Sat Jun 29 01:02:33 UTC 2019 I: starting to build biosquid/buster/i386 on jenkins on '2019-06-29 01:02' Sat Jun 29 01:02:33 UTC 2019 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_13/634/console.log Sat Jun 29 01:02:33 UTC 2019 I: Downloading source for buster/biosquid=1.9g+cvs20050121-11 --2019-06-29 01:02:33-- http://deb.debian.org/debian/pool/main/b/biosquid/biosquid_1.9g+cvs20050121-11.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 302 Found Location: http://cdn-fastly.deb.debian.org/debian/pool/main/b/biosquid/biosquid_1.9g+cvs20050121-11.dsc [following] --2019-06-29 01:02:33-- http://cdn-fastly.deb.debian.org/debian/pool/main/b/biosquid/biosquid_1.9g+cvs20050121-11.dsc Reusing existing connection to 78.137.99.97:3128. Proxy request sent, awaiting response... 200 OK Length: 2199 (2.1K) Saving to: ‘biosquid_1.9g+cvs20050121-11.dsc’ 0K .. 100% 148M=0s 2019-06-29 01:02:34 (148 MB/s) - ‘biosquid_1.9g+cvs20050121-11.dsc’ saved [2199/2199] Sat Jun 29 01:02:34 UTC 2019 I: biosquid_1.9g+cvs20050121-11.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: biosquid Binary: biosquid, libsquid1, libsquid-dev Architecture: any Version: 1.9g+cvs20050121-11 Maintainer: Debian-Med Packaging Team Uploaders: Andreas Tille Homepage: http://eddylab.org/software.html Standards-Version: 4.2.0 Vcs-Browser: https://salsa.debian.org/med-team/biosquid Vcs-Git: https://salsa.debian.org/med-team/biosquid.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper (>= 11~), d-shlibs, pvm-dev Package-List: biosquid deb science optional arch=any libsquid-dev deb libdevel optional arch=any libsquid1 deb libs optional arch=any Checksums-Sha1: 5ff847263f38a26e8cf4e2fba0414c5fdb8c6732 304060 biosquid_1.9g+cvs20050121.orig.tar.gz 1976d622be69f026def16a1a93bec3caa1e9e1a4 14044 biosquid_1.9g+cvs20050121-11.debian.tar.xz Checksums-Sha256: b6b752bcea5ec6468b52096cdde0e792b7f5ed5fb3f477ec7ac233c54646f925 304060 biosquid_1.9g+cvs20050121.orig.tar.gz afd5bc401fff976c2432b1eced7afbc4b97236e00f32691c397c0ebe6f6acb6c 14044 biosquid_1.9g+cvs20050121-11.debian.tar.xz Files: 75ca6e693bedb18086b9e5911f3c047a 304060 biosquid_1.9g+cvs20050121.orig.tar.gz 4e01bdb2b6f8623ee5e765b273404d04 14044 biosquid_1.9g+cvs20050121-11.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlt3uKgRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEz6xAAhWiQRJZ1X1Wvw4xyX87iyX0DL/cbWTED mIth3MukuPTkUbLrsGnEdPxqF/ZcAYw9Nf9fb4kOfgGxoZ2oCxeJ5/a2Ap1fvzcD q7HEbIRHIpNAV2cl4y3+DLNXR3zP1Gafl+0SakG0S6xTw6/VP3YNNzMfopmj8HOG WSD7BZWurHLPMGJat/1XGJer8wwyR5LwHqzkrN7lbv+vlZPeIXV6TRiA28YSkjDK p9Um3CDKEZ127POQCnGp+UeFwP2UQv6P+r7dxy8TT12R5fFMqaoLNtzCAJKCWdGd XduoJEg9kxPou58KxPK93cUdNrSDVYb5Frjy11Q3YKNmtJwQHr9Yx18WZQt1hEIv XD6VBKr3l9uX+dgnMviAwp4WbGmaii2GWtBZY+IWg0EV8D4YlzgOTjJCntEwLwVv hexYkp7tpDf0DZJl2eGie4xwxyOrhnyE/CjE0ZHN5j2SJiTkyDx+y+eSApQRYpNT n9OQZR1dI0xTKhotgAQsvrVAqZOGrQ/e2Gj/HEvTJOEGjXxCC5TXMQoFa6s+3aP2 iZYYFOOzE2zglKBbr28ynQwJg4pK0OLf30uNfA+9FSadvGlccVlqvQFhZZ5nXJiy 2uNZzHTR9zXpVeDa2b95CjIHXEMCfMDcnXXbcDhyCxOUKIjSdXYXcWMxiI4cXFjI sLmcAIoQLX8= =rc3A -----END PGP SIGNATURE----- Sat Jun 29 01:02:34 UTC 2019 I: Checking whether the package is not for us Sat Jun 29 01:02:34 UTC 2019 I: Starting 1st build on remote node profitbricks-build12-i386.debian.net. Sat Jun 29 01:02:34 UTC 2019 I: Preparing to do remote build '1' on profitbricks-build12-i386.debian.net. Sat Jun 29 01:16:00 UTC 2019 I: Deleting $TMPDIR on profitbricks-build12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jun 28 13:02:36 -12 2019 I: pbuilder-time-stamp: 1561770156 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [biosquid_1.9g+cvs20050121-11.dsc] I: copying [./biosquid_1.9g+cvs20050121.orig.tar.gz] I: copying [./biosquid_1.9g+cvs20050121-11.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Aug 17 18:11:52 2018 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./biosquid_1.9g+cvs20050121-11.dsc dpkg-source: info: extracting biosquid in biosquid-1.9g+cvs20050121 dpkg-source: info: unpacking biosquid_1.9g+cvs20050121.orig.tar.gz dpkg-source: info: unpacking biosquid_1.9g+cvs20050121-11.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying afetch.man.patch dpkg-source: info: applying alistat.man.patch dpkg-source: info: applying compstruct.man.patch dpkg-source: info: applying Makefile.in.patch dpkg-source: info: applying seqstat.man.patch dpkg-source: info: applying sfetch.man.patch dpkg-source: info: applying shuffle.man.patch dpkg-source: info: applying sindex.man.patch dpkg-source: info: applying sreformat.man.patch dpkg-source: info: applying getopt-segmentation-fault.patch dpkg-source: info: applying reproducible.patch dpkg-source: info: applying perl-testsuite-inc.patch dpkg-source: info: applying automake.patch dpkg-source: info: applying pkg-config.patch I: using fakeroot in build. I: Installing the build-deps -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), d-shlibs, pvm-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19231 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs; however: Package d-shlibs is not installed. pbuilder-satisfydepends-dummy depends on pvm-dev; however: Package pvm-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libcroco3{a} libedit2{a} libelf1{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libgssapi-krb5-2{a} libicu63{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1{a} libncurses-dev{a} libncurses6{a} libpipeline1{a} libpvm3{a} libreadline-dev{a} libreadline7{a} libsigsegv2{a} libssl1.1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} openssh-client{a} po-debconf{a} pvm{a} pvm-dev{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 49 newly installed, 0 to remove and 0 not upgraded. Need to get 23.9 MB of archives. After unpacking 86.1 MB will be used. Writing extended state information... Get: 1 http://cdn-fastly.deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2 [104 kB] Get: 2 http://cdn-fastly.deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://cdn-fastly.deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://cdn-fastly.deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3 [935 kB] Get: 5 http://cdn-fastly.deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://cdn-fastly.deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://cdn-fastly.deb.debian.org/debian buster/main i386 readline-common all 7.0-5 [70.6 kB] Get: 8 http://cdn-fastly.deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 9 http://cdn-fastly.deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4 [242 kB] Get: 10 http://cdn-fastly.deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4 [124 kB] Get: 11 http://cdn-fastly.deb.debian.org/debian buster/main i386 file i386 1:5.35-4 [66.3 kB] Get: 12 http://cdn-fastly.deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 13 http://cdn-fastly.deb.debian.org/debian buster/main i386 libedit2 i386 3.1-20181209-1 [98.2 kB] Get: 14 http://cdn-fastly.deb.debian.org/debian buster/main i386 libkeyutils1 i386 1.6-6 [15.4 kB] Get: 15 http://cdn-fastly.deb.debian.org/debian buster/main i386 libkrb5support0 i386 1.17-3 [68.6 kB] Get: 16 http://cdn-fastly.deb.debian.org/debian buster/main i386 libk5crypto3 i386 1.17-3 [126 kB] Get: 17 http://cdn-fastly.deb.debian.org/debian buster/main i386 libssl1.1 i386 1.1.1c-1 [1532 kB] Get: 18 http://cdn-fastly.deb.debian.org/debian buster/main i386 libkrb5-3 i386 1.17-3 [396 kB] Get: 19 http://cdn-fastly.deb.debian.org/debian buster/main i386 libgssapi-krb5-2 i386 1.17-3 [168 kB] Get: 20 http://cdn-fastly.deb.debian.org/debian buster/main i386 openssh-client i386 1:7.9p1-10 [833 kB] Get: 21 http://cdn-fastly.deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 22 http://cdn-fastly.deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 23 http://cdn-fastly.deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 24 http://cdn-fastly.deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 25 http://cdn-fastly.deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 26 http://cdn-fastly.deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 27 http://cdn-fastly.deb.debian.org/debian buster/main i386 d-shlibs all 0.84 [17.2 kB] Get: 28 http://cdn-fastly.deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 29 http://cdn-fastly.deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 30 http://cdn-fastly.deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 31 http://cdn-fastly.deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 32 http://cdn-fastly.deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 33 http://cdn-fastly.deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 34 http://cdn-fastly.deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 35 http://cdn-fastly.deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2 [1333 kB] Get: 36 http://cdn-fastly.deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6 [8443 kB] Get: 37 http://cdn-fastly.deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+b3 [721 kB] Get: 38 http://cdn-fastly.deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 39 http://cdn-fastly.deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2 [109 kB] Get: 40 http://cdn-fastly.deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 41 http://cdn-fastly.deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 42 http://cdn-fastly.deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 43 http://cdn-fastly.deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Get: 44 http://cdn-fastly.deb.debian.org/debian buster/main i386 libncurses-dev i386 6.1+20181013-2 [360 kB] Get: 45 http://cdn-fastly.deb.debian.org/debian buster/main i386 libpvm3 i386 3.4.6-2 [92.8 kB] Get: 46 http://cdn-fastly.deb.debian.org/debian buster/main i386 libreadline7 i386 7.0-5 [156 kB] Get: 47 http://cdn-fastly.deb.debian.org/debian buster/main i386 libreadline-dev i386 7.0-5 [146 kB] Get: 48 http://cdn-fastly.deb.debian.org/debian buster/main i386 pvm i386 3.4.6-2 [176 kB] Get: 49 http://cdn-fastly.deb.debian.org/debian buster/main i386 pvm-dev i386 3.4.6-2 [293 kB] Fetched 23.9 MB in 20s (1198 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19231 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../02-libuchardet0_0.0.6-3_i386.deb ... Unpacking libuchardet0:i386 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_i386.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../04-libpipeline1_1.5.1-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_i386.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../06-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../07-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../08-libmagic-mgc_1%3a5.35-4_i386.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../09-libmagic1_1%3a5.35-4_i386.deb ... Unpacking libmagic1:i386 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../10-file_1%3a5.35-4_i386.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../11-gettext-base_0.19.8.1-9_i386.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libedit2:i386. Preparing to unpack .../12-libedit2_3.1-20181209-1_i386.deb ... Unpacking libedit2:i386 (3.1-20181209-1) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../13-libkeyutils1_1.6-6_i386.deb ... Unpacking libkeyutils1:i386 (1.6-6) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../14-libkrb5support0_1.17-3_i386.deb ... Unpacking libkrb5support0:i386 (1.17-3) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../15-libk5crypto3_1.17-3_i386.deb ... Unpacking libk5crypto3:i386 (1.17-3) ... Selecting previously unselected package libssl1.1:i386. Preparing to unpack .../16-libssl1.1_1.1.1c-1_i386.deb ... Unpacking libssl1.1:i386 (1.1.1c-1) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../17-libkrb5-3_1.17-3_i386.deb ... Unpacking libkrb5-3:i386 (1.17-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../18-libgssapi-krb5-2_1.17-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.17-3) ... Selecting previously unselected package openssh-client. Preparing to unpack .../19-openssh-client_1%3a7.9p1-10_i386.deb ... Unpacking openssh-client (1:7.9p1-10) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../20-libsigsegv2_2.12-2_i386.deb ... Unpacking libsigsegv2:i386 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../21-m4_1.4.18-2_i386.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../22-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../23-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../24-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../25-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../26-d-shlibs_0.84_all.deb ... Unpacking d-shlibs (0.84) ... Selecting previously unselected package libtool. Preparing to unpack .../27-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../28-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../29-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../30-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../31-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../32-libelf1_0.176-1.1_i386.deb ... Unpacking libelf1:i386 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../33-dwz_0.12-3_i386.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:i386. 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Setting up libsigsegv2:i386 (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up d-shlibs (0.84) ... Setting up libk5crypto3:i386 (1.17-3) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:i386 (0.0.6-3) ... Setting up libkrb5-3:i386 (1.17-3) ... Setting up libbsd0:i386 (0.9.1-2) ... Setting up libelf1:i386 (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:i386 (2.9.4+dfsg1-7+b3) ... Setting up libreadline7:i386 (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libncurses-dev:i386 (6.1+20181013-2) ... Setting up libtool (2.4.6-9) ... Setting up libedit2:i386 (3.1-20181209-1) ... Setting up m4 (1.4.18-2) ... Setting up libreadline-dev:i386 (7.0-5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:i386 (1.17-3) ... Setting up libcroco3:i386 (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up openssh-client (1:7.9p1-10) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up pvm (3.4.6-2) ... update-alternatives: using /usr/bin/rsh to provide /usr/lib/pvm3/bin/rsh (pvm-rsh) in auto mode Setting up po-debconf (1.0.21) ... Setting up pvm-dev (3.4.6-2) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/biosquid-1.9g+cvs20050121/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package biosquid dpkg-buildpackage: info: source version 1.9g+cvs20050121-11 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/biosquid-1.9g+cvs20050121' dh_auto_clean rm -f configure make[1]: Leaving directory '/build/biosquid-1.9g+cvs20050121' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/biosquid.substvars debian/libsquid1.substvars debian/libsquid-dev.substvars debian/files rm -fr -- debian/biosquid/ debian/tmp/ debian/libsquid1/ debian/libsquid-dev/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build dh_update_autotools_config install -d debian/.debhelper/bucket/files cp -an --reflink=auto config.sub debian/.debhelper/bucket/files/6256efe9320ee8690c8be56bb851415d90efe4d27a67fe374efd28a6c6733153.tmp mv debian/.debhelper/bucket/files/6256efe9320ee8690c8be56bb851415d90efe4d27a67fe374efd28a6c6733153.tmp debian/.debhelper/bucket/files/6256efe9320ee8690c8be56bb851415d90efe4d27a67fe374efd28a6c6733153 cp -f /usr/share/misc/config.sub ./config.sub dh_autoreconf find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i configure.ac:145: warning: underquoted definition of SQ_ARITHMETIC_FPOS_T configure.ac:145: run info Automake 'Extending aclocal' configure.ac:145: or see https://www.gnu.org/software/automake/manual/automake.html#Extending-aclocal libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. libtoolize: 'AC_PROG_RANLIB' is rendered obsolete by 'LT_INIT' configure.ac:145: warning: underquoted definition of SQ_ARITHMETIC_FPOS_T configure.ac:145: run info Automake 'Extending aclocal' configure.ac:145: or see https://www.gnu.org/software/automake/manual/automake.html#Extending-aclocal configure.ac:75: installing './compile' configure.ac:77: installing './config.guess' configure.ac:40: installing './missing' Makefile.am: installing './depcomp' find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory '/build/biosquid-1.9g+cvs20050121' # autoreconf && true autoconf dh_auto_configure -- --enable-lfs --enable-pvm ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --libexecdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-lfs --enable-pvm configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '1111' is supported by ustar format... yes checking whether GID '1111' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar configure: configuring the SQUID library for your system. checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for ranlib... ranlib checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for ar... /usr/bin/ar checking whether byte ordering is bigendian... no checking for ntohs... yes checking for ntohl... yes checking for htons... yes checking for htonl... yes checking size of unsigned short... 2 checking size of unsigned int... 4 checking size of unsigned long... 4 checking size of unsigned long long... 8 checking for strtoul... yes checking for strtoull... yes checking whether fpos_t is an arithmetic datatype... no. checking for strtoull... (cached) yes checking for ftello... yes checking for fseeko... yes checking for ftello64... yes checking for fseeko64... yes checking for ftell64... no checking for fseek64... no checking for stat64... yes checking for struct stat64... no! checking size of off_t... 4 checking size of off64_t... 0 checking size of fpos_t... 12 configure: configured for optional LFS, large file support configure: enabled optional PVM (Parallel Virtual Machine) support checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating Testsuite/Makefile config.status: creating squid.h config.status: creating libsquid.pc config.status: creating squidconf.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode # avoid duplicated definition of PACKAGE_NAME (basically conflicting with hmmer2 when used together) sed -i -e '/^#define PACKAGE_NAME /i #ifndef PACKAGE_NAME' \ -e '/^#define PACKAGE_NAME /a #endif' \ -e '/^#define PACKAGE_VERSION /i #ifndef PACKAGE_VERSION' \ -e '/^#define PACKAGE_VERSION /a #endif' \ -e '/^#define _LARGEFILE_SOURCE /i #ifndef _LARGEFILE_SOURCE' \ -e '/^#define _LARGEFILE_SOURCE /a #endif' \ -e '/^#define _LARGEFILE64_SOURCE /i #ifndef _LARGEFILE64_SOURCE' \ -e '/^#define _LARGEFILE64_SOURCE /a #endif' \ -e '/^#define VERSION /i #ifndef VERSION' \ -e '/^#define VERSION /a #endif' \ squidconf.h make[1]: Leaving directory '/build/biosquid-1.9g+cvs20050121' dh_auto_build make -j10 make[1]: Entering directory '/build/biosquid-1.9g+cvs20050121' make all-am make[2]: Entering directory '/build/biosquid-1.9g+cvs20050121' gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o afetch_main.o afetch_main.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-a2m.lo `test -f 'a2m.c' || echo './'`a2m.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-alignio.lo `test -f 'alignio.c' || echo './'`alignio.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-clustal.lo `test -f 'clustal.c' || echo './'`clustal.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-file.lo `test -f 'file.c' || echo './'`file.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-getopt.lo `test -f 'getopt.c' || echo './'`getopt.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-gki.lo `test -f 'gki.c' || echo './'`gki.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-hsregex.lo `test -f 'hsregex.c' || echo './'`hsregex.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-msa.lo `test -f 'msa.c' || echo './'`msa.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-msf.lo `test -f 'msf.c' || echo './'`msf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c clustal.c -fPIC -DPIC -o .libs/libsquid_la-clustal.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c a2m.c -fPIC -DPIC -o .libs/libsquid_la-a2m.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c getopt.c -fPIC -DPIC -o .libs/libsquid_la-getopt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c alignio.c -fPIC -DPIC -o .libs/libsquid_la-alignio.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c hsregex.c -fPIC -DPIC -o .libs/libsquid_la-hsregex.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c gki.c -fPIC -DPIC -o .libs/libsquid_la-gki.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c msf.c -fPIC -DPIC -o .libs/libsquid_la-msf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c file.c -fPIC -DPIC -o .libs/libsquid_la-file.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c msa.c -fPIC -DPIC -o .libs/libsquid_la-msa.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-phylip.lo `test -f 'phylip.c' || echo './'`phylip.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c clustal.c -o libsquid_la-clustal.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c a2m.c -o libsquid_la-a2m.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c getopt.c -o libsquid_la-getopt.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c phylip.c -fPIC -DPIC -o 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'revcomp.c' || echo './'`revcomp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c eps.c -o libsquid_la-eps.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c dirichlet.c -o libsquid_la-dirichlet.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c sqio.c -o libsquid_la-sqio.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o 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-DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-stopwatch.lo `test -f 'stopwatch.c' || echo './'`stopwatch.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c sre_stack.c -fPIC -DPIC -o .libs/libsquid_la-sre_stack.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-translate.lo `test -f 'translate.c' || echo './'`translate.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c 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-fstack-protector-strong -Wformat -Werror=format-security -c weight.c -fPIC -DPIC -o .libs/libsquid_la-weight.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libsquid_la-wuss.lo `test -f 'wuss.c' || echo './'`wuss.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c sre_stack.c -o libsquid_la-sre_stack.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c translate.c -o libsquid_la-translate.o >/dev/null 2>&1 gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 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-fstack-protector-strong -Wformat -Werror=format-security -c shuffle.c -o libsquid_la-shuffle.o >/dev/null 2>&1 gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cluster.o cluster.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sre_math.o sre_math.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c wuss.c -o libsquid_la-wuss.o >/dev/null 2>&1 gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sre_stack.o sre_stack.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o compalign_main.o compalign_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o compstruct_main.o compstruct_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o wuss.o wuss.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o revcomp_main.o revcomp_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o revcomp.o revcomp.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o shuffle.o shuffle.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o seqsplit_main.o seqsplit_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o seqstat_main.o seqstat_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sfetch_main.o sfetch_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o shuffle_main.o shuffle_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o iupac.o iupac.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c weight.c -o libsquid_la-weight.o >/dev/null 2>&1 gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sindex_main.o sindex_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sreformat_main.o sreformat_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o eps.o eps.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o translate_main.o translate_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o translate.o translate.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o weight_main.o weight_main.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -c -o weight.o weight.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:0 -Wl,-z,relro -Wl,-z,now -o libsquid.la -rpath /usr/lib/i386-linux-gnu libsquid_la-a2m.lo libsquid_la-alignio.lo libsquid_la-clustal.lo libsquid_la-file.lo libsquid_la-getopt.lo libsquid_la-gki.lo libsquid_la-hsregex.lo libsquid_la-msa.lo libsquid_la-msf.lo libsquid_la-phylip.lo libsquid_la-selex.lo libsquid_la-sqerror.lo libsquid_la-sqio.lo libsquid_la-squidcore.lo libsquid_la-sre_ctype.lo libsquid_la-sre_random.lo libsquid_la-sre_string.lo libsquid_la-ssi.lo libsquid_la-stockholm.lo libsquid_la-types.lo libsquid_la-vectorops.lo libsquid_la-aligneval.lo libsquid_la-cluster.lo libsquid_la-dayhoff.lo libsquid_la-dirichlet.lo libsquid_la-eps.lo libsquid_la-iupac.lo libsquid_la-revcomp.lo libsquid_la-rk.lo libsquid_la-seqencode.lo libsquid_la-shuffle.lo libsquid_la-sre_math.lo libsquid_la-sre_stack.lo libsquid_la-stopwatch.lo libsquid_la-translate.lo libsquid_la-weight.lo libsquid_la-wuss.lo -lpvm3 libtool: link: gcc -shared -fPIC -DPIC .libs/libsquid_la-a2m.o .libs/libsquid_la-alignio.o .libs/libsquid_la-clustal.o .libs/libsquid_la-file.o .libs/libsquid_la-getopt.o .libs/libsquid_la-gki.o .libs/libsquid_la-hsregex.o .libs/libsquid_la-msa.o .libs/libsquid_la-msf.o .libs/libsquid_la-phylip.o .libs/libsquid_la-selex.o .libs/libsquid_la-sqerror.o .libs/libsquid_la-sqio.o .libs/libsquid_la-squidcore.o .libs/libsquid_la-sre_ctype.o .libs/libsquid_la-sre_random.o .libs/libsquid_la-sre_string.o .libs/libsquid_la-ssi.o .libs/libsquid_la-stockholm.o .libs/libsquid_la-types.o .libs/libsquid_la-vectorops.o .libs/libsquid_la-aligneval.o .libs/libsquid_la-cluster.o .libs/libsquid_la-dayhoff.o .libs/libsquid_la-dirichlet.o .libs/libsquid_la-eps.o .libs/libsquid_la-iupac.o .libs/libsquid_la-revcomp.o .libs/libsquid_la-rk.o .libs/libsquid_la-seqencode.o .libs/libsquid_la-shuffle.o .libs/libsquid_la-sre_math.o .libs/libsquid_la-sre_stack.o .libs/libsquid_la-stopwatch.o .libs/libsquid_la-translate.o .libs/libsquid_la-weight.o .libs/libsquid_la-wuss.o -lpvm3 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libsquid.so.1 -o .libs/libsquid.so.1.0.0 libtool: link: (cd ".libs" && rm -f "libsquid.so.1" && ln -s "libsquid.so.1.0.0" "libsquid.so.1") libtool: link: (cd ".libs" && rm -f "libsquid.so" && ln -s "libsquid.so.1.0.0" "libsquid.so") libtool: link: /usr/bin/ar cru .libs/libsquid.a libsquid_la-a2m.o libsquid_la-alignio.o libsquid_la-clustal.o libsquid_la-file.o libsquid_la-getopt.o libsquid_la-gki.o libsquid_la-hsregex.o libsquid_la-msa.o libsquid_la-msf.o libsquid_la-phylip.o libsquid_la-selex.o libsquid_la-sqerror.o libsquid_la-sqio.o libsquid_la-squidcore.o libsquid_la-sre_ctype.o libsquid_la-sre_random.o libsquid_la-sre_string.o libsquid_la-ssi.o libsquid_la-stockholm.o libsquid_la-types.o libsquid_la-vectorops.o libsquid_la-aligneval.o libsquid_la-cluster.o libsquid_la-dayhoff.o libsquid_la-dirichlet.o libsquid_la-eps.o libsquid_la-iupac.o libsquid_la-revcomp.o libsquid_la-rk.o libsquid_la-seqencode.o libsquid_la-shuffle.o libsquid_la-sre_math.o libsquid_la-sre_stack.o libsquid_la-stopwatch.o libsquid_la-translate.o libsquid_la-weight.o libsquid_la-wuss.o /usr/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libsquid.a libtool: link: ( cd ".libs" && rm -f "libsquid.la" && ln -s "../libsquid.la" "libsquid.la" ) /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o compalign compalign_main.o aligneval.o libsquid.la -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o afetch afetch_main.o libsquid.la -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o alistat alistat_main.o aligneval.o cluster.o sre_math.o sre_stack.o libsquid.la -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o revcomp revcomp_main.o revcomp.o shuffle.o libsquid.la -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o compstruct compstruct_main.o sre_math.o sre_stack.o wuss.o libsquid.la -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o seqsplit seqsplit_main.o libsquid.la -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o seqstat seqstat_main.o libsquid.la -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o sfetch sfetch_main.o revcomp.o shuffle.o libsquid.la -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o shuffle shuffle_main.o iupac.o shuffle.o libsquid.la -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o sindex sindex_main.o libsquid.la -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sfetch sfetch_main.o revcomp.o shuffle.o ./.libs/libsquid.so -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/revcomp revcomp_main.o revcomp.o shuffle.o ./.libs/libsquid.so -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/afetch afetch_main.o ./.libs/libsquid.so -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/shuffle shuffle_main.o iupac.o shuffle.o ./.libs/libsquid.so -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/compalign compalign_main.o aligneval.o ./.libs/libsquid.so -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o sreformat sreformat_main.o eps.o shuffle.o sre_stack.o wuss.o libsquid.la -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o translate translate_main.o iupac.o revcomp.o shuffle.o sre_stack.o translate.o libsquid.la -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/alistat alistat_main.o aligneval.o cluster.o sre_math.o sre_stack.o ./.libs/libsquid.so -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sindex sindex_main.o ./.libs/libsquid.so -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/seqsplit seqsplit_main.o ./.libs/libsquid.so -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/seqstat seqstat_main.o ./.libs/libsquid.so -lm /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o weight weight_main.o aligneval.o cluster.o iupac.o sre_math.o sre_stack.o weight.o libsquid.la -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/compstruct compstruct_main.o sre_math.o sre_stack.o wuss.o ./.libs/libsquid.so -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sreformat sreformat_main.o eps.o shuffle.o sre_stack.o wuss.o ./.libs/libsquid.so -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/translate translate_main.o iupac.o revcomp.o shuffle.o sre_stack.o translate.o ./.libs/libsquid.so -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/weight weight_main.o aligneval.o cluster.o iupac.o sre_math.o sre_stack.o weight.o ./.libs/libsquid.so -lm make[2]: Leaving directory '/build/biosquid-1.9g+cvs20050121' make[1]: Leaving directory '/build/biosquid-1.9g+cvs20050121' rm -f debian/biosquid.debhelper.log debian/libsquid-dev.debhelper.log debian/libsquid1.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/biosquid-1.9g+cvs20050121' chmod u+x Testsuite/x-base-* Testsuite/bug-1-sfetch* ln -s .libs/libsquid.a dh_auto_test make -j10 check VERBOSE=1 make[2]: Entering directory '/build/biosquid-1.9g+cvs20050121' (cd Testsuite; make CC="gcc" CFLAGS="-g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security") make[3]: Entering directory '/build/biosquid-1.9g+cvs20050121/Testsuite' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_CONFIG_H -L../ -I../ -c sqdconfig_main.c gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -L../ -I../ -DHAVE_CONFIG_H -o sqdconfig sqdconfig_main.o -lsquid -lpvm3 -lm gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_CONFIG_H -L../ -I../ -c iospeed_main.c gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -L../ -I../ -DHAVE_CONFIG_H -o iospeed iospeed_main.o -lsquid -lpvm3 -lm /usr/bin/ld: iospeed_main.o: in function `main': ./Testsuite/iospeed_main.c:28: warning: the use of `tmpnam' is dangerous, better use `mkstemp' gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_CONFIG_H -L../ -I../ -c rndspeed_main.c gcc -g -O2 -ffile-prefix-map=/build/biosquid-1.9g+cvs20050121=. -fstack-protector-strong -Wformat -Werror=format-security -L../ -I../ -DHAVE_CONFIG_H -o rndspeed rndspeed_main.o -lsquid -lpvm3 -lm make[3]: Leaving directory '/build/biosquid-1.9g+cvs20050121/Testsuite' (cd Testsuite; make check) make[3]: Entering directory '/build/biosquid-1.9g+cvs20050121/Testsuite' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. fgets(): 0.16u 0.15s 00:00:00.30 Elapsed: 00:00:00 sre_fgets(): 0.23u 0.04s 00:00:00.27 Elapsed: 00:00:00 ReadSeq(): 0.54u 0.03s 00:00:00.57 Elapsed: 00:00:01 iospeed: ok rand(): 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00 sre_random(): 0.05u 0.00s 00:00:00.05 Elapsed: 00:00:00 rndspeed: ok x-base-afetch basic tests of afetch ... ok. x-base-alistat basic tests of alistat ... ok. x-base-seqstat basic tests of seqstat ... ok. x-base-sfetch basic tests of sfetch ... ok. x-base-shuffle basic tests of shuffle ... ok. x-base-sindex basic tests of sindex ... ok. x-base-sreformat basic tests of sreformat ... ok. bug-1-sfetch-path sfetch/SSI path bug ... ok. make[3]: Leaving directory '/build/biosquid-1.9g+cvs20050121/Testsuite' make[2]: Leaving directory '/build/biosquid-1.9g+cvs20050121' make[1]: Leaving directory '/build/biosquid-1.9g+cvs20050121' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep rm -f -- debian/biosquid.substvars debian/libsquid1.substvars debian/libsquid-dev.substvars rm -fr -- debian/.debhelper/generated/biosquid/ debian/biosquid/ debian/tmp/ debian/.debhelper/generated/libsquid1/ debian/libsquid1/ debian/.debhelper/generated/libsquid-dev/ debian/libsquid-dev/ dh_auto_install install -d /build/biosquid-1.9g\+cvs20050121/debian/tmp make -j1 install DESTDIR=/build/biosquid-1.9g\+cvs20050121/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/biosquid-1.9g+cvs20050121' make[2]: Entering directory '/build/biosquid-1.9g+cvs20050121' /bin/mkdir -p '/build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu' /bin/bash ./libtool --mode=install /usr/bin/install -c libsquid.la '/build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/libsquid.so.1.0.0 /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 libtool: install: (cd /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libsquid.so.1.0.0 libsquid.so.1 || { rm -f libsquid.so.1 && ln -s libsquid.so.1.0.0 libsquid.so.1; }; }) libtool: install: (cd /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f libsquid.so.1.0.0 libsquid.so || { rm -f libsquid.so && ln -s libsquid.so.1.0.0 libsquid.so; }; }) libtool: install: /usr/bin/install -c .libs/libsquid.lai /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu/libsquid.la libtool: install: /usr/bin/install -c .libs/libsquid.a /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu/libsquid.a libtool: install: chmod 644 /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu/libsquid.a libtool: install: ranlib /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu/libsquid.a libtool: warning: remember to run 'libtool --finish /usr/lib/i386-linux-gnu' /bin/mkdir -p '/build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin' /bin/bash ./libtool --mode=install /usr/bin/install -c afetch alistat compalign compstruct revcomp seqsplit seqstat sfetch shuffle sindex sreformat translate weight '/build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin' libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/afetch /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/afetch libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/alistat /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/alistat libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/compalign /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/compalign libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/compstruct /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/compstruct libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/revcomp /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/revcomp libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/seqsplit /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/seqsplit libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/seqstat /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/seqstat libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/sfetch /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/sfetch libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/shuffle /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/shuffle libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/sindex /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/sindex libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/sreformat /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/sreformat libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/translate /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/translate libtool: warning: 'libsquid.la' has not been installed in '/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/weight /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/weight /bin/mkdir -p '/build/biosquid-1.9g+cvs20050121/debian/tmp/usr/include/biosquid' /usr/bin/install -c -m 644 dirichlet.h rk.h sqfuncs.h gki.h msa.h sre_random.h sre_stack.h ssi.h stopwatch.h vectorops.h '/build/biosquid-1.9g+cvs20050121/debian/tmp/usr/include/biosquid' /bin/mkdir -p '/build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 libsquid.pc '/build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig' make[2]: Leaving directory '/build/biosquid-1.9g+cvs20050121' make[1]: Leaving directory '/build/biosquid-1.9g+cvs20050121' rm -f debian/biosquid.debhelper.log debian/libsquid-dev.debhelper.log debian/libsquid1.debhelper.log debian/rules override_dh_install make[1]: Entering directory '/build/biosquid-1.9g+cvs20050121' mv /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/translate /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/bin/stranslate dh_install install -d debian/biosquid/usr cp --reflink=auto -a debian/tmp/usr/bin debian/biosquid/usr/ install -d debian/.debhelper/generated/biosquid install -d debian/.debhelper/generated/libsquid1 install -d debian/.debhelper/generated/libsquid-dev d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --override s/libpvm3-3-dev/pvm-dev/ \ --movedev debian/tmp/usr/include/* usr/include \ --movedev squid.h usr/include/biosquid \ --movedev squidconf.h usr/include/biosquid \ --movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/i386-linux-gnu/pkgconfig \ debian/tmp/usr/lib/*/libsquid.so Library package automatic movement utility --> pvm-dev package exists. set -e install -d -m 755 debian/libsquid-dev/usr/lib/i386-linux-gnu install -d -m 755 debian/libsquid1/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/libsquid.a debian/libsquid-dev/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/libsquid.so debian/libsquid-dev/usr/lib/i386-linux-gnu mv /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu/libsquid.so.1 debian/libsquid1/usr/lib/i386-linux-gnu mv /build/biosquid-1.9g+cvs20050121/debian/tmp/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 debian/libsquid1/usr/lib/i386-linux-gnu PKGDEV=libsquid-dev PKGSHL=libsquid1 install -d -m 755 debian/libsquid-dev/usr/include mv debian/tmp/usr/include/biosquid debian/libsquid-dev/usr/include install -d -m 755 debian/libsquid-dev/usr/include/biosquid mv squid.h debian/libsquid-dev/usr/include/biosquid install -d -m 755 debian/libsquid-dev/usr/include/biosquid mv squidconf.h debian/libsquid-dev/usr/include/biosquid install -d -m 755 debian/libsquid-dev/usr/lib/i386-linux-gnu/pkgconfig mv debian/tmp/usr/lib/*/pkgconfig/*.pc debian/libsquid-dev/usr/lib/i386-linux-gnu/pkgconfig # resolve @LICENSE@ by text in header files for HEADER in /build/biosquid-1.9g+cvs20050121/debian/libsquid-dev/usr/include/biosquid/*.h ; do \ if grep -q '@LICENSE@' ${HEADER} ; then \ sed '/@LICENSE@/,$d' ${HEADER} > ${HEADER}_tmp ; \ sed 's/^/ * /' Licenses/gnu >> ${HEADER}_tmp ; \ sed '0,/@LICENSE@/d' ${HEADER} >> ${HEADER}_tmp ; \ mv ${HEADER}_tmp ${HEADER} ; \ fi ; \ done make[1]: Leaving directory '/build/biosquid-1.9g+cvs20050121' dh_installdocs install -d debian/biosquid/usr/share/doc/biosquid install -p -m0644 debian/biosquid.README.Debian debian/biosquid/usr/share/doc/biosquid/README.Debian install -p -m0644 debian/copyright debian/biosquid/usr/share/doc/biosquid/copyright install -d debian/libsquid1/usr/share/doc/libsquid1 install -p -m0644 debian/copyright debian/libsquid1/usr/share/doc/libsquid1/copyright install -d debian/libsquid-dev/usr/share/doc/libsquid-dev cp --reflink=auto -a ./debian/README.test debian/libsquid-dev/usr/share/doc/libsquid-dev cp --reflink=auto -a ./debian/tests/run-unit-test debian/libsquid-dev/usr/share/doc/libsquid-dev chown -R 0:0 debian/libsquid-dev/usr/share/doc chmod -R u\+rw,go=rX debian/libsquid-dev/usr/share/doc install -p -m0644 debian/libsquid-dev.README.Debian debian/libsquid-dev/usr/share/doc/libsquid-dev/README.Debian install -p -m0644 debian/copyright debian/libsquid-dev/usr/share/doc/libsquid-dev/copyright dh_installchangelogs install -p -m0644 debian/changelog debian/libsquid-dev/usr/share/doc/libsquid-dev/changelog.Debian install -p -m0644 debian/changelog debian/libsquid1/usr/share/doc/libsquid1/changelog.Debian install -p -m0644 debian/changelog debian/biosquid/usr/share/doc/biosquid/changelog.Debian rm -f debian/biosquid.debhelper.log debian/libsquid-dev.debhelper.log debian/libsquid1.debhelper.log debian/rules override_dh_installexamples make[1]: Entering directory '/build/biosquid-1.9g+cvs20050121' dh_installexamples install -d debian/libsquid-dev/usr/share/doc/libsquid-dev/examples cp --reflink=auto -a ./Testsuite debian/libsquid-dev/usr/share/doc/libsquid-dev/examples cp --reflink=auto -a ./Formats debian/libsquid-dev/usr/share/doc/libsquid-dev/examples cd /build/biosquid-1.9g+cvs20050121/debian/biosquid-dev/usr/share/doc/biosquid-dev/examples/Testsuite; make clean /bin/sh: 1: cd: can't cd to /build/biosquid-1.9g+cvs20050121/debian/biosquid-dev/usr/share/doc/biosquid-dev/examples/Testsuite make[2]: Entering directory '/build/biosquid-1.9g+cvs20050121' rm -f afetch alistat compalign compstruct revcomp seqsplit seqstat sfetch shuffle sindex sreformat translate weight test -z "libsquid.la" || rm -f libsquid.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[2]: Leaving directory '/build/biosquid-1.9g+cvs20050121' sed -i 's#/usr/local/bin/perl#/usr/bin/perl#' /build/biosquid-1.9g+cvs20050121/debian/libsquid-dev/usr/share/doc/libsquid-dev/examples/Formats/*.pl make[1]: Leaving directory '/build/biosquid-1.9g+cvs20050121' rm -f debian/biosquid.debhelper.log debian/libsquid-dev.debhelper.log debian/libsquid1.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/build/biosquid-1.9g+cvs20050121' dh_installman install -d debian/biosquid/usr/share/man/man1/ install -p -m0644 ./debian/compalign.1 debian/biosquid/usr/share/man/man1/compalign.1 install -p -m0644 ./debian/revcomp.1 debian/biosquid/usr/share/man/man1/revcomp.1 install -p -m0644 ./debian/seqsplit.1 debian/biosquid/usr/share/man/man1/seqsplit.1 install -p -m0644 ./debian/stranslate.1 debian/biosquid/usr/share/man/man1/stranslate.1 install -p -m0644 ./debian/weight.1 debian/biosquid/usr/share/man/man1/weight.1 man -l --recode UTF-8 ./debian/biosquid/usr/share/man/man1/weight.1 > debian/biosquid/usr/share/man/man1/weight.1.dh-new man -l --recode UTF-8 ./debian/biosquid/usr/share/man/man1/stranslate.1 > debian/biosquid/usr/share/man/man1/stranslate.1.dh-new man -l --recode UTF-8 ./debian/biosquid/usr/share/man/man1/revcomp.1 > debian/biosquid/usr/share/man/man1/revcomp.1.dh-new man -l --recode UTF-8 ./debian/biosquid/usr/share/man/man1/compalign.1 > debian/biosquid/usr/share/man/man1/compalign.1.dh-new man -l --recode UTF-8 ./debian/biosquid/usr/share/man/man1/seqsplit.1 > debian/biosquid/usr/share/man/man1/seqsplit.1.dh-new mv debian/biosquid/usr/share/man/man1/revcomp.1.dh-new debian/biosquid/usr/share/man/man1/revcomp.1 chmod 0644 -- debian/biosquid/usr/share/man/man1/revcomp.1 mv debian/biosquid/usr/share/man/man1/weight.1.dh-new debian/biosquid/usr/share/man/man1/weight.1 chmod 0644 -- debian/biosquid/usr/share/man/man1/weight.1 mv debian/biosquid/usr/share/man/man1/seqsplit.1.dh-new debian/biosquid/usr/share/man/man1/seqsplit.1 chmod 0644 -- debian/biosquid/usr/share/man/man1/seqsplit.1 mv debian/biosquid/usr/share/man/man1/compalign.1.dh-new debian/biosquid/usr/share/man/man1/compalign.1 chmod 0644 -- debian/biosquid/usr/share/man/man1/compalign.1 mv debian/biosquid/usr/share/man/man1/stranslate.1.dh-new debian/biosquid/usr/share/man/man1/stranslate.1 chmod 0644 -- debian/biosquid/usr/share/man/man1/stranslate.1 for manpage in Man/*.man; do \ cp -a ${manpage} /build/biosquid-1.9g+cvs20050121/debian/biosquid/usr/share/man/man1/`basename ${manpage} .man`.1 ; \ done make[1]: Leaving directory '/build/biosquid-1.9g+cvs20050121' dh_perl dh_link rm -f debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1 ln -s libsquid.so.1.0.0 debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1 rm -f debian/libsquid-dev/usr/lib/i386-linux-gnu/libsquid.so ln -s libsquid.so.1.0.0 debian/libsquid-dev/usr/lib/i386-linux-gnu/libsquid.so dh_strip_nondeterminism dh_compress cd debian/biosquid cd debian/libsquid1 cd debian/libsquid-dev chmod a-x usr/share/doc/libsquid1/changelog.Debian gzip -9nf usr/share/doc/libsquid1/changelog.Debian chmod a-x usr/share/doc/biosquid/changelog.Debian usr/share/man/man1/afetch.1 usr/share/man/man1/alistat.1 usr/share/man/man1/compalign.1 usr/share/man/man1/compstruct.1 usr/share/man/man1/revcomp.1 usr/share/man/man1/seqsplit.1 usr/share/man/man1/seqstat.1 usr/share/man/man1/sfetch.1 usr/share/man/man1/shuffle.1 usr/share/man/man1/sindex.1 usr/share/man/man1/sreformat.1 usr/share/man/man1/stranslate.1 usr/share/man/man1/weight.1 cd '/build/biosquid-1.9g+cvs20050121' gzip -9nf usr/share/doc/biosquid/changelog.Debian usr/share/man/man1/afetch.1 usr/share/man/man1/alistat.1 usr/share/man/man1/compalign.1 usr/share/man/man1/compstruct.1 usr/share/man/man1/revcomp.1 usr/share/man/man1/seqsplit.1 usr/share/man/man1/seqstat.1 usr/share/man/man1/sfetch.1 usr/share/man/man1/shuffle.1 usr/share/man/man1/sindex.1 usr/share/man/man1/sreformat.1 usr/share/man/man1/stranslate.1 usr/share/man/man1/weight.1 chmod a-x usr/share/doc/libsquid-dev/changelog.Debian usr/share/doc/libsquid-dev/examples/Formats/a2m usr/share/doc/libsquid-dev/examples/Formats/embl usr/share/doc/libsquid-dev/examples/Formats/gcg usr/share/doc/libsquid-dev/examples/Formats/gcgdata.1 usr/share/doc/libsquid-dev/examples/Formats/genbank usr/share/doc/libsquid-dev/examples/Formats/msf usr/share/doc/libsquid-dev/examples/Formats/phylip usr/share/doc/libsquid-dev/examples/Formats/pir usr/share/doc/libsquid-dev/examples/Formats/stockholm.2 usr/share/doc/libsquid-dev/examples/Formats/swissprot usr/share/doc/libsquid-dev/examples/Testsuite/iospeed usr/share/doc/libsquid-dev/examples/Testsuite/iospeed_main.o usr/share/doc/libsquid-dev/examples/Testsuite/rndspeed usr/share/doc/libsquid-dev/examples/Testsuite/rndspeed_main.o usr/share/doc/libsquid-dev/examples/Testsuite/sqdconfig usr/share/doc/libsquid-dev/examples/Testsuite/sqdconfig_main.o gzip -9nf usr/share/doc/libsquid-dev/changelog.Debian usr/share/doc/libsquid-dev/examples/Formats/a2m usr/share/doc/libsquid-dev/examples/Formats/embl usr/share/doc/libsquid-dev/examples/Formats/gcg usr/share/doc/libsquid-dev/examples/Formats/gcgdata.1 usr/share/doc/libsquid-dev/examples/Formats/genbank usr/share/doc/libsquid-dev/examples/Formats/msf usr/share/doc/libsquid-dev/examples/Formats/phylip usr/share/doc/libsquid-dev/examples/Formats/pir usr/share/doc/libsquid-dev/examples/Formats/stockholm.2 usr/share/doc/libsquid-dev/examples/Formats/swissprot usr/share/doc/libsquid-dev/examples/Testsuite/iospeed usr/share/doc/libsquid-dev/examples/Testsuite/iospeed_main.o usr/share/doc/libsquid-dev/examples/Testsuite/rndspeed usr/share/doc/libsquid-dev/examples/Testsuite/rndspeed_main.o usr/share/doc/libsquid-dev/examples/Testsuite/sqdconfig usr/share/doc/libsquid-dev/examples/Testsuite/sqdconfig_main.o cd '/build/biosquid-1.9g+cvs20050121' cd '/build/biosquid-1.9g+cvs20050121' dh_fixperms find debian/biosquid -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libsquid1 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libsquid-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libsquid1 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/biosquid ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libsquid1/usr/share/doc -type f -a -true -a ! -regex 'debian/libsquid1/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libsquid-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libsquid1/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/biosquid/usr/share/doc -type f -a -true -a ! -regex 'debian/biosquid/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libsquid1 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/biosquid/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libsquid-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libsquid-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libsquid1/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/biosquid/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libsquid-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/biosquid -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/biosquid/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libsquid-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libsquid-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libsquid-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_strip strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libsquid-dev/usr/lib/i386-linux-gnu/libsquid.a install -d debian/.debhelper/libsquid1/dbgsym-root/usr/lib/debug/.build-id/cf objcopy --only-keep-debug --compress-debug-sections debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 debian/.debhelper/libsquid1/dbgsym-root/usr/lib/debug/.build-id/cf/8d7b2769e799251676b0b4ececd64a91ef8986.debug install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/stranslate debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/30/1dbabb259f68a8d6ade56e836ee6199e0ef881.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/30/1dbabb259f68a8d6ade56e836ee6199e0ef881.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/30/1dbabb259f68a8d6ade56e836ee6199e0ef881.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/stranslate objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/30/1dbabb259f68a8d6ade56e836ee6199e0ef881.debug debian/biosquid/usr/bin/stranslate install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/df objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/weight debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/df/81f3c381b723b8894918311c1bc47e08e32394.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/df/81f3c381b723b8894918311c1bc47e08e32394.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/df/81f3c381b723b8894918311c1bc47e08e32394.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/weight chmod 0644 -- debian/.debhelper/libsquid1/dbgsym-root/usr/lib/debug/.build-id/cf/8d7b2769e799251676b0b4ececd64a91ef8986.debug chown 0:0 -- debian/.debhelper/libsquid1/dbgsym-root/usr/lib/debug/.build-id/cf/8d7b2769e799251676b0b4ececd64a91ef8986.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/df/81f3c381b723b8894918311c1bc47e08e32394.debug debian/biosquid/usr/bin/weight objcopy --add-gnu-debuglink debian/.debhelper/libsquid1/dbgsym-root/usr/lib/debug/.build-id/cf/8d7b2769e799251676b0b4ececd64a91ef8986.debug debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 install -d debian/.debhelper/libsquid1/dbgsym-root/usr/share/doc ln -s libsquid1 debian/.debhelper/libsquid1/dbgsym-root/usr/share/doc/libsquid1-dbgsym install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/8e objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/seqstat debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/8e/9c1ae306bf9af5c96e2285133c8664e2d465e6.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/8e/9c1ae306bf9af5c96e2285133c8664e2d465e6.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/8e/9c1ae306bf9af5c96e2285133c8664e2d465e6.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/seqstat objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/8e/9c1ae306bf9af5c96e2285133c8664e2d465e6.debug debian/biosquid/usr/bin/seqstat install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/eb objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/sreformat debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/eb/13cac1b306288414e84a9090ac898eb05965e1.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/eb/13cac1b306288414e84a9090ac898eb05965e1.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/eb/13cac1b306288414e84a9090ac898eb05965e1.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/sreformat objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/eb/13cac1b306288414e84a9090ac898eb05965e1.debug debian/biosquid/usr/bin/sreformat install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/69 objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/sindex debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/69/0ac0cf06e2b0d33719ea95d81b6c045a97dbd5.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/69/0ac0cf06e2b0d33719ea95d81b6c045a97dbd5.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/69/0ac0cf06e2b0d33719ea95d81b6c045a97dbd5.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/sindex objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/69/0ac0cf06e2b0d33719ea95d81b6c045a97dbd5.debug debian/biosquid/usr/bin/sindex install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/ab objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/afetch debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/ab/24e9aef6683a38f9a943525344c1be24ea6c90.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/ab/24e9aef6683a38f9a943525344c1be24ea6c90.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/ab/24e9aef6683a38f9a943525344c1be24ea6c90.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/afetch objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/ab/24e9aef6683a38f9a943525344c1be24ea6c90.debug debian/biosquid/usr/bin/afetch install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/1f objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/sfetch debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/1f/b237250b15c29fca714410b72ee021319fa125.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/1f/b237250b15c29fca714410b72ee021319fa125.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/1f/b237250b15c29fca714410b72ee021319fa125.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/sfetch objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/1f/b237250b15c29fca714410b72ee021319fa125.debug debian/biosquid/usr/bin/sfetch install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/81 objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/compstruct debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/81/f0b9bd6c973e53d0cb7a1a726df32a49a9fa20.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/81/f0b9bd6c973e53d0cb7a1a726df32a49a9fa20.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/81/f0b9bd6c973e53d0cb7a1a726df32a49a9fa20.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/compstruct objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/81/f0b9bd6c973e53d0cb7a1a726df32a49a9fa20.debug debian/biosquid/usr/bin/compstruct install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/c4 objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/seqsplit debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/c4/43a98ad085c73b4021fca697e8ae8ffd013e4d.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/c4/43a98ad085c73b4021fca697e8ae8ffd013e4d.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/c4/43a98ad085c73b4021fca697e8ae8ffd013e4d.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/seqsplit objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/c4/43a98ad085c73b4021fca697e8ae8ffd013e4d.debug debian/biosquid/usr/bin/seqsplit install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/9d objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/compalign debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/9d/586eaa72ac74558771c4270a0331d0541a355c.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/9d/586eaa72ac74558771c4270a0331d0541a355c.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/9d/586eaa72ac74558771c4270a0331d0541a355c.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/compalign objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/9d/586eaa72ac74558771c4270a0331d0541a355c.debug debian/biosquid/usr/bin/compalign install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/alistat debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/58/ac0f295a03e022ccbde21205a4fb59a3d03f74.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/58/ac0f295a03e022ccbde21205a4fb59a3d03f74.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/58/ac0f295a03e022ccbde21205a4fb59a3d03f74.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/alistat objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/58/ac0f295a03e022ccbde21205a4fb59a3d03f74.debug debian/biosquid/usr/bin/alistat install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/revcomp debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/44/e02221dbabcaf3f22312a573aa238f32a67a19.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/44/e02221dbabcaf3f22312a573aa238f32a67a19.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/44/e02221dbabcaf3f22312a573aa238f32a67a19.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/revcomp objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/44/e02221dbabcaf3f22312a573aa238f32a67a19.debug debian/biosquid/usr/bin/revcomp install -d debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/cf objcopy --only-keep-debug --compress-debug-sections debian/biosquid/usr/bin/shuffle debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/cf/e41f986af4c13a2dbe554d68163ee749c18dae.debug chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/cf/e41f986af4c13a2dbe554d68163ee749c18dae.debug chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/cf/e41f986af4c13a2dbe554d68163ee749c18dae.debug strip --remove-section=.comment --remove-section=.note debian/biosquid/usr/bin/shuffle objcopy --add-gnu-debuglink debian/.debhelper/biosquid/dbgsym-root/usr/lib/debug/.build-id/cf/e41f986af4c13a2dbe554d68163ee749c18dae.debug debian/biosquid/usr/bin/shuffle install -d debian/.debhelper/biosquid/dbgsym-root/usr/share/doc ln -s biosquid debian/.debhelper/biosquid/dbgsym-root/usr/share/doc/biosquid-dbgsym dh_makeshlibs rm -f debian/biosquid/DEBIAN/shlibs rm -f debian/libsquid1/DEBIAN/shlibs install -d debian/libsquid1/DEBIAN echo "libsquid 1 libsquid1" >> debian/libsquid1/DEBIAN/shlibs chmod 0644 -- debian/libsquid1/DEBIAN/shlibs chown 0:0 -- debian/libsquid1/DEBIAN/shlibs mv debian/.debhelper/generated/libsquid1/triggers.new debian/.debhelper/generated/libsquid1/triggers rm -f debian/libsquid-dev/DEBIAN/shlibs dh_shlibdeps dpkg-shlibdeps -Tdebian/libsquid1.substvars debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 install -d debian/biosquid/DEBIAN dpkg-shlibdeps -Tdebian/biosquid.substvars debian/biosquid/usr/bin/stranslate debian/biosquid/usr/bin/weight debian/biosquid/usr/bin/seqstat debian/biosquid/usr/bin/sreformat debian/biosquid/usr/bin/sindex debian/biosquid/usr/bin/afetch debian/biosquid/usr/bin/sfetch debian/biosquid/usr/bin/compstruct debian/biosquid/usr/bin/seqsplit debian/biosquid/usr/bin/compalign debian/biosquid/usr/bin/alistat debian/biosquid/usr/bin/revcomp debian/biosquid/usr/bin/shuffle dpkg-shlibdeps: warning: symbol exp used by debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol pow used by debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol sqrt used by debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol log used by debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol tan used by debian/libsquid1/usr/lib/i386-linux-gnu/libsquid.so.1.0.0 found in none of the libraries dh_installdeb install -p -m0644 debian/.debhelper/generated/libsquid1/triggers debian/libsquid1/DEBIAN/triggers install -d debian/libsquid-dev/DEBIAN dh_gencontrol echo misc:Depends= >> debian/libsquid-dev.substvars echo misc:Pre-Depends= >> debian/libsquid-dev.substvars dpkg-gencontrol -plibsquid-dev -ldebian/changelog -Tdebian/libsquid-dev.substvars -Pdebian/libsquid-dev -UMulti-Arch echo misc:Depends= >> debian/libsquid1.substvars echo misc:Pre-Depends= >> debian/libsquid1.substvars install -d debian/.debhelper/libsquid1/dbgsym-root/DEBIAN dpkg-gencontrol -plibsquid1 -ldebian/changelog -Tdebian/libsquid1.substvars -Pdebian/.debhelper/libsquid1/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=libsquid1-dbgsym "-DDepends=libsquid1 (= \${binary:Version})" "-DDescription=debug symbols for libsquid1" -DBuild-Ids=cf8d7b2769e799251676b0b4ececd64a91ef8986 -DSection=debug -UMulti-Arch -UReplaces -UBreaks echo misc:Depends= >> debian/biosquid.substvars echo misc:Pre-Depends= >> debian/biosquid.substvars install -d debian/.debhelper/biosquid/dbgsym-root/DEBIAN dpkg-gencontrol -pbiosquid -ldebian/changelog -Tdebian/biosquid.substvars -Pdebian/.debhelper/biosquid/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=biosquid-dbgsym "-DDepends=biosquid (= \${binary:Version})" "-DDescription=debug symbols for biosquid" "-DBuild-Ids=1fb237250b15c29fca714410b72ee021319fa125 301dbabb259f68a8d6ade56e836ee6199e0ef881 44e02221dbabcaf3f22312a573aa238f32a67a19 58ac0f295a03e022ccbde21205a4fb59a3d03f74 690ac0cf06e2b0d33719ea95d81b6c045a97dbd5 81f0b9bd6c973e53d0cb7a1a726df32a49a9fa20 8e9c1ae306bf9af5c96e2285133c8664e2d465e6 9d586eaa72ac74558771c4270a0331d0541a355c ab24e9aef6683a38f9a943525344c1be24ea6c90 c443a98ad085c73b4021fca697e8ae8ffd013e4d cfe41f986af4c13a2dbe554d68163ee749c18dae df81f3c381b723b8894918311c1bc47e08e32394 eb13cac1b306288414e84a9090ac898eb05965e1" -DSection=debug -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: Depends field of package libsquid-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package libsquid-dev: substitution variable ${devlibs:Depends} unused, but is defined chmod 0644 -- debian/libsquid-dev/DEBIAN/control chown 0:0 -- debian/libsquid-dev/DEBIAN/control chmod 0644 -- debian/.debhelper/libsquid1/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/libsquid1/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibsquid1 -ldebian/changelog -Tdebian/libsquid1.substvars -Pdebian/libsquid1 -UMulti-Arch chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/DEBIAN/control dpkg-gencontrol -pbiosquid -ldebian/changelog -Tdebian/biosquid.substvars -Pdebian/biosquid -UMulti-Arch chmod 0644 -- debian/libsquid1/DEBIAN/control chown 0:0 -- debian/libsquid1/DEBIAN/control chmod 0644 -- debian/biosquid/DEBIAN/control chown 0:0 -- debian/biosquid/DEBIAN/control dh_md5sums cd debian/biosquid >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libsquid1 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libsquid-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/biosquid/DEBIAN/md5sums chown 0:0 -- debian/biosquid/DEBIAN/md5sums chmod 0644 -- debian/libsquid1/DEBIAN/md5sums chown 0:0 -- debian/libsquid1/DEBIAN/md5sums cd debian/.debhelper/libsquid1/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libsquid-dev/DEBIAN/md5sums chown 0:0 -- debian/libsquid-dev/DEBIAN/md5sums cd debian/.debhelper/biosquid/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libsquid1/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/libsquid1/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/biosquid/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/biosquid/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/.debhelper/biosquid/dbgsym-root .. dpkg-deb --build debian/biosquid .. dpkg-deb --build debian/libsquid1 .. dpkg-deb --build debian/.debhelper/libsquid1/dbgsym-root .. dpkg-deb --build debian/libsquid-dev .. dpkg-deb: building package 'biosquid-dbgsym' in '../biosquid-dbgsym_1.9g+cvs20050121-11_i386.deb'. dpkg-deb: building package 'libsquid1' in '../libsquid1_1.9g+cvs20050121-11_i386.deb'. dpkg-deb: building package 'biosquid' in '../biosquid_1.9g+cvs20050121-11_i386.deb'. dpkg-deb: building package 'libsquid-dev' in '../libsquid-dev_1.9g+cvs20050121-11_i386.deb'. dpkg-deb: building package 'libsquid1-dbgsym' in '../libsquid1-dbgsym_1.9g+cvs20050121-11_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../biosquid_1.9g+cvs20050121-11_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/14751 and its subdirectories I: Current time: Fri Jun 28 13:16:00 -12 2019 I: pbuilder-time-stamp: 1561770960 Sat Jun 29 01:16:00 UTC 2019 I: 1st build successful. Starting 2nd build on remote node profitbricks-build6-i386.debian.net. Sat Jun 29 01:16:00 UTC 2019 I: Preparing to do remote build '2' on profitbricks-build6-i386.debian.net. Sat Jun 29 01:16:39 UTC 2019 I: Deleting $TMPDIR on profitbricks-build6-i386.debian.net. Sat Jun 29 01:16:39 UTC 2019 I: biosquid_1.9g+cvs20050121-11_i386.changes: Format: 1.8 Date: Sat, 18 Aug 2018 08:06:54 +0200 Source: biosquid Binary: biosquid biosquid-dbgsym libsquid-dev libsquid1 libsquid1-dbgsym Architecture: i386 Version: 1.9g+cvs20050121-11 Distribution: unstable Urgency: medium Maintainer: Debian-Med Packaging Team Changed-By: Andreas Tille Description: biosquid - utilities for biological sequence analysis libsquid-dev - biosquid headers and static library for biological sequence analy libsquid1 - biosquid dynamic library for biological sequence analysis Closes: 906454 Changes: biosquid (1.9g+cvs20050121-11) unstable; urgency=medium . * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.2.0 * Fix LDADD in Makefile.am Closes: #906454 * d/rules: - Drop --no-parallel - Do not parse d/changelog Checksums-Sha1: 3598d3eb51712cff57e962bdcca848c72c8b9b4f 182220 biosquid-dbgsym_1.9g+cvs20050121-11_i386.deb 7d0f628d2cd01dd87f55c5ca8ed0741614e9e160 6284 biosquid_1.9g+cvs20050121-11_i386.buildinfo 8a9c9b21a0950b184340f6e4bf53f32cc3e152b1 78680 biosquid_1.9g+cvs20050121-11_i386.deb 6c590b4e2594391ba8e1bdc8e5fb5c44ccddfeb0 393212 libsquid-dev_1.9g+cvs20050121-11_i386.deb 9fa2d956c27c9d2f92454089f755fc7689f269f2 167160 libsquid1-dbgsym_1.9g+cvs20050121-11_i386.deb 93ef9df85c9041a490dd26c0e86b513cd15d2f5f 81072 libsquid1_1.9g+cvs20050121-11_i386.deb Checksums-Sha256: c08a4cfb2e1d961ae0e02b5264f6902307ae039e0f88d217aad2115b5fcb8bbf 182220 biosquid-dbgsym_1.9g+cvs20050121-11_i386.deb 6b7a0dc082adc371c5e75f1465594c7c5d19cd21a783a10816eecfd53db6b958 6284 biosquid_1.9g+cvs20050121-11_i386.buildinfo b8b228b1d2cf5e9bea29e19fc707e9ed3ac22376b3103dd770039fee123edb58 78680 biosquid_1.9g+cvs20050121-11_i386.deb 3244693d2926e85978c27e221096b9e21f406c468426f0cfdbc61b6ee9587019 393212 libsquid-dev_1.9g+cvs20050121-11_i386.deb 40ff3497304cb6c41512df3a4d5019372fd1adebcdc10fdd0a14deb1b8c72c5f 167160 libsquid1-dbgsym_1.9g+cvs20050121-11_i386.deb 88beb56a354ab3d45579e4c60a4ec7465d6325d22ea2612f1840c4cbea92e42a 81072 libsquid1_1.9g+cvs20050121-11_i386.deb Files: 9490c68214f2a5b7df1e4879900469aa 182220 debug optional biosquid-dbgsym_1.9g+cvs20050121-11_i386.deb 061c770a04cc1816b8da8afcd0eb48c7 6284 science optional biosquid_1.9g+cvs20050121-11_i386.buildinfo 15648f89e3c735d16f4b296d68020a3d 78680 science optional biosquid_1.9g+cvs20050121-11_i386.deb b7a08c8c7e7d43fe09a6e71f6389a1fc 393212 libdevel optional libsquid-dev_1.9g+cvs20050121-11_i386.deb 21dd32c8f3fd9680661f7d5bad51172c 167160 debug optional libsquid1-dbgsym_1.9g+cvs20050121-11_i386.deb 9af406ccb89a6386e534803376b4a20e 81072 libs optional libsquid1_1.9g+cvs20050121-11_i386.deb Sat Jun 29 01:16:41 UTC 2019 I: diffoscope 115 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.OS75nODxpy/biosquid_1.9g+cvs20050121-11.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.OS75nODxpy/biosquid_1.9g+cvs20050121-11.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.OS75nODxpy/biosquid_1.9g+cvs20050121-11.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.OS75nODxpy/b1/biosquid_1.9g+cvs20050121-11_i386.changes /srv/reproducible-results/rbuild-debian/tmp.OS75nODxpy/b2/biosquid_1.9g+cvs20050121-11_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.225s) 0.225s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.029s) 0.029s 10 calls diffoscope.comparators.binary.FilesystemFile Sat Jun 29 01:16:42 UTC 2019 I: diffoscope 115 found no differences in the changes files, and a .buildinfo file also exists. Sat Jun 29 01:16:42 UTC 2019 I: biosquid from buster built successfully and reproducibly on i386. Sat Jun 29 01:16:44 UTC 2019 I: Submitting .buildinfo files to external archives: Sat Jun 29 01:16:44 UTC 2019 I: Submitting 8.0K b1/biosquid_1.9g+cvs20050121-11_i386.buildinfo.asc Sat Jun 29 01:16:45 UTC 2019 I: Submitting 8.0K b2/biosquid_1.9g+cvs20050121-11_i386.buildinfo.asc Sat Jun 29 01:16:47 UTC 2019 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jun 29 01:16:47 UTC 2019 I: Done submitting .buildinfo files. Sat Jun 29 01:16:47 UTC 2019 I: Removing signed biosquid_1.9g+cvs20050121-11_i386.buildinfo.asc files: removed './b1/biosquid_1.9g+cvs20050121-11_i386.buildinfo.asc' removed './b2/biosquid_1.9g+cvs20050121-11_i386.buildinfo.asc'