Mon Aug 10 15:12:58 UTC 2020 I: starting to build mpb/buster/i386 on jenkins on '2020-08-10 15:12' Mon Aug 10 15:12:58 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_15/5745/console.log Mon Aug 10 15:12:58 UTC 2020 I: Downloading source for buster/mpb=1.7.0-5 --2020-08-10 15:12:58-- http://deb.debian.org/debian/pool/main/m/mpb/mpb_1.7.0-5.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2267 (2.2K) Saving to: ‘mpb_1.7.0-5.dsc’ 0K .. 100% 136M=0s 2020-08-10 15:12:58 (136 MB/s) - ‘mpb_1.7.0-5.dsc’ saved [2267/2267] Mon Aug 10 15:12:58 UTC 2020 I: mpb_1.7.0-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: mpb Binary: mpb, mpb-mpi, mpb-doc, mpb-dev, mpb-scm Architecture: any all Version: 1.7.0-5 Maintainer: Thorsten Alteholz Homepage: https://mpb.readthedocs.io Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/alteholz/mpb Vcs-Git: https://salsa.debian.org/alteholz/mpb.git Build-Depends: debhelper (>= 11), liblapack-dev, libfftw3-dev (>= 3.3), libctl-dev (>= 4.1.4), gfortran, guile-2.2-dev, mpi-default-dev, libhdf5-mpi-dev, libfftw3-mpi-dev, quilt Package-List: mpb deb science optional arch=any mpb-dev deb devel optional arch=any mpb-doc deb doc optional arch=all mpb-mpi deb science optional arch=any mpb-scm deb science optional arch=all Checksums-Sha1: beea61d928c773e4a008f4c2d3f600f6322a3948 1052539 mpb_1.7.0.orig.tar.gz 6fc01b59e5aea169cee4f4e0d591e9c998cef97e 144956 mpb_1.7.0-5.debian.tar.xz Checksums-Sha256: 9b9b23b079f656d6c758da034822f7ab6b4128fb6c907c8506fa38b786908c7e 1052539 mpb_1.7.0.orig.tar.gz 62607479dc30b75a4ce76b9f8895e5f4be689b6a35739cff8b0679fbb0cd534f 144956 mpb_1.7.0-5.debian.tar.xz Files: a7dc5cd2fabb39aaa2ca31cf73cd788a 1052539 mpb_1.7.0.orig.tar.gz be122b5d27891ce8a61a46367a1bb933 144956 mpb_1.7.0-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQKnBAEBCgCRFiEEYgH7/9u94Hgi6ruWlvysDTh7WEcFAlxUyO9fFIAAAAAALgAo aXNzdWVyLWZwckBub3RhdGlvbnMub3BlbnBncC5maWZ0aGhvcnNlbWFuLm5ldDYy MDFGQkZGREJCREUwNzgyMkVBQkI5Njk2RkNBQzBEMzg3QjU4NDcTHGRlYmlhbkBh bHRlaG9sei5kZQAKCRCW/KwNOHtYRxX+D/0Qv0DQ/e0qAR2597ydP+isaVC7Z5sH bgc3VxQVCG4th/OFH/5DPy87WGbZ0fhWvMlXi8qnSr/SaG8tCvY/GR3xWvQ+I/1i xollA4SXUtlsTrqk4iIbojB7VzGlT5MGpzLLK+YHwbtqIfqLRM3DjFw3yUEU9UnT cYCxznOODj/R2GBliLqmNk+hgyvQeuRRn2WAt+kHTNqMH7A5YcVFLrlYa4vd103f TFE+vo8jMjksUGxlS+xQxf8AkYFunUIJxA2Vzl4c0FDxzcQLr1mRdbpmM48L7G1H Suz1SNL56cYpzOSJXNuwYgu/ZHCJk6cGjkcXsW5mQ+aDQ1n+qxN5SUrCHTq10nhH VfdrFuEoWTciDzLyCjJ5cxL36XegXdVGzXrMQKetegIc/GVDTfYLv+n+Whm3xI+k g+i/sIvFIbwonKxvezudcXdSPldTBQlT16gqWBY7FZb3F6inEAtbPBAJzok+kmtH 9sNYRlY7za6n2JPl6Bup/zXnwrntrPT7+zG4qXnoB1e8cynujszFXbri9d/ihfa5 KfYHd+ApHzpFw7515zVr7NV4cjGulOIOzF2KCQkXoqwX+BFzI3d8+MBmTwS5eHu6 MrudB3x7+++I9Hd53max93n0ZQR/zVVQsZiWVDrVTrOGSS8suXx6rEnVFjFTzjCG K4jMZAqw5ozv3g== =IYhX -----END PGP SIGNATURE----- Mon Aug 10 15:12:58 UTC 2020 I: Checking whether the package is not for us Mon Aug 10 15:12:58 UTC 2020 I: Starting 1st build on remote node profitbricks-build12-i386.debian.net. Mon Aug 10 15:12:58 UTC 2020 I: Preparing to do remote build '1' on profitbricks-build12-i386.debian.net. Mon Aug 10 15:18:38 UTC 2020 I: Deleting $TMPDIR on profitbricks-build12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Aug 10 03:13:01 -12 2020 I: pbuilder-time-stamp: 1597072381 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [mpb_1.7.0-5.dsc] I: copying [./mpb_1.7.0.orig.tar.gz] I: copying [./mpb_1.7.0-5.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Feb 1 10:32:15 2019 -12 gpgv: using RSA key 6201FBFFDBBDE07822EABB9696FCAC0D387B5847 gpgv: issuer "debian@alteholz.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./mpb_1.7.0-5.dsc dpkg-source: info: extracting mpb in mpb-1.7.0 dpkg-source: info: unpacking mpb_1.7.0.orig.tar.gz dpkg-source: info: unpacking mpb_1.7.0-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 14-mpb-mpb.1.patch dpkg-source: info: applying 15-mpb-mpb-split.1.patch dpkg-source: info: applying 16-utils-mpb-data.1.patch dpkg-source: info: applying zzz-blas-problem-on-mipsel.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/13016/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='dc1bd3fbdd6c431ea5e54b1ffea1cfa2' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='13016' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.W3XrxW4l99/pbuilderrc_uC08 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.W3XrxW4l99/b1 --logfile b1/build.log mpb_1.7.0-5.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux profitbricks-build12-i386 4.19.0-10-686-pae #1 SMP Debian 4.19.132-1 (2020-07-24) i686 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1302248 Apr 17 2019 bash -rwxr-xr-x 3 root root 38280 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 17768 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 38692 Feb 28 2019 cat -rwxr-xr-x 1 root root 75588 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 63268 Feb 28 2019 chmod -rwxr-xr-x 1 root root 75588 Feb 28 2019 chown -rwxr-xr-x 1 root root 153732 Feb 28 2019 cp -rwxr-xr-x 1 root root 132820 Jan 17 2019 dash -rwxr-xr-x 1 root root 120676 Feb 28 2019 date -rwxr-xr-x 1 root root 92040 Feb 28 2019 dd -rwxr-xr-x 1 root root 100620 Feb 28 2019 df -rwxr-xr-x 1 root root 149736 Feb 28 2019 dir -rwxr-xr-x 1 root root 79412 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 34532 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 34532 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 67700 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 30112 Apr 22 07:38 fusermount -rwxr-xr-x 1 root root 206392 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 100952 Jan 5 2019 gzip -rwxr-xr-x 1 root root 21916 Sep 26 2018 hostname -rwxr-xr-x 1 root root 79752 Feb 28 2019 ln -rwxr-xr-x 1 root root 55400 Jul 26 2018 login -rwxr-xr-x 1 root root 149736 Feb 28 2019 ls -rwxr-xr-x 1 root root 112032 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 87972 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 79748 Feb 28 2019 mknod -rwxr-xr-x 1 root root 46916 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 42348 Jan 9 2019 more -rwsr-xr-x 1 root root 50592 Jan 9 2019 mount -rwxr-xr-x 1 root root 13724 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 157832 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38660 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 46852 Feb 28 2019 readlink -rwxr-xr-x 1 root root 75588 Feb 28 2019 rm -rwxr-xr-x 1 root root 42756 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 22276 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 9 20:25 sh -> dash -rwxr-xr-x 1 root root 34532 Feb 28 2019 sleep -rwxr-xr-x 1 root root 79652 Feb 28 2019 stty -rwsr-xr-x 1 root root 71072 Jan 9 2019 su -rwxr-xr-x 1 root root 34564 Feb 28 2019 sync -rwxr-xr-x 1 root root 504024 Apr 23 2019 tar -rwxr-xr-x 1 root root 13860 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 104292 Feb 28 2019 touch -rwxr-xr-x 1 root root 34532 Feb 28 2019 true -rwxr-xr-x 1 root root 17768 Apr 22 07:38 ulockmgr_server -rwsr-xr-x 1 root root 30108 Jan 9 2019 umount -rwxr-xr-x 1 root root 34532 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 149736 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34208 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/13016/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11), liblapack-dev, libfftw3-dev (>= 3.3), libctl-dev (>= 4.1.4), gfortran, guile-2.2-dev, mpi-default-dev, libhdf5-mpi-dev, libfftw3-mpi-dev, quilt dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev (>= 3.3); however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libctl-dev (>= 4.1.4); however: Package libctl-dev is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on guile-2.2-dev; however: Package guile-2.2-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-mpi-dev; however: Package libhdf5-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-mpi-dev; however: Package libfftw3-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on quilt; however: Package quilt is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} diffstat{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-8{a} groff-base{a} guile-2.2{a} guile-2.2-dev{a} guile-2.2-libs{a} ibverbs-providers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libbsd0{a} libcroco3{a} libctl-dev{a} libctl7{a} libedit2{a} libelf1{a} libevent-2.1-6{a} libevent-core-2.1-6{a} libevent-pthreads-2.1-6{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-mpi-dev{a} libfftw3-mpi3{a} libfftw3-quad3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libgc-dev{a} libgc1c2{a} libgfortran-8-dev{a} libgfortran5{a} libglib2.0-0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgssapi-krb5-2{a} libhdf5-mpi-dev{a} libhdf5-openmpi-103{a} libhdf5-openmpi-dev{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc5{a} libibverbs-dev{a} libibverbs1{a} libicu63{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libncurses-dev{a} libncurses5-dev{a} libncurses6{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3{a} libpciaccess0{a} libpipeline1{a} libpmix2{a} libpsm-infinipath1{a} librdmacm1{a} libreadline-dev{a} libreadline7{a} libsigsegv2{a} libssl1.1{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} mpi-default-dev{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkg-config{a} po-debconf{a} quilt{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales less libarchive-cpio-perl libcoarrays-openmpi-dev libctl-doc libglib2.0-data libgpm2 libmail-sendmail-perl lynx shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 112 newly installed, 0 to remove and 0 not upgraded. Need to get 64.6 MB of archives. After unpacking 265 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2 [104 kB] Get: 2 http://deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3 [935 kB] Get: 5 http://deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://deb.debian.org/debian buster/main i386 readline-common all 7.0-5 [70.6 kB] Get: 8 http://deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 9 http://deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4+deb10u1 [242 kB] Get: 10 http://deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4+deb10u1 [124 kB] Get: 11 http://deb.debian.org/debian buster/main i386 file i386 1:5.35-4+deb10u1 [66.3 kB] Get: 12 http://deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 13 http://deb.debian.org/debian buster/main i386 libedit2 i386 3.1-20181209-1 [98.2 kB] Get: 14 http://deb.debian.org/debian buster/main i386 libkeyutils1 i386 1.6-6 [15.4 kB] Get: 15 http://deb.debian.org/debian buster/main i386 libkrb5support0 i386 1.17-3 [68.6 kB] Get: 16 http://deb.debian.org/debian buster/main i386 libk5crypto3 i386 1.17-3 [126 kB] Get: 17 http://deb.debian.org/debian buster/main i386 libssl1.1 i386 1.1.1d-0+deb10u3 [1537 kB] Get: 18 http://deb.debian.org/debian buster/main i386 libkrb5-3 i386 1.17-3 [396 kB] Get: 19 http://deb.debian.org/debian buster/main i386 libgssapi-krb5-2 i386 1.17-3 [168 kB] Get: 20 http://deb.debian.org/debian buster/main i386 openssh-client i386 1:7.9p1-10+deb10u2 [834 kB] Get: 21 http://deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 22 http://deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 23 http://deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 24 http://deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 25 http://deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 26 http://deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 27 http://deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 28 http://deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 29 http://deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 30 http://deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 31 http://deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 32 http://deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 33 http://deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 34 http://deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2+deb10u2 [1334 kB] Get: 35 http://deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6+deb10u1 [8451 kB] Get: 36 http://deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+b3 [721 kB] Get: 37 http://deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 38 http://deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2+deb10u2 [109 kB] Get: 39 http://deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 40 http://deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 41 http://deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 42 http://deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Get: 43 http://deb.debian.org/debian buster/main i386 diffstat i386 1.62-1 [34.0 kB] Get: 44 http://deb.debian.org/debian buster/main i386 libgfortran5 i386 8.3.0-6 [549 kB] Get: 45 http://deb.debian.org/debian buster/main i386 libgfortran-8-dev i386 8.3.0-6 [603 kB] Get: 46 http://deb.debian.org/debian buster/main i386 gfortran-8 i386 8.3.0-6 [9465 kB] Get: 47 http://deb.debian.org/debian buster/main i386 gfortran i386 4:8.3.0-1 [1432 B] Get: 48 http://deb.debian.org/debian buster/main i386 libgc1c2 i386 1:7.6.4-0.4 [227 kB] Get: 49 http://deb.debian.org/debian buster/main i386 libltdl7 i386 2.4.6-9 [392 kB] Get: 50 http://deb.debian.org/debian buster/main i386 libreadline7 i386 7.0-5 [156 kB] Get: 51 http://deb.debian.org/debian buster/main i386 guile-2.2-libs i386 2.2.4+1-2+deb10u1 [5022 kB] Get: 52 http://deb.debian.org/debian buster/main i386 guile-2.2 i386 2.2.4+1-2+deb10u1 [20.3 kB] Get: 53 http://deb.debian.org/debian buster/main i386 libncurses-dev i386 6.1+20181013-2+deb10u2 [360 kB] Get: 54 http://deb.debian.org/debian buster/main i386 libncurses5-dev i386 6.1+20181013-2+deb10u2 [948 B] Get: 55 http://deb.debian.org/debian buster/main i386 libreadline-dev i386 7.0-5 [146 kB] Get: 56 http://deb.debian.org/debian buster/main i386 libltdl-dev i386 2.4.6-9 [164 kB] Get: 57 http://deb.debian.org/debian buster/main i386 libgmpxx4ldbl i386 2:6.1.2+dfsg-4 [23.2 kB] Get: 58 http://deb.debian.org/debian buster/main i386 libgmp-dev i386 2:6.1.2+dfsg-4 [648 kB] Get: 59 http://deb.debian.org/debian buster/main i386 libgc-dev i386 1:7.6.4-0.4 [382 kB] Get: 60 http://deb.debian.org/debian buster/main i386 pkg-config i386 0.29-6 [64.7 kB] Get: 61 http://deb.debian.org/debian buster/main i386 guile-2.2-dev i386 2.2.4+1-2+deb10u1 [665 kB] Get: 62 http://deb.debian.org/debian buster/main i386 libnl-3-200 i386 3.4.0-1 [65.8 kB] Get: 63 http://deb.debian.org/debian buster/main i386 libnl-route-3-200 i386 3.4.0-1 [170 kB] Get: 64 http://deb.debian.org/debian buster/main i386 libibverbs1 i386 22.1-1 [53.9 kB] Get: 65 http://deb.debian.org/debian buster/main i386 ibverbs-providers i386 22.1-1 [201 kB] Get: 66 http://deb.debian.org/debian buster/main i386 libaec0 i386 1.0.2-1 [22.6 kB] Get: 67 http://deb.debian.org/debian buster/main i386 libsz2 i386 1.0.2-1 [6720 B] Get: 68 http://deb.debian.org/debian buster/main i386 libaec-dev i386 1.0.2-1 [21.4 kB] Get: 69 http://deb.debian.org/debian buster/main i386 libblas3 i386 3.8.0-2 [142 kB] Get: 70 http://deb.debian.org/debian buster/main i386 libblas-dev i386 3.8.0-2 [150 kB] Get: 71 http://deb.debian.org/debian buster/main i386 libctl7 i386 4.1.4-3 [105 kB] Get: 72 http://deb.debian.org/debian buster/main i386 libctl-dev i386 4.1.4-3 [74.4 kB] Get: 73 http://deb.debian.org/debian buster/main i386 libevent-2.1-6 i386 2.1.8-stable-4 [191 kB] Get: 74 http://deb.debian.org/debian buster/main i386 libevent-core-2.1-6 i386 2.1.8-stable-4 [137 kB] Get: 75 http://deb.debian.org/debian buster/main i386 libevent-pthreads-2.1-6 i386 2.1.8-stable-4 [48.1 kB] Get: 76 http://deb.debian.org/debian buster/main i386 libpsm-infinipath1 i386 3.3+20.604758e7-6 [178 kB] Get: 77 http://deb.debian.org/debian buster/main i386 librdmacm1 i386 22.1-1 [68.8 kB] Get: 78 http://deb.debian.org/debian buster/main i386 libfabric1 i386 1.6.2-3 [364 kB] Get: 79 http://deb.debian.org/debian buster/main i386 libfftw3-double3 i386 3.3.8-2 [640 kB] Get: 80 http://deb.debian.org/debian buster/main i386 libfftw3-long3 i386 3.3.8-2 [326 kB] Get: 81 http://deb.debian.org/debian buster/main i386 libfftw3-quad3 i386 3.3.8-2 [1762 kB] Get: 82 http://deb.debian.org/debian buster/main i386 libfftw3-single3 i386 3.3.8-2 [652 kB] Get: 83 http://deb.debian.org/debian buster/main i386 libfftw3-bin i386 3.3.8-2 [53.5 kB] Get: 84 http://deb.debian.org/debian buster/main i386 libfftw3-dev i386 3.3.8-2 [3170 kB] Get: 85 http://deb.debian.org/debian buster/main i386 libnuma1 i386 2.0.12-1 [27.7 kB] Get: 86 http://deb.debian.org/debian buster/main i386 libhwloc5 i386 1.11.12-3 [119 kB] Get: 87 http://deb.debian.org/debian buster/main i386 libpciaccess0 i386 0.14-1 [55.7 kB] Get: 88 http://deb.debian.org/debian buster/main i386 ocl-icd-libopencl1 i386 2.2.12-2 [37.2 kB] Get: 89 http://deb.debian.org/debian buster/main i386 libhwloc-plugins i386 1.11.12-3 [17.8 kB] Get: 90 http://deb.debian.org/debian buster/main i386 libpmix2 i386 3.1.2-3 [541 kB] Get: 91 http://deb.debian.org/debian buster/main i386 libopenmpi3 i386 3.1.3-11 [2236 kB] Get: 92 http://deb.debian.org/debian buster/main i386 libfftw3-mpi3 i386 3.3.8-2 [70.2 kB] Get: 93 http://deb.debian.org/debian buster/main i386 libfftw3-mpi-dev i386 3.3.8-2 [70.9 kB] Get: 94 http://deb.debian.org/debian buster/main i386 libhdf5-openmpi-103 i386 1.10.4+repack-10 [1348 kB] Get: 95 http://deb.debian.org/debian buster/main i386 zlib1g-dev i386 1:1.2.11.dfsg-1 [216 kB] Get: 96 http://deb.debian.org/debian buster/main i386 libjpeg62-turbo i386 1:1.5.2-2+b1 [142 kB] Get: 97 http://deb.debian.org/debian buster/main i386 libjpeg62-turbo-dev i386 1:1.5.2-2+b1 [226 kB] Get: 98 http://deb.debian.org/debian buster/main i386 libjpeg-dev all 1:1.5.2-2 [57.5 kB] Get: 99 http://deb.debian.org/debian buster/main i386 openmpi-common all 3.1.3-11 [165 kB] Get: 100 http://deb.debian.org/debian buster/main i386 libnl-3-dev i386 3.4.0-1 [107 kB] Get: 101 http://deb.debian.org/debian buster/main i386 libnl-route-3-dev i386 3.4.0-1 [193 kB] Get: 102 http://deb.debian.org/debian buster/main i386 libibverbs-dev i386 22.1-1 [385 kB] Get: 103 http://deb.debian.org/debian buster/main i386 libnuma-dev i386 2.0.12-1 [40.9 kB] Get: 104 http://deb.debian.org/debian buster/main i386 libhwloc-dev i386 1.11.12-3 [185 kB] Get: 105 http://deb.debian.org/debian buster/main i386 openmpi-bin i386 3.1.3-11 [200 kB] Get: 106 http://deb.debian.org/debian buster/main i386 libopenmpi-dev i386 3.1.3-11 [963 kB] Get: 107 http://deb.debian.org/debian buster/main i386 libhdf5-openmpi-dev i386 1.10.4+repack-10 [2645 kB] Get: 108 http://deb.debian.org/debian buster/main i386 mpi-default-dev i386 1.13 [5476 B] Get: 109 http://deb.debian.org/debian buster/main i386 libhdf5-mpi-dev i386 1.10.4+repack-10 [27.3 kB] Get: 110 http://deb.debian.org/debian buster/main i386 liblapack3 i386 3.8.0-2 [1974 kB] Get: 111 http://deb.debian.org/debian buster/main i386 liblapack-dev i386 3.8.0-2 [2035 kB] Get: 112 http://deb.debian.org/debian buster/main i386 quilt all 0.65-3 [318 kB] Fetched 64.6 MB in 7s (8878 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.9.1-2_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../002-libuchardet0_0.0.6-3_i386.deb ... Unpacking libuchardet0:i386 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-3_i386.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../004-libpipeline1_1.5.1-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.8.5-2_i386.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../006-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../007-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../008-libmagic-mgc_1%3a5.35-4+deb10u1_i386.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../009-libmagic1_1%3a5.35-4+deb10u1_i386.deb ... Unpacking libmagic1:i386 (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../010-file_1%3a5.35-4+deb10u1_i386.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../011-gettext-base_0.19.8.1-9_i386.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libedit2:i386. Preparing to unpack .../012-libedit2_3.1-20181209-1_i386.deb ... Unpacking libedit2:i386 (3.1-20181209-1) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../013-libkeyutils1_1.6-6_i386.deb ... Unpacking libkeyutils1:i386 (1.6-6) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../014-libkrb5support0_1.17-3_i386.deb ... Unpacking libkrb5support0:i386 (1.17-3) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../015-libk5crypto3_1.17-3_i386.deb ... Unpacking libk5crypto3:i386 (1.17-3) ... Selecting previously unselected package libssl1.1:i386. Preparing to unpack .../016-libssl1.1_1.1.1d-0+deb10u3_i386.deb ... Unpacking libssl1.1:i386 (1.1.1d-0+deb10u3) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../017-libkrb5-3_1.17-3_i386.deb ... Unpacking libkrb5-3:i386 (1.17-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../018-libgssapi-krb5-2_1.17-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.17-3) ... Selecting previously unselected package openssh-client. Preparing to unpack .../019-openssh-client_1%3a7.9p1-10+deb10u2_i386.deb ... Unpacking openssh-client (1:7.9p1-10+deb10u2) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../020-libsigsegv2_2.12-2_i386.deb ... Unpacking libsigsegv2:i386 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../021-m4_1.4.18-2_i386.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../022-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../023-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../024-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../025-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libtool. Preparing to unpack .../026-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../027-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../028-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../029-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../030-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../031-libelf1_0.176-1.1_i386.deb ... Unpacking libelf1:i386 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../032-dwz_0.12-3_i386.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:i386. Preparing to unpack .../033-libglib2.0-0_2.58.3-2+deb10u2_i386.deb ... Unpacking libglib2.0-0:i386 (2.58.3-2+deb10u2) ... Selecting previously unselected package libicu63:i386. Preparing to unpack .../034-libicu63_63.1-6+deb10u1_i386.deb ... Unpacking libicu63:i386 (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../035-libxml2_2.9.4+dfsg1-7+b3_i386.deb ... Unpacking libxml2:i386 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libcroco3:i386. Preparing to unpack .../036-libcroco3_0.6.12-3_i386.deb ... Unpacking libcroco3:i386 (0.6.12-3) ... Selecting previously unselected package libncurses6:i386. Preparing to unpack .../037-libncurses6_6.1+20181013-2+deb10u2_i386.deb ... Unpacking libncurses6:i386 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package gettext. Preparing to unpack .../038-gettext_0.19.8.1-9_i386.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../039-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../040-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../041-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../042-diffstat_1.62-1_i386.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../043-libgfortran5_8.3.0-6_i386.deb ... Unpacking libgfortran5:i386 (8.3.0-6) ... Selecting previously unselected package libgfortran-8-dev:i386. Preparing to unpack .../044-libgfortran-8-dev_8.3.0-6_i386.deb ... Unpacking libgfortran-8-dev:i386 (8.3.0-6) ... Selecting previously unselected package gfortran-8. Preparing to unpack .../045-gfortran-8_8.3.0-6_i386.deb ... Unpacking gfortran-8 (8.3.0-6) ... Selecting previously unselected package gfortran. Preparing to unpack .../046-gfortran_4%3a8.3.0-1_i386.deb ... Unpacking gfortran (4:8.3.0-1) ... Selecting previously unselected package libgc1c2:i386. Preparing to unpack .../047-libgc1c2_1%3a7.6.4-0.4_i386.deb ... Unpacking libgc1c2:i386 (1:7.6.4-0.4) ... Selecting previously unselected package libltdl7:i386. Preparing to unpack .../048-libltdl7_2.4.6-9_i386.deb ... Unpacking libltdl7:i386 (2.4.6-9) ... Selecting previously unselected package libreadline7:i386. Preparing to unpack .../049-libreadline7_7.0-5_i386.deb ... Unpacking libreadline7:i386 (7.0-5) ... Selecting previously unselected package guile-2.2-libs:i386. Preparing to unpack .../050-guile-2.2-libs_2.2.4+1-2+deb10u1_i386.deb ... Unpacking guile-2.2-libs:i386 (2.2.4+1-2+deb10u1) ... Selecting previously unselected package guile-2.2. Preparing to unpack .../051-guile-2.2_2.2.4+1-2+deb10u1_i386.deb ... Unpacking guile-2.2 (2.2.4+1-2+deb10u1) ... Selecting previously unselected package libncurses-dev:i386. Preparing to unpack .../052-libncurses-dev_6.1+20181013-2+deb10u2_i386.deb ... Unpacking libncurses-dev:i386 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package libncurses5-dev:i386. Preparing to unpack .../053-libncurses5-dev_6.1+20181013-2+deb10u2_i386.deb ... Unpacking libncurses5-dev:i386 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package libreadline-dev:i386. Preparing to unpack .../054-libreadline-dev_7.0-5_i386.deb ... Unpacking libreadline-dev:i386 (7.0-5) ... Selecting previously unselected package libltdl-dev:i386. Preparing to unpack .../055-libltdl-dev_2.4.6-9_i386.deb ... Unpacking libltdl-dev:i386 (2.4.6-9) ... Selecting previously unselected package libgmpxx4ldbl:i386. Preparing to unpack .../056-libgmpxx4ldbl_2%3a6.1.2+dfsg-4_i386.deb ... Unpacking libgmpxx4ldbl:i386 (2:6.1.2+dfsg-4) ... Selecting previously unselected package libgmp-dev:i386. Preparing to unpack .../057-libgmp-dev_2%3a6.1.2+dfsg-4_i386.deb ... Unpacking libgmp-dev:i386 (2:6.1.2+dfsg-4) ... Selecting previously unselected package libgc-dev:i386. Preparing to unpack .../058-libgc-dev_1%3a7.6.4-0.4_i386.deb ... Unpacking libgc-dev:i386 (1:7.6.4-0.4) ... Selecting previously unselected package pkg-config. Preparing to unpack .../059-pkg-config_0.29-6_i386.deb ... Unpacking pkg-config (0.29-6) ... Selecting previously unselected package guile-2.2-dev. Preparing to unpack .../060-guile-2.2-dev_2.2.4+1-2+deb10u1_i386.deb ... Unpacking guile-2.2-dev (2.2.4+1-2+deb10u1) ... Selecting previously unselected package libnl-3-200:i386. Preparing to unpack .../061-libnl-3-200_3.4.0-1_i386.deb ... Unpacking libnl-3-200:i386 (3.4.0-1) ... Selecting previously unselected package libnl-route-3-200:i386. Preparing to unpack .../062-libnl-route-3-200_3.4.0-1_i386.deb ... Unpacking libnl-route-3-200:i386 (3.4.0-1) ... Selecting previously unselected package libibverbs1:i386. Preparing to unpack .../063-libibverbs1_22.1-1_i386.deb ... Unpacking libibverbs1:i386 (22.1-1) ... Selecting previously unselected package ibverbs-providers:i386. Preparing to unpack .../064-ibverbs-providers_22.1-1_i386.deb ... Unpacking ibverbs-providers:i386 (22.1-1) ... Selecting previously unselected package libaec0:i386. Preparing to unpack .../065-libaec0_1.0.2-1_i386.deb ... Unpacking libaec0:i386 (1.0.2-1) ... Selecting previously unselected package libsz2:i386. Preparing to unpack .../066-libsz2_1.0.2-1_i386.deb ... Unpacking libsz2:i386 (1.0.2-1) ... Selecting previously unselected package libaec-dev:i386. Preparing to unpack .../067-libaec-dev_1.0.2-1_i386.deb ... Unpacking libaec-dev:i386 (1.0.2-1) ... Selecting previously unselected package libblas3:i386. Preparing to unpack .../068-libblas3_3.8.0-2_i386.deb ... Unpacking libblas3:i386 (3.8.0-2) ... Selecting previously unselected package libblas-dev:i386. Preparing to unpack .../069-libblas-dev_3.8.0-2_i386.deb ... Unpacking libblas-dev:i386 (3.8.0-2) ... Selecting previously unselected package libctl7. Preparing to unpack .../070-libctl7_4.1.4-3_i386.deb ... Unpacking libctl7 (4.1.4-3) ... Selecting previously unselected package libctl-dev. Preparing to unpack .../071-libctl-dev_4.1.4-3_i386.deb ... Unpacking libctl-dev (4.1.4-3) ... Selecting previously unselected package libevent-2.1-6:i386. Preparing to unpack .../072-libevent-2.1-6_2.1.8-stable-4_i386.deb ... Unpacking libevent-2.1-6:i386 (2.1.8-stable-4) ... Selecting previously unselected package libevent-core-2.1-6:i386. Preparing to unpack .../073-libevent-core-2.1-6_2.1.8-stable-4_i386.deb ... Unpacking libevent-core-2.1-6:i386 (2.1.8-stable-4) ... Selecting previously unselected package libevent-pthreads-2.1-6:i386. Preparing to unpack .../074-libevent-pthreads-2.1-6_2.1.8-stable-4_i386.deb ... Unpacking libevent-pthreads-2.1-6:i386 (2.1.8-stable-4) ... Selecting previously unselected package libpsm-infinipath1. Preparing to unpack .../075-libpsm-infinipath1_3.3+20.604758e7-6_i386.deb ... Unpacking libpsm-infinipath1 (3.3+20.604758e7-6) ... Selecting previously unselected package librdmacm1:i386. Preparing to unpack .../076-librdmacm1_22.1-1_i386.deb ... Unpacking librdmacm1:i386 (22.1-1) ... Selecting previously unselected package libfabric1. Preparing to unpack .../077-libfabric1_1.6.2-3_i386.deb ... Unpacking libfabric1 (1.6.2-3) ... Selecting previously unselected package libfftw3-double3:i386. Preparing to unpack .../078-libfftw3-double3_3.3.8-2_i386.deb ... Unpacking libfftw3-double3:i386 (3.3.8-2) ... Selecting previously unselected package libfftw3-long3:i386. Preparing to unpack .../079-libfftw3-long3_3.3.8-2_i386.deb ... Unpacking libfftw3-long3:i386 (3.3.8-2) ... Selecting previously unselected package libfftw3-quad3:i386. Preparing to unpack .../080-libfftw3-quad3_3.3.8-2_i386.deb ... Unpacking libfftw3-quad3:i386 (3.3.8-2) ... Selecting previously unselected package libfftw3-single3:i386. Preparing to unpack .../081-libfftw3-single3_3.3.8-2_i386.deb ... Unpacking libfftw3-single3:i386 (3.3.8-2) ... Selecting previously unselected package libfftw3-bin. Preparing to unpack .../082-libfftw3-bin_3.3.8-2_i386.deb ... Unpacking libfftw3-bin (3.3.8-2) ... Selecting previously unselected package libfftw3-dev:i386. Preparing to unpack .../083-libfftw3-dev_3.3.8-2_i386.deb ... Unpacking libfftw3-dev:i386 (3.3.8-2) ... Selecting previously unselected package libnuma1:i386. Preparing to unpack .../084-libnuma1_2.0.12-1_i386.deb ... Unpacking libnuma1:i386 (2.0.12-1) ... Selecting previously unselected package libhwloc5:i386. Preparing to unpack .../085-libhwloc5_1.11.12-3_i386.deb ... Unpacking libhwloc5:i386 (1.11.12-3) ... Selecting previously unselected package libpciaccess0:i386. Preparing to unpack .../086-libpciaccess0_0.14-1_i386.deb ... Unpacking libpciaccess0:i386 (0.14-1) ... Selecting previously unselected package ocl-icd-libopencl1:i386. Preparing to unpack .../087-ocl-icd-libopencl1_2.2.12-2_i386.deb ... Unpacking ocl-icd-libopencl1:i386 (2.2.12-2) ... Selecting previously unselected package libhwloc-plugins:i386. Preparing to unpack .../088-libhwloc-plugins_1.11.12-3_i386.deb ... Unpacking libhwloc-plugins:i386 (1.11.12-3) ... Selecting previously unselected package libpmix2:i386. Preparing to unpack .../089-libpmix2_3.1.2-3_i386.deb ... Unpacking libpmix2:i386 (3.1.2-3) ... Selecting previously unselected package libopenmpi3:i386. Preparing to unpack .../090-libopenmpi3_3.1.3-11_i386.deb ... Unpacking libopenmpi3:i386 (3.1.3-11) ... Selecting previously unselected package libfftw3-mpi3:i386. Preparing to unpack .../091-libfftw3-mpi3_3.3.8-2_i386.deb ... Unpacking libfftw3-mpi3:i386 (3.3.8-2) ... Selecting previously unselected package libfftw3-mpi-dev:i386. Preparing to unpack .../092-libfftw3-mpi-dev_3.3.8-2_i386.deb ... Unpacking libfftw3-mpi-dev:i386 (3.3.8-2) ... Selecting previously unselected package libhdf5-openmpi-103:i386. Preparing to unpack .../093-libhdf5-openmpi-103_1.10.4+repack-10_i386.deb ... Unpacking libhdf5-openmpi-103:i386 (1.10.4+repack-10) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../094-zlib1g-dev_1%3a1.2.11.dfsg-1_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.2.11.dfsg-1) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../095-libjpeg62-turbo_1%3a1.5.2-2+b1_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:1.5.2-2+b1) ... Selecting previously unselected package libjpeg62-turbo-dev:i386. Preparing to unpack .../096-libjpeg62-turbo-dev_1%3a1.5.2-2+b1_i386.deb ... Unpacking libjpeg62-turbo-dev:i386 (1:1.5.2-2+b1) ... Selecting previously unselected package libjpeg-dev. Preparing to unpack .../097-libjpeg-dev_1%3a1.5.2-2_all.deb ... Unpacking libjpeg-dev (1:1.5.2-2) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../098-openmpi-common_3.1.3-11_all.deb ... Unpacking openmpi-common (3.1.3-11) ... Selecting previously unselected package libnl-3-dev:i386. Preparing to unpack .../099-libnl-3-dev_3.4.0-1_i386.deb ... Unpacking libnl-3-dev:i386 (3.4.0-1) ... Selecting previously unselected package libnl-route-3-dev:i386. Preparing to unpack .../100-libnl-route-3-dev_3.4.0-1_i386.deb ... Unpacking libnl-route-3-dev:i386 (3.4.0-1) ... Selecting previously unselected package libibverbs-dev:i386. Preparing to unpack .../101-libibverbs-dev_22.1-1_i386.deb ... Unpacking libibverbs-dev:i386 (22.1-1) ... Selecting previously unselected package libnuma-dev:i386. Preparing to unpack .../102-libnuma-dev_2.0.12-1_i386.deb ... Unpacking libnuma-dev:i386 (2.0.12-1) ... Selecting previously unselected package libhwloc-dev:i386. Preparing to unpack .../103-libhwloc-dev_1.11.12-3_i386.deb ... Unpacking libhwloc-dev:i386 (1.11.12-3) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../104-openmpi-bin_3.1.3-11_i386.deb ... Unpacking openmpi-bin (3.1.3-11) ... Selecting previously unselected package libopenmpi-dev:i386. Preparing to unpack .../105-libopenmpi-dev_3.1.3-11_i386.deb ... Unpacking libopenmpi-dev:i386 (3.1.3-11) ... Selecting previously unselected package libhdf5-openmpi-dev. Preparing to unpack .../106-libhdf5-openmpi-dev_1.10.4+repack-10_i386.deb ... Unpacking libhdf5-openmpi-dev (1.10.4+repack-10) ... Selecting previously unselected package mpi-default-dev. Preparing to unpack .../107-mpi-default-dev_1.13_i386.deb ... Unpacking mpi-default-dev (1.13) ... Selecting previously unselected package libhdf5-mpi-dev. Preparing to unpack .../108-libhdf5-mpi-dev_1.10.4+repack-10_i386.deb ... Unpacking libhdf5-mpi-dev (1.10.4+repack-10) ... Selecting previously unselected package liblapack3:i386. Preparing to unpack .../109-liblapack3_3.8.0-2_i386.deb ... Unpacking liblapack3:i386 (3.8.0-2) ... Selecting previously unselected package liblapack-dev:i386. Preparing to unpack .../110-liblapack-dev_3.8.0-2_i386.deb ... Unpacking liblapack-dev:i386 (3.8.0-2) ... Selecting previously unselected package quilt. Preparing to unpack .../111-quilt_0.65-3_all.deb ... Unpacking quilt (0.65-3) ... Setting up libpipeline1:i386 (1.5.1-2) ... Setting up libpciaccess0:i386 (0.14-1) ... Setting up libkeyutils1:i386 (1.6-6) ... Setting up libfftw3-single3:i386 (3.3.8-2) ... Setting up libmagic-mgc (1:5.35-4+deb10u1) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libgc1c2:i386 (1:7.6.4-0.4) ... Setting up libglib2.0-0:i386 (2.58.3-2+deb10u2) ... No schema files found: doing nothing. Setting up libssl1.1:i386 (1.1.1d-0+deb10u3) ... Setting up libmagic1:i386 (1:5.35-4+deb10u1) ... Setting up libfftw3-long3:i386 (3.3.8-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4+deb10u1) ... Setting up libaec0:i386 (1.0.2-1) ... Setting up libicu63:i386 (63.1-6+deb10u1) ... Setting up libkrb5support0:i386 (1.17-3) ... Setting up autotools-dev (20180224.1) ... Setting up libgmpxx4ldbl:i386 (2:6.1.2+dfsg-4) ... Setting up libjpeg62-turbo:i386 (1:1.5.2-2+b1) ... Setting up libjpeg62-turbo-dev:i386 (1:1.5.2-2+b1) ... Setting up libncurses6:i386 (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:i386 (2.12-2) ... Setting up libfftw3-quad3:i386 (3.3.8-2) ... Setting up diffstat (1.62-1) ... Setting up autopoint (0.19.8.1-9) ... Setting up pkg-config (0.29-6) ... Setting up libk5crypto3:i386 (1.17-3) ... Setting up libltdl7:i386 (2.4.6-9) ... Setting up libfftw3-double3:i386 (3.3.8-2) ... Setting up libevent-core-2.1-6:i386 (2.1.8-stable-4) ... Setting up libgfortran5:i386 (8.3.0-6) ... Setting up libevent-2.1-6:i386 (2.1.8-stable-4) ... Setting up zlib1g-dev:i386 (1:1.2.11.dfsg-1) ... Setting up libnuma1:i386 (2.0.12-1) ... Setting up sensible-utils (0.0.12) ... Setting up ocl-icd-libopencl1:i386 (2.2.12-2) ... Setting up libuchardet0:i386 (0.0.6-3) ... Setting up libnl-3-200:i386 (3.4.0-1) ... Setting up openmpi-common (3.1.3-11) ... Setting up libkrb5-3:i386 (1.17-3) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/i386-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libgc-dev:i386 (1:7.6.4-0.4) ... Setting up libbsd0:i386 (0.9.1-2) ... Setting up libelf1:i386 (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:i386 (2.9.4+dfsg1-7+b3) ... Setting up libsz2:i386 (1.0.2-1) ... Setting up libreadline7:i386 (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libgfortran-8-dev:i386 (8.3.0-6) ... Setting up libevent-pthreads-2.1-6:i386 (2.1.8-stable-4) ... Setting up libncurses-dev:i386 (6.1+20181013-2+deb10u2) ... Setting up libgmp-dev:i386 (2:6.1.2+dfsg-4) ... Setting up libtool (2.4.6-9) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up libhwloc5:i386 (1.11.12-3) ... Setting up gfortran-8 (8.3.0-6) ... Setting up libedit2:i386 (3.1-20181209-1) ... Setting up libaec-dev:i386 (1.0.2-1) ... Setting up libjpeg-dev (1:1.5.2-2) ... Setting up m4 (1.4.18-2) ... Setting up libreadline-dev:i386 (7.0-5) ... Setting up libhwloc-plugins:i386 (1.11.12-3) ... Setting up gfortran (4:8.3.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libnuma-dev:i386 (2.0.12-1) ... Setting up libnl-route-3-200:i386 (3.4.0-1) ... Setting up libblas3:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:i386 (1.17-3) ... Setting up libcroco3:i386 (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up libnl-3-dev:i386 (3.4.0-1) ... Setting up groff-base (1.22.4-3) ... Setting up libncurses5-dev:i386 (6.1+20181013-2+deb10u2) ... Setting up libfftw3-dev:i386 (3.3.8-2) ... Setting up guile-2.2-libs:i386 (2.2.4+1-2+deb10u1) ... Setting up libblas-dev:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libibverbs1:i386 (22.1-1) ... Setting up liblapack3:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up guile-2.2 (2.2.4+1-2+deb10u1) ... update-alternatives: using /usr/lib/i386-linux-gnu/guile/2.2/bin/guile to provide /usr/bin/guile (guile) in auto mode Setting up libpmix2:i386 (3.1.2-3) ... Setting up ibverbs-providers:i386 (22.1-1) ... Setting up openssh-client (1:7.9p1-10+deb10u2) ... Setting up quilt (0.65-3) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libnl-route-3-dev:i386 (3.4.0-1) ... Setting up libltdl-dev:i386 (2.4.6-9) ... Setting up libctl7 (4.1.4-3) ... Setting up guile-2.2-dev (2.2.4+1-2+deb10u1) ... update-alternatives: using /usr/bin/guile-config-2.2 to provide /usr/bin/guile-config (guile-config) in auto mode Setting up liblapack-dev:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up libhwloc-dev:i386 (1.11.12-3) ... Setting up librdmacm1:i386 (22.1-1) ... Setting up po-debconf (1.0.21) ... Setting up libibverbs-dev:i386 (22.1-1) ... Setting up libctl-dev (4.1.4-3) ... Setting up libfabric1 (1.6.2-3) ... Setting up libopenmpi3:i386 (3.1.3-11) ... Setting up libfftw3-mpi3:i386 (3.3.8-2) ... Setting up libhdf5-openmpi-103:i386 (1.10.4+repack-10) ... Setting up openmpi-bin (3.1.3-11) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libfftw3-mpi-dev:i386 (3.3.8-2) ... Setting up libopenmpi-dev:i386 (3.1.3-11) ... update-alternatives: using /usr/lib/i386-linux-gnu/openmpi/include to provide /usr/include/i386-linux-gnu/mpi (mpi-i386-linux-gnu) in auto mode Setting up libhdf5-openmpi-dev (1.10.4+repack-10) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up mpi-default-dev (1.13) ... Setting up libhdf5-mpi-dev (1.10.4+repack-10) ... Setting up dh-autoreconf (19) ... Setting up debhelper (12.1.1) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/mpb-1.7.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package mpb dpkg-buildpackage: info: source version 1.7.0-5 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by Thorsten Alteholz dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --with autoreconf debian/rules override_dh_clean make[1]: Entering directory '/build/mpb-1.7.0' dh_clean rm -f config.log config.sub config.guess config.cache ../config.cache rm -f mpb/mpb rm -f mpb/mpb-split rm -f mpb/mpbi-split rm -f utils/mpb-data rm -f src/mpb.h rm -f src/mpbi.h rm -f src/mpb_mpi.h rm -f src/mpbi_mpi.h rm -f src/libmpb.la rm -rf debian/build-tmp make[1]: Leaving directory '/build/mpb-1.7.0' debian/rules build dh build --with autoreconf dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:25: installing './compile' configure.ac:25: installing './config.guess' configure.ac:25: installing './config.sub' configure.ac:21: installing './install-sh' configure.ac:21: installing './missing' mpb/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/mpb-1.7.0' # we build 4 binaries and need to reconfigure for each # so nothing done here make[1]: Leaving directory '/build/mpb-1.7.0' debian/rules override_dh_auto_build make[1]: Entering directory '/build/mpb-1.7.0' echo i386 i386 # there is a problem with zdotc on mipsel # so deactivate the last patch except # on mipsel quilt pop Removing patch debian/patches/zzz-blas-problem-on-mipsel.patch Restoring configure.ac Now at patch debian/patches/16-utils-mpb-data.1.patch # normal version echo "Step1: normal version start" Step1: normal version start #XXX dh_auto_configure -- --build=i686-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --build=i686-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: creating cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking whether mpicc understands -c and -o together... yes checking dependency style of mpicc... gcc3 checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mpicc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... mpicc checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for sqrt in -lm... yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for deflate in -lz... yes checking for H5Pcreate in -lhdf5... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for guile... yes checking for guile-config... guile-config checking if linking to guile works... yes checking libguile.h usability... yes checking libguile.h presence... yes checking for libguile.h... yes checking guile/gh.h usability... no checking guile/gh.h presence... no checking for guile/gh.h... no checking for scm_make_smob_type... yes checking for scm_array_get_handle... yes checking for scm_is_array... yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... gen-ctl-io checking for ctl_get_vector3 in -lctl... yes checking ctl.h usability... yes checking ctl.h presence... yes checking for ctl.h... yes checking whether libctl version is at least 4.0.0... ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... yes checking ctlgeom.h usability... yes checking ctlgeom.h presence... yes checking for ctlgeom.h... yes checking nlopt.h usability... no checking nlopt.h presence... no checking for nlopt.h... no checking for nlopt_minimize in -lnlopt... no checking for ANSI C header files... (cached) yes checking for unistd.h... (cached) yes checking getopt.h usability... yes checking getopt.h presence... yes checking for getopt.h... yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... yes checking for inline... inline checking for getopt... yes checking for strncmp... yes checking for bash... /bin/bash checking for feenableexcept... yes checking whether feenableexcept declaration is usable... yes configure: updating cache ../config.cache checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build make -j10 make[2]: Entering directory '/build/mpb-1.7.0' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /build/mpb-1.7.0/missing aclocal-1.16 -I m4 CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /build/mpb-1.7.0/missing autoconf cd . && /bin/bash /build/mpb-1.7.0/missing automake-1.16 --foreign /bin/bash ./config.status --recheck running CONFIG_SHELL=/bin/bash /bin/bash ./configure --build=i686-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode build_alias=i686-linux-gnu CC=mpicc CFLAGS=-g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC LDFLAGS=-Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi CPPFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi F77=gfortran FFLAGS=-g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong --no-create --no-recursion configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) i686-pc-linux-gnu checking host system type... (cached) i686-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /bin/sed checking for grep that handles long lines and -e... (cached) /bin/grep checking for egrep... (cached) /bin/grep -E checking for fgrep... (cached) /bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /bin/dd checking how to truncate binary pipes... (cached) /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking how to run the C preprocessor... (cached) mpicc -E checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for ANSI C header files... (cached) yes checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes checking that generated files are newer than configure... done configure: creating ./config.status /bin/bash ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: src/mpbconf.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /build/mpb-1.7.0/missing autoheader) rm -f stamp-h1 touch config.h.in cd . && /bin/bash ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make all-recursive make[3]: Entering directory '/build/mpb-1.7.0' Making all in src make[4]: Entering directory '/build/mpb-1.7.0/src' cp -f mpbconf.h mpb.h make all-recursive make[5]: Entering directory '/build/mpb-1.7.0/src' Making all in util make[6]: Entering directory '/build/mpb-1.7.0/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/build/mpb-1.7.0/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o mpi_utils.c: In function 'mpi_begin_critical_section': mpi_utils.c:186:15: warning: unused variable 'status' [-Wunused-variable] MPI_Status status; ^~~~~~ mpi_utils.c: In function 'mpi_end_critical_section': mpi_utils.c:194:35: warning: unused parameter 'tag' [-Wunused-parameter] void mpi_end_critical_section(int tag) ~~~~^~~ mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libutil.a debug_malloc.o mpi_utils.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/build/mpb-1.7.0/src/util' make[6]: Leaving directory '/build/mpb-1.7.0/src/util' Making all in matrices make[6]: Entering directory '/build/mpb-1.7.0/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c -o libmatrices_la-eigensolver.lo `test -f 'eigensolver.c' || echo './'`eigensolver.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c -o libmatrices_la-eigensolver_utils.lo `test -f 'eigensolver_utils.c' || echo './'`eigensolver_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c -o libmatrices_la-linmin.lo `test -f 'linmin.c' || echo './'`linmin.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c -o libmatrices_la-matrices.lo `test -f 'matrices.c' || echo './'`matrices.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c linmin.c -o libmatrices_la-linmin.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c matrices.c -o libmatrices_la-matrices.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c eigensolver_davidson.c -o libmatrices_la-eigensolver_davidson.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c evectmatrix.c -o libmatrices_la-evectmatrix.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo mv -f .deps/libmatrices_la-linmin.Tpo .deps/libmatrices_la-linmin.Plo mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making all in matrixio make[6]: Entering directory '/build/mpb-1.7.0/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function 'matrixio_create_sub': matrixio.c:469:17: warning: statement with no effect [-Wunused-value] IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); ^ matrixio.c:58:32: note: in definition of macro 'IF_EXCLUSIVE' # define IF_EXCLUSIVE(yes,no) yes ^~~ matrixio.c:472:17: warning: statement with no effect [-Wunused-value] IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); ^ matrixio.c:58:32: note: in definition of macro 'IF_EXCLUSIVE' # define IF_EXCLUSIVE(yes,no) yes ^~~ In file included from matrixio.c:29: matrixio.c: In function 'matrixio_open_dataset': matrixio.c:516:23: warning: comparison of integer expressions of different signedness: 'hsize_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] CHECK(dims_copy[i] == dims[i], ^~ ./../util/check.h:37:12: note: in definition of macro 'CHECK' if (!(condition)) { \ ^~~~~~~~~ matrixio.c: In function 'matrixio_create_dataset': matrixio.c:552:17: warning: statement with no effect [-Wunused-value] IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); ^ matrixio.c:58:32: note: in definition of macro 'IF_EXCLUSIVE' # define IF_EXCLUSIVE(yes,no) yes ^~~ In file included from matrixio.c:29: matrixio.c: In function 'matrixio_read_real_data': matrixio.c:837:28: warning: comparison of integer expressions of different signedness: 'hsize_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] CHECK(dims_copy[i] == dims[i], ^~ ./../util/check.h:37:12: note: in definition of macro 'CHECK' if (!(condition)) { \ ^~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making all in maxwell make[6]: Entering directory '/build/mpb-1.7.0/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o maxwell_eps.c: In function 'set_maxwell_dielectric': maxwell_eps.c:395:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k; ^ maxwell_eps.c:395:13: warning: unused variable 'j' [-Wunused-variable] int i, j, k; ^ maxwell_eps.c:395:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k; ^ maxwell_op.c: In function 'maxwell_compute_fft': At top level: maxwell_eps.c:181:12: warning: 'sym_matrix_eq' defined but not used [-Wunused-function] static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) ^~~~~~~~~~~~~ maxwell_op.c:187:14: warning: variable 'np' set but not used [-Wunused-but-set-variable] ptrdiff_t np[3]; ^~ maxwell_op.c:177:12: warning: unused variable 'rarray_out' [-Wunused-variable] real *rarray_out = (real *) array_out; ^~~~~~~~~~ maxwell_op.c:175:12: warning: unused variable 'rarray_in' [-Wunused-variable] real *rarray_in = (real *) array_in; ^~~~~~~~~ maxwell_op.c: In function 'maxwell_vectorfield_otherhalf': maxwell_op.c:637:50: warning: unused parameter 'd' [-Wunused-parameter] void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, ~~~~~~~~~~~~~~^ maxwell_op.c:637:69: warning: unused parameter 'field' [-Wunused-parameter] void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:638:13: warning: unused parameter 'phasex' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c:638:26: warning: unused parameter 'phasey' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c:638:39: warning: unused parameter 'phasez' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c: In function 'maxwell_cscalarfield_otherhalf': maxwell_op.c:841:51: warning: unused parameter 'd' [-Wunused-parameter] void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, ~~~~~~~~~~~~~~^ maxwell_op.c:841:70: warning: unused parameter 'field' [-Wunused-parameter] void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:842:14: warning: unused parameter 'phasex' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c:842:27: warning: unused parameter 'phasey' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c:842:40: warning: unused parameter 'phasez' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c: In function 'maxwell_scalarfield_otherhalf': maxwell_op.c:1042:50: warning: unused parameter 'd' [-Wunused-parameter] void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) ~~~~~~~~~~~~~~^ maxwell_op.c:1042:59: warning: unused parameter 'field' [-Wunused-parameter] void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) ~~~~~~^~~~~ mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[6]: Entering directory '/build/mpb-1.7.0/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 2:0:1 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmpb.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpb.lax/libutil.a && ar x "/build/mpb-1.7.0/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpb.lax/libmatrices.a && ar x "/build/mpb-1.7.0/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpb.lax/libmaxwell.a && ar x "/build/mpb-1.7.0/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cru .libs/libmpb.a .libs/libmpb.lax/libutil.a/debug_malloc.o .libs/libmpb.lax/libutil.a/mpi_utils.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmpb.a libtool: link: rm -fr .libs/libmpb.lax libtool: link: ( cd ".libs" && rm -f "libmpb.la" && ln -s "../libmpb.la" "libmpb.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src' make[5]: Leaving directory '/build/mpb-1.7.0/src' make[4]: Leaving directory '/build/mpb-1.7.0/src' Making all in tests make[4]: Entering directory '/build/mpb-1.7.0/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c eigs_test.c: In function 'Aop': eigs_test.c:293:51: warning: unused parameter 'data' [-Wunused-parameter] void Aop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:294:7: warning: unused parameter 'is_current_eigenvector' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:43: warning: unused parameter 'Work' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~~~~~~~~~^~~~ eigs_test.c: In function 'Bop': eigs_test.c:303:51: warning: unused parameter 'data' [-Wunused-parameter] void Bop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:304:7: warning: unused parameter 'is_current_eigenvector' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:43: warning: unused parameter 'Work' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~~~~~~~~~^~~~ eigs_test.c: In function 'Ainvop': eigs_test.c:313:54: warning: unused parameter 'data' [-Wunused-parameter] void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:314:18: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ eigs_test.c:314:27: warning: unused parameter 'eigenvals' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~^~~~~~~~~ eigs_test.c:314:47: warning: unused parameter 'YtY' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~^~~ eigs_test.c: In function 'Cop_old': eigs_test.c:324:55: warning: unused parameter 'data' [-Wunused-parameter] void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:325:15: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ eigs_test.c:325:24: warning: unused parameter 'eigenvals' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~^~~~~~~~~ eigs_test.c: In function 'Cop': eigs_test.c:349:51: warning: unused parameter 'data' [-Wunused-parameter] void Cop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:350:16: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpb.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpb.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpb.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpb.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpb.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/mpb-1.7.0/tests' Making all in mpb make[4]: Entering directory '/build/mpb-1.7.0/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl /usr/bin/perl -pe 's/epsilon/mu/g;s/eps_inv/mu_inv/g' epsilon.c > mu.c ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/build/mpb-1.7.0/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-medium.o -MD -MP -MF .deps/mpb-medium.Tpo -c -o mpb-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-epsilon_file.o -MD -MP -MF .deps/mpb-epsilon_file.Tpo -c -o mpb-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-field-smob.o -MD -MP -MF .deps/mpb-field-smob.Tpo -c -o mpb-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-fields.o -MD -MP -MF .deps/mpb-fields.Tpo -c -o mpb-fields.o `test -f 'fields.c' || echo './'`fields.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-material_grid.o -MD -MP -MF .deps/mpb-material_grid.Tpo -c -o mpb-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-material_grid_opt.o -MD -MP -MF .deps/mpb-material_grid_opt.Tpo -c -o mpb-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-matrix-smob.o -MD -MP -MF .deps/mpb-matrix-smob.Tpo -c -o mpb-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-mpb.o -MD -MP -MF .deps/mpb-mpb.Tpo -c -o mpb-mpb.o `test -f 'mpb.c' || echo './'`mpb.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-main.o -MD -MP -MF .deps/mpb-main.Tpo -c -o mpb-main.o `test -f 'main.c' || echo './'`main.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-geom.o -MD -MP -MF .deps/mpb-geom.Tpo -c -o mpb-geom.o `test -f 'geom.c' || echo './'`geom.c In file included from medium.c:75: epsilon.c: In function 'get_epsilon': epsilon.c:434:51: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ epsilon.c:434:47: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ epsilon.c:434:43: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ epsilon.c:434:26: warning: variable 'last_dim_stored' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~~~ epsilon.c:434:16: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~ In file included from medium.c:76: mu.c: In function 'get_mu': mu.c:434:51: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ mu.c:434:47: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ mu.c:434:43: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ mu.c:434:26: warning: variable 'last_dim_stored' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~~~ mu.c:434:16: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~ main.c: In function 'make_name': main.c:140:8: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if (ndir > 5 && !strcmp(".libs", dir+ndir-5)) ^~ main.c:142:4: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' strcpy(base0, for_base); base = basename(base0); ^~~~~~ In file included from ctl-io.h:7, from main.c:37: main.c: In function 'main_entry': main.c:202:32: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] gh_new_procedure ("subplex", (SCM (*)(void)) subplex_scm, 7, 0, 0); ^ main.c:212:7: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] (SCM (*)(void)) adaptive_integration_scm, 6, 0, 0); ^ main.c:216:7: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] (SCM (*)(void)) cadaptive_integration_scm, 6, 0, 0); ^ geom.c: In function 'overlap_integrand': geom.c:1246:13: warning: unused variable 's' [-Wunused-variable] double s[2]; ^ In file included from mpb.c:35: mpb.c: In function 'ctl_start_hook': ../src/util/mpiglue.h:42:29: warning: statement with no effect [-Wunused-value] #define MPI_Init(argc,argv) 0 ^ mpb.c:93:6: note: in expansion of macro 'MPI_Init' MPI_Init(argc, argv); ^~~~~~~~ mpb.c:91:26: warning: unused parameter 'argc' [-Wunused-parameter] void ctl_start_hook(int *argc, char ***argv) ~~~~~^~~~ mpb.c:91:40: warning: unused parameter 'argv' [-Wunused-parameter] void ctl_start_hook(int *argc, char ***argv) ~~~~~~~~^~~~ In file included from mpb.c:35: mpb.c: In function 'ctl_stop_hook': ../src/util/mpiglue.h:43:24: warning: statement with no effect [-Wunused-value] #define MPI_Finalize() 0 ^ mpb.c:137:6: note: in expansion of macro 'MPI_Finalize' MPI_Finalize(); ^~~~~~~~~~~~ fields.c: In function 'compute_field_energy_internal': fields.c:227:50: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ fields.c:227:46: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ fields.c:227:42: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ fields.c:227:25: warning: variable 'last_dim_stored' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~~~ fields.c:227:15: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~ fields.c: In function 'get_val': fields.c:551:11: warning: unused parameter 'nx' [-Wunused-parameter] int nx, int ny, int nz, int last_dim_size, ~~~~^~ fields.c:551:35: warning: unused parameter 'last_dim_size' [-Wunused-parameter] int nx, int ny, int nz, int last_dim_size, ~~~~^~~~~~~~~~~~~ material_grid_opt.c: In function 'material_grids_min_tetm_gap': material_grid_opt.c:90:43: warning: unused parameter 'func_tol' [-Wunused-parameter] number func_tol, number eps_tol, ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter 'maxeval' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter 'maxtime' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~^~~~~~~ fields.c: In function 'compute_energy_in_dielectric': fields.c:851:51: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ fields.c:851:47: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ fields.c:851:43: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ fields.c:851:26: warning: variable 'last_dim_stored' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~~~ fields.c:851:16: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~ fields.c: In function 'output_scalarfield': fields.c:924:15: warning: unused parameter 'last_dim_index' [-Wunused-parameter] int last_dim_index, ~~~~^~~~~~~~~~~~~~ fields.c:925:15: warning: unused parameter 'last_dim_start' [-Wunused-parameter] int last_dim_start, int last_dim_size, ~~~~^~~~~~~~~~~~~~ fields.c:925:35: warning: unused parameter 'last_dim_size' [-Wunused-parameter] int last_dim_start, int last_dim_size, ~~~~^~~~~~~~~~~~~ fields.c:926:15: warning: unused parameter 'first_dim_start' [-Wunused-parameter] int first_dim_start, int first_dim_size, ~~~~^~~~~~~~~~~~~~~ fields.c:926:36: warning: unused parameter 'first_dim_size' [-Wunused-parameter] int first_dim_start, int first_dim_size, ~~~~^~~~~~~~~~~~~~ fields.c:927:15: warning: unused parameter 'write_start0_special' [-Wunused-parameter] int write_start0_special) ~~~~^~~~~~~~~~~~~~~~~~~~ material_grid_opt.c: In function 'material_grids_maxmin_gap': material_grid_opt.c:258:13: warning: unused parameter 'func_tol' [-Wunused-parameter] number func_tol, number eps_tol, ~~~~~~~^~~~~~~~ material_grid_opt.c:259:14: warning: unused parameter 'maxeval' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~~^~~~~~~ material_grid_opt.c:259:30: warning: unused parameter 'maxtime' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~^~~~~~~ geom.c: In function 'point_in_or_on_prism': geom.c:2250:10: warning: unused variable 'height' [-Wunused-variable] double height = prsm->height; ^~~~~~ geom.c: In function 'dcmp': geom.c:2275:15: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] { double d1=*((double *)pd1), d2=*((double *)pd2); ^ geom.c:2275:36: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] { double d1=*((double *)pd1), d2=*((double *)pd2); ^ geom.c: In function 'triangle_normal': geom.c:2551:10: warning: unused variable 'nvnorm' [-Wunused-variable] double nvnorm=vector3_norm(nv); ^~~~~~ field-smob.c: In function 'integrate_fieldL': field-smob.c:407:54: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~~ field-smob.c:407:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ field-smob.c:407:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ field-smob.c:407:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ fields.c: In function 'output_field_to_file': fields.c:1229:10: warning: implicit declaration of function 'get_epsilon_tensor'; did you mean 'get_epsilon_aux'? [-Wimplicit-function-declaration] get_epsilon_tensor(c1,c2, 0, inv); ^~~~~~~~~~~~~~~~~~ get_epsilon_aux fields.c: In function 'compute_energy_in_object_list': fields.c:1287:54: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~~ fields.c:1287:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ fields.c:1287:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ fields.c:1287:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ fields.c:1287:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c:1287:13: warning: unused variable 'j' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ geom.c: In function 'point_in_fixed_pobjectp': geom.c:299:5: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:322:3: note: here case GEOM PRISM: ^~~~ fields.c: In function 'compute_field_integral': fields.c:1356:54: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~~ fields.c:1356:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ fields.c:1356:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ fields.c:1356:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ geom.c: In function 'normal_to_fixed_object': geom.c:454:5: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:483:3: note: here case GEOM PRISM: ^~~~ fields.c:1356:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c:1356:13: warning: unused variable 'j' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c:1356:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ material_grid.c: In function 'material_grids_addgradient': material_grid.c:390:54: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~~ material_grid.c:390:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ material_grid.c:390:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ material_grid.c:390:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ material_grid.c:390:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ material_grid.c:390:13: warning: unused variable 'j' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ material_grid.c:390:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ At top level: field-smob.c:395:17: warning: 'cvector3_conj' defined but not used [-Wunused-function] static cvector3 cvector3_conj(cvector3 c) ^~~~~~~~~~~~~ geom.c: In function 'intersect_line_with_object': geom.c:841:3: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:912:3: note: here default: ^~~~~~~ material_grid.c: In function 'print_material_grids_deps_du_numeric': material_grid.c:634:14: warning: unused variable 'foo' [-Wunused-variable] double *foo; ^~~ In file included from material_grid.c:25: material_grid.c: In function 'synchronize_material_grid': ../src/util/mpiglue.h:58:40: warning: statement with no effect [-Wunused-value] #define MPI_Bcast(b, n, t, root, comm) 0 ^ material_grid.c:693:6: note: in expansion of macro 'MPI_Bcast' MPI_Bcast(grid, n, MPI_DOUBLE, 0, mpb_comm); ^~~~~~~~~ material_grid.c:691:10: warning: unused variable 'n' [-Wunused-variable] int n = ((int) g->size.x) * ((int) g->size.y) * ((int) g->size.z); ^ material_grid.c:690:14: warning: variable 'grid' set but not used [-Wunused-but-set-variable] double *grid; ^~~~ material_grid.c: In function 'match_eps_func': material_grid.c:816:54: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~~ material_grid.c:816:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ material_grid.c:816:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ material_grid.c:816:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ At top level: material_grid.c:807:15: warning: 'match_eps_func' defined but not used [-Wunused-function] static double match_eps_func(int n, const double *u, double *grad, void *data) ^~~~~~~~~~~~~~ mu.c: In function 'mean_mu_func': mu.c:271:13: warning: 'shiftby1' may be used uninitialized in this function [-Wmaybe-uninitialized] shiftby2 = shiftby1; ~~~~~~~~~^~~~~~~~~~ mv -f .deps/mpb-main.Tpo .deps/mpb-main.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-ctl-io.o -MD -MP -MF .deps/mpb-ctl-io.Tpo -c -o mpb-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c mv -f .deps/mpb-epsilon_file.Tpo .deps/mpb-epsilon_file.Po sed "s%\./mpb%"/usr/bin/"mpb%g" \ mpb-split-preinstall > mpb-split chmod u+x mpb-split In file included from medium.c:75: epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:13: warning: 'shiftby1' may be used uninitialized in this function [-Wmaybe-uninitialized] shiftby2 = shiftby1; ~~~~~~~~~^~~~~~~~~~ mv -f .deps/mpb-material_grid_opt.Tpo .deps/mpb-material_grid_opt.Po ctl-io.c: In function 'block_equal': ctl-io.c:513:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'cylinder_equal': ctl-io.c:553:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'geometric_object_equal': ctl-io.c:590:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'material_type_equal': ctl-io.c:650:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'lattice_destroy': ctl-io.c:656:30: warning: unused parameter 'o' [-Wunused-parameter] void lattice_destroy(lattice o) ~~~~~~~~^ ctl-io.c: In function 'ellipsoid_destroy': ctl-io.c:660:34: warning: unused parameter 'o' [-Wunused-parameter] void ellipsoid_destroy(ellipsoid o) ~~~~~~~~~~^ ctl-io.c: In function 'sphere_destroy': ctl-io.c:689:28: warning: unused parameter 'o' [-Wunused-parameter] void sphere_destroy(sphere o) ~~~~~~~^ ctl-io.c: In function 'wedge_destroy': ctl-io.c:693:26: warning: unused parameter 'o' [-Wunused-parameter] void wedge_destroy(wedge o) ~~~~~~^ ctl-io.c: In function 'cone_destroy': ctl-io.c:697:24: warning: unused parameter 'o' [-Wunused-parameter] void cone_destroy(cone o) ~~~~~^ ctl-io.c: In function 'material_grid_destroy': ctl-io.c:751:42: warning: unused parameter 'o' [-Wunused-parameter] void material_grid_destroy(material_grid o) ~~~~~~~~~~~~~~^ ctl-io.c: In function 'material_function_destroy': ctl-io.c:755:50: warning: unused parameter 'o' [-Wunused-parameter] void material_function_destroy(material_function o) ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function 'medium_anisotropic_destroy': ctl-io.c:759:52: warning: unused parameter 'o' [-Wunused-parameter] void medium_anisotropic_destroy(medium_anisotropic o) ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function 'medium_destroy': ctl-io.c:763:28: warning: unused parameter 'o' [-Wunused-parameter] void medium_destroy(medium o) ~~~~~~~^ mv -f .deps/mpb-matrix-smob.Tpo .deps/mpb-matrix-smob.Po mv -f .deps/mpb-field-smob.Tpo .deps/mpb-field-smob.Po mv -f .deps/mpb-mpb.Tpo .deps/mpb-mpb.Po mv -f .deps/mpb-medium.Tpo .deps/mpb-medium.Po mv -f .deps/mpb-material_grid.Tpo .deps/mpb-material_grid.Po mv -f .deps/mpb-fields.Tpo .deps/mpb-fields.Po mv -f .deps/mpb-ctl-io.Tpo .deps/mpb-ctl-io.Po mv -f .deps/mpb-geom.Tpo .deps/mpb-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpb mpb-medium.o mpb-epsilon_file.o mpb-field-smob.o mpb-fields.o mpb-material_grid.o mpb-material_grid_opt.o mpb-matrix-smob.o mpb-mpb.o mpb-main.o mpb-geom.o mpb-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpb.la -lctl -lguile-2.2 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpb mpb-medium.o mpb-epsilon_file.o mpb-field-smob.o mpb-fields.o mpb-material_grid.o mpb-material_grid_opt.o mpb-matrix-smob.o mpb-mpb.o mpb-main.o mpb-geom.o mpb-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpb.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lctl -lguile-2.2 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[5]: Leaving directory '/build/mpb-1.7.0/mpb' make[4]: Leaving directory '/build/mpb-1.7.0/mpb' Making all in examples make[4]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/mpb-1.7.0/examples' Making all in utils make[4]: Entering directory '/build/mpb-1.7.0/utils' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/matrixio -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_data-mpb-data.o -MD -MP -MF .deps/mpb_data-mpb-data.Tpo -c -o mpb_data-mpb-data.o `test -f 'mpb-data.c' || echo './'`mpb-data.c mv -f .deps/mpb_data-mpb-data.Tpo .deps/mpb_data-mpb-data.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpb-data mpb_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/libmpb.la -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpb-data mpb_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpb.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/mpb-1.7.0/utils' make[4]: Entering directory '/build/mpb-1.7.0' make[4]: Leaving directory '/build/mpb-1.7.0' make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' make install prefix=/build/mpb-1.7.0/debian/build-tmp/mpb/usr make[2]: Entering directory '/build/mpb-1.7.0' Making install in src make[3]: Entering directory '/build/mpb-1.7.0/src' make install-recursive make[4]: Entering directory '/build/mpb-1.7.0/src' Making install in util make[5]: Entering directory '/build/mpb-1.7.0/src/util' make install-am make[6]: Entering directory '/build/mpb-1.7.0/src/util' make[7]: Entering directory '/build/mpb-1.7.0/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/mpb-1.7.0/src/util' make[6]: Leaving directory '/build/mpb-1.7.0/src/util' make[5]: Leaving directory '/build/mpb-1.7.0/src/util' Making install in matrices make[5]: Entering directory '/build/mpb-1.7.0/src/matrices' make[6]: Entering directory '/build/mpb-1.7.0/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/matrices' make[5]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making install in matrixio make[5]: Entering directory '/build/mpb-1.7.0/src/matrixio' make[6]: Entering directory '/build/mpb-1.7.0/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/matrixio' make[5]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making install in maxwell make[5]: Entering directory '/build/mpb-1.7.0/src/maxwell' make[6]: Entering directory '/build/mpb-1.7.0/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[5]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[5]: Entering directory '/build/mpb-1.7.0/src' make[6]: Entering directory '/build/mpb-1.7.0/src' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpb.la '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpb.lai /build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib/libmpb.la libtool: install: /usr/bin/install -c .libs/libmpb.a /build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib/libmpb.a libtool: install: chmod 644 /build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib/libmpb.a libtool: install: ranlib /build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib/libmpb.a libtool: warning: remember to run 'libtool --finish /usr/lib' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/include' /usr/bin/install -c -m 644 mpb.h '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/include' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/include/mpb' make[6]: Leaving directory '/build/mpb-1.7.0/src' make[5]: Leaving directory '/build/mpb-1.7.0/src' make[4]: Leaving directory '/build/mpb-1.7.0/src' make[3]: Leaving directory '/build/mpb-1.7.0/src' Making install in tests make[3]: Entering directory '/build/mpb-1.7.0/tests' make[4]: Entering directory '/build/mpb-1.7.0/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0/tests' make[3]: Leaving directory '/build/mpb-1.7.0/tests' Making install in mpb make[3]: Entering directory '/build/mpb-1.7.0/mpb' make install-am make[4]: Entering directory '/build/mpb-1.7.0/mpb' make[5]: Entering directory '/build/mpb-1.7.0/mpb' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpb '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpb /build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin/mpb /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' /usr/bin/install -c mpb-split '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/man/man1' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/mpb' make[5]: Leaving directory '/build/mpb-1.7.0/mpb' make[4]: Leaving directory '/build/mpb-1.7.0/mpb' make[3]: Leaving directory '/build/mpb-1.7.0/mpb' Making install in examples make[3]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0/examples' make[3]: Leaving directory '/build/mpb-1.7.0/examples' Making install in utils make[3]: Entering directory '/build/mpb-1.7.0/utils' make[4]: Entering directory '/build/mpb-1.7.0/utils' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpb-data '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpb-data /build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin/mpb-data /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/man/man1' make[4]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Entering directory '/build/mpb-1.7.0' make[4]: Entering directory '/build/mpb-1.7.0' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0' make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' make clean make[2]: Entering directory '/build/mpb-1.7.0' Making clean in src make[3]: Entering directory '/build/mpb-1.7.0/src' Making clean in util make[4]: Entering directory '/build/mpb-1.7.0/src/util' rm -rf .libs _libs test -z "libutil.la" || rm -f libutil.la rm -f ./so_locations rm -f sphere_quad rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/util' Making clean in matrices make[4]: Entering directory '/build/mpb-1.7.0/src/matrices' rm -rf .libs _libs test -z "libmatrices.la" || rm -f libmatrices.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making clean in matrixio make[4]: Entering directory '/build/mpb-1.7.0/src/matrixio' rm -rf .libs _libs test -z "libmatrixio.a" || rm -f libmatrixio.a rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making clean in maxwell make[4]: Entering directory '/build/mpb-1.7.0/src/maxwell' rm -rf .libs _libs test -z "libmaxwell.la" || rm -f libmaxwell.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[4]: Entering directory '/build/mpb-1.7.0/src' test -z "libmpb.la" || rm -f libmpb.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src' make[3]: Leaving directory '/build/mpb-1.7.0/src' Making clean in tests make[3]: Entering directory '/build/mpb-1.7.0/tests' rm -rf .libs _libs rm -f blastest.out maxwell_test.out maxwell_test_2.out rm -f malloctest blastest eigs_test maxwell_test normal_vectors rm -f *.o rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/tests' Making clean in mpb make[3]: Entering directory '/build/mpb-1.7.0/mpb' rm -f mpb rm -rf .libs _libs rm -f ctl-io.* main.* geom.* rm -f *.o rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/mpb' Making clean in examples make[3]: Entering directory '/build/mpb-1.7.0/examples' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/examples' Making clean in utils make[3]: Entering directory '/build/mpb-1.7.0/utils' rm -f mpb-data rm -rf .libs _libs rm -f *.o rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Entering directory '/build/mpb-1.7.0' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' echo "Step1: normal version end" Step1: normal version end # version with inverse symmetry #XXX dh_auto_configure -- --with-inv-symmetry --build=i686-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --with-inv-symmetry --build=i686-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) i686-pc-linux-gnu checking host system type... (cached) i686-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /bin/sed checking for grep that handles long lines and -e... (cached) /bin/grep checking for egrep... (cached) /bin/grep -E checking for fgrep... (cached) /bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /bin/dd checking how to truncate binary pipes... (cached) /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking how to run the C preprocessor... (cached) mpicc -E checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 *********************** INVERSION SYM. *********************** checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for ANSI C header files... (cached) yes checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands echo "Step2: inverse version start" Step2: inverse version start dh_auto_build make -j10 make[2]: Entering directory '/build/mpb-1.7.0' make all-recursive make[3]: Entering directory '/build/mpb-1.7.0' Making all in src make[4]: Entering directory '/build/mpb-1.7.0/src' cp -f mpbconf.h mpbi.h make all-recursive make[5]: Entering directory '/build/mpb-1.7.0/src' Making all in util make[6]: Entering directory '/build/mpb-1.7.0/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/build/mpb-1.7.0/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o mpi_utils.c: In function 'mpi_begin_critical_section': mpi_utils.c:186:15: warning: unused variable 'status' [-Wunused-variable] MPI_Status status; ^~~~~~ mpi_utils.c: In function 'mpi_end_critical_section': mpi_utils.c:194:35: warning: unused parameter 'tag' [-Wunused-parameter] void mpi_end_critical_section(int tag) ~~~~^~~ mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libutil.a debug_malloc.o mpi_utils.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/build/mpb-1.7.0/src/util' make[6]: Leaving directory '/build/mpb-1.7.0/src/util' Making all in matrices make[6]: Entering directory '/build/mpb-1.7.0/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c -o libmatrices_la-eigensolver.lo `test -f 'eigensolver.c' || echo './'`eigensolver.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c -o libmatrices_la-eigensolver_utils.lo `test -f 'eigensolver_utils.c' || echo './'`eigensolver_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c -o libmatrices_la-linmin.lo `test -f 'linmin.c' || echo './'`linmin.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c -o libmatrices_la-matrices.lo `test -f 'matrices.c' || echo './'`matrices.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c matrices.c -o libmatrices_la-matrices.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c linmin.c -o libmatrices_la-linmin.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c evectmatrix.c -o libmatrices_la-evectmatrix.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c eigensolver_davidson.c -o libmatrices_la-eigensolver_davidson.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-linmin.Tpo .deps/libmatrices_la-linmin.Plo mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making all in matrixio make[6]: Entering directory '/build/mpb-1.7.0/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function 'matrixio_create_sub': matrixio.c:469:17: warning: statement with no effect [-Wunused-value] IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); ^ matrixio.c:58:32: note: in definition of macro 'IF_EXCLUSIVE' # define IF_EXCLUSIVE(yes,no) yes ^~~ matrixio.c:472:17: warning: statement with no effect [-Wunused-value] IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); ^ matrixio.c:58:32: note: in definition of macro 'IF_EXCLUSIVE' # define IF_EXCLUSIVE(yes,no) yes ^~~ In file included from matrixio.c:29: matrixio.c: In function 'matrixio_open_dataset': matrixio.c:516:23: warning: comparison of integer expressions of different signedness: 'hsize_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] CHECK(dims_copy[i] == dims[i], ^~ ./../util/check.h:37:12: note: in definition of macro 'CHECK' if (!(condition)) { \ ^~~~~~~~~ matrixio.c: In function 'matrixio_create_dataset': matrixio.c:552:17: warning: statement with no effect [-Wunused-value] IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); ^ matrixio.c:58:32: note: in definition of macro 'IF_EXCLUSIVE' # define IF_EXCLUSIVE(yes,no) yes ^~~ In file included from matrixio.c:29: matrixio.c: In function 'matrixio_read_real_data': matrixio.c:837:28: warning: comparison of integer expressions of different signedness: 'hsize_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] CHECK(dims_copy[i] == dims[i], ^~ ./../util/check.h:37:12: note: in definition of macro 'CHECK' if (!(condition)) { \ ^~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making all in maxwell make[6]: Entering directory '/build/mpb-1.7.0/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o In file included from maxwell_eps.c:29: maxwell_eps.c: In function 'set_maxwell_dielectric': xyz_loop.h:39:15: warning: unused variable 'n1' [-Wunused-variable] int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1_, i2_, i1, i2, i3; \ ^~ maxwell_eps.c:421:6: note: in expansion of macro 'LOOP_XYZ' LOOP_XYZ(md) { ^~~~~~~~ maxwell_eps.c:404:27: warning: unused variable 'rank' [-Wunused-variable] int n_other, n_last, rank; ^~~~ maxwell_eps.c:404:19: warning: unused variable 'n_last' [-Wunused-variable] int n_other, n_last, rank; ^~~~~~ maxwell_eps.c:404:10: warning: unused variable 'n_other' [-Wunused-variable] int n_other, n_last, rank; ^~~~~~~ maxwell_eps.c:395:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k; ^ maxwell_eps.c:395:13: warning: unused variable 'j' [-Wunused-variable] int i, j, k; ^ maxwell_eps.c:395:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k; ^ maxwell_op.c: In function 'project_c2t': maxwell_op.c:51:54: warning: unused variable 'az_i' [-Wunused-variable] real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); ^~~~ maxwell_op.c:51:32: warning: unused variable 'ay_i' [-Wunused-variable] real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); ^~~~ maxwell_op.c:51:10: warning: unused variable 'ax_i' [-Wunused-variable] real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); ^~~~ At top level: maxwell_eps.c:181:12: warning: 'sym_matrix_eq' defined but not used [-Wunused-function] static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) ^~~~~~~~~~~~~ maxwell_op.c: In function 'maxwell_compute_fft': maxwell_op.c:187:14: warning: variable 'np' set but not used [-Wunused-but-set-variable] ptrdiff_t np[3]; ^~ mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[6]: Entering directory '/build/mpb-1.7.0/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 2:0:1 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmpbi.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpbi.lax/libutil.a && ar x "/build/mpb-1.7.0/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpbi.lax/libmatrices.a && ar x "/build/mpb-1.7.0/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpbi.lax/libmaxwell.a && ar x "/build/mpb-1.7.0/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cru .libs/libmpbi.a .libs/libmpbi.lax/libutil.a/debug_malloc.o .libs/libmpbi.lax/libutil.a/mpi_utils.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmpbi.a libtool: link: rm -fr .libs/libmpbi.lax libtool: link: ( cd ".libs" && rm -f "libmpbi.la" && ln -s "../libmpbi.la" "libmpbi.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src' make[5]: Leaving directory '/build/mpb-1.7.0/src' make[4]: Leaving directory '/build/mpb-1.7.0/src' Making all in tests make[4]: Entering directory '/build/mpb-1.7.0/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c eigs_test.c: In function 'Aop': eigs_test.c:293:51: warning: unused parameter 'data' [-Wunused-parameter] void Aop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:294:7: warning: unused parameter 'is_current_eigenvector' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:43: warning: unused parameter 'Work' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~~~~~~~~~^~~~ eigs_test.c: In function 'Bop': eigs_test.c:303:51: warning: unused parameter 'data' [-Wunused-parameter] void Bop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:304:7: warning: unused parameter 'is_current_eigenvector' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:43: warning: unused parameter 'Work' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~~~~~~~~~^~~~ eigs_test.c: In function 'Ainvop': eigs_test.c:313:54: warning: unused parameter 'data' [-Wunused-parameter] void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:314:18: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ eigs_test.c:314:27: warning: unused parameter 'eigenvals' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~^~~~~~~~~ eigs_test.c:314:47: warning: unused parameter 'YtY' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~^~~ eigs_test.c: In function 'Cop_old': eigs_test.c:324:55: warning: unused parameter 'data' [-Wunused-parameter] void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:325:15: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ eigs_test.c:325:24: warning: unused parameter 'eigenvals' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~^~~~~~~~~ eigs_test.c: In function 'Cop': eigs_test.c:349:51: warning: unused parameter 'data' [-Wunused-parameter] void Cop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:350:16: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpbi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/mpb-1.7.0/tests' Making all in mpb make[4]: Entering directory '/build/mpb-1.7.0/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/build/mpb-1.7.0/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-medium.o -MD -MP -MF .deps/mpbi-medium.Tpo -c -o mpbi-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-epsilon_file.o -MD -MP -MF .deps/mpbi-epsilon_file.Tpo -c -o mpbi-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-field-smob.o -MD -MP -MF .deps/mpbi-field-smob.Tpo -c -o mpbi-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-fields.o -MD -MP -MF .deps/mpbi-fields.Tpo -c -o mpbi-fields.o `test -f 'fields.c' || echo './'`fields.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-material_grid.o -MD -MP -MF .deps/mpbi-material_grid.Tpo -c -o mpbi-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-material_grid_opt.o -MD -MP -MF .deps/mpbi-material_grid_opt.Tpo -c -o mpbi-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-matrix-smob.o -MD -MP -MF .deps/mpbi-matrix-smob.Tpo -c -o mpbi-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-mpb.o -MD -MP -MF .deps/mpbi-mpb.Tpo -c -o mpbi-mpb.o `test -f 'mpb.c' || echo './'`mpb.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-main.o -MD -MP -MF .deps/mpbi-main.Tpo -c -o mpbi-main.o `test -f 'main.c' || echo './'`main.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-geom.o -MD -MP -MF .deps/mpbi-geom.Tpo -c -o mpbi-geom.o `test -f 'geom.c' || echo './'`geom.c main.c: In function 'make_name': main.c:140:8: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if (ndir > 5 && !strcmp(".libs", dir+ndir-5)) ^~ main.c:142:4: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' strcpy(base0, for_base); base = basename(base0); ^~~~~~ In file included from ctl-io.h:7, from main.c:37: main.c: In function 'main_entry': main.c:202:32: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] gh_new_procedure ("subplex", (SCM (*)(void)) subplex_scm, 7, 0, 0); ^ main.c:212:7: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] (SCM (*)(void)) adaptive_integration_scm, 6, 0, 0); ^ main.c:216:7: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] (SCM (*)(void)) cadaptive_integration_scm, 6, 0, 0); ^ In file included from mpb.c:35: mpb.c: In function 'ctl_start_hook': ../src/util/mpiglue.h:42:29: warning: statement with no effect [-Wunused-value] #define MPI_Init(argc,argv) 0 ^ mpb.c:93:6: note: in expansion of macro 'MPI_Init' MPI_Init(argc, argv); ^~~~~~~~ mpb.c:91:26: warning: unused parameter 'argc' [-Wunused-parameter] void ctl_start_hook(int *argc, char ***argv) ~~~~~^~~~ mpb.c:91:40: warning: unused parameter 'argv' [-Wunused-parameter] void ctl_start_hook(int *argc, char ***argv) ~~~~~~~~^~~~ In file included from mpb.c:35: mpb.c: In function 'ctl_stop_hook': ../src/util/mpiglue.h:43:24: warning: statement with no effect [-Wunused-value] #define MPI_Finalize() 0 ^ mpb.c:137:6: note: in expansion of macro 'MPI_Finalize' MPI_Finalize(); ^~~~~~~~~~~~ field-smob.c: In function 'integrate_fieldL': field-smob.c:407:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ material_grid_opt.c: In function 'material_grids_min_tetm_gap': In file included from medium.c:75: epsilon.c: In function 'get_epsilon': epsilon.c:434:51: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ epsilon.c:434:47: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ material_grid_opt.c:90:43: warning: unused parameter 'func_tol' [-Wunused-parameter] number func_tol, number eps_tol, ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter 'maxeval' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~~^~~~~~~ epsilon.c:434:43: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ material_grid_opt.c:91:60: warning: unused parameter 'maxtime' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~^~~~~~~ material_grid_opt.c: In function 'material_grids_maxmin_gap': material_grid_opt.c:258:13: warning: unused parameter 'func_tol' [-Wunused-parameter] number func_tol, number eps_tol, ~~~~~~~^~~~~~~~ material_grid_opt.c:259:14: warning: unused parameter 'maxeval' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~~^~~~~~~ material_grid_opt.c:259:30: warning: unused parameter 'maxtime' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~^~~~~~~ In file included from medium.c:76: mu.c: In function 'get_mu': mu.c:434:51: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ mu.c:434:47: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ mu.c:434:43: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ geom.c: In function 'overlap_integrand': geom.c:1246:13: warning: unused variable 's' [-Wunused-variable] double s[2]; ^ geom.c: In function 'point_in_or_on_prism': geom.c:2250:10: warning: unused variable 'height' [-Wunused-variable] double height = prsm->height; ^~~~~~ geom.c: In function 'dcmp': geom.c:2275:15: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] { double d1=*((double *)pd1), d2=*((double *)pd2); ^ geom.c:2275:36: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] { double d1=*((double *)pd1), d2=*((double *)pd2); ^ geom.c: In function 'triangle_normal': geom.c:2551:10: warning: unused variable 'nvnorm' [-Wunused-variable] double nvnorm=vector3_norm(nv); ^~~~~~ geom.c: In function 'point_in_fixed_pobjectp': geom.c:299:5: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:322:3: note: here case GEOM PRISM: ^~~~ fields.c: In function 'compute_field_energy_internal': fields.c:227:50: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ fields.c:227:46: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ fields.c:227:42: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ geom.c: In function 'normal_to_fixed_object': geom.c:454:5: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:483:3: note: here case GEOM PRISM: ^~~~ fields.c: In function 'fix_field_phase': fields.c:444:13: warning: unused variable 'theta' [-Wunused-variable] double theta; ^~~~~ fields.c:442:31: warning: unused variable 'sq_sum' [-Wunused-variable] real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; ^~~~~~ fields.c:442:11: warning: unused variable 'sq_sum2' [-Wunused-variable] real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; ^~~~~~~ material_grid.c: In function 'material_grids_addgradient': material_grid.c:390:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ material_grid.c:390:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ material_grid.c:390:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ material_grid.c:390:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ material_grid.c:390:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ geom.c: In function 'intersect_line_with_object': geom.c:841:3: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:912:3: note: here default: ^~~~~~~ material_grid.c: In function 'print_material_grids_deps_du_numeric': material_grid.c:634:14: warning: unused variable 'foo' [-Wunused-variable] double *foo; ^~~ In file included from material_grid.c:25: material_grid.c: In function 'synchronize_material_grid': ../src/util/mpiglue.h:58:40: warning: statement with no effect [-Wunused-value] #define MPI_Bcast(b, n, t, root, comm) 0 ^ material_grid.c:693:6: note: in expansion of macro 'MPI_Bcast' MPI_Bcast(grid, n, MPI_DOUBLE, 0, mpb_comm); ^~~~~~~~~ material_grid.c:691:10: warning: unused variable 'n' [-Wunused-variable] int n = ((int) g->size.x) * ((int) g->size.y) * ((int) g->size.z); ^ material_grid.c:690:14: warning: variable 'grid' set but not used [-Wunused-but-set-variable] double *grid; ^~~~ fields.c: In function 'compute_energy_in_dielectric': fields.c:851:51: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ fields.c:851:47: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ fields.c:851:43: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ material_grid.c: In function 'match_eps_func': material_grid.c:816:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c: In function 'output_field_to_file': fields.c:1229:10: warning: implicit declaration of function 'get_epsilon_tensor'; did you mean 'get_epsilon_aux'? [-Wimplicit-function-declaration] get_epsilon_tensor(c1,c2, 0, inv); ^~~~~~~~~~~~~~~~~~ get_epsilon_aux At top level: material_grid.c:807:15: warning: 'match_eps_func' defined but not used [-Wunused-function] static double match_eps_func(int n, const double *u, double *grad, void *data) ^~~~~~~~~~~~~~ In file included from fields.c:30: fields.c: In function 'compute_energy_in_object_list': ../src/maxwell/xyz_loop.h:39:15: warning: unused variable 'n1' [-Wunused-variable] int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1_, i2_, i1, i2, i3; \ ^~ fields.c:1316:6: note: in expansion of macro 'LOOP_XYZ' LOOP_XYZ(mdata) { ^~~~~~~~ fields.c:1287:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ fields.c:1287:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ fields.c:1287:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ fields.c:1287:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c: In function 'compute_field_integral': fields.c:1356:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ fields.c:1356:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ fields.c:1356:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ fields.c:1356:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c:1356:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ mv -f .deps/mpbi-main.Tpo .deps/mpbi-main.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-ctl-io.o -MD -MP -MF .deps/mpbi-ctl-io.Tpo -c -o mpbi-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c mu.c: In function 'mean_mu_func': mu.c:271:13: warning: 'shiftby1' may be used uninitialized in this function [-Wmaybe-uninitialized] shiftby2 = shiftby1; ~~~~~~~~~^~~~~~~~~~ mv -f .deps/mpbi-epsilon_file.Tpo .deps/mpbi-epsilon_file.Po sed "s%\./mpb%"/usr/bin/"mpbi%g" \ mpb-split-preinstall > mpbi-split chmod u+x mpbi-split ctl-io.c: In function 'block_equal': ctl-io.c:513:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'cylinder_equal': ctl-io.c:553:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'geometric_object_equal': ctl-io.c:590:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'material_type_equal': ctl-io.c:650:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'lattice_destroy': ctl-io.c:656:30: warning: unused parameter 'o' [-Wunused-parameter] void lattice_destroy(lattice o) ~~~~~~~~^ ctl-io.c: In function 'ellipsoid_destroy': ctl-io.c:660:34: warning: unused parameter 'o' [-Wunused-parameter] void ellipsoid_destroy(ellipsoid o) ~~~~~~~~~~^ ctl-io.c: In function 'sphere_destroy': ctl-io.c:689:28: warning: unused parameter 'o' [-Wunused-parameter] void sphere_destroy(sphere o) ~~~~~~~^ ctl-io.c: In function 'wedge_destroy': ctl-io.c:693:26: warning: unused parameter 'o' [-Wunused-parameter] void wedge_destroy(wedge o) ~~~~~~^ ctl-io.c: In function 'cone_destroy': ctl-io.c:697:24: warning: unused parameter 'o' [-Wunused-parameter] void cone_destroy(cone o) ~~~~~^ ctl-io.c: In function 'material_grid_destroy': ctl-io.c:751:42: warning: unused parameter 'o' [-Wunused-parameter] void material_grid_destroy(material_grid o) ~~~~~~~~~~~~~~^ ctl-io.c: In function 'material_function_destroy': ctl-io.c:755:50: warning: unused parameter 'o' [-Wunused-parameter] void material_function_destroy(material_function o) ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function 'medium_anisotropic_destroy': ctl-io.c:759:52: warning: unused parameter 'o' [-Wunused-parameter] void medium_anisotropic_destroy(medium_anisotropic o) ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function 'medium_destroy': ctl-io.c:763:28: warning: unused parameter 'o' [-Wunused-parameter] void medium_destroy(medium o) ~~~~~~~^ mv -f .deps/mpbi-material_grid_opt.Tpo .deps/mpbi-material_grid_opt.Po mv -f .deps/mpbi-matrix-smob.Tpo .deps/mpbi-matrix-smob.Po material_grid.c: In function 'material_grids_addgradient': In file included from medium.c:75: epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:13: warning: 'shiftby1' may be used uninitialized in this function [-Wmaybe-uninitialized] shiftby2 = shiftby1; ~~~~~~~~~^~~~~~~~~~ material_grid.c:390:13: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ mv -f .deps/mpbi-field-smob.Tpo .deps/mpbi-field-smob.Po mv -f .deps/mpbi-mpb.Tpo .deps/mpbi-mpb.Po fields.c: In function 'compute_energy_in_object_list': fields.c:1287:13: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c: In function 'compute_field_integral': fields.c:1356:13: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ mv -f .deps/mpbi-medium.Tpo .deps/mpbi-medium.Po mv -f .deps/mpbi-material_grid.Tpo .deps/mpbi-material_grid.Po mv -f .deps/mpbi-fields.Tpo .deps/mpbi-fields.Po mv -f .deps/mpbi-ctl-io.Tpo .deps/mpbi-ctl-io.Po mv -f .deps/mpbi-geom.Tpo .deps/mpbi-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpbi mpbi-medium.o mpbi-epsilon_file.o mpbi-field-smob.o mpbi-fields.o mpbi-material_grid.o mpbi-material_grid_opt.o mpbi-matrix-smob.o mpbi-mpb.o mpbi-main.o mpbi-geom.o mpbi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpbi.la -lctl -lguile-2.2 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpbi mpbi-medium.o mpbi-epsilon_file.o mpbi-field-smob.o mpbi-fields.o mpbi-material_grid.o mpbi-material_grid_opt.o mpbi-matrix-smob.o mpbi-mpb.o mpbi-main.o mpbi-geom.o mpbi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpbi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lctl -lguile-2.2 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[5]: Leaving directory '/build/mpb-1.7.0/mpb' make[4]: Leaving directory '/build/mpb-1.7.0/mpb' Making all in examples make[4]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/mpb-1.7.0/examples' Making all in utils make[4]: Entering directory '/build/mpb-1.7.0/utils' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/matrixio -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_data-mpb-data.o -MD -MP -MF .deps/mpbi_data-mpb-data.Tpo -c -o mpbi_data-mpb-data.o `test -f 'mpb-data.c' || echo './'`mpb-data.c mv -f .deps/mpbi_data-mpb-data.Tpo .deps/mpbi_data-mpb-data.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpbi-data mpbi_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/libmpbi.la -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpbi-data mpbi_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpbi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/mpb-1.7.0/utils' make[4]: Entering directory '/build/mpb-1.7.0' make[4]: Leaving directory '/build/mpb-1.7.0' make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' make install prefix=/build/mpb-1.7.0/debian/build-tmp/mpb/usr make[2]: Entering directory '/build/mpb-1.7.0' Making install in src make[3]: Entering directory '/build/mpb-1.7.0/src' make install-recursive make[4]: Entering directory '/build/mpb-1.7.0/src' Making install in util make[5]: Entering directory '/build/mpb-1.7.0/src/util' make install-am make[6]: Entering directory '/build/mpb-1.7.0/src/util' make[7]: Entering directory '/build/mpb-1.7.0/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/mpb-1.7.0/src/util' make[6]: Leaving directory '/build/mpb-1.7.0/src/util' make[5]: Leaving directory '/build/mpb-1.7.0/src/util' Making install in matrices make[5]: Entering directory '/build/mpb-1.7.0/src/matrices' make[6]: Entering directory '/build/mpb-1.7.0/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/matrices' make[5]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making install in matrixio make[5]: Entering directory '/build/mpb-1.7.0/src/matrixio' make[6]: Entering directory '/build/mpb-1.7.0/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/matrixio' make[5]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making install in maxwell make[5]: Entering directory '/build/mpb-1.7.0/src/maxwell' make[6]: Entering directory '/build/mpb-1.7.0/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[5]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[5]: Entering directory '/build/mpb-1.7.0/src' make[6]: Entering directory '/build/mpb-1.7.0/src' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpbi.la '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpbi.lai /build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib/libmpbi.la libtool: install: /usr/bin/install -c .libs/libmpbi.a /build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib/libmpbi.a libtool: install: chmod 644 /build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib/libmpbi.a libtool: install: ranlib /build/mpb-1.7.0/debian/build-tmp/mpb/usr/lib/libmpbi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/include' /usr/bin/install -c -m 644 mpbi.h '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/include' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/include/mpb' make[6]: Leaving directory '/build/mpb-1.7.0/src' make[5]: Leaving directory '/build/mpb-1.7.0/src' make[4]: Leaving directory '/build/mpb-1.7.0/src' make[3]: Leaving directory '/build/mpb-1.7.0/src' Making install in tests make[3]: Entering directory '/build/mpb-1.7.0/tests' make[4]: Entering directory '/build/mpb-1.7.0/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0/tests' make[3]: Leaving directory '/build/mpb-1.7.0/tests' Making install in mpb make[3]: Entering directory '/build/mpb-1.7.0/mpb' make install-am make[4]: Entering directory '/build/mpb-1.7.0/mpb' make[5]: Entering directory '/build/mpb-1.7.0/mpb' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpbi /build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin/mpbi /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' /usr/bin/install -c mpbi-split '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/man/man1' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/mpb' make[5]: Leaving directory '/build/mpb-1.7.0/mpb' make[4]: Leaving directory '/build/mpb-1.7.0/mpb' make[3]: Leaving directory '/build/mpb-1.7.0/mpb' Making install in examples make[3]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0/examples' make[3]: Leaving directory '/build/mpb-1.7.0/examples' Making install in utils make[3]: Entering directory '/build/mpb-1.7.0/utils' make[4]: Entering directory '/build/mpb-1.7.0/utils' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi-data '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpbi-data /build/mpb-1.7.0/debian/build-tmp/mpb/usr/bin/mpbi-data /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/man/man1' make[4]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Entering directory '/build/mpb-1.7.0' make[4]: Entering directory '/build/mpb-1.7.0' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0' make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' make clean make[2]: Entering directory '/build/mpb-1.7.0' Making clean in src make[3]: Entering directory '/build/mpb-1.7.0/src' Making clean in util make[4]: Entering directory '/build/mpb-1.7.0/src/util' rm -rf .libs _libs test -z "libutil.la" || rm -f libutil.la rm -f ./so_locations rm -f sphere_quad rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/util' Making clean in matrices make[4]: Entering directory '/build/mpb-1.7.0/src/matrices' rm -rf .libs _libs test -z "libmatrices.la" || rm -f libmatrices.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making clean in matrixio make[4]: Entering directory '/build/mpb-1.7.0/src/matrixio' rm -rf .libs _libs test -z "libmatrixio.a" || rm -f libmatrixio.a rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making clean in maxwell make[4]: Entering directory '/build/mpb-1.7.0/src/maxwell' rm -rf .libs _libs test -z "libmaxwell.la" || rm -f libmaxwell.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[4]: Entering directory '/build/mpb-1.7.0/src' test -z "libmpbi.la" || rm -f libmpbi.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src' make[3]: Leaving directory '/build/mpb-1.7.0/src' Making clean in tests make[3]: Entering directory '/build/mpb-1.7.0/tests' rm -rf .libs _libs rm -f blastest.out maxwell_test.out maxwell_test_2.out rm -f malloctest blastest eigs_test maxwell_test normal_vectors rm -f *.o rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/tests' Making clean in mpb make[3]: Entering directory '/build/mpb-1.7.0/mpb' rm -f mpbi rm -rf .libs _libs rm -f ctl-io.* main.* geom.* rm -f *.o rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/mpb' Making clean in examples make[3]: Entering directory '/build/mpb-1.7.0/examples' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/examples' Making clean in utils make[3]: Entering directory '/build/mpb-1.7.0/utils' rm -f mpbi-data rm -rf .libs _libs rm -f *.o rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Entering directory '/build/mpb-1.7.0' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' echo "Step2: inverse version end" Step2: inverse version end # normal version with mpi echo "Step3: mpi version start" Step3: mpi version start #XXX dh_auto_configure -- --with-mpi --build=i686-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --with-mpi --build=i686-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) i686-pc-linux-gnu checking host system type... (cached) i686-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /bin/sed checking for grep that handles long lines and -e... (cached) /bin/grep checking for egrep... (cached) /bin/grep -E checking for fgrep... (cached) /bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /bin/dd checking how to truncate binary pipes... (cached) /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking how to run the C preprocessor... (cached) mpicc -E checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for mpicc... mpicc checking for MPI_Init... yes checking for mpi.h... yes checking for fftw_mpi_execute_dft in -lfftw3_mpi... yes checking for mpirun... mpirun checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for H5Pset_mpi... no checking for H5Pset_fapl_mpio... yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for ANSI C header files... (cached) yes checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes configure: updating cache ../config.cache checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build make -j10 make[2]: Entering directory '/build/mpb-1.7.0' make all-recursive make[3]: Entering directory '/build/mpb-1.7.0' Making all in src make[4]: Entering directory '/build/mpb-1.7.0/src' cp -f mpbconf.h mpb_mpi.h make all-recursive make[5]: Entering directory '/build/mpb-1.7.0/src' Making all in util make[6]: Entering directory '/build/mpb-1.7.0/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/build/mpb-1.7.0/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libutil.a debug_malloc.o mpi_utils.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/build/mpb-1.7.0/src/util' make[6]: Leaving directory '/build/mpb-1.7.0/src/util' Making all in matrices make[6]: Entering directory '/build/mpb-1.7.0/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c -o libmatrices_la-eigensolver.lo `test -f 'eigensolver.c' || echo './'`eigensolver.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c -o libmatrices_la-eigensolver_utils.lo `test -f 'eigensolver_utils.c' || echo './'`eigensolver_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c -o libmatrices_la-linmin.lo `test -f 'linmin.c' || echo './'`linmin.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c -o libmatrices_la-matrices.lo `test -f 'matrices.c' || echo './'`matrices.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c linmin.c -o libmatrices_la-linmin.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c matrices.c -o libmatrices_la-matrices.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c evectmatrix.c -o libmatrices_la-evectmatrix.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c eigensolver_davidson.c -o libmatrices_la-eigensolver_davidson.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-linmin.Tpo .deps/libmatrices_la-linmin.Plo mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making all in matrixio make[6]: Entering directory '/build/mpb-1.7.0/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function 'matrixio_open_': matrixio.c:405:91: warning: statement with no effect [-Wunused-value] IF_EXCLUSIVE(if (parallel) mpi_begin_critical_section(matrixio_critical_section_tag),0); ^ matrixio.c:56:32: note: in definition of macro 'IF_EXCLUSIVE' # define IF_EXCLUSIVE(yes,no) no ^~ matrixio.c: In function 'matrixio_close': matrixio.c:432:94: warning: statement with no effect [-Wunused-value] IF_EXCLUSIVE(if (id.parallel) mpi_end_critical_section(matrixio_critical_section_tag++),0); ^ matrixio.c:56:32: note: in definition of macro 'IF_EXCLUSIVE' # define IF_EXCLUSIVE(yes,no) no ^~ In file included from matrixio.c:29: matrixio.c: In function 'matrixio_open_dataset': matrixio.c:516:23: warning: comparison of integer expressions of different signedness: 'hsize_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] CHECK(dims_copy[i] == dims[i], ^~ ./../util/check.h:37:12: note: in definition of macro 'CHECK' if (!(condition)) { \ ^~~~~~~~~ matrixio.c: In function 'matrixio_read_real_data': matrixio.c:837:28: warning: comparison of integer expressions of different signedness: 'hsize_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] CHECK(dims_copy[i] == dims[i], ^~ ./../util/check.h:37:12: note: in definition of macro 'CHECK' if (!(condition)) { \ ^~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making all in maxwell make[6]: Entering directory '/build/mpb-1.7.0/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o maxwell_op.c: In function 'maxwell_compute_fft': maxwell_op.c:177:12: warning: unused variable 'rarray_out' [-Wunused-variable] real *rarray_out = (real *) array_out; ^~~~~~~~~~ maxwell_op.c:175:12: warning: unused variable 'rarray_in' [-Wunused-variable] real *rarray_in = (real *) array_in; ^~~~~~~~~ In file included from maxwell_eps.c:29: maxwell_eps.c: In function 'set_maxwell_dielectric': xyz_loop.h:28:28: warning: unused variable 'n2' [-Wunused-variable] int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ ^~ maxwell_eps.c:421:6: note: in expansion of macro 'LOOP_XYZ' LOOP_XYZ(md) { ^~~~~~~~ maxwell_eps.c:401:35: warning: unused variable 'local_n3' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ maxwell_eps.c:401:20: warning: unused variable 'local_y_start' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~~~~~~ maxwell_eps.c:401:10: warning: unused variable 'local_n2' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ maxwell_eps.c:395:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k; ^ maxwell_eps.c:395:13: warning: unused variable 'j' [-Wunused-variable] int i, j, k; ^ maxwell_eps.c:395:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k; ^ maxwell_op.c: In function 'maxwell_vectorfield_otherhalf': maxwell_op.c:637:50: warning: unused parameter 'd' [-Wunused-parameter] void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, ~~~~~~~~~~~~~~^ maxwell_op.c:637:69: warning: unused parameter 'field' [-Wunused-parameter] void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:638:13: warning: unused parameter 'phasex' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c:638:26: warning: unused parameter 'phasey' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c:638:39: warning: unused parameter 'phasez' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c: In function 'maxwell_cscalarfield_otherhalf': maxwell_op.c:841:51: warning: unused parameter 'd' [-Wunused-parameter] void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, ~~~~~~~~~~~~~~^ maxwell_op.c:841:70: warning: unused parameter 'field' [-Wunused-parameter] void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:842:14: warning: unused parameter 'phasex' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c:842:27: warning: unused parameter 'phasey' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c:842:40: warning: unused parameter 'phasez' [-Wunused-parameter] real phasex, real phasey, real phasez) ~~~~~^~~~~~ maxwell_op.c: In function 'maxwell_scalarfield_otherhalf': maxwell_op.c:1042:50: warning: unused parameter 'd' [-Wunused-parameter] void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) ~~~~~~~~~~~~~~^ maxwell_op.c:1042:59: warning: unused parameter 'field' [-Wunused-parameter] void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) ~~~~~~^~~~~ At top level: maxwell_eps.c:181:12: warning: 'sym_matrix_eq' defined but not used [-Wunused-function] static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) ^~~~~~~~~~~~~ mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[6]: Entering directory '/build/mpb-1.7.0/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 2:0:1 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmpb_mpi.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpb_mpi.lax/libutil.a && ar x "/build/mpb-1.7.0/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpb_mpi.lax/libmatrices.a && ar x "/build/mpb-1.7.0/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpb_mpi.lax/libmaxwell.a && ar x "/build/mpb-1.7.0/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cru .libs/libmpb_mpi.a .libs/libmpb_mpi.lax/libutil.a/debug_malloc.o .libs/libmpb_mpi.lax/libutil.a/mpi_utils.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmpb_mpi.a libtool: link: rm -fr .libs/libmpb_mpi.lax libtool: link: ( cd ".libs" && rm -f "libmpb_mpi.la" && ln -s "../libmpb_mpi.la" "libmpb_mpi.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src' make[5]: Leaving directory '/build/mpb-1.7.0/src' make[4]: Leaving directory '/build/mpb-1.7.0/src' Making all in tests make[4]: Entering directory '/build/mpb-1.7.0/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c eigs_test.c: In function 'Aop': eigs_test.c:293:51: warning: unused parameter 'data' [-Wunused-parameter] void Aop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:294:7: warning: unused parameter 'is_current_eigenvector' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:43: warning: unused parameter 'Work' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~~~~~~~~~^~~~ eigs_test.c: In function 'Bop': eigs_test.c:303:51: warning: unused parameter 'data' [-Wunused-parameter] void Bop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:304:7: warning: unused parameter 'is_current_eigenvector' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:43: warning: unused parameter 'Work' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~~~~~~~~~^~~~ eigs_test.c: In function 'Ainvop': eigs_test.c:313:54: warning: unused parameter 'data' [-Wunused-parameter] void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:314:18: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ eigs_test.c:314:27: warning: unused parameter 'eigenvals' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~^~~~~~~~~ eigs_test.c:314:47: warning: unused parameter 'YtY' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~^~~ eigs_test.c: In function 'Cop_old': eigs_test.c:324:55: warning: unused parameter 'data' [-Wunused-parameter] void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:325:15: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ eigs_test.c:325:24: warning: unused parameter 'eigenvals' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~^~~~~~~~~ eigs_test.c: In function 'Cop': eigs_test.c:349:51: warning: unused parameter 'data' [-Wunused-parameter] void Cop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:350:16: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/mpb-1.7.0/tests' Making all in mpb make[4]: Entering directory '/build/mpb-1.7.0/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/build/mpb-1.7.0/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-medium.o -MD -MP -MF .deps/mpb_mpi-medium.Tpo -c -o mpb_mpi-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-epsilon_file.o -MD -MP -MF .deps/mpb_mpi-epsilon_file.Tpo -c -o mpb_mpi-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-field-smob.o -MD -MP -MF .deps/mpb_mpi-field-smob.Tpo -c -o mpb_mpi-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-fields.o -MD -MP -MF .deps/mpb_mpi-fields.Tpo -c -o mpb_mpi-fields.o `test -f 'fields.c' || echo './'`fields.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-material_grid.o -MD -MP -MF .deps/mpb_mpi-material_grid.Tpo -c -o mpb_mpi-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-material_grid_opt.o -MD -MP -MF .deps/mpb_mpi-material_grid_opt.Tpo -c -o mpb_mpi-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-matrix-smob.o -MD -MP -MF .deps/mpb_mpi-matrix-smob.Tpo -c -o mpb_mpi-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-mpb.o -MD -MP -MF .deps/mpb_mpi-mpb.Tpo -c -o mpb_mpi-mpb.o `test -f 'mpb.c' || echo './'`mpb.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-main.o -MD -MP -MF .deps/mpb_mpi-main.Tpo -c -o mpb_mpi-main.o `test -f 'main.c' || echo './'`main.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-geom.o -MD -MP -MF .deps/mpb_mpi-geom.Tpo -c -o mpb_mpi-geom.o `test -f 'geom.c' || echo './'`geom.c In file included from medium.c:75: epsilon.c: In function 'get_epsilon': epsilon.c:434:51: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ epsilon.c:434:47: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ epsilon.c:434:43: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ epsilon.c:434:26: warning: variable 'last_dim_stored' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~~~ epsilon.c:434:16: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~ In file included from medium.c:76: mu.c: In function 'get_mu': mu.c:434:51: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ mu.c:434:47: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ mu.c:434:43: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ mu.c:434:26: warning: variable 'last_dim_stored' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~~~ mu.c:434:16: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~ fields.c: In function 'compute_field_energy_internal': fields.c:227:50: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ fields.c:227:46: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ fields.c:227:42: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ fields.c:227:25: warning: variable 'last_dim_stored' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~~~ fields.c:227:15: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~ fields.c: In function 'get_val': fields.c:579:1: warning: no return statement in function returning non-void [-Wreturn-type] } ^ fields.c:552:35: warning: parameter 'conjugate' set but not used [-Wunused-but-set-parameter] real *data, int stride, int conjugate) ~~~~^~~~~~~~~ fields.c:550:25: warning: unused parameter 'ix' [-Wunused-parameter] static real get_val(int ix, int iy, int iz, ~~~~^~ fields.c:550:33: warning: unused parameter 'iy' [-Wunused-parameter] static real get_val(int ix, int iy, int iz, ~~~~^~ fields.c:550:41: warning: unused parameter 'iz' [-Wunused-parameter] static real get_val(int ix, int iy, int iz, ~~~~^~ fields.c:551:11: warning: unused parameter 'nx' [-Wunused-parameter] int nx, int ny, int nz, int last_dim_size, ~~~~^~ fields.c:551:19: warning: unused parameter 'ny' [-Wunused-parameter] int nx, int ny, int nz, int last_dim_size, ~~~~^~ fields.c:551:27: warning: unused parameter 'nz' [-Wunused-parameter] int nx, int ny, int nz, int last_dim_size, ~~~~^~ fields.c:551:35: warning: unused parameter 'last_dim_size' [-Wunused-parameter] int nx, int ny, int nz, int last_dim_size, ~~~~^~~~~~~~~~~~~ main.c: In function 'make_name': fields.c:552:13: warning: unused parameter 'data' [-Wunused-parameter] real *data, int stride, int conjugate) ~~~~~~^~~~ main.c:140:8: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if (ndir > 5 && !strcmp(".libs", dir+ndir-5)) ^~ main.c:142:4: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' strcpy(base0, for_base); base = basename(base0); ^~~~~~ fields.c:552:23: warning: unused parameter 'stride' [-Wunused-parameter] real *data, int stride, int conjugate) ~~~~^~~~~~ In file included from ctl-io.h:7, from main.c:37: main.c: In function 'main_entry': main.c:202:32: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] gh_new_procedure ("subplex", (SCM (*)(void)) subplex_scm, 7, 0, 0); ^ main.c:212:7: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] (SCM (*)(void)) adaptive_integration_scm, 6, 0, 0); ^ main.c:216:7: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] (SCM (*)(void)) cadaptive_integration_scm, 6, 0, 0); ^ field-smob.c: In function 'integrate_fieldL': field-smob.c:409:35: warning: unused variable 'local_n3' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ field-smob.c:407:54: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~~ field-smob.c:407:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ field-smob.c:407:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ field-smob.c:407:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ fields.c: In function 'compute_energy_in_dielectric': fields.c:851:51: warning: variable 'local_y_start' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~ fields.c:851:47: warning: variable 'nz' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ fields.c:851:43: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~ fields.c:851:26: warning: variable 'last_dim_stored' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~~~~~~~~ fields.c:851:16: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; ^~~~~~~~ fields.c: In function 'output_scalarfield': fields.c:924:15: warning: unused parameter 'last_dim_index' [-Wunused-parameter] int last_dim_index, ~~~~^~~~~~~~~~~~~~ fields.c:925:15: warning: unused parameter 'last_dim_start' [-Wunused-parameter] int last_dim_start, int last_dim_size, ~~~~^~~~~~~~~~~~~~ fields.c:925:35: warning: unused parameter 'last_dim_size' [-Wunused-parameter] int last_dim_start, int last_dim_size, ~~~~^~~~~~~~~~~~~ fields.c:926:15: warning: unused parameter 'first_dim_start' [-Wunused-parameter] int first_dim_start, int first_dim_size, ~~~~^~~~~~~~~~~~~~~ fields.c:926:36: warning: unused parameter 'first_dim_size' [-Wunused-parameter] int first_dim_start, int first_dim_size, ~~~~^~~~~~~~~~~~~~ fields.c:927:15: warning: unused parameter 'write_start0_special' [-Wunused-parameter] int write_start0_special) ~~~~^~~~~~~~~~~~~~~~~~~~ material_grid_opt.c: In function 'material_grids_min_tetm_gap': material_grid_opt.c:90:43: warning: unused parameter 'func_tol' [-Wunused-parameter] number func_tol, number eps_tol, ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter 'maxeval' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter 'maxtime' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~^~~~~~~ At top level: field-smob.c:395:17: warning: 'cvector3_conj' defined but not used [-Wunused-function] static cvector3 cvector3_conj(cvector3 c) ^~~~~~~~~~~~~ fields.c: In function 'output_field_to_file': fields.c:1229:10: warning: implicit declaration of function 'get_epsilon_tensor'; did you mean 'get_epsilon_aux'? [-Wimplicit-function-declaration] get_epsilon_tensor(c1,c2, 0, inv); ^~~~~~~~~~~~~~~~~~ get_epsilon_aux material_grid_opt.c: In function 'material_grids_maxmin_gap': material_grid_opt.c:258:13: warning: unused parameter 'func_tol' [-Wunused-parameter] number func_tol, number eps_tol, ~~~~~~~^~~~~~~~ material_grid_opt.c:259:14: warning: unused parameter 'maxeval' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~~^~~~~~~ material_grid_opt.c:259:30: warning: unused parameter 'maxtime' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~^~~~~~~ In file included from fields.c:30: fields.c: In function 'compute_energy_in_object_list': ../src/maxwell/xyz_loop.h:28:28: warning: unused variable 'n2' [-Wunused-variable] int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ ^~ fields.c:1316:6: note: in expansion of macro 'LOOP_XYZ' LOOP_XYZ(mdata) { ^~~~~~~~ fields.c:1289:35: warning: unused variable 'local_n3' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ fields.c:1289:20: warning: unused variable 'local_y_start' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~~~~~~ fields.c:1289:10: warning: unused variable 'local_n2' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ fields.c:1287:54: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~~ fields.c:1287:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ fields.c:1287:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ fields.c:1287:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ fields.c:1287:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c:1287:13: warning: unused variable 'j' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ In file included from fields.c:30: fields.c: In function 'compute_field_integral': ../src/maxwell/xyz_loop.h:28:28: warning: unused variable 'n2' [-Wunused-variable] int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ ^~ fields.c:1388:6: note: in expansion of macro 'LOOP_XYZ' LOOP_XYZ(mdata) { ^~~~~~~~ fields.c:1358:35: warning: unused variable 'local_n3' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ fields.c:1358:20: warning: unused variable 'local_y_start' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~~~~~~ fields.c:1358:10: warning: unused variable 'local_n2' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ fields.c:1356:54: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~~ fields.c:1356:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ fields.c:1356:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ fields.c:1356:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ fields.c:1356:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c:1356:13: warning: unused variable 'j' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c:1356:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ geom.c: In function 'overlap_integrand': geom.c:1246:13: warning: unused variable 's' [-Wunused-variable] double s[2]; ^ mu.c: In function 'mean_mu_func': mu.c:271:13: warning: 'shiftby1' may be used uninitialized in this function [-Wmaybe-uninitialized] shiftby2 = shiftby1; ~~~~~~~~~^~~~~~~~~~ geom.c: In function 'point_in_or_on_prism': geom.c:2250:10: warning: unused variable 'height' [-Wunused-variable] double height = prsm->height; ^~~~~~ geom.c: In function 'dcmp': geom.c:2275:15: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] { double d1=*((double *)pd1), d2=*((double *)pd2); ^ geom.c:2275:36: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] { double d1=*((double *)pd1), d2=*((double *)pd2); ^ In file included from material_grid.c:27: material_grid.c: In function 'material_grids_addgradient': ../src/maxwell/xyz_loop.h:28:28: warning: unused variable 'n2' [-Wunused-variable] int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ ^~ material_grid.c:419:6: note: in expansion of macro 'LOOP_XYZ' LOOP_XYZ(mdata) { ^~~~~~~~ material_grid.c:392:35: warning: unused variable 'local_n3' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ material_grid.c:392:20: warning: unused variable 'local_y_start' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~~~~~~ material_grid.c:392:10: warning: unused variable 'local_n2' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ material_grid.c:390:54: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~~ material_grid.c:390:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ material_grid.c:390:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ geom.c: In function 'triangle_normal': material_grid.c:390:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ material_grid.c:390:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ material_grid.c:390:13: warning: unused variable 'j' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ material_grid.c:390:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ geom.c:2551:10: warning: unused variable 'nvnorm' [-Wunused-variable] double nvnorm=vector3_norm(nv); ^~~~~~ material_grid.c: In function 'print_material_grids_deps_du_numeric': material_grid.c:634:14: warning: unused variable 'foo' [-Wunused-variable] double *foo; ^~~ material_grid.c: In function 'match_eps_func': material_grid.c:818:35: warning: unused variable 'local_n3' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ material_grid.c:816:54: warning: variable 'last_dim' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~~ material_grid.c:816:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ material_grid.c:816:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ material_grid.c:816:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ geom.c: In function 'point_in_fixed_pobjectp': geom.c:299:5: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:322:3: note: here case GEOM PRISM: ^~~~ geom.c: In function 'normal_to_fixed_object': geom.c:454:5: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:483:3: note: here case GEOM PRISM: ^~~~ geom.c: In function 'intersect_line_with_object': geom.c:841:3: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:912:3: note: here default: ^~~~~~~ At top level: material_grid.c:807:15: warning: 'match_eps_func' defined but not used [-Wunused-function] static double match_eps_func(int n, const double *u, double *grad, void *data) ^~~~~~~~~~~~~~ mv -f .deps/mpb_mpi-epsilon_file.Tpo .deps/mpb_mpi-epsilon_file.Po mv -f .deps/mpb_mpi-main.Tpo .deps/mpb_mpi-main.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-ctl-io.o -MD -MP -MF .deps/mpb_mpi-ctl-io.Tpo -c -o mpb_mpi-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c mv -f .deps/mpb_mpi-material_grid_opt.Tpo .deps/mpb_mpi-material_grid_opt.Po In file included from medium.c:75: epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:13: warning: 'shiftby1' may be used uninitialized in this function [-Wmaybe-uninitialized] shiftby2 = shiftby1; ~~~~~~~~~^~~~~~~~~~ ctl-io.c: In function 'block_equal': ctl-io.c:513:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'cylinder_equal': ctl-io.c:553:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'geometric_object_equal': ctl-io.c:590:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'material_type_equal': ctl-io.c:650:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'lattice_destroy': ctl-io.c:656:30: warning: unused parameter 'o' [-Wunused-parameter] void lattice_destroy(lattice o) ~~~~~~~~^ ctl-io.c: In function 'ellipsoid_destroy': ctl-io.c:660:34: warning: unused parameter 'o' [-Wunused-parameter] void ellipsoid_destroy(ellipsoid o) ~~~~~~~~~~^ ctl-io.c: In function 'sphere_destroy': ctl-io.c:689:28: warning: unused parameter 'o' [-Wunused-parameter] void sphere_destroy(sphere o) ~~~~~~~^ ctl-io.c: In function 'wedge_destroy': ctl-io.c:693:26: warning: unused parameter 'o' [-Wunused-parameter] void wedge_destroy(wedge o) ~~~~~~^ ctl-io.c: In function 'cone_destroy': ctl-io.c:697:24: warning: unused parameter 'o' [-Wunused-parameter] void cone_destroy(cone o) ~~~~~^ ctl-io.c: In function 'material_grid_destroy': ctl-io.c:751:42: warning: unused parameter 'o' [-Wunused-parameter] void material_grid_destroy(material_grid o) ~~~~~~~~~~~~~~^ ctl-io.c: In function 'material_function_destroy': ctl-io.c:755:50: warning: unused parameter 'o' [-Wunused-parameter] void material_function_destroy(material_function o) ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function 'medium_anisotropic_destroy': ctl-io.c:759:52: warning: unused parameter 'o' [-Wunused-parameter] void medium_anisotropic_destroy(medium_anisotropic o) ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function 'medium_destroy': ctl-io.c:763:28: warning: unused parameter 'o' [-Wunused-parameter] void medium_destroy(medium o) ~~~~~~~^ mv -f .deps/mpb_mpi-matrix-smob.Tpo .deps/mpb_mpi-matrix-smob.Po mv -f .deps/mpb_mpi-field-smob.Tpo .deps/mpb_mpi-field-smob.Po mv -f .deps/mpb_mpi-mpb.Tpo .deps/mpb_mpi-mpb.Po mv -f .deps/mpb_mpi-medium.Tpo .deps/mpb_mpi-medium.Po mv -f .deps/mpb_mpi-fields.Tpo .deps/mpb_mpi-fields.Po mv -f .deps/mpb_mpi-material_grid.Tpo .deps/mpb_mpi-material_grid.Po mv -f .deps/mpb_mpi-ctl-io.Tpo .deps/mpb_mpi-ctl-io.Po mv -f .deps/mpb_mpi-geom.Tpo .deps/mpb_mpi-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpb_mpi mpb_mpi-medium.o mpb_mpi-epsilon_file.o mpb_mpi-field-smob.o mpb_mpi-fields.o mpb_mpi-material_grid.o mpb_mpi-material_grid_opt.o mpb_mpi-matrix-smob.o mpb_mpi-mpb.o mpb_mpi-main.o mpb_mpi-geom.o mpb_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpb_mpi.la -lctl -lguile-2.2 -lgc -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpb_mpi mpb_mpi-medium.o mpb_mpi-epsilon_file.o mpb_mpi-field-smob.o mpb_mpi-fields.o mpb_mpi-material_grid.o mpb_mpi-material_grid_opt.o mpb_mpi-matrix-smob.o mpb_mpi-mpb.o mpb_mpi-main.o mpb_mpi-geom.o mpb_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lctl -lguile-2.2 -lgc -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[5]: Leaving directory '/build/mpb-1.7.0/mpb' make[4]: Leaving directory '/build/mpb-1.7.0/mpb' Making all in examples make[4]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/mpb-1.7.0/examples' Making all in utils make[4]: Entering directory '/build/mpb-1.7.0/utils' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/mpb-1.7.0/utils' make[4]: Entering directory '/build/mpb-1.7.0' make[4]: Leaving directory '/build/mpb-1.7.0' make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' make install prefix=/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr make[2]: Entering directory '/build/mpb-1.7.0' Making install in src make[3]: Entering directory '/build/mpb-1.7.0/src' make install-recursive make[4]: Entering directory '/build/mpb-1.7.0/src' Making install in util make[5]: Entering directory '/build/mpb-1.7.0/src/util' make install-am make[6]: Entering directory '/build/mpb-1.7.0/src/util' make[7]: Entering directory '/build/mpb-1.7.0/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/mpb-1.7.0/src/util' make[6]: Leaving directory '/build/mpb-1.7.0/src/util' make[5]: Leaving directory '/build/mpb-1.7.0/src/util' Making install in matrices make[5]: Entering directory '/build/mpb-1.7.0/src/matrices' make[6]: Entering directory '/build/mpb-1.7.0/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/matrices' make[5]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making install in matrixio make[5]: Entering directory '/build/mpb-1.7.0/src/matrixio' make[6]: Entering directory '/build/mpb-1.7.0/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/matrixio' make[5]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making install in maxwell make[5]: Entering directory '/build/mpb-1.7.0/src/maxwell' make[6]: Entering directory '/build/mpb-1.7.0/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[5]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[5]: Entering directory '/build/mpb-1.7.0/src' make[6]: Entering directory '/build/mpb-1.7.0/src' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpb_mpi.la '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpb_mpi.lai /build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.la libtool: install: /usr/bin/install -c .libs/libmpb_mpi.a /build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.a libtool: install: chmod 644 /build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.a libtool: install: ranlib /build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/include' /usr/bin/install -c -m 644 mpb_mpi.h '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/include' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/include/mpb' make[6]: Leaving directory '/build/mpb-1.7.0/src' make[5]: Leaving directory '/build/mpb-1.7.0/src' make[4]: Leaving directory '/build/mpb-1.7.0/src' make[3]: Leaving directory '/build/mpb-1.7.0/src' Making install in tests make[3]: Entering directory '/build/mpb-1.7.0/tests' make[4]: Entering directory '/build/mpb-1.7.0/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0/tests' make[3]: Leaving directory '/build/mpb-1.7.0/tests' Making install in mpb make[3]: Entering directory '/build/mpb-1.7.0/mpb' make install-am make[4]: Entering directory '/build/mpb-1.7.0/mpb' make[5]: Entering directory '/build/mpb-1.7.0/mpb' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpb_mpi '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/bin/./mpb-mpi' libtool: install: /usr/bin/install -c mpb_mpi /build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/bin/./mpb-mpi /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/man/man1' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/mpb' make[5]: Leaving directory '/build/mpb-1.7.0/mpb' make[4]: Leaving directory '/build/mpb-1.7.0/mpb' make[3]: Leaving directory '/build/mpb-1.7.0/mpb' Making install in examples make[3]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0/examples' make[3]: Leaving directory '/build/mpb-1.7.0/examples' Making install in utils make[3]: Entering directory '/build/mpb-1.7.0/utils' make[4]: Entering directory '/build/mpb-1.7.0/utils' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/man/man1' make[4]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Entering directory '/build/mpb-1.7.0' make[4]: Entering directory '/build/mpb-1.7.0' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0' make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' make clean make[2]: Entering directory '/build/mpb-1.7.0' Making clean in src make[3]: Entering directory '/build/mpb-1.7.0/src' Making clean in util make[4]: Entering directory '/build/mpb-1.7.0/src/util' rm -rf .libs _libs test -z "libutil.la" || rm -f libutil.la rm -f ./so_locations rm -f sphere_quad rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/util' Making clean in matrices make[4]: Entering directory '/build/mpb-1.7.0/src/matrices' rm -rf .libs _libs test -z "libmatrices.la" || rm -f libmatrices.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making clean in matrixio make[4]: Entering directory '/build/mpb-1.7.0/src/matrixio' rm -rf .libs _libs test -z "libmatrixio.a" || rm -f libmatrixio.a rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making clean in maxwell make[4]: Entering directory '/build/mpb-1.7.0/src/maxwell' rm -rf .libs _libs test -z "libmaxwell.la" || rm -f libmaxwell.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[4]: Entering directory '/build/mpb-1.7.0/src' test -z "libmpb_mpi.la" || rm -f libmpb_mpi.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[4]: Leaving directory '/build/mpb-1.7.0/src' make[3]: Leaving directory '/build/mpb-1.7.0/src' Making clean in tests make[3]: Entering directory '/build/mpb-1.7.0/tests' rm -rf .libs _libs rm -f blastest.out rm -f malloctest blastest eigs_test maxwell_test normal_vectors rm -f *.o rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/tests' Making clean in mpb make[3]: Entering directory '/build/mpb-1.7.0/mpb' rm -f mpb_mpi rm -rf .libs _libs rm -f ctl-io.* main.* geom.* rm -f *.o rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/mpb' Making clean in examples make[3]: Entering directory '/build/mpb-1.7.0/examples' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/examples' Making clean in utils make[3]: Entering directory '/build/mpb-1.7.0/utils' rm -rf .libs _libs rm -f *.o rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Entering directory '/build/mpb-1.7.0' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' echo "Step3: mpi version end" Step3: mpi version end # version with inverse symmetry with mpi echo "Step4: mpi inv version start" Step4: mpi inv version start #XXX dh_auto_configure -- --with-mpi --with-inv-symmetry --build=i686-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --with-mpi --with-inv-symmetry --build=i686-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) i686-pc-linux-gnu checking host system type... (cached) i686-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /bin/sed checking for grep that handles long lines and -e... (cached) /bin/grep checking for egrep... (cached) /bin/grep -E checking for fgrep... (cached) /bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /bin/dd checking how to truncate binary pipes... (cached) /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking how to run the C preprocessor... (cached) mpicc -E checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 *********************** INVERSION SYM. *********************** checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for mpicc... (cached) mpicc checking for MPI_Init... (cached) yes checking for mpi.h... yes checking for fftw_mpi_execute_dft in -lfftw3_mpi... (cached) yes checking for mpirun... (cached) mpirun checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for H5Pset_mpi... (cached) no checking for H5Pset_fapl_mpio... (cached) yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for ANSI C header files... (cached) yes checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build make -j10 make[2]: Entering directory '/build/mpb-1.7.0' make all-recursive make[3]: Entering directory '/build/mpb-1.7.0' Making all in src make[4]: Entering directory '/build/mpb-1.7.0/src' cp -f mpbconf.h mpbi_mpi.h make all-recursive make[5]: Entering directory '/build/mpb-1.7.0/src' Making all in util make[6]: Entering directory '/build/mpb-1.7.0/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/build/mpb-1.7.0/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libutil.a debug_malloc.o mpi_utils.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/build/mpb-1.7.0/src/util' make[6]: Leaving directory '/build/mpb-1.7.0/src/util' Making all in matrices make[6]: Entering directory '/build/mpb-1.7.0/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c -o libmatrices_la-eigensolver.lo `test -f 'eigensolver.c' || echo './'`eigensolver.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c -o libmatrices_la-eigensolver_utils.lo `test -f 'eigensolver_utils.c' || echo './'`eigensolver_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c -o libmatrices_la-linmin.lo `test -f 'linmin.c' || echo './'`linmin.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c -o libmatrices_la-matrices.lo `test -f 'matrices.c' || echo './'`matrices.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c eigensolver_davidson.c -o libmatrices_la-eigensolver_davidson.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c evectmatrix.c -o libmatrices_la-evectmatrix.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c linmin.c -o libmatrices_la-linmin.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c matrices.c -o libmatrices_la-matrices.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o mv -f .deps/libmatrices_la-linmin.Tpo .deps/libmatrices_la-linmin.Plo mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making all in matrixio make[6]: Entering directory '/build/mpb-1.7.0/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function 'matrixio_open_': matrixio.c:405:91: warning: statement with no effect [-Wunused-value] IF_EXCLUSIVE(if (parallel) mpi_begin_critical_section(matrixio_critical_section_tag),0); ^ matrixio.c:56:32: note: in definition of macro 'IF_EXCLUSIVE' # define IF_EXCLUSIVE(yes,no) no ^~ matrixio.c: In function 'matrixio_close': matrixio.c:432:94: warning: statement with no effect [-Wunused-value] IF_EXCLUSIVE(if (id.parallel) mpi_end_critical_section(matrixio_critical_section_tag++),0); ^ matrixio.c:56:32: note: in definition of macro 'IF_EXCLUSIVE' # define IF_EXCLUSIVE(yes,no) no ^~ In file included from matrixio.c:29: matrixio.c: In function 'matrixio_open_dataset': matrixio.c:516:23: warning: comparison of integer expressions of different signedness: 'hsize_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] CHECK(dims_copy[i] == dims[i], ^~ ./../util/check.h:37:12: note: in definition of macro 'CHECK' if (!(condition)) { \ ^~~~~~~~~ matrixio.c: In function 'matrixio_read_real_data': matrixio.c:837:28: warning: comparison of integer expressions of different signedness: 'hsize_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] CHECK(dims_copy[i] == dims[i], ^~ ./../util/check.h:37:12: note: in definition of macro 'CHECK' if (!(condition)) { \ ^~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making all in maxwell make[6]: Entering directory '/build/mpb-1.7.0/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o maxwell_op.c: In function 'project_c2t': maxwell_op.c:51:54: warning: unused variable 'az_i' [-Wunused-variable] real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); ^~~~ maxwell_op.c:51:32: warning: unused variable 'ay_i' [-Wunused-variable] real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); ^~~~ maxwell_op.c:51:10: warning: unused variable 'ax_i' [-Wunused-variable] real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); ^~~~ In file included from maxwell_eps.c:29: maxwell_eps.c: In function 'set_maxwell_dielectric': xyz_loop.h:54:28: warning: unused variable 'n2' [-Wunused-variable] int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ ^~ maxwell_eps.c:421:6: note: in expansion of macro 'LOOP_XYZ' LOOP_XYZ(md) { ^~~~~~~~ maxwell_eps.c:404:27: warning: unused variable 'rank' [-Wunused-variable] int n_other, n_last, rank; ^~~~ maxwell_eps.c:404:19: warning: unused variable 'n_last' [-Wunused-variable] int n_other, n_last, rank; ^~~~~~ maxwell_eps.c:404:10: warning: unused variable 'n_other' [-Wunused-variable] int n_other, n_last, rank; ^~~~~~~ maxwell_eps.c:401:35: warning: unused variable 'local_n3' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ maxwell_eps.c:401:20: warning: unused variable 'local_y_start' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~~~~~~ maxwell_eps.c:401:10: warning: unused variable 'local_n2' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ maxwell_eps.c:395:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k; ^ maxwell_eps.c:395:13: warning: unused variable 'j' [-Wunused-variable] int i, j, k; ^ maxwell_eps.c:395:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k; ^ At top level: maxwell_eps.c:181:12: warning: 'sym_matrix_eq' defined but not used [-Wunused-function] static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) ^~~~~~~~~~~~~ mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cru .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[6]: Entering directory '/build/mpb-1.7.0/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 2:0:1 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o libmpbi_mpi.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpbi_mpi.lax/libutil.a && ar x "/build/mpb-1.7.0/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpbi_mpi.lax/libmatrices.a && ar x "/build/mpb-1.7.0/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpbi_mpi.lax/libmaxwell.a && ar x "/build/mpb-1.7.0/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cru .libs/libmpbi_mpi.a .libs/libmpbi_mpi.lax/libutil.a/debug_malloc.o .libs/libmpbi_mpi.lax/libutil.a/mpi_utils.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libmpbi_mpi.a libtool: link: rm -fr .libs/libmpbi_mpi.lax libtool: link: ( cd ".libs" && rm -f "libmpbi_mpi.la" && ln -s "../libmpbi_mpi.la" "libmpbi_mpi.la" ) make[6]: Leaving directory '/build/mpb-1.7.0/src' make[5]: Leaving directory '/build/mpb-1.7.0/src' make[4]: Leaving directory '/build/mpb-1.7.0/src' Making all in tests make[4]: Entering directory '/build/mpb-1.7.0/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c eigs_test.c: In function 'Aop': eigs_test.c:293:51: warning: unused parameter 'data' [-Wunused-parameter] void Aop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:294:7: warning: unused parameter 'is_current_eigenvector' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:43: warning: unused parameter 'Work' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~~~~~~~~~^~~~ eigs_test.c: In function 'Bop': eigs_test.c:303:51: warning: unused parameter 'data' [-Wunused-parameter] void Bop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:304:7: warning: unused parameter 'is_current_eigenvector' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:43: warning: unused parameter 'Work' [-Wunused-parameter] int is_current_eigenvector, evectmatrix Work) ~~~~~~~~~~~~^~~~ eigs_test.c: In function 'Ainvop': eigs_test.c:313:54: warning: unused parameter 'data' [-Wunused-parameter] void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:314:18: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ eigs_test.c:314:27: warning: unused parameter 'eigenvals' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~^~~~~~~~~ eigs_test.c:314:47: warning: unused parameter 'YtY' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~^~~ eigs_test.c: In function 'Cop_old': eigs_test.c:324:55: warning: unused parameter 'data' [-Wunused-parameter] void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:325:15: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ eigs_test.c:325:24: warning: unused parameter 'eigenvals' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~^~~~~~~~~ eigs_test.c: In function 'Cop': eigs_test.c:349:51: warning: unused parameter 'data' [-Wunused-parameter] void Cop(evectmatrix Xin, evectmatrix Xout, void *data, ~~~~~~^~~~ eigs_test.c:350:16: warning: unused parameter 'Y' [-Wunused-parameter] evectmatrix Y, real *eigenvals, sqmatrix YtY) ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/mpb-1.7.0/tests' Making all in mpb make[4]: Entering directory '/build/mpb-1.7.0/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/build/mpb-1.7.0/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-medium.o -MD -MP -MF .deps/mpbi_mpi-medium.Tpo -c -o mpbi_mpi-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-epsilon_file.o -MD -MP -MF .deps/mpbi_mpi-epsilon_file.Tpo -c -o mpbi_mpi-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-field-smob.o -MD -MP -MF .deps/mpbi_mpi-field-smob.Tpo -c -o mpbi_mpi-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-fields.o -MD -MP -MF .deps/mpbi_mpi-fields.Tpo -c -o mpbi_mpi-fields.o `test -f 'fields.c' || echo './'`fields.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-material_grid.o -MD -MP -MF .deps/mpbi_mpi-material_grid.Tpo -c -o mpbi_mpi-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-material_grid_opt.o -MD -MP -MF .deps/mpbi_mpi-material_grid_opt.Tpo -c -o mpbi_mpi-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-matrix-smob.o -MD -MP -MF .deps/mpbi_mpi-matrix-smob.Tpo -c -o mpbi_mpi-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-mpb.o -MD -MP -MF .deps/mpbi_mpi-mpb.Tpo -c -o mpbi_mpi-mpb.o `test -f 'mpb.c' || echo './'`mpb.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-main.o -MD -MP -MF .deps/mpbi_mpi-main.Tpo -c -o mpbi_mpi-main.o `test -f 'main.c' || echo './'`main.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-geom.o -MD -MP -MF .deps/mpbi_mpi-geom.Tpo -c -o mpbi_mpi-geom.o `test -f 'geom.c' || echo './'`geom.c main.c: In function 'make_name': main.c:140:8: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if (ndir > 5 && !strcmp(".libs", dir+ndir-5)) ^~ main.c:142:4: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' strcpy(base0, for_base); base = basename(base0); ^~~~~~ In file included from ctl-io.h:7, from main.c:37: main.c: In function 'main_entry': main.c:202:32: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] gh_new_procedure ("subplex", (SCM (*)(void)) subplex_scm, 7, 0, 0); ^ main.c:212:7: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] (SCM (*)(void)) adaptive_integration_scm, 6, 0, 0); ^ main.c:216:7: warning: cast between incompatible function types from 'struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)' to 'struct scm_unused_struct * (*)(void)' [-Wcast-function-type] (SCM (*)(void)) cadaptive_integration_scm, 6, 0, 0); ^ field-smob.c: In function 'integrate_fieldL': field-smob.c:407:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ field-smob.c:407:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ field-smob.c:407:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ geom.c: In function 'overlap_integrand': geom.c:1246:13: warning: unused variable 's' [-Wunused-variable] double s[2]; ^ material_grid_opt.c: In function 'material_grids_min_tetm_gap': material_grid_opt.c:90:43: warning: unused parameter 'func_tol' [-Wunused-parameter] number func_tol, number eps_tol, ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter 'maxeval' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter 'maxtime' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~^~~~~~~ material_grid.c: In function 'material_grids_addgradient': material_grid.c:392:35: warning: unused variable 'local_n3' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ material_grid.c:392:20: warning: unused variable 'local_y_start' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~~~~~~ material_grid.c:392:10: warning: unused variable 'local_n2' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ material_grid.c:390:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ material_grid.c:390:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ material_grid.c:390:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ material_grid.c:390:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ material_grid_opt.c: In function 'material_grids_maxmin_gap': material_grid_opt.c:258:13: warning: unused parameter 'func_tol' [-Wunused-parameter] number func_tol, number eps_tol, ~~~~~~~^~~~~~~~ material_grid_opt.c:259:14: warning: unused parameter 'maxeval' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~~^~~~~~~ material_grid_opt.c:259:30: warning: unused parameter 'maxtime' [-Wunused-parameter] integer maxeval, number maxtime) ~~~~~~~^~~~~~~ geom.c: In function 'point_in_or_on_prism': geom.c:2250:10: warning: unused variable 'height' [-Wunused-variable] double height = prsm->height; ^~~~~~ geom.c: In function 'dcmp': geom.c:2275:15: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] { double d1=*((double *)pd1), d2=*((double *)pd2); ^ material_grid.c: In function 'print_material_grids_deps_du_numeric': material_grid.c:634:14: warning: unused variable 'foo' [-Wunused-variable] double *foo; ^~~ geom.c:2275:36: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] { double d1=*((double *)pd1), d2=*((double *)pd2); ^ material_grid.c: In function 'match_eps_func': material_grid.c:816:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ material_grid.c:816:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ material_grid.c:816:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ geom.c: In function 'triangle_normal': geom.c:2551:10: warning: unused variable 'nvnorm' [-Wunused-variable] double nvnorm=vector3_norm(nv); ^~~~~~ geom.c: In function 'point_in_fixed_pobjectp': geom.c:299:5: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:322:3: note: here case GEOM PRISM: ^~~~ geom.c: In function 'normal_to_fixed_object': geom.c:454:5: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:483:3: note: here case GEOM PRISM: ^~~~ At top level: material_grid.c:807:15: warning: 'match_eps_func' defined but not used [-Wunused-function] static double match_eps_func(int n, const double *u, double *grad, void *data) ^~~~~~~~~~~~~~ geom.c: In function 'intersect_line_with_object': geom.c:841:3: warning: this statement may fall through [-Wimplicit-fallthrough=] { ^ geom.c:912:3: note: here default: ^~~~~~~ fields.c: In function 'fix_field_phase': fields.c:444:13: warning: unused variable 'theta' [-Wunused-variable] double theta; ^~~~~ fields.c:442:31: warning: unused variable 'sq_sum' [-Wunused-variable] real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; ^~~~~~ fields.c:442:11: warning: unused variable 'sq_sum2' [-Wunused-variable] real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; ^~~~~~~ fields.c: In function 'get_val': fields.c:579:1: warning: no return statement in function returning non-void [-Wreturn-type] } ^ fields.c:552:13: warning: unused parameter 'data' [-Wunused-parameter] real *data, int stride, int conjugate) ~~~~~~^~~~ fields.c:552:23: warning: unused parameter 'stride' [-Wunused-parameter] real *data, int stride, int conjugate) ~~~~^~~~~~ fields.c: In function 'output_field_to_file': fields.c:1229:10: warning: implicit declaration of function 'get_epsilon_tensor'; did you mean 'get_epsilon_aux'? [-Wimplicit-function-declaration] get_epsilon_tensor(c1,c2, 0, inv); ^~~~~~~~~~~~~~~~~~ get_epsilon_aux In file included from fields.c:30: fields.c: In function 'compute_energy_in_object_list': ../src/maxwell/xyz_loop.h:54:28: warning: unused variable 'n2' [-Wunused-variable] int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ ^~ fields.c:1316:6: note: in expansion of macro 'LOOP_XYZ' LOOP_XYZ(mdata) { ^~~~~~~~ fields.c:1289:35: warning: unused variable 'local_n3' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ fields.c:1289:20: warning: unused variable 'local_y_start' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~~~~~~ fields.c:1289:10: warning: unused variable 'local_n2' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ fields.c:1287:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ fields.c:1287:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ fields.c:1287:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ fields.c: In function 'compute_field_integral': fields.c:1358:35: warning: unused variable 'local_n3' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ fields.c:1358:20: warning: unused variable 'local_y_start' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~~~~~~ fields.c:1358:10: warning: unused variable 'local_n2' [-Wunused-variable] int local_n2, local_y_start, local_n3; ^~~~~~~~ fields.c:1356:48: warning: variable 'rank' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~ fields.c:1356:40: warning: variable 'n_last' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~ fields.c:1356:31: warning: variable 'n_other' set but not used [-Wunused-but-set-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^~~~~~~ fields.c:1356:10: warning: unused variable 'i' [-Wunused-variable] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ mv -f .deps/mpbi_mpi-main.Tpo .deps/mpbi_mpi-main.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -pthread -I/usr/include/guile/2.2 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.7.0, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-ctl-io.o -MD -MP -MF .deps/mpbi_mpi-ctl-io.Tpo -c -o mpbi_mpi-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c mv -f .deps/mpbi_mpi-epsilon_file.Tpo .deps/mpbi_mpi-epsilon_file.Po In file included from medium.c:76: mu.c: In function 'mean_mu_func': mu.c:271:13: warning: 'shiftby1' may be used uninitialized in this function [-Wmaybe-uninitialized] shiftby2 = shiftby1; ~~~~~~~~~^~~~~~~~~~ ctl-io.c: In function 'block_equal': ctl-io.c:513:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'cylinder_equal': ctl-io.c:553:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'geometric_object_equal': ctl-io.c:590:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'material_type_equal': ctl-io.c:650:6: warning: suggest braces around empty body in an 'else' statement [-Wempty-body] else ; ^ ctl-io.c: In function 'lattice_destroy': ctl-io.c:656:30: warning: unused parameter 'o' [-Wunused-parameter] void lattice_destroy(lattice o) ~~~~~~~~^ ctl-io.c: In function 'ellipsoid_destroy': ctl-io.c:660:34: warning: unused parameter 'o' [-Wunused-parameter] void ellipsoid_destroy(ellipsoid o) ~~~~~~~~~~^ ctl-io.c: In function 'sphere_destroy': ctl-io.c:689:28: warning: unused parameter 'o' [-Wunused-parameter] void sphere_destroy(sphere o) ~~~~~~~^ ctl-io.c: In function 'wedge_destroy': ctl-io.c:693:26: warning: unused parameter 'o' [-Wunused-parameter] void wedge_destroy(wedge o) ~~~~~~^ ctl-io.c: In function 'cone_destroy': ctl-io.c:697:24: warning: unused parameter 'o' [-Wunused-parameter] void cone_destroy(cone o) ~~~~~^ ctl-io.c: In function 'material_grid_destroy': ctl-io.c:751:42: warning: unused parameter 'o' [-Wunused-parameter] void material_grid_destroy(material_grid o) ~~~~~~~~~~~~~~^ ctl-io.c: In function 'material_function_destroy': ctl-io.c:755:50: warning: unused parameter 'o' [-Wunused-parameter] void material_function_destroy(material_function o) ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function 'medium_anisotropic_destroy': ctl-io.c:759:52: warning: unused parameter 'o' [-Wunused-parameter] void medium_anisotropic_destroy(medium_anisotropic o) ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function 'medium_destroy': ctl-io.c:763:28: warning: unused parameter 'o' [-Wunused-parameter] void medium_destroy(medium o) ~~~~~~~^ material_grid.c: In function 'material_grids_addgradient': material_grid.c:390:13: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ material_grid.c:390:16: warning: 'k' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ mv -f .deps/mpbi_mpi-material_grid_opt.Tpo .deps/mpbi_mpi-material_grid_opt.Po In file included from medium.c:75: epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:13: warning: 'shiftby1' may be used uninitialized in this function [-Wmaybe-uninitialized] shiftby2 = shiftby1; ~~~~~~~~~^~~~~~~~~~ mv -f .deps/mpbi_mpi-matrix-smob.Tpo .deps/mpbi_mpi-matrix-smob.Po mv -f .deps/mpbi_mpi-field-smob.Tpo .deps/mpbi_mpi-field-smob.Po mv -f .deps/mpbi_mpi-mpb.Tpo .deps/mpbi_mpi-mpb.Po fields.c: In function 'compute_energy_in_object_list': fields.c:1287:13: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c:1287:16: warning: 'k' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ mv -f .deps/mpbi_mpi-material_grid.Tpo .deps/mpbi_mpi-material_grid.Po fields.c: In function 'compute_field_integral': fields.c:1356:13: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ fields.c:1356:16: warning: 'k' may be used uninitialized in this function [-Wmaybe-uninitialized] int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; ^ mv -f .deps/mpbi_mpi-medium.Tpo .deps/mpbi_mpi-medium.Po mv -f .deps/mpbi_mpi-fields.Tpo .deps/mpbi_mpi-fields.Po mv -f .deps/mpbi_mpi-ctl-io.Tpo .deps/mpbi_mpi-ctl-io.Po mv -f .deps/mpbi_mpi-geom.Tpo .deps/mpbi_mpi-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpbi_mpi mpbi_mpi-medium.o mpbi_mpi-epsilon_file.o mpbi_mpi-field-smob.o mpbi_mpi-fields.o mpbi_mpi-material_grid.o mpbi_mpi-material_grid_opt.o mpbi_mpi-matrix-smob.o mpbi_mpi-mpb.o mpbi_mpi-main.o mpbi_mpi-geom.o mpbi_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpbi_mpi.la -lctl -lguile-2.2 -lgc -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/build/mpb-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/i386-linux-gnu/hdf5/openmpi -o mpbi_mpi mpbi_mpi-medium.o mpbi_mpi-epsilon_file.o mpbi_mpi-field-smob.o mpbi_mpi-fields.o mpbi_mpi-material_grid.o mpbi_mpi-material_grid_opt.o mpbi_mpi-matrix-smob.o mpbi_mpi-mpb.o mpbi_mpi-main.o mpbi_mpi-geom.o mpbi_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -L/usr/lib/i386-linux-gnu/hdf5/openmpi -lctl -lguile-2.2 -lgc -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[5]: Leaving directory '/build/mpb-1.7.0/mpb' make[4]: Leaving directory '/build/mpb-1.7.0/mpb' Making all in examples make[4]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/mpb-1.7.0/examples' Making all in utils make[4]: Entering directory '/build/mpb-1.7.0/utils' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/mpb-1.7.0/utils' make[4]: Entering directory '/build/mpb-1.7.0' make[4]: Leaving directory '/build/mpb-1.7.0' make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' echo "Step4: mpi inv version end" Step4: mpi inv version end make install prefix=/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr make[2]: Entering directory '/build/mpb-1.7.0' Making install in src make[3]: Entering directory '/build/mpb-1.7.0/src' make install-recursive make[4]: Entering directory '/build/mpb-1.7.0/src' Making install in util make[5]: Entering directory '/build/mpb-1.7.0/src/util' make install-am make[6]: Entering directory '/build/mpb-1.7.0/src/util' make[7]: Entering directory '/build/mpb-1.7.0/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/mpb-1.7.0/src/util' make[6]: Leaving directory '/build/mpb-1.7.0/src/util' make[5]: Leaving directory '/build/mpb-1.7.0/src/util' Making install in matrices make[5]: Entering directory '/build/mpb-1.7.0/src/matrices' make[6]: Entering directory '/build/mpb-1.7.0/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/matrices' make[5]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making install in matrixio make[5]: Entering directory '/build/mpb-1.7.0/src/matrixio' make[6]: Entering directory '/build/mpb-1.7.0/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/matrixio' make[5]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making install in maxwell make[5]: Entering directory '/build/mpb-1.7.0/src/maxwell' make[6]: Entering directory '/build/mpb-1.7.0/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[5]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[5]: Entering directory '/build/mpb-1.7.0/src' make[6]: Entering directory '/build/mpb-1.7.0/src' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpbi_mpi.la '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.lai /build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.la libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.a /build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a libtool: install: chmod 644 /build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a libtool: install: ranlib /build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/include' /usr/bin/install -c -m 644 mpbi_mpi.h '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/include' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/include/mpb' make[6]: Leaving directory '/build/mpb-1.7.0/src' make[5]: Leaving directory '/build/mpb-1.7.0/src' make[4]: Leaving directory '/build/mpb-1.7.0/src' make[3]: Leaving directory '/build/mpb-1.7.0/src' Making install in tests make[3]: Entering directory '/build/mpb-1.7.0/tests' make[4]: Entering directory '/build/mpb-1.7.0/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0/tests' make[3]: Leaving directory '/build/mpb-1.7.0/tests' Making install in mpb make[3]: Entering directory '/build/mpb-1.7.0/mpb' make install-am make[4]: Entering directory '/build/mpb-1.7.0/mpb' make[5]: Entering directory '/build/mpb-1.7.0/mpb' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi_mpi '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/bin/./mpbi-mpi' libtool: install: /usr/bin/install -c mpbi_mpi /build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/bin/./mpbi-mpi /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/man/man1' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/mpb' make[5]: Leaving directory '/build/mpb-1.7.0/mpb' make[4]: Leaving directory '/build/mpb-1.7.0/mpb' make[3]: Leaving directory '/build/mpb-1.7.0/mpb' Making install in examples make[3]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0/examples' make[3]: Leaving directory '/build/mpb-1.7.0/examples' Making install in utils make[3]: Entering directory '/build/mpb-1.7.0/utils' make[4]: Entering directory '/build/mpb-1.7.0/utils' /bin/mkdir -p '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/build/mpb-1.7.0/debian/build-tmp/mpb-mpi/usr/share/man/man1' make[4]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Entering directory '/build/mpb-1.7.0' make[4]: Entering directory '/build/mpb-1.7.0' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0' make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' #make clean <- still needed in dh_auto_install # clear depdenncy_libs in *.la sed -i "/dependency_libs/ s/'.*'/''/" `find /build/mpb-1.7.0/debian/build-tmp/* -name '*.la'` # create mpbi-data.1 cp /build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/man/man1/mpb-data.1 /build/mpb-1.7.0/debian/build-tmp/mpb/usr/share/man/man1/mpbi-data.1 make[1]: Leaving directory '/build/mpb-1.7.0' debian/rules override_dh_auto_test make[1]: Entering directory '/build/mpb-1.7.0' # tests are done during build, so nothing to do here make[1]: Leaving directory '/build/mpb-1.7.0' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with autoreconf dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/mpb-1.7.0' # last build is for inv + mpi dh_auto_install make -j1 install DESTDIR=/build/mpb-1.7.0/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/mpb-1.7.0' Making install in src make[3]: Entering directory '/build/mpb-1.7.0/src' make install-recursive make[4]: Entering directory '/build/mpb-1.7.0/src' Making install in util make[5]: Entering directory '/build/mpb-1.7.0/src/util' make install-am make[6]: Entering directory '/build/mpb-1.7.0/src/util' make[7]: Entering directory '/build/mpb-1.7.0/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/mpb-1.7.0/src/util' make[6]: Leaving directory '/build/mpb-1.7.0/src/util' make[5]: Leaving directory '/build/mpb-1.7.0/src/util' Making install in matrices make[5]: Entering directory '/build/mpb-1.7.0/src/matrices' make[6]: Entering directory '/build/mpb-1.7.0/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/matrices' make[5]: Leaving directory '/build/mpb-1.7.0/src/matrices' Making install in matrixio make[5]: Entering directory '/build/mpb-1.7.0/src/matrixio' make[6]: Entering directory '/build/mpb-1.7.0/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/matrixio' make[5]: Leaving directory '/build/mpb-1.7.0/src/matrixio' Making install in maxwell make[5]: Entering directory '/build/mpb-1.7.0/src/maxwell' make[6]: Entering directory '/build/mpb-1.7.0/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[5]: Leaving directory '/build/mpb-1.7.0/src/maxwell' make[5]: Entering directory '/build/mpb-1.7.0/src' make[6]: Entering directory '/build/mpb-1.7.0/src' /bin/mkdir -p '/build/mpb-1.7.0/debian/tmp/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpbi_mpi.la '/build/mpb-1.7.0/debian/tmp/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.lai /build/mpb-1.7.0/debian/tmp/usr/lib/libmpbi_mpi.la libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.a /build/mpb-1.7.0/debian/tmp/usr/lib/libmpbi_mpi.a libtool: install: chmod 644 /build/mpb-1.7.0/debian/tmp/usr/lib/libmpbi_mpi.a libtool: install: ranlib /build/mpb-1.7.0/debian/tmp/usr/lib/libmpbi_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /bin/mkdir -p '/build/mpb-1.7.0/debian/tmp/usr/include' /usr/bin/install -c -m 644 mpbi_mpi.h '/build/mpb-1.7.0/debian/tmp/usr/include' /bin/mkdir -p '/build/mpb-1.7.0/debian/tmp/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h '/build/mpb-1.7.0/debian/tmp/usr/include/mpb' make[6]: Leaving directory '/build/mpb-1.7.0/src' make[5]: Leaving directory '/build/mpb-1.7.0/src' make[4]: Leaving directory '/build/mpb-1.7.0/src' make[3]: Leaving directory '/build/mpb-1.7.0/src' Making install in tests make[3]: Entering directory '/build/mpb-1.7.0/tests' make[4]: Entering directory '/build/mpb-1.7.0/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0/tests' make[3]: Leaving directory '/build/mpb-1.7.0/tests' Making install in mpb make[3]: Entering directory '/build/mpb-1.7.0/mpb' make install-am make[4]: Entering directory '/build/mpb-1.7.0/mpb' make[5]: Entering directory '/build/mpb-1.7.0/mpb' /bin/mkdir -p '/build/mpb-1.7.0/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi_mpi '/build/mpb-1.7.0/debian/tmp/usr/bin/./mpbi-mpi' libtool: install: /usr/bin/install -c mpbi_mpi /build/mpb-1.7.0/debian/tmp/usr/bin/./mpbi-mpi /bin/mkdir -p '/build/mpb-1.7.0/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/build/mpb-1.7.0/debian/tmp/usr/share/man/man1' /bin/mkdir -p '/build/mpb-1.7.0/debian/tmp/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/build/mpb-1.7.0/debian/tmp/usr/share/mpb' make[5]: Leaving directory '/build/mpb-1.7.0/mpb' make[4]: Leaving directory '/build/mpb-1.7.0/mpb' make[3]: Leaving directory '/build/mpb-1.7.0/mpb' Making install in examples make[3]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Entering directory '/build/mpb-1.7.0/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0/examples' make[3]: Leaving directory '/build/mpb-1.7.0/examples' Making install in utils make[3]: Entering directory '/build/mpb-1.7.0/utils' make[4]: Entering directory '/build/mpb-1.7.0/utils' /bin/mkdir -p '/build/mpb-1.7.0/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/build/mpb-1.7.0/debian/tmp/usr/share/man/man1' make[4]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Leaving directory '/build/mpb-1.7.0/utils' make[3]: Entering directory '/build/mpb-1.7.0' make[4]: Entering directory '/build/mpb-1.7.0' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/mpb-1.7.0' make[3]: Leaving directory '/build/mpb-1.7.0' make[2]: Leaving directory '/build/mpb-1.7.0' rm -f config.cache ../config.cache make[1]: Leaving directory '/build/mpb-1.7.0' dh_install debian/rules override_dh_installdocs make[1]: Entering directory '/build/mpb-1.7.0' dh_installdocs rm -rf debian/mpb-doc/usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/license make[1]: Leaving directory '/build/mpb-1.7.0' dh_installchangelogs dh_installexamples dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb-mpi/usr/bin/mpbi-mpi debian/mpb-mpi/usr/bin/mpb-mpi were not linked against libpthread.so.0 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb-mpi/usr/bin/mpbi-mpi debian/mpb-mpi/usr/bin/mpb-mpi were not linked against libz.so.1 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb-mpi/usr/bin/mpbi-mpi debian/mpb-mpi/usr/bin/mpb-mpi were not linked against libgc.so.1 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb-mpi/usr/bin/mpbi-mpi debian/mpb-mpi/usr/bin/mpb-mpi were not linked against libgfortran.so.5 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb-mpi/usr/bin/mpbi-mpi debian/mpb-mpi/usr/bin/mpb-mpi were not linked against libquadmath.so.0 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb/usr/bin/mpb-data debian/mpb/usr/bin/mpbi debian/mpb/usr/bin/mpb debian/mpb/usr/bin/mpbi-data were not linked against libgfortran.so.5 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb/usr/bin/mpbi debian/mpb/usr/bin/mpb were not linked against libgc.so.1 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb/usr/bin/mpb-data debian/mpb/usr/bin/mpbi debian/mpb/usr/bin/mpb debian/mpb/usr/bin/mpbi-data were not linked against libmpi.so.40 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb/usr/bin/mpb-data debian/mpb/usr/bin/mpbi debian/mpb/usr/bin/mpb debian/mpb/usr/bin/mpbi-data were not linked against libpthread.so.0 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb/usr/bin/mpb-data debian/mpb/usr/bin/mpbi debian/mpb/usr/bin/mpb debian/mpb/usr/bin/mpbi-data were not linked against libquadmath.so.0 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mpb/usr/bin/mpb-data debian/mpb/usr/bin/mpbi debian/mpb/usr/bin/mpb debian/mpb/usr/bin/mpbi-data were not linked against libz.so.1 (they use none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'mpb-dbgsym' in '../mpb-dbgsym_1.7.0-5_i386.deb'. dpkg-deb: building package 'mpb-doc' in '../mpb-doc_1.7.0-5_all.deb'. dpkg-deb: building package 'mpb-mpi-dbgsym' in '../mpb-mpi-dbgsym_1.7.0-5_i386.deb'. dpkg-deb: building package 'mpb' in '../mpb_1.7.0-5_i386.deb'. dpkg-deb: building package 'mpb-scm' in '../mpb-scm_1.7.0-5_all.deb'. dpkg-deb: building package 'mpb-dev' in '../mpb-dev_1.7.0-5_i386.deb'. dpkg-deb: building package 'mpb-mpi' in '../mpb-mpi_1.7.0-5_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../mpb_1.7.0-5_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/13016 and its subdirectories I: Current time: Mon Aug 10 03:18:38 -12 2020 I: pbuilder-time-stamp: 1597072718 Mon Aug 10 15:18:39 UTC 2020 I: 1st build successful. Starting 2nd build on remote node profitbricks-build16-i386.debian.net. Mon Aug 10 15:18:39 UTC 2020 I: Preparing to do remote build '2' on profitbricks-build16-i386.debian.net. Mon Aug 10 15:20:07 UTC 2020 I: Deleting $TMPDIR on profitbricks-build16-i386.debian.net. Mon Aug 10 15:20:08 UTC 2020 I: mpb_1.7.0-5_i386.changes: Format: 1.8 Date: Fri, 01 Feb 2019 19:32:14 +0100 Source: mpb Binary: mpb mpb-dbgsym mpb-dev mpb-doc mpb-mpi mpb-mpi-dbgsym mpb-scm Architecture: i386 all Version: 1.7.0-5 Distribution: sid Urgency: medium Maintainer: Thorsten Alteholz Changed-By: Thorsten Alteholz Description: mpb - MIT Photonic-Bands mpb-dev - MIT Photonic-Bands development files mpb-doc - MIT Photonic-Bands documentation mpb-mpi - MIT Photonic-Bands, parallel (mpich) version mpb-scm - MIT Photonic-Bands initialisation files Changes: mpb (1.7.0-5) sid; urgency=medium . * debian/control: update Homepage: * debian/control: bump Standards Version to 4.3.0 (no changes) * debian/copyright: update Upstream-Source: * add patch to avoid zdotc on mipsel Checksums-Sha1: 8d25129b8b9e54bea54e8733481b000a722cf61d 640576 mpb-dbgsym_1.7.0-5_i386.deb e996f0a83b52826e3d8ebeb35a47c539726f99c1 10892 mpb-dev_1.7.0-5_i386.deb 0f846188421802de1a930bbc56fed9ae6642b893 844268 mpb-doc_1.7.0-5_all.deb 1d53015047be700c85e5296be5e018a065e8877a 610544 mpb-mpi-dbgsym_1.7.0-5_i386.deb 14fa9878ad59b2546d34eb279b0828febd8a5c73 197360 mpb-mpi_1.7.0-5_i386.deb 1395a47b1a27558b66d51aa77558a5a1cf80423a 14876 mpb-scm_1.7.0-5_all.deb 38c55082dd6d6e5b309387879e5fd412b156312a 8309 mpb_1.7.0-5_i386.buildinfo f09cb0a1c50347d08c6ee9cb5f81530f823725ae 221096 mpb_1.7.0-5_i386.deb Checksums-Sha256: 34209401e3baf02ba9b240833f9439869b79504e336dc5844cd301b46925ac90 640576 mpb-dbgsym_1.7.0-5_i386.deb c9fad8e686de055997856da1b968ca94ecc7874c67efbfbf3286c1fb6d6b075c 10892 mpb-dev_1.7.0-5_i386.deb a851a5b64546ba79101e451803f29b32de41fa1a1b9d9c6a85526f27b2fa3e76 844268 mpb-doc_1.7.0-5_all.deb c1f32b7ea364286d55c86eaee7fe1ddbfe9215cd9a5532809db6ff1ba856f99d 610544 mpb-mpi-dbgsym_1.7.0-5_i386.deb 95ddac85c5ee010239f1f13e966fcd8e10a4982d24375f8a93c444a74253c09e 197360 mpb-mpi_1.7.0-5_i386.deb 9f4bb7ca0bfe8ebf35a400ba26505c5cc835cba77ddc3ebea797fb181e8934cc 14876 mpb-scm_1.7.0-5_all.deb ba275e245338a31e78fc454359d56aeb82f5cf5ab8ab24291e9e9ba9630e52b1 8309 mpb_1.7.0-5_i386.buildinfo 256f5b5fcb8c28f890063e6436b37092bac7c5b46f84b5daf94c5263e6393f69 221096 mpb_1.7.0-5_i386.deb Files: 03d53d8a5ae6699f7847dbbe670b9957 640576 debug optional mpb-dbgsym_1.7.0-5_i386.deb b110c9566cd15b3e0ad38df350b10139 10892 devel optional mpb-dev_1.7.0-5_i386.deb 8247caec2d6ac1bfb16e6a7ee434ab64 844268 doc optional mpb-doc_1.7.0-5_all.deb 104ba26e7fa8713160e4fa7799e46b36 610544 debug optional mpb-mpi-dbgsym_1.7.0-5_i386.deb 2c1e4e8db23206bc93c7e271f6c8a823 197360 science optional mpb-mpi_1.7.0-5_i386.deb 9b3a91803564e91f3ba9eff3e01296d3 14876 science optional mpb-scm_1.7.0-5_all.deb 69b42997dc97b6150b105a70d27f5383 8309 science optional mpb_1.7.0-5_i386.buildinfo 5b9362b133604e392dbd28c733d926f1 221096 science optional mpb_1.7.0-5_i386.deb Mon Aug 10 15:20:09 UTC 2020 I: diffoscope 155 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.W3XrxW4l99/mpb_1.7.0-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.W3XrxW4l99/mpb_1.7.0-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.W3XrxW4l99/mpb_1.7.0-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.W3XrxW4l99/b1/mpb_1.7.0-5_i386.changes /srv/reproducible-results/rbuild-debian/tmp.W3XrxW4l99/b2/mpb_1.7.0-5_i386.changes ## close_archive (total time: 0.000s) 0.000s 2 calls diffoscope.comparators.xz.XzContainer 0.000s 2 calls diffoscope.comparators.tar.TarContainer ## command (total time: 0.727s) 0.415s 34 calls diff 0.228s 6 calls xz 0.068s 8 calls cmp 0.016s 2 calls gzip 0.001s 11 calls cmp (internal) ## compare_files (cumulative) (total time: 3.616s) 1.202s 1 call abc.DotChangesFile 0.894s 1 call abc.DebFile 0.776s 2 calls abc.XzFile 0.404s 1 call abc.DebDataTarFile 0.166s 1 call abc.GzipFile 0.090s 1 call abc.TarFile 0.072s 1 call abc.TextFile 0.013s 1 call abc.Md5sumsFile ## container_extract (total time: 0.294s) 0.229s 6 calls diffoscope.comparators.xz.XzContainer 0.035s 154 calls diffoscope.comparators.deb.DebTarContainer 0.016s 2 calls diffoscope.comparators.gzip.GzipContainer 0.011s 8 calls diffoscope.comparators.deb.DebContainer 0.003s 6 calls diffoscope.comparators.tar.TarContainer ## has_same_content_as (total time: 0.073s) 0.047s 7 calls abc.DebFile 0.010s 3 calls abc.TextFile 0.008s 1 call abc.DebDataTarFile 0.007s 2 calls abc.XzFile 0.000s 1 call diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 2 calls abc.Md5sumsFile 0.000s 1 call abc.DotChangesFile 0.000s 1 call abc.GzipFile 0.000s 1 call abc.TarFile ## main (total time: 1.534s) 1.520s 2 calls outputs 0.013s 1 call cleanup ## open_archive (total time: 0.000s) 0.000s 6 calls diffoscope.comparators.xz.XzContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer 0.000s 2 calls diffoscope.comparators.deb.DebTarContainer 0.000s 2 calls diffoscope.comparators.deb.DebContainer 0.000s 2 calls diffoscope.comparators.gzip.GzipContainer ## output (total time: 0.049s) 0.046s 1 call html 0.002s 1 call text 0.000s 1 call json ## recognizes (total time: 0.293s) 0.110s 496 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.083s 262 calls diffoscope.comparators.utils.archive.ArchiveMember 0.055s 10 calls diffoscope.comparators.binary.FilesystemFile 0.044s 294 calls diffoscope.comparators.debian.DebControlMember 0.000s 8 calls abc.DotChangesFile 0.000s 14 calls abc.Md5sumsFile 0.000s 4 calls diffoscope.comparators.utils.libarchive.LibarchiveSymlink Mon Aug 10 15:20:13 UTC 2020 E: mpb failed to build reproducibly in buster on i386. Mon Aug 10 15:20:14 UTC 2020 I: Submitting .buildinfo files to external archives: Mon Aug 10 15:20:14 UTC 2020 I: Submitting 12K b1/mpb_1.7.0-5_i386.buildinfo.asc Mon Aug 10 15:20:16 UTC 2020 I: Submitting 12K b2/mpb_1.7.0-5_i386.buildinfo.asc Mon Aug 10 15:20:17 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Aug 10 15:20:17 UTC 2020 I: Done submitting .buildinfo files. Mon Aug 10 15:20:17 UTC 2020 I: Removing signed mpb_1.7.0-5_i386.buildinfo.asc files: removed './b1/mpb_1.7.0-5_i386.buildinfo.asc' removed './b2/mpb_1.7.0-5_i386.buildinfo.asc'