Wed Sep 1 10:34:15 UTC 2021 I: starting to build bagel/buster/i386 on jenkins on '2021-09-01 10:34' Wed Sep 1 10:34:15 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_15/18996/console.log Wed Sep 1 10:34:15 UTC 2021 I: Downloading source for buster/bagel=1.2.2-1 --2021-09-01 10:34:15-- http://deb.debian.org/debian/pool/main/b/bagel/bagel_1.2.2-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2085 (2.0K) Saving to: ‘bagel_1.2.2-1.dsc’ 0K .. 100% 129M=0s 2021-09-01 10:34:15 (129 MB/s) - ‘bagel_1.2.2-1.dsc’ saved [2085/2085] Wed Sep 1 10:34:16 UTC 2021 I: bagel_1.2.2-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: bagel Binary: bagel Architecture: any Version: 1.2.2-1 Maintainer: Debichem Team Uploaders: Michael Banck , Graham Inggs Homepage: http://www.nubakery.org/ Standards-Version: 3.9.8 Vcs-Browser: https://salsa.debian.org/debichem-team/bagel Vcs-Git: https://salsa.debian.org/debichem-team/bagel.git Testsuite: autopkgtest Build-Depends: debhelper (>= 9), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python-dev Package-List: bagel deb science optional arch=any Checksums-Sha1: e54adbfca037d1c7beaf52c0a8ffb0d0bb9f8696 41551016 bagel_1.2.2.orig.tar.gz 2982344d141d62b42f3cabb514922ff60f02330b 7024 bagel_1.2.2-1.debian.tar.xz Checksums-Sha256: b9ef9ad5ad9b836b5393badb5a3e5b162d6ff32da497f69d05ef9e4d091b558a 41551016 bagel_1.2.2.orig.tar.gz 2951c7df5551e867ab95589e416575d9cd3e88ff0e1f131ef14955ee874a7658 7024 bagel_1.2.2-1.debian.tar.xz Files: 5dd54b064188771ccf6dd19fe08204da 41551016 bagel_1.2.2.orig.tar.gz 423c87bee53313880bd49a41ed5b8b30 7024 bagel_1.2.2-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEnKh3dJ+rLk+paGLs3GhqJ7Q0gbAFAlwrTPMACgkQ3GhqJ7Q0 gbAoHg//dEbN+Cvh/IjPVz1FMRApWgnxELfZksycG4WVmUlAOsI4D4MEGVIJJP3F fV4lJKqxzOOchokArseUAiHHErxcpZ5jD+beCJnneh22WIrlbXuDua6V/ttmFx2B b9UlQhHITBaAJUSYAidX+uRrDhYJ1tvRDziFWs6fs0+12AKAEdPqIxjMtkDE1EmQ YNEHKwByWRew9y6CNVUCuFv8QVAoE67q0EDyR4HmgoOYP4raLdBf5PniMK+Ru5Ov XrTC4Ms1sgLAYnFmYUG9dnFMvsJf8cUvmnbXPnFnQKhLrQq4DHp6NkC4UvWluWox 7CSK9EccHKh2cYSpqx5JutQk3QTC5jEBn9QLAzRNQttbF8yyUC2UvK4h3sOe+A4E DBERwMDamFvIfb+a/M/sINPlJQwlv5XCpQtp9WHygNrI+e4OwbrfyIzBqUvaxDq+ Cqz7kO0CN7ArlRNZZ/nkUlNrTk5GgmT0NIrsSZfLxs7XzlhEzW1SswT0n2oNoPzn 2JJWABdi1pylMQ3rRRFCYyHf3B6T8Eo38RAK30p0TH+iljE5MPl7ty9mgNk/wFIG lnNyvKBsOIYvQazriu9SqDwRI/4FGRItYobbv4RpcNH30oCbewVwZa/9/8V6Zdh2 N1Nh9FBasHC78LobHPwyl2Ajx0YCxwH83jbuIgrsFNnrCL2grpE= =tSNv -----END PGP SIGNATURE----- Wed Sep 1 10:34:16 UTC 2021 I: Checking whether the package is not for us Wed Sep 1 10:34:16 UTC 2021 I: Starting 1st build on remote node ionos12-i386.debian.net. Wed Sep 1 10:34:16 UTC 2021 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Wed Sep 1 10:35:56 UTC 2021 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Aug 31 22:34:18 -12 2021 I: pbuilder-time-stamp: 1630492458 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [bagel_1.2.2-1.dsc] I: copying [./bagel_1.2.2.orig.tar.gz] I: copying [./bagel_1.2.2-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Dec 31 23:20:19 2018 -12 gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./bagel_1.2.2-1.dsc dpkg-source: info: extracting bagel in bagel-1.2.2 dpkg-source: info: unpacking bagel_1.2.2.orig.tar.gz dpkg-source: info: unpacking bagel_1.2.2-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying skip_failing_testcases.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/32441/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='5d88b97340134a5f9cb0a75fce682358' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='32441' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.I1j4zjd3Es/pbuilderrc_pPIn --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.I1j4zjd3Es/b1 --logfile b1/build.log bagel_1.2.2-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos12-i386 5.10.0-8-686-pae #1 SMP Debian 5.10.46-4 (2021-08-03) i686 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1302248 Apr 17 2019 bash -rwxr-xr-x 3 root root 38280 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 17768 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 38692 Feb 28 2019 cat -rwxr-xr-x 1 root root 75588 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 63268 Feb 28 2019 chmod -rwxr-xr-x 1 root root 75588 Feb 28 2019 chown -rwxr-xr-x 1 root root 153732 Feb 28 2019 cp -rwxr-xr-x 1 root root 132820 Jan 17 2019 dash -rwxr-xr-x 1 root root 120676 Feb 28 2019 date -rwxr-xr-x 1 root root 92040 Feb 28 2019 dd -rwxr-xr-x 1 root root 100620 Feb 28 2019 df -rwxr-xr-x 1 root root 149736 Feb 28 2019 dir -rwxr-xr-x 1 root root 79412 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 34532 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 34532 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 67700 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 30112 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 206392 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 100952 Jan 5 2019 gzip -rwxr-xr-x 1 root root 21916 Sep 26 2018 hostname -rwxr-xr-x 1 root root 79752 Feb 28 2019 ln -rwxr-xr-x 1 root root 55400 Jul 26 2018 login -rwxr-xr-x 1 root root 149736 Feb 28 2019 ls -rwxr-xr-x 1 root root 112032 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 87972 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 79748 Feb 28 2019 mknod -rwxr-xr-x 1 root root 46916 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 42348 Jan 9 2019 more -rwsr-xr-x 1 root root 50592 Jan 9 2019 mount -rwxr-xr-x 1 root root 13724 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 157832 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38660 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 46852 Feb 28 2019 readlink -rwxr-xr-x 1 root root 75588 Feb 28 2019 rm -rwxr-xr-x 1 root root 42756 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 22276 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 6 20:26 sh -> dash -rwxr-xr-x 1 root root 34532 Feb 28 2019 sleep -rwxr-xr-x 1 root root 79652 Feb 28 2019 stty -rwsr-xr-x 1 root root 71072 Jan 9 2019 su -rwxr-xr-x 1 root root 34564 Feb 28 2019 sync -rwxr-xr-x 1 root root 504024 Apr 23 2019 tar -rwxr-xr-x 1 root root 13860 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 104292 Feb 28 2019 touch -rwxr-xr-x 1 root root 34532 Feb 28 2019 true -rwxr-xr-x 1 root root 17768 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 30108 Jan 9 2019 umount -rwxr-xr-x 1 root root 34532 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 149736 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34208 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/32441/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 9), dh-autoreconf, libblas-dev, libboost-python-dev, libboost-regex-dev, libboost-serialization-dev, libboost-test-dev, liblapack-dev, libmpich-dev, libxc-dev, python-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 9); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on dh-autoreconf; however: Package dh-autoreconf is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-python-dev; however: Package libboost-python-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-regex-dev; however: Package libboost-regex-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-serialization-dev; however: Package libboost-serialization-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-test-dev; however: Package libboost-test-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libmpich-dev; however: Package libmpich-dev is not installed. pbuilder-satisfydepends-dummy depends on libxc-dev; however: Package libxc-dev is not installed. pbuilder-satisfydepends-dummy depends on python-dev; however: Package python-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-8{a} groff-base{a} hwloc-nox{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libboost-chrono1.67.0{a} libboost-python-dev{a} libboost-python1.67-dev{a} libboost-python1.67.0{a} libboost-regex-dev{a} libboost-regex1.67-dev{a} libboost-regex1.67.0{a} libboost-serialization-dev{a} libboost-serialization1.67-dev{a} libboost-serialization1.67.0{a} libboost-test-dev{a} libboost-test1.67-dev{a} libboost-test1.67.0{a} libboost-timer1.67.0{a} libboost1.67-dev{a} libbsd0{a} libcroco3{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran-8-dev{a} libgfortran5{a} libglib2.0-0{a} libhwloc5{a} libicu-dev{a} libicu63{a} liblapack-dev{a} liblapack3{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmpdec2{a} libmpich-dev{a} libmpich12{a} libncurses6{a} libnuma1{a} libpipeline1{a} libpython-dev{a} libpython-stdlib{a} libpython2-dev{a} libpython2-stdlib{a} libpython2.7{a} libpython2.7-dev{a} libpython2.7-minimal{a} libpython2.7-stdlib{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.7{a} libpython3.7-dev{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libreadline7{a} libsigsegv2{a} libssl1.1{a} libtool{a} libuchardet0{a} libxc-dev{a} libxc5{a} libxml2{a} m4{a} man-db{a} mime-support{a} mpich{a} po-debconf{a} python{a} python-dev{a} python-minimal{a} python2{a} python2-dev{a} python2-minimal{a} python2.7{a} python2.7-dev{a} python2.7-minimal{a} python3{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.7{a} python3.7-dev{a} python3.7-minimal{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libglib2.0-data libgpm2 libhwloc-plugins libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 106 newly installed, 0 to remove and 0 not upgraded. Need to get 157 MB of archives. After unpacking 551 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2+deb10u1 [104 kB] Get: 2 http://deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3+deb10u1 [935 kB] Get: 5 http://deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://deb.debian.org/debian buster/main i386 libpython2.7-minimal i386 2.7.16-2+deb10u1 [395 kB] Get: 8 http://deb.debian.org/debian buster/main i386 python2.7-minimal i386 2.7.16-2+deb10u1 [1381 kB] Get: 9 http://deb.debian.org/debian buster/main i386 python2-minimal i386 2.7.16-1 [41.4 kB] Get: 10 http://deb.debian.org/debian buster/main i386 python-minimal i386 2.7.16-1 [21.0 kB] Get: 11 http://deb.debian.org/debian buster/main i386 libssl1.1 i386 1.1.1d-0+deb10u6 [1538 kB] Get: 12 http://deb.debian.org/debian buster/main i386 mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main i386 libexpat1 i386 2.2.6-2+deb10u1 [104 kB] Get: 14 http://deb.debian.org/debian buster/main i386 readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main i386 libreadline7 i386 7.0-5 [156 kB] Get: 16 http://deb.debian.org/debian buster/main i386 libpython2.7-stdlib i386 2.7.16-2+deb10u1 [1934 kB] Get: 17 http://deb.debian.org/debian buster/main i386 python2.7 i386 2.7.16-2+deb10u1 [305 kB] Get: 18 http://deb.debian.org/debian buster/main i386 libpython2-stdlib i386 2.7.16-1 [20.8 kB] Get: 19 http://deb.debian.org/debian buster/main i386 libpython-stdlib i386 2.7.16-1 [20.8 kB] Get: 20 http://deb.debian.org/debian buster/main i386 python2 i386 2.7.16-1 [41.6 kB] Get: 21 http://deb.debian.org/debian buster/main i386 python i386 2.7.16-1 [22.8 kB] Get: 22 http://deb.debian.org/debian buster/main i386 libpython3.7-minimal i386 3.7.3-2+deb10u3 [590 kB] Get: 23 http://deb.debian.org/debian buster/main i386 python3.7-minimal i386 3.7.3-2+deb10u3 [1744 kB] Get: 24 http://deb.debian.org/debian buster/main i386 python3-minimal i386 3.7.3-1 [36.6 kB] Get: 25 http://deb.debian.org/debian buster/main i386 libmpdec2 i386 2.4.2-2 [83.2 kB] Get: 26 http://deb.debian.org/debian buster/main i386 libpython3.7-stdlib i386 3.7.3-2+deb10u3 [1750 kB] Get: 27 http://deb.debian.org/debian buster/main i386 python3.7 i386 3.7.3-2+deb10u3 [330 kB] Get: 28 http://deb.debian.org/debian buster/main i386 libpython3-stdlib i386 3.7.3-1 [20.0 kB] Get: 29 http://deb.debian.org/debian buster/main i386 python3 i386 3.7.3-1 [61.5 kB] Get: 30 http://deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 31 http://deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4+deb10u2 [242 kB] Get: 32 http://deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4+deb10u2 [124 kB] Get: 33 http://deb.debian.org/debian buster/main i386 file i386 1:5.35-4+deb10u2 [66.4 kB] Get: 34 http://deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 35 http://deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 36 http://deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 37 http://deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 38 http://deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 39 http://deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 40 http://deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 41 http://deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 42 http://deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 43 http://deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 44 http://deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 45 http://deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 46 http://deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 47 http://deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 48 http://deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2+deb10u3 [1334 kB] Get: 49 http://deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6+deb10u1 [8451 kB] Get: 50 http://deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+deb10u2 [723 kB] Get: 51 http://deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 52 http://deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2+deb10u2 [109 kB] Get: 53 http://deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 54 http://deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 55 http://deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 56 http://deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Get: 57 http://deb.debian.org/debian buster/main i386 python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 58 http://deb.debian.org/debian buster/main i386 python3-distutils all 3.7.3-1 [142 kB] Get: 59 http://deb.debian.org/debian buster/main i386 dh-python all 3.20190308 [99.3 kB] Get: 60 http://deb.debian.org/debian buster/main i386 libgfortran5 i386 8.3.0-6 [549 kB] Get: 61 http://deb.debian.org/debian buster/main i386 libgfortran-8-dev i386 8.3.0-6 [603 kB] Get: 62 http://deb.debian.org/debian buster/main i386 gfortran-8 i386 8.3.0-6 [9465 kB] Get: 63 http://deb.debian.org/debian buster/main i386 gfortran i386 4:8.3.0-1 [1432 B] Get: 64 http://deb.debian.org/debian buster/main i386 libltdl7 i386 2.4.6-9 [392 kB] Get: 65 http://deb.debian.org/debian buster/main i386 libnuma1 i386 2.0.12-1 [27.7 kB] Get: 66 http://deb.debian.org/debian buster/main i386 libhwloc5 i386 1.11.12-3 [119 kB] Get: 67 http://deb.debian.org/debian buster/main i386 hwloc-nox i386 1.11.12-3 [158 kB] Get: 68 http://deb.debian.org/debian buster/main i386 icu-devtools i386 63.1-6+deb10u1 [196 kB] Get: 69 http://deb.debian.org/debian buster/main i386 libblas3 i386 3.8.0-2 [142 kB] Get: 70 http://deb.debian.org/debian buster/main i386 libblas-dev i386 3.8.0-2 [150 kB] Get: 71 http://deb.debian.org/debian buster/main i386 libboost-chrono1.67.0 i386 1.67.0-13+deb10u1 [235 kB] Get: 72 http://deb.debian.org/debian buster/main i386 libboost1.67-dev i386 1.67.0-13+deb10u1 [8388 kB] Get: 73 http://deb.debian.org/debian buster/main i386 libboost-python1.67.0 i386 1.67.0-13+deb10u1 [337 kB] Get: 74 http://deb.debian.org/debian buster/main i386 libpython2.7 i386 2.7.16-2+deb10u1 [1059 kB] Get: 75 http://deb.debian.org/debian buster/main i386 libexpat1-dev i386 2.2.6-2+deb10u1 [156 kB] Get: 76 http://deb.debian.org/debian buster/main i386 libpython2.7-dev i386 2.7.16-2+deb10u1 [31.4 MB] Get: 77 http://deb.debian.org/debian buster/main i386 libpython2-dev i386 2.7.16-1 [20.9 kB] Get: 78 http://deb.debian.org/debian buster/main i386 libpython-dev i386 2.7.16-1 [20.9 kB] Get: 79 http://deb.debian.org/debian buster/main i386 python2.7-dev i386 2.7.16-2+deb10u1 [295 kB] Get: 80 http://deb.debian.org/debian buster/main i386 python2-dev i386 2.7.16-1 [1208 B] Get: 81 http://deb.debian.org/debian buster/main i386 python-dev i386 2.7.16-1 [1184 B] Get: 82 http://deb.debian.org/debian buster/main i386 libpython3.7 i386 3.7.3-2+deb10u3 [1506 kB] Get: 83 http://deb.debian.org/debian buster/main i386 libpython3.7-dev i386 3.7.3-2+deb10u3 [47.7 MB] Get: 84 http://deb.debian.org/debian buster/main i386 libpython3-dev i386 3.7.3-1 [20.2 kB] Get: 85 http://deb.debian.org/debian buster/main i386 python3.7-dev i386 3.7.3-2+deb10u3 [509 kB] Get: 86 http://deb.debian.org/debian buster/main i386 python3-dev i386 3.7.3-1 [1260 B] Get: 87 http://deb.debian.org/debian buster/main i386 libboost-python1.67-dev i386 1.67.0-13+deb10u1 [347 kB] Get: 88 http://deb.debian.org/debian buster/main i386 libboost-python-dev i386 1.67.0.1 [3944 B] Get: 89 http://deb.debian.org/debian buster/main i386 libboost-regex1.67.0 i386 1.67.0-13+deb10u1 [508 kB] Get: 90 http://deb.debian.org/debian buster/main i386 libicu-dev i386 63.1-6+deb10u1 [9377 kB] Get: 91 http://deb.debian.org/debian buster/main i386 libboost-regex1.67-dev i386 1.67.0-13+deb10u1 [561 kB] Get: 92 http://deb.debian.org/debian buster/main i386 libboost-regex-dev i386 1.67.0.1 [3916 B] Get: 93 http://deb.debian.org/debian buster/main i386 libboost-serialization1.67.0 i386 1.67.0-13+deb10u1 [325 kB] Get: 94 http://deb.debian.org/debian buster/main i386 libboost-serialization1.67-dev i386 1.67.0-13+deb10u1 [367 kB] Get: 95 http://deb.debian.org/debian buster/main i386 libboost-serialization-dev i386 1.67.0.1 [3876 B] Get: 96 http://deb.debian.org/debian buster/main i386 libboost-timer1.67.0 i386 1.67.0-13+deb10u1 [232 kB] Get: 97 http://deb.debian.org/debian buster/main i386 libboost-test1.67.0 i386 1.67.0-13+deb10u1 [471 kB] Get: 98 http://deb.debian.org/debian buster/main i386 libboost-test1.67-dev i386 1.67.0-13+deb10u1 [525 kB] Get: 99 http://deb.debian.org/debian buster/main i386 libboost-test-dev i386 1.67.0.1 [3684 B] Get: 100 http://deb.debian.org/debian buster/main i386 liblapack3 i386 3.8.0-2 [1974 kB] Get: 101 http://deb.debian.org/debian buster/main i386 liblapack-dev i386 3.8.0-2 [2035 kB] Get: 102 http://deb.debian.org/debian buster/main i386 libmpich12 i386 3.3-3 [1139 kB] Get: 103 http://deb.debian.org/debian buster/main i386 mpich i386 3.3-3 [404 kB] Get: 104 http://deb.debian.org/debian buster/main i386 libmpich-dev i386 3.3-3 [1473 kB] Get: 105 http://deb.debian.org/debian buster/main i386 libxc5 i386 4.2.3-3 [1350 kB] Get: 106 http://deb.debian.org/debian buster/main i386 libxc-dev i386 4.2.3-3 [2421 kB] Fetched 157 MB in 3s (52.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2+deb10u1_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2+deb10u1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../02-libuchardet0_0.0.6-3_i386.deb ... 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Unpacking libboost-test-dev:i386 (1.67.0.1) ... Selecting previously unselected package liblapack3:i386. Preparing to unpack .../71-liblapack3_3.8.0-2_i386.deb ... Unpacking liblapack3:i386 (3.8.0-2) ... Selecting previously unselected package liblapack-dev:i386. Preparing to unpack .../72-liblapack-dev_3.8.0-2_i386.deb ... Unpacking liblapack-dev:i386 (3.8.0-2) ... Selecting previously unselected package libmpich12:i386. Preparing to unpack .../73-libmpich12_3.3-3_i386.deb ... Unpacking libmpich12:i386 (3.3-3) ... Selecting previously unselected package mpich. Preparing to unpack .../74-mpich_3.3-3_i386.deb ... Unpacking mpich (3.3-3) ... Selecting previously unselected package libmpich-dev:i386. Preparing to unpack .../75-libmpich-dev_3.3-3_i386.deb ... Unpacking libmpich-dev:i386 (3.3-3) ... Selecting previously unselected package libxc5:i386. Preparing to unpack .../76-libxc5_4.2.3-3_i386.deb ... Unpacking libxc5:i386 (4.2.3-3) ... 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Setting up libltdl7:i386 (2.4.6-9) ... Setting up libgfortran5:i386 (8.3.0-6) ... Setting up libnuma1:i386 (2.0.12-1) ... Setting up libmpich12:i386 (3.3-3) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:i386 (0.0.6-3) ... Setting up libboost-timer1.67.0:i386 (1.67.0-13+deb10u1) ... Setting up libboost-python1.67.0 (1.67.0-13+deb10u1) ... Setting up libmpdec2:i386 (2.4.2-2) ... Setting up libboost-serialization1.67.0:i386 (1.67.0-13+deb10u1) ... Setting up libbsd0:i386 (0.9.1-2+deb10u1) ... Setting up libelf1:i386 (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libicu-dev:i386 (63.1-6+deb10u1) ... Setting up libxml2:i386 (2.9.4+dfsg1-7+deb10u2) ... Setting up libreadline7:i386 (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libboost-serialization1.67-dev:i386 (1.67.0-13+deb10u1) ... Setting up libgfortran-8-dev:i386 (8.3.0-6) ... Setting up libpython3.7-stdlib:i386 (3.7.3-2+deb10u3) ... Setting up libboost-regex1.67.0:i386 (1.67.0-13+deb10u1) ... Setting up libpython3.7:i386 (3.7.3-2+deb10u3) ... Setting up libtool (2.4.6-9) ... Setting up libboost-regex1.67-dev:i386 (1.67.0-13+deb10u1) ... Setting up libhwloc5:i386 (1.11.12-3) ... Setting up gfortran-8 (8.3.0-6) ... Setting up libpython3.7-dev:i386 (3.7.3-2+deb10u3) ... Setting up libxc5:i386 (4.2.3-3) ... Setting up libboost-test1.67.0:i386 (1.67.0-13+deb10u1) ... Setting up hwloc-nox (1.11.12-3) ... Setting up libxc-dev (4.2.3-3) ... Setting up m4 (1.4.18-2) ... Setting up gfortran (4:8.3.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libboost-test1.67-dev:i386 (1.67.0-13+deb10u1) ... Setting up libpython2.7-stdlib:i386 (2.7.16-2+deb10u1) ... Setting up libboost-test-dev:i386 (1.67.0.1) ... Setting up libblas3:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:i386 (0.6.12-3) ... Setting up libboost-serialization-dev:i386 (1.67.0.1) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3+deb10u1) ... Setting up libboost-regex-dev:i386 (1.67.0.1) ... Setting up libblas-dev:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up libpython3-stdlib:i386 (3.7.3-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.3-2+deb10u3) ... Setting up libpython2.7:i386 (2.7.16-2+deb10u1) ... Setting up liblapack3:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up libpython2.7-dev:i386 (2.7.16-2+deb10u1) ... Setting up gettext (0.19.8.1-9) ... Setting up libpython3-dev:i386 (3.7.3-1) ... Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libpython2-stdlib:i386 (2.7.16-1) ... Setting up mpich (3.3-3) ... update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode Setting up python3 (3.7.3-1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python2 (2.7.16-1) ... Setting up python3.7-dev (3.7.3-2+deb10u3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython-stdlib:i386 (2.7.16-1) ... Setting up liblapack-dev:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up libmpich-dev:i386 (3.3-3) ... update-alternatives: using /usr/include/i386-linux-gnu/mpich to provide /usr/include/i386-linux-gnu/mpi (mpi-i386-linux-gnu) in auto mode Setting up libpython2-dev:i386 (2.7.16-1) ... Setting up python3-lib2to3 (3.7.3-1) ... Setting up python (2.7.16-1) ... Setting up python2.7-dev (2.7.16-2+deb10u1) ... Setting up python3-distutils (3.7.3-1) ... Setting up dh-python (3.20190308) ... Setting up python2-dev (2.7.16-1) ... Setting up po-debconf (1.0.21) ... Setting up libpython-dev:i386 (2.7.16-1) ... Setting up python3-dev (3.7.3-1) ... Setting up python-dev (2.7.16-1) ... Setting up libboost-python1.67-dev (1.67.0-13+deb10u1) ... Setting up libboost-python-dev (1.67.0.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up debhelper (12.1.1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/bagel-1.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../bagel_1.2.2-1_source.changes dpkg-buildpackage: info: source package bagel dpkg-buildpackage: info: source version 1.2.2-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael Banck dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --max-parallel=1 --with autoreconf debian/rules override_dh_auto_clean make[1]: Entering directory '/build/bagel-1.2.2' dh_auto_clean rm -rf /build/bagel-1.2.2/src/testsuite make[1]: Leaving directory '/build/bagel-1.2.2' dh_autoreconf_clean -O--max-parallel=1 dh_clean -O--max-parallel=1 debian/rules build dh build --max-parallel=1 --with autoreconf dh_update_autotools_config -O--max-parallel=1 dh_autoreconf -O--max-parallel=1 libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:17: installing './compile' configure.ac:39: installing './config.guess' configure.ac:39: installing './config.sub' configure.ac:6: installing './install-sh' configure.ac:6: installing './missing' Makefile.am: installing './INSTALL' src/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/bagel-1.2.2' if [ -f /proc/meminfo ]; then cat /proc/meminfo; fi MemTotal: 8210604 kB MemFree: 1299072 kB MemAvailable: 6658496 kB Buffers: 229100 kB Cached: 5600516 kB SwapCached: 30684 kB Active: 1561948 kB Inactive: 4855328 kB Active(anon): 26452 kB Inactive(anon): 561516 kB Active(file): 1535496 kB Inactive(file): 4293812 kB Unevictable: 64 kB Mlocked: 64 kB HighTotal: 7487344 kB HighFree: 1231112 kB LowTotal: 723260 kB LowFree: 67960 kB SwapTotal: 36997112 kB SwapFree: 36946568 kB Dirty: 1376 kB Writeback: 0 kB AnonPages: 558748 kB Mapped: 115724 kB Shmem: 244 kB KReclaimable: 291108 kB Slab: 364288 kB SReclaimable: 291108 kB SUnreclaim: 73180 kB KernelStack: 2640 kB PageTables: 5492 kB NFS_Unstable: 0 kB Bounce: 0 kB WritebackTmp: 0 kB CommitLimit: 41102412 kB Committed_AS: 827184 kB VmallocTotal: 122880 kB VmallocUsed: 19232 kB VmallocChunk: 0 kB Percpu: 62976 kB HardwareCorrupted: 0 kB AnonHugePages: 227328 kB ShmemHugePages: 0 kB ShmemPmdMapped: 0 kB FileHugePages: 0 kB FilePmdMapped: 0 kB HugePages_Total: 0 HugePages_Free: 0 HugePages_Rsvd: 0 HugePages_Surp: 0 Hugepagesize: 2048 kB Hugetlb: 0 kB DirectMap4k: 22520 kB DirectMap2M: 878592 kB dh_auto_configure -- \ --datadir=/usr/share/bagel \ --libdir=/usr/lib/bagel \ --enable-static \ --disable-shared \ --with-boost \ --with-boost-libdir=/usr/lib/i386-linux-gnu \ --with-libxc=yes \ --with-mpi=openmpi \ --disable-scalapack \ --enable-smith ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --libexecdir=\${prefix}/lib/i386-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --datadir=/usr/share/bagel --libdir=/usr/lib/bagel --enable-static --disable-shared --with-boost --with-boost-libdir=/usr/lib/i386-linux-gnu --with-libxc=yes --with-mpi=openmpi --disable-scalapack --enable-smith configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for python... /usr/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/dist-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/dist-packages checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none ..openmpi requested.. checking for mpicc... mpicc checking for mpicxx... mpicxx checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) none checking whether we are using the GNU C++ compiler... (cached) yes checking whether mpicxx accepts -g... (cached) yes checking dependency style of mpicxx... (cached) none checking whether mpicxx supports C++11 features by default... yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mpicc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... yes checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... yes checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for boostlib >= 1.53... yes checking whether the Boost::Regex library is available... yes checking for exit in -lboost_regex... yes checking whether the Boost::Unit_Test_Framework library is available... yes configure: WARNING: BOOST_CPPFLAGS -I/usr/include checking whether the Boost::Serialization library is available... yes checking for exit in -lboost_serialization... yes checking xc.h usability... yes checking xc.h presence... yes checking for xc.h... yes checking for main in -lxc... yes checking for zgemm3m_... no checking mpi.h usability... yes checking mpi.h presence... yes checking for mpi.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/util/input/Makefile config.status: creating src/util/io/Makefile config.status: creating src/util/parallel/Makefile config.status: creating src/util/math/Makefile config.status: creating src/asd/multisite/Makefile config.status: creating src/asd/dimer/Makefile config.status: creating src/asd/dmrg/Makefile config.status: creating src/asd/orbital/Makefile config.status: creating src/asd/Makefile config.status: creating src/wfn/Makefile config.status: creating src/grad/Makefile config.status: creating src/integral/Makefile config.status: creating src/scf/Makefile config.status: creating src/df/Makefile config.status: creating src/prop/Makefile config.status: creating src/smith/Makefile config.status: creating src/molecule/Makefile config.status: creating src/pt2/Makefile config.status: creating src/ci/Makefile config.status: creating src/ci/ciutil/Makefile config.status: creating src/ci/fci/Makefile config.status: creating src/ci/zfci/Makefile config.status: creating src/ci/ras/Makefile config.status: creating src/response/Makefile config.status: creating src/multi/Makefile config.status: creating src/multi/casscf/Makefile config.status: creating src/multi/zcasscf/Makefile config.status: creating src/mat1e/Makefile config.status: creating src/opt/Makefile config.status: creating src/basis/Makefile config.status: creating bagel_config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/build/bagel-1.2.2' dh_auto_build -O--max-parallel=1 make -j1 make[1]: Entering directory '/build/bagel-1.2.2' make all-recursive make[2]: Entering directory '/build/bagel-1.2.2' Making all in src make[3]: Entering directory '/build/bagel-1.2.2/src' Making all in util make[4]: Entering directory '/build/bagel-1.2.2/src/util' Making all in parallel make[5]: Entering directory '/build/bagel-1.2.2/src/util/parallel' /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o process.lo process.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c process.cc -o process.o /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o mpi_interface.lo mpi_interface.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c mpi_interface.cc -o mpi_interface.o mpi_interface.cc: In member function 'void bagel::MPI_Interface::broadcast(size_t*, size_t, int) const': mpi_interface.cc:148:32: error: static assertion failed: size_t is assumed to be the same size as unsigned long long static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long"); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mpi_interface.cc: In member function 'void bagel::MPI_Interface::allgather(const size_t*, size_t, size_t*, size_t) const': mpi_interface.cc:201:32: error: static assertion failed: size_t is assumed to be the same size as unsigned long long static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long"); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mpi_interface.cc: In member function 'int bagel::MPI_Interface::request_send(const size_t*, size_t, int, int)': mpi_interface.cc:267:32: error: static assertion failed: size_t is assumed to be the same size as unsigned long long static_assert(sizeof(size_t) == sizeof(unsigned long long), "size_t is assumed to be the same size as unsigned long long"); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[5]: *** [Makefile:408: mpi_interface.lo] Error 1 make[5]: Leaving directory '/build/bagel-1.2.2/src/util/parallel' make[4]: *** [Makefile:462: all-recursive] Error 1 make[4]: Leaving directory '/build/bagel-1.2.2/src/util' make[3]: *** [Makefile:625: all-recursive] Error 1 make[3]: Leaving directory '/build/bagel-1.2.2/src' make[2]: *** [Makefile:422: all-recursive] Error 1 make[2]: Leaving directory '/build/bagel-1.2.2' make[1]: *** [Makefile:354: all] Error 2 make[1]: Leaving directory '/build/bagel-1.2.2' dh_auto_build: make -j1 returned exit code 2 make: *** [debian/rules:12: build] Error 2 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/32441 and its subdirectories Wed Sep 1 10:35:56 UTC 2021 W: No second build log, what happened?