Wed Sep 2 20:16:14 UTC 2020 I: starting to build profnet/buster/armhf on jenkins on '2020-09-02 20:15'
Wed Sep 2 20:16:14 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_53/123/console.log
Wed Sep 2 20:16:14 UTC 2020 I: Downloading source for buster/profnet=1.0.22-6
--2020-09-02 20:16:14-- http://deb.debian.org/debian/pool/main/p/profnet/profnet_1.0.22-6.dsc
Connecting to 78.137.99.97:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 2515 (2.5K)
Saving to: ‘profnet_1.0.22-6.dsc’
0K .. 100% 82.5M=0s
2020-09-02 20:16:14 (82.5 MB/s) - ‘profnet_1.0.22-6.dsc’ saved [2515/2515]
Wed Sep 2 20:16:14 UTC 2020 I: profnet_1.0.22-6.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: profnet
Binary: profnet-bval, profnet-chop, profnet-con, profnet-isis, profnet-md, profnet-norsnet, profnet-prof, profnet-snapfun, profphd-net
Architecture: any
Version: 1.0.22-6
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Guy Yachdav <gyachdav@rostlab.org>, Laszlo Kajan <lkajan@rostlab.org>, Andreas Tille <tille@debian.org>
Homepage: http://www.predictprotein.org/
Standards-Version: 4.2.1
Vcs-Browser: https://salsa.debian.org/med-team/profnet
Vcs-Git: https://salsa.debian.org/med-team/profnet.git
Testsuite: autopkgtest
Build-Depends: debhelper (>= 11~), gfortran, rsync
Package-List:
profnet-bval deb science optional arch=any
profnet-chop deb science optional arch=any
profnet-con deb science optional arch=any
profnet-isis deb science optional arch=any
profnet-md deb science optional arch=any
profnet-norsnet deb science optional arch=any
profnet-prof deb science optional arch=any
profnet-snapfun deb science optional arch=any
profphd-net deb science optional arch=any
Checksums-Sha1:
9e54f4eff4e19f24617ed327f65d68b8da5c80b7 203676 profnet_1.0.22.orig.tar.gz
239fbc4d9923f2c42eb489ad311eaf651633346b 54224 profnet_1.0.22-6.debian.tar.xz
Checksums-Sha256:
a124bbb7822a22189ddc410032cfd1c1ccd30129eecf4a7cd09608edd3955f18 203676 profnet_1.0.22.orig.tar.gz
eda615ddfe2b67a59b63893f93dd6df157adc47e165d756b82465de6a9f21877 54224 profnet_1.0.22-6.debian.tar.xz
Files:
72ad53038b158655812a256a2a335f99 203676 profnet_1.0.22.orig.tar.gz
09a20761bef0d0c457f96a7726dfb99c 54224 profnet_1.0.22-6.debian.tar.xz
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Wed Sep 2 20:16:14 UTC 2020 I: Checking whether the package is not for us
Wed Sep 2 20:16:14 UTC 2020 I: Starting 1st build on remote node jtk1a-armhf-rb.debian.net.
Wed Sep 2 20:16:14 UTC 2020 I: Preparing to do remote build '1' on jtk1a-armhf-rb.debian.net.
Wed Sep 2 20:35:35 UTC 2020 I: Deleting $TMPDIR on jtk1a-armhf-rb.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Wed Sep 2 08:16:42 -12 2020
I: pbuilder-time-stamp: 1599077802
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz]
I: copying local configuration
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [profnet_1.0.22-6.dsc]
I: copying [./profnet_1.0.22.orig.tar.gz]
I: copying [./profnet_1.0.22-6.debian.tar.xz]
I: Extracting source
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Oct 23 05:47:32 2018 -12
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./profnet_1.0.22-6.dsc
dpkg-source: info: extracting profnet in profnet-1.0.22
dpkg-source: info: unpacking profnet_1.0.22.orig.tar.gz
dpkg-source: info: unpacking profnet_1.0.22-6.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying hardening.patch
I: using fakeroot in build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/2082/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='armhf'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3'
DISTRIBUTION=''
HOME='/root'
HOST_ARCH='armhf'
IFS='
'
INVOCATION_ID='2e6b12c995874c4c96a0ee7f79b4c69a'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='2082'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.ZLrkS3xLZ1/pbuilderrc_yjFp --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.ZLrkS3xLZ1/b1 --logfile b1/build.log profnet_1.0.22-6.dsc'
SUDO_GID='113'
SUDO_UID='107'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://10.0.0.15:8000/'
I: uname -a
Linux jtk1a 4.19.0-10-armmp-lpae #1 SMP Debian 4.19.132-1 (2020-07-24) armv7l GNU/Linux
I: ls -l /bin
total 3328
-rwxr-xr-x 1 root root 767656 Apr 17 2019 bash
-rwxr-xr-x 3 root root 26052 Jul 10 2019 bunzip2
-rwxr-xr-x 3 root root 26052 Jul 10 2019 bzcat
lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff
-rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff
lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep
-rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe
lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep
-rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep
-rwxr-xr-x 3 root root 26052 Jul 10 2019 bzip2
-rwxr-xr-x 1 root root 9636 Jul 10 2019 bzip2recover
lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore
-rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore
-rwxr-xr-x 1 root root 22432 Feb 28 2019 cat
-rwxr-xr-x 1 root root 38868 Feb 28 2019 chgrp
-rwxr-xr-x 1 root root 38836 Feb 28 2019 chmod
-rwxr-xr-x 1 root root 42972 Feb 28 2019 chown
-rwxr-xr-x 1 root root 88376 Feb 28 2019 cp
-rwxr-xr-x 1 root root 75516 Jan 17 2019 dash
-rwxr-xr-x 1 root root 71648 Feb 28 2019 date
-rwxr-xr-x 1 root root 51212 Feb 28 2019 dd
-rwxr-xr-x 1 root root 55672 Feb 28 2019 df
-rwxr-xr-x 1 root root 88444 Feb 28 2019 dir
-rwxr-xr-x 1 root root 54872 Jan 9 2019 dmesg
lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname
lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname
-rwxr-xr-x 1 root root 22364 Feb 28 2019 echo
-rwxr-xr-x 1 root root 28 Jan 7 2019 egrep
-rwxr-xr-x 1 root root 18260 Feb 28 2019 false
-rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep
-rwxr-xr-x 1 root root 47356 Jan 9 2019 findmnt
-rwsr-xr-x 1 root root 21980 Apr 22 07:38 fusermount
-rwxr-xr-x 1 root root 124508 Jan 7 2019 grep
-rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip
-rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe
-rwxr-xr-x 1 root root 64232 Jan 5 2019 gzip
-rwxr-xr-x 1 root root 13784 Sep 26 2018 hostname
-rwxr-xr-x 1 root root 43044 Feb 28 2019 ln
-rwxr-xr-x 1 root root 34932 Jul 26 2018 login
-rwxr-xr-x 1 root root 88444 Feb 28 2019 ls
-rwxr-xr-x 1 root root 67036 Jan 9 2019 lsblk
-rwxr-xr-x 1 root root 47168 Feb 28 2019 mkdir
-rwxr-xr-x 1 root root 43040 Feb 28 2019 mknod
-rwxr-xr-x 1 root root 26552 Feb 28 2019 mktemp
-rwxr-xr-x 1 root root 26024 Jan 9 2019 more
-rwsr-xr-x 1 root root 34268 Jan 9 2019 mount
-rwxr-xr-x 1 root root 9688 Jan 9 2019 mountpoint
-rwxr-xr-x 1 root root 84284 Feb 28 2019 mv
lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname
lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5
-rwxr-xr-x 1 root root 22416 Feb 28 2019 pwd
lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash
-rwxr-xr-x 1 root root 26504 Feb 28 2019 readlink
-rwxr-xr-x 1 root root 42968 Feb 28 2019 rm
-rwxr-xr-x 1 root root 26496 Feb 28 2019 rmdir
-rwxr-xr-x 1 root root 14136 Jan 21 2019 run-parts
-rwxr-xr-x 1 root root 76012 Dec 22 2018 sed
lrwxrwxrwx 1 root root 4 Aug 30 20:27 sh -> dash
-rwxr-xr-x 1 root root 22384 Feb 28 2019 sleep
-rwxr-xr-x 1 root root 51124 Feb 28 2019 stty
-rwsr-xr-x 1 root root 42472 Jan 9 2019 su
-rwxr-xr-x 1 root root 22392 Feb 28 2019 sync
-rwxr-xr-x 1 root root 283324 Apr 23 2019 tar
-rwxr-xr-x 1 root root 9808 Jan 21 2019 tempfile
-rwxr-xr-x 1 root root 63464 Feb 28 2019 touch
-rwxr-xr-x 1 root root 18260 Feb 28 2019 true
-rwxr-xr-x 1 root root 9636 Apr 22 07:38 ulockmgr_server
-rwsr-xr-x 1 root root 21976 Jan 9 2019 umount
-rwxr-xr-x 1 root root 22380 Feb 28 2019 uname
-rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress
-rwxr-xr-x 1 root root 88444 Feb 28 2019 vdir
-rwxr-xr-x 1 root root 21980 Jan 9 2019 wdctl
-rwxr-xr-x 1 root root 946 Jan 21 2019 which
lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname
-rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat
-rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp
-rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff
-rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep
-rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep
-rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce
-rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep
-rwxr-xr-x 1 root root 2205 Jan 5 2019 zless
-rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore
-rwxr-xr-x 1 root root 4552 Jan 5 2019 znew
I: user script /srv/workspace/pbuilder/2082/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: armhf
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper (>= 11~), gfortran, rsync
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 18932 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however:
Package debhelper is not installed.
pbuilder-satisfydepends-dummy depends on gfortran; however:
Package gfortran is not installed.
pbuilder-satisfydepends-dummy depends on rsync; however:
Package rsync is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-8{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libcroco3{a} libelf1{a} libfile-stripnondeterminism-perl{a} libgfortran-8-dev{a} libgfortran5{a} libglib2.0-0{a} libicu63{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libpipeline1{a} libpopt0{a} libsigsegv2{a} libtool{a} libuchardet0{a} libxml2{a} lsb-base{a} m4{a} man-db{a} po-debconf{a} rsync{a} sensible-utils{a}
The following packages are RECOMMENDED but will NOT be installed:
curl libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs
0 packages upgraded, 40 newly installed, 0 to remove and 0 not upgraded.
Need to get 26.4 MB of archives. After unpacking 82.3 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian buster/main armhf libbsd0 armhf 0.9.1-2 [103 kB]
Get: 2 http://deb.debian.org/debian buster/main armhf bsdmainutils armhf 11.1.2+b1 [186 kB]
Get: 3 http://deb.debian.org/debian buster/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get: 4 http://deb.debian.org/debian buster/main armhf groff-base armhf 1.22.4-3 [828 kB]
Get: 5 http://deb.debian.org/debian buster/main armhf libpipeline1 armhf 1.5.1-2 [26.8 kB]
Get: 6 http://deb.debian.org/debian buster/main armhf man-db armhf 2.8.5-2 [1240 kB]
Get: 7 http://deb.debian.org/debian buster/main armhf sensible-utils all 0.0.12 [15.8 kB]
Get: 8 http://deb.debian.org/debian buster/main armhf libmagic-mgc armhf 1:5.35-4+deb10u1 [242 kB]
Get: 9 http://deb.debian.org/debian buster/main armhf libmagic1 armhf 1:5.35-4+deb10u1 [110 kB]
Get: 10 http://deb.debian.org/debian buster/main armhf file armhf 1:5.35-4+deb10u1 [65.5 kB]
Get: 11 http://deb.debian.org/debian buster/main armhf gettext-base armhf 0.19.8.1-9 [118 kB]
Get: 12 http://deb.debian.org/debian buster/main armhf libsigsegv2 armhf 2.12-2 [32.1 kB]
Get: 13 http://deb.debian.org/debian buster/main armhf m4 armhf 1.4.18-2 [190 kB]
Get: 14 http://deb.debian.org/debian buster/main armhf autoconf all 2.69-11 [341 kB]
Get: 15 http://deb.debian.org/debian buster/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get: 16 http://deb.debian.org/debian buster/main armhf automake all 1:1.16.1-4 [771 kB]
Get: 17 http://deb.debian.org/debian buster/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get: 18 http://deb.debian.org/debian buster/main armhf libtool all 2.4.6-9 [547 kB]
Get: 19 http://deb.debian.org/debian buster/main armhf dh-autoreconf all 19 [16.9 kB]
Get: 20 http://deb.debian.org/debian buster/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get: 21 http://deb.debian.org/debian buster/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB]
Get: 22 http://deb.debian.org/debian buster/main armhf dh-strip-nondeterminism all 1.1.2-1 [13.0 kB]
Get: 23 http://deb.debian.org/debian buster/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get: 24 http://deb.debian.org/debian buster/main armhf dwz armhf 0.12-3 [72.0 kB]
Get: 25 http://deb.debian.org/debian buster/main armhf libglib2.0-0 armhf 2.58.3-2+deb10u2 [1101 kB]
Get: 26 http://deb.debian.org/debian buster/main armhf libicu63 armhf 63.1-6+deb10u1 [8005 kB]
Get: 27 http://deb.debian.org/debian buster/main armhf libxml2 armhf 2.9.4+dfsg1-7+b3 [595 kB]
Get: 28 http://deb.debian.org/debian buster/main armhf libcroco3 armhf 0.6.12-3 [133 kB]
Get: 29 http://deb.debian.org/debian buster/main armhf libncurses6 armhf 6.1+20181013-2+deb10u2 [79.8 kB]
Get: 30 http://deb.debian.org/debian buster/main armhf gettext armhf 0.19.8.1-9 [1242 kB]
Get: 31 http://deb.debian.org/debian buster/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get: 32 http://deb.debian.org/debian buster/main armhf po-debconf all 1.0.21 [248 kB]
Get: 33 http://deb.debian.org/debian buster/main armhf debhelper all 12.1.1 [1016 kB]
Get: 34 http://deb.debian.org/debian buster/main armhf libgfortran5 armhf 8.3.0-6 [213 kB]
Get: 35 http://deb.debian.org/debian buster/main armhf libgfortran-8-dev armhf 8.3.0-6 [260 kB]
Get: 36 http://deb.debian.org/debian buster/main armhf gfortran-8 armhf 8.3.0-6 [7219 kB]
Get: 37 http://deb.debian.org/debian buster/main armhf gfortran armhf 4:8.3.0-1 [1424 B]
Get: 38 http://deb.debian.org/debian buster/main armhf libpopt0 armhf 1.16-12 [46.3 kB]
Get: 39 http://deb.debian.org/debian buster/main armhf lsb-base all 10.2019051400 [28.4 kB]
Get: 40 http://deb.debian.org/debian buster/main armhf rsync armhf 3.1.3-6 [378 kB]
Fetched 26.4 MB in 7s (3641 kB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package libbsd0:armhf.
(Reading database ...
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(Reading database ... 18932 files and directories currently installed.)
Preparing to unpack .../00-libbsd0_0.9.1-2_armhf.deb ...
Unpacking libbsd0:armhf (0.9.1-2) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../01-bsdmainutils_11.1.2+b1_armhf.deb ...
Unpacking bsdmainutils (11.1.2+b1) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../02-libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../03-groff-base_1.22.4-3_armhf.deb ...
Unpacking groff-base (1.22.4-3) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../04-libpipeline1_1.5.1-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.1-2) ...
Selecting previously unselected package man-db.
Preparing to unpack .../05-man-db_2.8.5-2_armhf.deb ...
Unpacking man-db (2.8.5-2) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../06-sensible-utils_0.0.12_all.deb ...
Unpacking sensible-utils (0.0.12) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../07-libmagic-mgc_1%3a5.35-4+deb10u1_armhf.deb ...
Unpacking libmagic-mgc (1:5.35-4+deb10u1) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../08-libmagic1_1%3a5.35-4+deb10u1_armhf.deb ...
Unpacking libmagic1:armhf (1:5.35-4+deb10u1) ...
Selecting previously unselected package file.
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update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
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invoke-rc.d: could not determine current runlevel
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Processing triggers for libc-bin (2.28-10) ...
Reading package lists...
Building dependency tree...
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-> Finished parsing the build-deps
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Building dependency tree...
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fakeroot is already the newest version (1.23-1).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
I: Building the package
I: Running cd /build/profnet-1.0.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b
dpkg-buildpackage: info: source package profnet
dpkg-buildpackage: info: source version 1.0.22-6
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_auto_clean
make -j3 distclean
make[1]: Entering directory '/build/profnet-1.0.22'
make -C src clean
rm -rf bval_dir
rm -rf chop_dir
make[2]: Entering directory '/build/profnet-1.0.22/src'
rm -f *.o profnet_prof
rm -rf con_dir
rm -rf isis_dir
rm -rf md_dir
rm -rf norsnet_dir
make[2]: Leaving directory '/build/profnet-1.0.22/src'
make -C src-phd clean
rm -rf prof_dir
rm -rf snapfun_dir
make[2]: Entering directory '/build/profnet-1.0.22/src-phd'
rm -f *.o profphd_net
make[2]: Leaving directory '/build/profnet-1.0.22/src-phd'
rm -f *.[0123456789].gz
rm -rf\
profnet-1.0.22 \
profnet-1.0.22.tar.gz
make[1]: Leaving directory '/build/profnet-1.0.22'
dh_clean
debian/rules build
dh build
dh_update_autotools_config
dh_autoreconf
dh_auto_configure
debian/rules override_dh_auto_build
make[1]: Entering directory '/build/profnet-1.0.22'
make patch
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p bval_dir && rsync -avC src/. ./bval_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,282 bytes received 532 bytes 247,209.33 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d bval_dir < bval.patch && touch bval_dir/patch_stamp
patching file Makefile
patching file prof.f
patching file profPar.f
mkdir -p chop_dir && rsync -avC src/. ./chop_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,282 bytes received 532 bytes 741,628.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d chop_dir < chop.patch && touch chop_dir/patch_stamp
patching file Makefile
Hunk #1 succeeded at 1 with fuzz 1.
mkdir -p con_dir && rsync -avC src/. ./con_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,282 bytes received 532 bytes 741,628.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d con_dir < con.patch && touch con_dir/patch_stamp
patching file Makefile
Hunk #1 succeeded at 1 with fuzz 1.
patching file profPar.f
mkdir -p isis_dir && rsync -avC src/. ./isis_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,282 bytes received 532 bytes 741,628.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d isis_dir < isis.patch && touch isis_dir/patch_stamp
patching file Makefile
Hunk #1 succeeded at 1 with fuzz 1.
patching file profPar.f
mkdir -p md_dir && rsync -avC src/. ./md_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,282 bytes received 532 bytes 741,628.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d md_dir < md.patch && touch md_dir/patch_stamp
patching file Makefile
patching file prof.f
patching file profPar.f
mkdir -p norsnet_dir && rsync -avC src/. ./norsnet_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,282 bytes received 532 bytes 741,628.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d norsnet_dir < norsnet.patch && touch norsnet_dir/patch_stamp
patching file Makefile
patching file prof.f
patching file profPar.f
mkdir -p prof_dir && rsync -avC src/. ./prof_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,282 bytes received 532 bytes 741,628.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d prof_dir < prof.patch && touch prof_dir/patch_stamp
mkdir -p snapfun_dir && rsync -avC src/. ./snapfun_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,282 bytes received 532 bytes 741,628.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d snapfun_dir < snapfun.patch && touch snapfun_dir/patch_stamp
patching file Makefile
patching file Makefile.orig
patching file profPar.f
make[2]: Leaving directory '/build/profnet-1.0.22'
make CFLAGS="-g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now"
make[2]: Entering directory '/build/profnet-1.0.22'
make -C bval_dir
make[3]: Entering directory '/build/profnet-1.0.22/bval_dir'
--- making profnet_bval
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_bval prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
prof.f:527:28:
ERRBINSTOP= 0.95
1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
CALL RDPAR_ERR('NUMIN',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1) [-Wargument-mismatch]
prof.f:1856:24:
CALL RDPAR_ERR('NUMHID',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1859:24:
CALL RDPAR_ERR('NUMOUT',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1864:24:
CALL RDPAR_ERR('NUMSAM',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1870:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1873:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1876:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1879:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1885:24:
CALL RDPAR_ERR('STPSWPMAX',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1) [-Wargument-mismatch]
prof.f:1888:24:
CALL RDPAR_ERR('STPMAX',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1891:24:
CALL RDPAR_ERR('STPINF',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1334:45:
SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/bval_dir'
make -C chop_dir
make[3]: Entering directory '/build/profnet-1.0.22/chop_dir'
--- making profnet_chop
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_chop prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
prof.f:527:28:
ERRBINSTOP= 0.95
1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
CALL RDPAR_ERR('NUMIN ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1856:24:
CALL RDPAR_ERR('NUMHID ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1859:24:
CALL RDPAR_ERR('NUMOUT ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1864:24:
CALL RDPAR_ERR('NUMSAM ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1870:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1873:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1876:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1879:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1885:24:
CALL RDPAR_ERR('STPSWPMAX ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) [-Wargument-mismatch]
prof.f:1888:24:
CALL RDPAR_ERR('STPMAX ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1891:24:
CALL RDPAR_ERR('STPINF ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1334:45:
SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/chop_dir'
make -C con_dir
make[3]: Entering directory '/build/profnet-1.0.22/con_dir'
--- making profnet_con
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_con prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
prof.f:527:28:
ERRBINSTOP= 0.95
1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
CALL RDPAR_ERR('NUMIN ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1856:24:
CALL RDPAR_ERR('NUMHID ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1859:24:
CALL RDPAR_ERR('NUMOUT ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1864:24:
CALL RDPAR_ERR('NUMSAM ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1870:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1873:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1876:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1879:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1885:24:
CALL RDPAR_ERR('STPSWPMAX ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) [-Wargument-mismatch]
prof.f:1888:24:
CALL RDPAR_ERR('STPMAX ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1891:24:
CALL RDPAR_ERR('STPINF ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1334:45:
SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/con_dir'
make -C isis_dir
make[3]: Entering directory '/build/profnet-1.0.22/isis_dir'
--- making profnet_isis
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_isis prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
prof.f:527:28:
ERRBINSTOP= 0.95
1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
CALL RDPAR_ERR('NUMIN ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1856:24:
CALL RDPAR_ERR('NUMHID ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1859:24:
CALL RDPAR_ERR('NUMOUT ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1864:24:
CALL RDPAR_ERR('NUMSAM ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1870:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1873:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1876:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1879:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1885:24:
CALL RDPAR_ERR('STPSWPMAX ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) [-Wargument-mismatch]
prof.f:1888:24:
CALL RDPAR_ERR('STPMAX ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1891:24:
CALL RDPAR_ERR('STPINF ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1334:45:
SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/isis_dir'
make -C md_dir
make[3]: Entering directory '/build/profnet-1.0.22/md_dir'
--- making profnet_md
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_md prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
prof.f:527:28:
ERRBINSTOP= 0.95
1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
CALL RDPAR_ERR('NUMIN',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1) [-Wargument-mismatch]
prof.f:1856:24:
CALL RDPAR_ERR('NUMHID',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1859:24:
CALL RDPAR_ERR('NUMOUT',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1864:24:
CALL RDPAR_ERR('NUMSAM',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1870:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1873:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1876:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1879:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1885:24:
CALL RDPAR_ERR('STPSWPMAX',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1) [-Wargument-mismatch]
prof.f:1888:24:
CALL RDPAR_ERR('STPMAX',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1891:24:
CALL RDPAR_ERR('STPINF',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1334:45:
SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/md_dir'
make -C norsnet_dir
make[3]: Entering directory '/build/profnet-1.0.22/norsnet_dir'
--- making profnet_norsnet
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_norsnet prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
prof.f:527:28:
ERRBINSTOP= 0.95
1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
CALL RDPAR_ERR('NUMIN',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1) [-Wargument-mismatch]
prof.f:1856:24:
CALL RDPAR_ERR('NUMHID',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1859:24:
CALL RDPAR_ERR('NUMOUT',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1864:24:
CALL RDPAR_ERR('NUMSAM',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1870:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1873:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1876:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1879:24:
CALL RDPAR_ERR(HC,VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) [-Wargument-mismatch]
prof.f:1885:24:
CALL RDPAR_ERR('STPSWPMAX',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1) [-Wargument-mismatch]
prof.f:1888:24:
CALL RDPAR_ERR('STPMAX',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1891:24:
CALL RDPAR_ERR('STPINF',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1334:45:
SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/norsnet_dir'
make -C prof_dir
make[3]: Entering directory '/build/profnet-1.0.22/prof_dir'
--- making profnet_prof
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_prof prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
prof.f:527:28:
ERRBINSTOP= 0.95
1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
CALL RDPAR_ERR('NUMIN ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1856:24:
CALL RDPAR_ERR('NUMHID ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1859:24:
CALL RDPAR_ERR('NUMOUT ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1864:24:
CALL RDPAR_ERR('NUMSAM ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1870:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1873:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1876:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1879:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1885:24:
CALL RDPAR_ERR('STPSWPMAX ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) [-Wargument-mismatch]
prof.f:1888:24:
CALL RDPAR_ERR('STPMAX ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1891:24:
CALL RDPAR_ERR('STPINF ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1334:45:
SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/prof_dir'
make -C snapfun_dir
make[3]: Entering directory '/build/profnet-1.0.22/snapfun_dir'
--- making profnet_snapfun
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_snapfun prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
prof.f:527:28:
ERRBINSTOP= 0.95
1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
CALL RDPAR_ERR('NUMIN ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) [-Wargument-mismatch]
prof.f:1856:24:
CALL RDPAR_ERR('NUMHID ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1859:24:
CALL RDPAR_ERR('NUMOUT ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1864:24:
CALL RDPAR_ERR('NUMSAM ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1870:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1873:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1876:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1879:24:
CALL RDPAR_ERR(HC // ' ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) [-Wargument-mismatch]
prof.f:1885:24:
CALL RDPAR_ERR('STPSWPMAX ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) [-Wargument-mismatch]
prof.f:1888:24:
CALL RDPAR_ERR('STPMAX ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1891:24:
CALL RDPAR_ERR('STPINF ',VARIN)
1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) [-Wargument-mismatch]
prof.f:1334:45:
SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/snapfun_dir'
pod2man -c 'User Commands' -r "1.0.22-" profnet.pod | gzip -c > profnet.1.gz
profnet.pod around line 27: Expected text after =item, not a number
profnet.pod around line 31: Expected text after =item, not a number
profnet.pod around line 35: Expected text after =item, not a number
profnet.pod around line 39: Expected text after =item, not a number
profnet.pod around line 43: Expected text after =item, not a number
profnet.pod around line 47: Expected text after =item, not a number
profnet.pod around line 51: Expected text after =item, not a number
profnet.pod around line 55: Expected text after =item, not a number
profnet.pod around line 59: Expected text after =item, not a number
profnet.pod around line 63: Expected text after =item, not a number
POD document had syntax errors at /usr/bin/pod2man line 71.
make -C src-phd
make[3]: Entering directory '/build/profnet-1.0.22/src-phd'
gfortran -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fbounds-check -Wall -Wl,-z,relro -Wl,-z,now -o profphd_net phd.f lib-phd.f
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
phd.f:8107:5:
19991 CONTINUE
1
Warning: Label 19991 at (1) defined but not used [-Wunused-label]
phd.f:1437:40:
CHARACTER*1 FC_REXP_TO_3STCHAR,FC_REXPI_TO_3STCHAR
1
Warning: Unused variable 'fc_rexp_to_3stchar' declared at (1) [-Wunused-variable]
phd.f:3923:30:
+ ACC,NOCC,VAR,ALISEQ,ALIPOINTER,
1
Warning: Unused dummy argument 'aliseq' at (1) [-Wunused-dummy-argument]
phd.f:3922:58:
+ PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2,
1
Warning: Unused dummy argument 'bp1' at (1) [-Wunused-dummy-argument]
phd.f:3922:62:
+ PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2,
1
Warning: Unused dummy argument 'bp2' at (1) [-Wunused-dummy-argument]
phd.f:3924:36:
+ SEQPROF,NDEL,NINS,ENTROPY,RELENT,CONSWEIGHT,
1
Warning: Unused dummy argument 'entropy' at (1) [-Wunused-dummy-argument]
phd.f:3916:31:
+ MAXRES,MAXALIGNS_LOC,MAXCORE_LOC,
1
Warning: Unused dummy argument 'maxaligns_loc' at (1) [-Wunused-dummy-argument]
phd.f:3916:43:
+ MAXRES,MAXALIGNS_LOC,MAXCORE_LOC,
1
Warning: Unused dummy argument 'maxcore_loc' at (1) [-Wunused-dummy-argument]
phd.f:3916:17:
+ MAXRES,MAXALIGNS_LOC,MAXCORE_LOC,
1
Warning: Unused dummy argument 'maxres' at (1) [-Wunused-dummy-argument]
phd.f:3924:43:
+ SEQPROF,NDEL,NINS,ENTROPY,RELENT,CONSWEIGHT,
1
Warning: Unused dummy argument 'relent' at (1) [-Wunused-dummy-argument]
phd.f:3922:54:
+ PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2,
1
Warning: Unused dummy argument 'sheetlabel' at (1) [-Wunused-dummy-argument]
phd.f:3923:23:
+ ACC,NOCC,VAR,ALISEQ,ALIPOINTER,
1
Warning: Unused dummy argument 'var' at (1) [-Wunused-dummy-argument]
phd.f:64:41:
REAL TIME0,FRTIME_SECNDS
1
Warning: Unused variable 'frtime_secnds' declared at (1) [-Wunused-variable]
f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/src-phd'
make[2]: Leaving directory '/build/profnet-1.0.22'
make[1]: Leaving directory '/build/profnet-1.0.22'
dh_auto_test
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary
dh binary
dh_testroot
dh_prep
debian/rules override_dh_auto_install
make[1]: Entering directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-bval prefix=/usr install-bval
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-bval/usr/bin && \
cp -a bval_dir/profnet_bval \
/build/profnet-1.0.22/debian/profnet-bval/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-bval/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-bval/usr/share/man/man1/profnet_bval.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-chop prefix=/usr install-chop
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-chop/usr/bin && \
cp -a chop_dir/profnet_chop \
/build/profnet-1.0.22/debian/profnet-chop/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-chop/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-chop/usr/share/man/man1/profnet_chop.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-con prefix=/usr install-con
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-con/usr/bin && \
cp -a con_dir/profnet_con \
/build/profnet-1.0.22/debian/profnet-con/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-con/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-con/usr/share/man/man1/profnet_con.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-isis prefix=/usr install-isis
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-isis/usr/bin && \
cp -a isis_dir/profnet_isis \
/build/profnet-1.0.22/debian/profnet-isis/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-isis/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-isis/usr/share/man/man1/profnet_isis.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-md prefix=/usr install-md
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-md/usr/bin && \
cp -a md_dir/profnet_md \
/build/profnet-1.0.22/debian/profnet-md/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-md/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-md/usr/share/man/man1/profnet_md.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-norsnet prefix=/usr install-norsnet
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-norsnet/usr/bin && \
cp -a norsnet_dir/profnet_norsnet \
/build/profnet-1.0.22/debian/profnet-norsnet/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-norsnet/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-norsnet/usr/share/man/man1/profnet_norsnet.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-prof prefix=/usr install-prof
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-prof/usr/bin && \
cp -a prof_dir/profnet_prof \
/build/profnet-1.0.22/debian/profnet-prof/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-prof/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-prof/usr/share/man/man1/profnet_prof.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-snapfun prefix=/usr install-snapfun
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-snapfun/usr/bin && \
cp -a snapfun_dir/profnet_snapfun \
/build/profnet-1.0.22/debian/profnet-snapfun/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-snapfun/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-snapfun/usr/share/man/man1/profnet_snapfun.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profphd-net prefix=/usr install-phd
make[2]: Entering directory '/build/profnet-1.0.22'
/usr/bin/make -C src-phd install
make[3]: Entering directory '/build/profnet-1.0.22/src-phd'
mkdir -p /build/profnet-1.0.22/debian/profphd-net/usr/bin && \
cp profphd_net /build/profnet-1.0.22/debian/profphd-net/usr/bin/
rm -f /build/profnet-1.0.22/debian/profphd-net/usr/bin/phd1994 && ln -s profphd_net /build/profnet-1.0.22/debian/profphd-net/usr/bin/phd1994
make[3]: Leaving directory '/build/profnet-1.0.22/src-phd'
mkdir -p /build/profnet-1.0.22/debian/profphd-net/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profphd-net/usr/share/man/man1/profphd_net.1.gz
rm -f /build/profnet-1.0.22/debian/profphd-net/usr/share/man/man1/phd1994.1.gz && ln -s profphd_net.1.gz /build/profnet-1.0.22/debian/profphd-net/usr/share/man/man1/phd1994.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
make[1]: Leaving directory '/build/profnet-1.0.22'
dh_installdocs
dh_installchangelogs
dh_installexamples
dh_installman
dh_perl
dh_link
dh_strip_nondeterminism
dh_compress
dh_fixperms
dh_missing
dh_strip
dh_makeshlibs
debian/rules override_dh_shlibdeps
make[1]: Entering directory '/build/profnet-1.0.22'
dh_shlibdeps
# sneak in common part of package descriptions
for i in $(sed -n '/^Package: / s///p' debian/control); do \
cat debian/Description >> debian/$i.substvars; \
done;
make[1]: Leaving directory '/build/profnet-1.0.22'
dh_installdeb
dh_gencontrol
dpkg-gencontrol: warning: package profnet-prof: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-isis: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-bval: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-snapfun: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-md: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-chop: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profphd-net: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-norsnet: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-con: substitution variable ${Description} unused, but is defined
dh_md5sums
dh_builddeb
dpkg-deb: building package 'profnet-isis' in '../profnet-isis_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-bval' in '../profnet-bval_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-prof' in '../profnet-prof_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-bval-dbgsym' in '../profnet-bval-dbgsym_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-isis-dbgsym' in '../profnet-isis-dbgsym_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-prof-dbgsym' in '../profnet-prof-dbgsym_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-chop' in '../profnet-chop_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-snapfun' in '../profnet-snapfun_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-md' in '../profnet-md_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-chop-dbgsym' in '../profnet-chop-dbgsym_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-md-dbgsym' in '../profnet-md-dbgsym_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-snapfun-dbgsym' in '../profnet-snapfun-dbgsym_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-con' in '../profnet-con_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-norsnet' in '../profnet-norsnet_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profphd-net' in '../profphd-net_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-con-dbgsym' in '../profnet-con-dbgsym_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profnet-norsnet-dbgsym' in '../profnet-norsnet-dbgsym_1.0.22-6_armhf.deb'.
dpkg-deb: building package 'profphd-net-dbgsym' in '../profphd-net-dbgsym_1.0.22-6_armhf.deb'.
dpkg-genbuildinfo --build=binary
dpkg-genchanges --build=binary >../profnet_1.0.22-6_armhf.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/2082 and its subdirectories
I: Current time: Wed Sep 2 08:35:24 -12 2020
I: pbuilder-time-stamp: 1599078924
Wed Sep 2 20:35:38 UTC 2020 I: 1st build successful. Starting 2nd build on remote node wbq0-armhf-rb.debian.net.
Wed Sep 2 20:35:38 UTC 2020 I: Preparing to do remote build '2' on wbq0-armhf-rb.debian.net.
Wed Sep 2 20:42:33 UTC 2020 I: Deleting $TMPDIR on wbq0-armhf-rb.debian.net.
Wed Sep 2 20:42:36 UTC 2020 I: profnet_1.0.22-6_armhf.changes:
Format: 1.8
Date: Tue, 23 Oct 2018 19:36:35 +0200
Source: profnet
Binary: profnet-bval profnet-bval-dbgsym profnet-chop profnet-chop-dbgsym profnet-con profnet-con-dbgsym profnet-isis profnet-isis-dbgsym profnet-md profnet-md-dbgsym profnet-norsnet profnet-norsnet-dbgsym profnet-prof profnet-prof-dbgsym profnet-snapfun profnet-snapfun-dbgsym profphd-net profphd-net-dbgsym
Architecture: armhf
Version: 1.0.22-6
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
profnet-bval - neural network architecture for profbval
profnet-chop - neural network architecture for profchop
profnet-con - neural network architecture for profcon
profnet-isis - neural network architecture for profisis
profnet-md - neural network architecture for metadisorder
profnet-norsnet - neural network architecture for norsnet
profnet-prof - neural network architecture for profacc
profnet-snapfun - neural network architecture for snapfun
profphd-net - neural network architecture for profphd
Changes:
profnet (1.0.22-6) unstable; urgency=medium
.
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
Checksums-Sha1:
096bec40e8eb6ceedce9dd8e1f0aa8f9132ee074 57416 profnet-bval-dbgsym_1.0.22-6_armhf.deb
00c10ceed2b147e2a1ebcfecd3e4c6984ae13afc 44796 profnet-bval_1.0.22-6_armhf.deb
8a70676bea2c26087e4362caa8240bb74461de4c 57260 profnet-chop-dbgsym_1.0.22-6_armhf.deb
a93cacecf78bfc20e85e4f88b0e81cf3f890c4b3 106140 profnet-chop_1.0.22-6_armhf.deb
4a2af34a65a70168e4ca6430e987fbb9b2a0c9a2 57316 profnet-con-dbgsym_1.0.22-6_armhf.deb
f47239b3fcddfe95e708aa9869cb33eebffd920e 106220 profnet-con_1.0.22-6_armhf.deb
ed1632348b50cf3926f5e7819ee4f0f4b466d3bb 57184 profnet-isis-dbgsym_1.0.22-6_armhf.deb
1fd64fe7533f593751f58ef2a41b2d0879c9e2de 106160 profnet-isis_1.0.22-6_armhf.deb
97ca7b8356ac67520c6ca6335c82230aae37ca8c 57452 profnet-md-dbgsym_1.0.22-6_armhf.deb
5306a99743ff3f2829e9bcaf0f5063ee4003e023 44028 profnet-md_1.0.22-6_armhf.deb
f041411c4725e47c2ef3cf38596ede6cda9c9f64 57444 profnet-norsnet-dbgsym_1.0.22-6_armhf.deb
96d105d2bf9b97010fedeb4e5794d53ed47f3c42 43992 profnet-norsnet_1.0.22-6_armhf.deb
17b066c4c681c7b010b3fe06c5801384dbbfa98d 57308 profnet-prof-dbgsym_1.0.22-6_armhf.deb
95a380fddd24cd50d140b5bc6339c1cb0f112ace 106132 profnet-prof_1.0.22-6_armhf.deb
1c70fdde344d55d415f0f1221f3393098e51f4b8 57452 profnet-snapfun-dbgsym_1.0.22-6_armhf.deb
ed163168b0540e0ca542a4f50985220003953c72 106228 profnet-snapfun_1.0.22-6_armhf.deb
e8e3176a1d77908c350461afb53f36bfe451859c 9128 profnet_1.0.22-6_armhf.buildinfo
2b77a0541dfde1cd928d39c700484809bb745372 183492 profphd-net-dbgsym_1.0.22-6_armhf.deb
c965c1c03179e63aef6045a617f41d9859c719f2 144112 profphd-net_1.0.22-6_armhf.deb
Checksums-Sha256:
d6c9565c3a1e4d78c3ec28b64bd7fd1c0600306ab06311e294b7350210af3b8d 57416 profnet-bval-dbgsym_1.0.22-6_armhf.deb
aa6456c5176b2df14acfd3c4cc24acfbeea2265c8d56e415baef033789ad0036 44796 profnet-bval_1.0.22-6_armhf.deb
d798f4129b3d64114a9c2acb6e887fdba1c81983e79d6dd0b793ce437d223413 57260 profnet-chop-dbgsym_1.0.22-6_armhf.deb
4da3de5a8fa8459c6a0dd1615e5072388de7b1cf8fb7f96433abf691beb33223 106140 profnet-chop_1.0.22-6_armhf.deb
034d067b48091c1ce59abcbff80f3e6ab518cbecbb4eb681ccc3568e675b81ef 57316 profnet-con-dbgsym_1.0.22-6_armhf.deb
5bfd08da034d360dbadbc275a9d61df454d2342169e2f3f8d2b8ba0b8c6a52b0 106220 profnet-con_1.0.22-6_armhf.deb
80b6b72b059be98ebe96828c20c158faaae3976fdee00d92b5a4080f4e31b49d 57184 profnet-isis-dbgsym_1.0.22-6_armhf.deb
3c5c77f0324ca970da52b1fdba310bbb310385920fdb681337e2ace55002ef18 106160 profnet-isis_1.0.22-6_armhf.deb
a1f262bd9faeccf0b75f994a9a9209c0da5081c5922c7742ad2e84f0f46eda98 57452 profnet-md-dbgsym_1.0.22-6_armhf.deb
fdfe488470cc65e259ef702d4947a086c06dc8706864deb3e879b893d301baf6 44028 profnet-md_1.0.22-6_armhf.deb
c8e2d9a8015f1f9ff45d641f41632022202e1888bbc19a219bd16038fc8a27da 57444 profnet-norsnet-dbgsym_1.0.22-6_armhf.deb
861ad70d3c13db4f2f47cb855199b7d6d7aa6b7afad98fad3cab4d2d98e089b9 43992 profnet-norsnet_1.0.22-6_armhf.deb
0f19f68fe417a344715b306b9cbb77e91ef6927e337f2089f5e143f5104d0902 57308 profnet-prof-dbgsym_1.0.22-6_armhf.deb
977e1a0922428353fbe548e1183aa1e4676e825b07c9868172989f7746adcd1d 106132 profnet-prof_1.0.22-6_armhf.deb
763088fb2c0c93505db890507738ab6f2660ebed662866020c42c1b751999370 57452 profnet-snapfun-dbgsym_1.0.22-6_armhf.deb
75c7c6ec3d3f7991d4f03eddf7109e2f42ef4df5356c84277737d93b55e475d7 106228 profnet-snapfun_1.0.22-6_armhf.deb
b94ad976d1925288a4ef3f2864c2ccd10e1873c5f069d82075d3014ebafce066 9128 profnet_1.0.22-6_armhf.buildinfo
fd461d188134e3060df4e41d19b84533ac94b10a0ad7c2dd6dc9927c0fd9ee13 183492 profphd-net-dbgsym_1.0.22-6_armhf.deb
545ad79ee88efa7282294763032a2147629cf6e9706e7fda675327bda1b1566e 144112 profphd-net_1.0.22-6_armhf.deb
Files:
14a353aa579b59caa205195477d5c757 57416 debug optional profnet-bval-dbgsym_1.0.22-6_armhf.deb
3d54fbe9d13beb712a8ff3c5803f56ef 44796 science optional profnet-bval_1.0.22-6_armhf.deb
47c67a2cc0018cbd0df3dc508d46a42b 57260 debug optional profnet-chop-dbgsym_1.0.22-6_armhf.deb
2d6bfcb175a89e32cf70d9f1b2247798 106140 science optional profnet-chop_1.0.22-6_armhf.deb
1b813eea310fcd78663e08724ae1c2a5 57316 debug optional profnet-con-dbgsym_1.0.22-6_armhf.deb
1173618170d4f937ad5d9b7de530ea5c 106220 science optional profnet-con_1.0.22-6_armhf.deb
16e17a32a00347f5d28b50776d048f2c 57184 debug optional profnet-isis-dbgsym_1.0.22-6_armhf.deb
796c93ee02d8b00f43ba5b0f8a73d61b 106160 science optional profnet-isis_1.0.22-6_armhf.deb
cb2519f800ebff915d2902f694429d9f 57452 debug optional profnet-md-dbgsym_1.0.22-6_armhf.deb
ada30d9d9b531c5b1e3e54fa789bb6fb 44028 science optional profnet-md_1.0.22-6_armhf.deb
c64564e62f203d1d3e184c2f9d8c4f71 57444 debug optional profnet-norsnet-dbgsym_1.0.22-6_armhf.deb
8b5fbff7dd646feb86b1d50448ceb793 43992 science optional profnet-norsnet_1.0.22-6_armhf.deb
a27bc43c7e0d623e0db7883c160e558a 57308 debug optional profnet-prof-dbgsym_1.0.22-6_armhf.deb
a4242a38c1f5b9fd2878ae20d8e9325a 106132 science optional profnet-prof_1.0.22-6_armhf.deb
99e6247abb7c588171232a6be235d20d 57452 debug optional profnet-snapfun-dbgsym_1.0.22-6_armhf.deb
7e8832650330506581e6d0102e3845b6 106228 science optional profnet-snapfun_1.0.22-6_armhf.deb
9c74148ca5db9773f883370d77f10ed6 9128 science optional profnet_1.0.22-6_armhf.buildinfo
7040162735b5fb4604614f12e694986d 183492 debug optional profphd-net-dbgsym_1.0.22-6_armhf.deb
2d447bb6fa14d5878b0a55a330290651 144112 science optional profphd-net_1.0.22-6_armhf.deb
Wed Sep 2 20:42:48 UTC 2020 I: diffoscope 158 will be used to compare the two builds:
# Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.ZLrkS3xLZ1/profnet_1.0.22-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.ZLrkS3xLZ1/profnet_1.0.22-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.ZLrkS3xLZ1/profnet_1.0.22-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.ZLrkS3xLZ1/b1/profnet_1.0.22-6_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.ZLrkS3xLZ1/b2/profnet_1.0.22-6_armhf.changes
## command (total time: 0.000s)
0.000s 1 call cmp (internal)
## has_same_content_as (total time: 0.000s)
0.000s 1 call abc.DotChangesFile
## main (total time: 0.405s)
0.405s 2 calls outputs
0.000s 1 call cleanup
## recognizes (total time: 0.059s)
0.059s 10 calls diffoscope.comparators.binary.FilesystemFile
0.000s 8 calls abc.DotChangesFile
Wed Sep 2 20:57:17 UTC 2020 I: diffoscope 158 found no differences in the changes files, and a .buildinfo file also exists.
Wed Sep 2 20:57:17 UTC 2020 I: profnet from buster built successfully and reproducibly on armhf.
Wed Sep 2 20:57:21 UTC 2020 I: Submitting .buildinfo files to external archives:
Wed Sep 2 20:57:21 UTC 2020 I: Submitting 12K b1/profnet_1.0.22-6_armhf.buildinfo.asc
Wed Sep 2 20:57:22 UTC 2020 I: Submitting 12K b2/profnet_1.0.22-6_armhf.buildinfo.asc
Wed Sep 2 20:57:24 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit.
Wed Sep 2 20:57:24 UTC 2020 I: Done submitting .buildinfo files.
Wed Sep 2 20:57:24 UTC 2020 I: Removing signed profnet_1.0.22-6_armhf.buildinfo.asc files:
removed './b1/profnet_1.0.22-6_armhf.buildinfo.asc'
removed './b2/profnet_1.0.22-6_armhf.buildinfo.asc'