Wed Oct 14 17:57:58 UTC 2020 I: starting to build edtsurf/buster/i386 on jenkins on '2020-10-14 17:57' Wed Oct 14 17:57:58 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_7/11181/console.log Wed Oct 14 17:57:58 UTC 2020 I: Downloading source for buster/edtsurf=0.2009-6 --2020-10-14 17:57:58-- http://deb.debian.org/debian/pool/main/e/edtsurf/edtsurf_0.2009-6.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1971 (1.9K) Saving to: ‘edtsurf_0.2009-6.dsc’ 0K . 100% 406M=0s 2020-10-14 17:57:58 (406 MB/s) - ‘edtsurf_0.2009-6.dsc’ saved [1971/1971] Wed Oct 14 17:57:59 UTC 2020 I: edtsurf_0.2009-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: edtsurf Binary: edtsurf Architecture: any Version: 0.2009-6 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille Homepage: http://zhanglab.ccmb.med.umich.edu/EDTSurf/ Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/edtsurf Vcs-Git: https://salsa.debian.org/med-team/edtsurf.git Build-Depends: debhelper (>= 11~) Package-List: edtsurf deb science optional arch=any Checksums-Sha1: f052d417db24a706866dd2f98c069f026c575c7a 38539 edtsurf_0.2009.orig.tar.gz 414d987409957d5617747351f41480caafe83510 3916 edtsurf_0.2009-6.debian.tar.xz Checksums-Sha256: 9025455d00d967016fd50635d4bf550d78097ee9160ca33e3e6246b9b21bea7a 38539 edtsurf_0.2009.orig.tar.gz 812983bface8ab6ce2bc8339c751be1bf1b33d6207d2936d781c95eac50142fa 3916 edtsurf_0.2009-6.debian.tar.xz Files: ed09afbe1a3673aaa8095bfdd69454a2 38539 edtsurf_0.2009.orig.tar.gz d71ae6a50f0227714b39d3516e06cc72 3916 edtsurf_0.2009-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlvK818RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFl1w//UYQBVjoMCa1Tc9gxWKgqqp019n9+fTMJ /xZUBUiUUzpvyDFNqXRIHN2uDnGIm6rv6rrLjAcoHIvCZDmmNej/qPXrODOWbfjd Rhj+NXp5liBTrwG2WPRTylp0DqJIRz5YMO11sVyrg5j9WDOU5qN7nCU7bZyXtFb8 0D5K5oEdkoUd3K4DnbmPBeCnYcDea2nHZsD/P8UrykM8j2ttpO7IsHSew0OKFVsC tvpBNDUgLQ65DP6YW8VzoJlwX5AyLC2Q6ls0UqxOpZtBkLWD0L4QPjTftDeGZiFx TcMRMxTlrNCew7CiwZ2yQu4oLC+vHtsSTlWUIgqn8PIAp0Pet9N/pq4D/FS578IQ z56M7O8Q7xxEVLHC23nqR+o0b/CEgGO9FECvacEb9gP/ltQs2ug8//BALukvEVmp mtWab16F/6v0TSg5QYSobqWYVBRUlL5q67tGYS0ZOD+F86tP+4RQwlPQxjN2A+7L eFMldVxrLPxkxe2KT00jbv4XidRHRXTAuC0qstqvqD98RudHqALmFf1KPNZK8t1s q+K+B0lrXU0VrZxlVurRKzYDHe6KRetX539LfIp05nNhxo78lX2Ccy2PhxPH3NaW D2LwYSuiYFlX5aRQjQopDgWHJUEQUGH6erFAq44hPmX6lgmXkeXXiYxhbIAY9vcu l+wlX3/NahE= =B7tX -----END PGP SIGNATURE----- Wed Oct 14 17:57:59 UTC 2020 I: Checking whether the package is not for us Wed Oct 14 17:57:59 UTC 2020 I: Starting 1st build on remote node profitbricks-build12-i386.debian.net. Wed Oct 14 17:57:59 UTC 2020 I: Preparing to do remote build '1' on profitbricks-build12-i386.debian.net. Wed Oct 14 18:00:08 UTC 2020 I: Deleting $TMPDIR on profitbricks-build12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Oct 14 05:58:00 -12 2020 I: pbuilder-time-stamp: 1602698280 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [edtsurf_0.2009-6.dsc] I: copying [./edtsurf_0.2009.orig.tar.gz] I: copying [./edtsurf_0.2009-6.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Oct 19 21:20:31 2018 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./edtsurf_0.2009-6.dsc dpkg-source: info: extracting edtsurf in edtsurf-0.2009 dpkg-source: info: unpacking edtsurf_0.2009.orig.tar.gz dpkg-source: info: unpacking edtsurf_0.2009-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying CFLAGS_missing_in_Makefile.patch dpkg-source: info: applying fix-use-of-unsigned-char.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/11603/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='13e4514387644ad0a399802a817a614b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='11603' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.YENttGWrTs/pbuilderrc_MJDg --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.YENttGWrTs/b1 --logfile b1/build.log edtsurf_0.2009-6.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux profitbricks-build12-i386 4.19.0-11-686-pae #1 SMP Debian 4.19.146-1 (2020-09-17) i686 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1302248 Apr 17 2019 bash -rwxr-xr-x 3 root root 38280 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 17768 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 38692 Feb 28 2019 cat -rwxr-xr-x 1 root root 75588 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 63268 Feb 28 2019 chmod -rwxr-xr-x 1 root root 75588 Feb 28 2019 chown -rwxr-xr-x 1 root root 153732 Feb 28 2019 cp -rwxr-xr-x 1 root root 132820 Jan 17 2019 dash -rwxr-xr-x 1 root root 120676 Feb 28 2019 date -rwxr-xr-x 1 root root 92040 Feb 28 2019 dd -rwxr-xr-x 1 root root 100620 Feb 28 2019 df -rwxr-xr-x 1 root root 149736 Feb 28 2019 dir -rwxr-xr-x 1 root root 79412 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 34532 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 34532 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 67700 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 30112 Apr 22 07:38 fusermount -rwxr-xr-x 1 root root 206392 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 100952 Jan 5 2019 gzip -rwxr-xr-x 1 root root 21916 Sep 26 2018 hostname -rwxr-xr-x 1 root root 79752 Feb 28 2019 ln -rwxr-xr-x 1 root root 55400 Jul 26 2018 login -rwxr-xr-x 1 root root 149736 Feb 28 2019 ls -rwxr-xr-x 1 root root 112032 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 87972 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 79748 Feb 28 2019 mknod -rwxr-xr-x 1 root root 46916 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 42348 Jan 9 2019 more -rwsr-xr-x 1 root root 50592 Jan 9 2019 mount -rwxr-xr-x 1 root root 13724 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 157832 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38660 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 46852 Feb 28 2019 readlink -rwxr-xr-x 1 root root 75588 Feb 28 2019 rm -rwxr-xr-x 1 root root 42756 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 22276 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Oct 6 20:27 sh -> dash -rwxr-xr-x 1 root root 34532 Feb 28 2019 sleep -rwxr-xr-x 1 root root 79652 Feb 28 2019 stty -rwsr-xr-x 1 root root 71072 Jan 9 2019 su -rwxr-xr-x 1 root root 34564 Feb 28 2019 sync -rwxr-xr-x 1 root root 504024 Apr 23 2019 tar -rwxr-xr-x 1 root root 13860 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 104292 Feb 28 2019 touch -rwxr-xr-x 1 root root 34532 Feb 28 2019 true -rwxr-xr-x 1 root root 17768 Apr 22 07:38 ulockmgr_server -rwsr-xr-x 1 root root 30108 Jan 9 2019 umount -rwxr-xr-x 1 root root 34532 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 149736 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34208 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/11603/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libcroco3{a} libelf1{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libicu63{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libpipeline1{a} libsigsegv2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 33 newly installed, 0 to remove and 0 not upgraded. Need to get 19.4 MB of archives. After unpacking 70.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2 [104 kB] Get: 2 http://deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3 [935 kB] Get: 5 http://deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 8 http://deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4+deb10u1 [242 kB] Get: 9 http://deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4+deb10u1 [124 kB] Get: 10 http://deb.debian.org/debian buster/main i386 file i386 1:5.35-4+deb10u1 [66.3 kB] Get: 11 http://deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 12 http://deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 13 http://deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 14 http://deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 15 http://deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 16 http://deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 17 http://deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 18 http://deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 19 http://deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 20 http://deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 21 http://deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 22 http://deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 23 http://deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 24 http://deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 25 http://deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2+deb10u2 [1334 kB] Get: 26 http://deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6+deb10u1 [8451 kB] Get: 27 http://deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+b3 [721 kB] Get: 28 http://deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 29 http://deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2+deb10u2 [109 kB] Get: 30 http://deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 31 http://deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 32 http://deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 33 http://deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Fetched 19.4 MB in 1s (18.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../02-libuchardet0_0.0.6-3_i386.deb ... Unpacking libuchardet0:i386 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_i386.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../04-libpipeline1_1.5.1-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_i386.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../07-libmagic-mgc_1%3a5.35-4+deb10u1_i386.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../08-libmagic1_1%3a5.35-4+deb10u1_i386.deb ... Unpacking libmagic1:i386 (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../09-file_1%3a5.35-4+deb10u1_i386.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../10-gettext-base_0.19.8.1-9_i386.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../11-libsigsegv2_2.12-2_i386.deb ... Unpacking libsigsegv2:i386 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.18-2_i386.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../22-libelf1_0.176-1.1_i386.deb ... Unpacking libelf1:i386 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.12-3_i386.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:i386. Preparing to unpack .../24-libglib2.0-0_2.58.3-2+deb10u2_i386.deb ... Unpacking libglib2.0-0:i386 (2.58.3-2+deb10u2) ... Selecting previously unselected package libicu63:i386. Preparing to unpack .../25-libicu63_63.1-6+deb10u1_i386.deb ... Unpacking libicu63:i386 (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../26-libxml2_2.9.4+dfsg1-7+b3_i386.deb ... Unpacking libxml2:i386 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libcroco3:i386. Preparing to unpack .../27-libcroco3_0.6.12-3_i386.deb ... Unpacking libcroco3:i386 (0.6.12-3) ... 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Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/edtsurf-0.2009/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package edtsurf dpkg-buildpackage: info: source version 0.2009-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean dh_auto_clean debian/rules override_dh_clean make[1]: Entering directory '/build/edtsurf-0.2009' dh_clean rm -f EDTSurf make[1]: Leaving directory '/build/edtsurf-0.2009' debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j10 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/edtsurf-0.2009' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/edtsurf-0.2009=. -fstack-protector-strong -Wformat -Werror=format-security -c ParsePDB.cpp -o ParsePDB.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/edtsurf-0.2009=. -fstack-protector-strong -Wformat -Werror=format-security -c ProteinSurface.cpp -o ProteinSurface.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/edtsurf-0.2009=. -fstack-protector-strong -Wformat -Werror=format-security -c EDTSurf.cpp -o EDTSurf.o ParsePDB.cpp: In member function 'bool ParsePDB::loadpdb(char*)': ParsePDB.cpp:1462:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets(oneline,255,filein); ~~~~~^~~~~~~~~~~~~~~~~~~~ EDTSurf.cpp: In function 'int main(int, char**)': EDTSurf.cpp:400:20: warning: '-cav.pdb' directive writing 8 bytes into a region of size between 1 and 200 [-Wformat-overflow=] sprintf(filename,"%s-cav.pdb",tpname); ^~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from CommonPara.h:10, from EDTSurf.cpp:9: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 9 and 208 bytes into a destination of size 200 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ EDTSurf.cpp:408:19: warning: '.ply' directive writing 4 bytes into a region of size between 1 and 200 [-Wformat-overflow=] sprintf(filename,"%s.ply",tpname); ^~~~~~~~ In file included from /usr/include/stdio.h:873, from CommonPara.h:10, from EDTSurf.cpp:9: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 5 and 204 bytes into a destination of size 200 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ EDTSurf.cpp:413:20: warning: '.asa' directive writing 4 bytes into a region of size between 1 and 200 [-Wformat-overflow=] sprintf(filename,"%s.asa",tpname); ^~~~~~~~ In file included from /usr/include/stdio.h:873, from CommonPara.h:10, from EDTSurf.cpp:9: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 5 and 204 bytes into a destination of size 200 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ EDTSurf.cpp:354:20: warning: '_atom.dep' directive writing 9 bytes into a region of size between 1 and 200 [-Wformat-overflow=] sprintf(filename,"%s_atom.dep",tpname); ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from CommonPara.h:10, from EDTSurf.cpp:9: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 10 and 209 bytes into a destination of size 200 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ EDTSurf.cpp:363:20: warning: '_res.dep' directive writing 8 bytes into a region of size between 1 and 200 [-Wformat-overflow=] sprintf(filename,"%s_res.dep",tpname); ^~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from CommonPara.h:10, from EDTSurf.cpp:9: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 9 and 208 bytes into a destination of size 200 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ParsePDB.cpp: In member function 'void ParsePDB::splitpdb()': ParsePDB.cpp:1524:19: warning: '%d' directive writing between 2 and 10 bytes into a region of size 3 [-Wformat-overflow=] sprintf(tmpn,"%d",i); ^~~~ ParsePDB.cpp:1524:19: note: directive argument in the range [10, 2147483647] In file included from /usr/include/stdio.h:873, from CommonPara.h:10, from ParsePDB.cpp:12: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 3 and 11 bytes into a destination of size 3 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wl,-z,relro -Wl,-z,now ParsePDB.o ProteinSurface.o EDTSurf.o -o EDTSurf rm *.o make[1]: Leaving directory '/build/edtsurf-0.2009' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'edtsurf' in '../edtsurf_0.2009-6_i386.deb'. dpkg-deb: building package 'edtsurf-dbgsym' in '../edtsurf-dbgsym_0.2009-6_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../edtsurf_0.2009-6_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/11603 and its subdirectories I: Current time: Wed Oct 14 06:00:07 -12 2020 I: pbuilder-time-stamp: 1602698407 Wed Oct 14 18:00:08 UTC 2020 I: 1st build successful. Starting 2nd build on remote node profitbricks-build16-i386.debian.net. Wed Oct 14 18:00:08 UTC 2020 I: Preparing to do remote build '2' on profitbricks-build16-i386.debian.net. Wed Oct 14 18:00:33 UTC 2020 I: Deleting $TMPDIR on profitbricks-build16-i386.debian.net. Wed Oct 14 18:00:33 UTC 2020 I: edtsurf_0.2009-6_i386.changes: Format: 1.8 Date: Sat, 20 Oct 2018 11:07:58 +0200 Source: edtsurf Binary: edtsurf edtsurf-dbgsym Architecture: i386 Version: 0.2009-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: edtsurf - triangulated mesh surfaces for protein structures Changes: edtsurf (0.2009-6) unstable; urgency=medium . [ Steffen Moeller ] * d/u/metadata: yamllint cleanliness . [ Andreas Tille ] * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.2.1 Checksums-Sha1: e4910f0a2b77a4ec77dbf0c9e2386cc74d486d35 101504 edtsurf-dbgsym_0.2009-6_i386.deb f383a768e1e996eef8e9e98b9b4c641986fc9634 4609 edtsurf_0.2009-6_i386.buildinfo e46d12bb2b8299f53cbeedee6efebae57f416b84 59552 edtsurf_0.2009-6_i386.deb Checksums-Sha256: 081bbe104780db030f2b42986ce9fad221290ddebf7672513a5171d1c75c2d3a 101504 edtsurf-dbgsym_0.2009-6_i386.deb e7fa08b567e98ee4784f9bc452ea46b21a2e651ae729a0367ae7934a8d55e198 4609 edtsurf_0.2009-6_i386.buildinfo 78e64b73763284d12da1d66179e0c7738b325fd499cde70a85439ce50f3136f0 59552 edtsurf_0.2009-6_i386.deb Files: 5b6fb9d3d9d29a5c105d53d8983f49c3 101504 debug optional edtsurf-dbgsym_0.2009-6_i386.deb 631ec0c7c235b52032913a7452c3706c 4609 science optional edtsurf_0.2009-6_i386.buildinfo c2d808a4f4ff7fad27dbdaa3f86a24a9 59552 science optional edtsurf_0.2009-6_i386.deb Wed Oct 14 18:00:34 UTC 2020 I: diffoscope 160 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.YENttGWrTs/edtsurf_0.2009-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.YENttGWrTs/edtsurf_0.2009-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.YENttGWrTs/edtsurf_0.2009-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.YENttGWrTs/b1/edtsurf_0.2009-6_i386.changes /srv/reproducible-results/rbuild-debian/tmp.YENttGWrTs/b2/edtsurf_0.2009-6_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.214s) 0.214s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.026s) 0.026s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Wed Oct 14 18:00:39 UTC 2020 I: diffoscope 160 found no differences in the changes files, and a .buildinfo file also exists. Wed Oct 14 18:00:39 UTC 2020 I: edtsurf from buster built successfully and reproducibly on i386. Wed Oct 14 18:00:40 UTC 2020 I: Submitting .buildinfo files to external archives: Wed Oct 14 18:00:40 UTC 2020 I: Submitting 8.0K b1/edtsurf_0.2009-6_i386.buildinfo.asc Wed Oct 14 18:00:42 UTC 2020 I: Submitting 8.0K b2/edtsurf_0.2009-6_i386.buildinfo.asc Wed Oct 14 18:00:43 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Oct 14 18:00:43 UTC 2020 I: Done submitting .buildinfo files. Wed Oct 14 18:00:43 UTC 2020 I: Removing signed edtsurf_0.2009-6_i386.buildinfo.asc files: removed './b1/edtsurf_0.2009-6_i386.buildinfo.asc' removed './b2/edtsurf_0.2009-6_i386.buildinfo.asc'