
f1b0c1f3a2bd0388d5ba3fc2f7a5c4be1a005057 2281192 libchado-perl_1.31-5_all.deb
76b8b5eb0aaa9e06c047fdb5ccea874c0ed00d94 10118 libchado-perl_1.31-5_armhf.buildinfo
Checksums-Sha256:
79964bd7fe1e4ecf85a8a35139ff11255ee4ff7430ea049fe0302e44cf3322c5 133508 chado-utils_1.31-5_all.deb
f8ecc0ffd4b3bce38b4b6f2f316a6bcd6287b134cb33b4c0422e8a42304c503f 2281192 libchado-perl_1.31-5_all.deb
e45be7ce7a6f5d1178fdcfe710c21713d47d1fbfecf5548c09fe05f7b702f0b7 10118 libchado-perl_1.31-5_armhf.buildinfo
Files:
4d0224c2a9025fc9e41da6e521b64f51 133508 perl optional chado-utils_1.31-5_all.deb
af465d9ddf0ca3759a157e04570305e2 2281192 perl optional libchado-perl_1.31-5_all.deb
f7c62cf2d5f8f7d9ae22ca36b7ea0d7f 10118 perl optional libchado-perl_1.31-5_armhf.buildinfo
Mon Jun 15 06:50:40 UTC 2020 I: diffoscope 147 will be used to compare the two builds:
# Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.P9p6jQ05kv/libchado-perl_1.31-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.P9p6jQ05kv/libchado-perl_1.31-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.P9p6jQ05kv/libchado-perl_1.31-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.P9p6jQ05kv/b1/libchado-perl_1.31-5_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.P9p6jQ05kv/b2/libchado-perl_1.31-5_armhf.changes
## command (total time: 0.000s)
0.000s 1 call cmp (internal)
## has_same_content_as (total time: 0.000s)
0.000s 1 call abc.DotChangesFile
## main (total time: 0.396s)
0.396s 2 calls outputs
0.000s 1 call cleanup
## recognizes (total time: 0.049s)
0.049s 10 calls diffoscope.comparators.binary.FilesystemFile
0.000s 8 calls abc.DotChangesFile
Mon Jun 15 06:50:41 UTC 2020 I: diffoscope 147 found no differences in the changes files, and a .buildinfo file also exists.
Mon Jun 15 06:50:41 UTC 2020 I: libchado-perl from buster built successfully and reproducibly on armhf.
Mon Jun 15 06:50:43 UTC 2020 I: Submitting .buildinfo files to external archives:
Mon Jun 15 06:50:43 UTC 2020 I: Submitting 12K b1/libchado-perl_1.31-5_armhf.buildinfo.asc
Mon Jun 15 06:50:44 UTC 2020 I: Submitting 12K b2/libchado-perl_1.31-5_armhf.buildinfo.asc
Mon Jun 15 06:50:44 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit.
Mon Jun 15 06:50:44 UTC 2020 I: Done submitting .buildinfo files.
Mon Jun 15 06:50:44 UTC 2020 I: Removing signed libchado-perl_1.31-5_armhf.buildinfo.asc files:
removed './b1/libchado-perl_1.31-5_armhf.buildinfo.asc'
removed './b2/libchado-perl_1.31-5_armhf.buildinfo.asc'