Fri Aug 29 22:52:33 UTC 2025 I: starting to build fastq-pair/forky/amd64 on jenkins on '2025-08-29 22:52' Fri Aug 29 22:52:33 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_3/66799/console.log Fri Aug 29 22:52:33 UTC 2025 I: Downloading source for forky/fastq-pair=1.0-3 --2025-08-29 22:52:33-- http://deb.debian.org/debian/pool/main/f/fastq-pair/fastq-pair_1.0-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1979 (1.9K) [text/prs.lines.tag] Saving to: ‘fastq-pair_1.0-3.dsc’ 0K . 100% 204M=0s 2025-08-29 22:52:33 (204 MB/s) - ‘fastq-pair_1.0-3.dsc’ saved [1979/1979] Fri Aug 29 22:52:33 UTC 2025 I: fastq-pair_1.0-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: fastq-pair Binary: fastq-pair Architecture: any Version: 1.0-3 Maintainer: Debian Med Packaging Team Uploaders: Nilesh Patra Homepage: https://github.com/linsalrob/fastq-pair Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/fastq-pair Vcs-Git: https://salsa.debian.org/med-team/fastq-pair.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake Package-List: fastq-pair deb science optional arch=any Checksums-Sha1: 08243568fa16824f930d1a76b1cb88f26916bbeb 217101 fastq-pair_1.0.orig.tar.gz cf7b80ed5e4c6e4e3acc389cebeaf423a86501c7 3368 fastq-pair_1.0-3.debian.tar.xz Checksums-Sha256: 74fd5bae4d85cc02245ff1b03f31fa3788c50966d829b107076a806ae061da3b 217101 fastq-pair_1.0.orig.tar.gz b2914aeb055240278cc9d81b65123db7ccb814ad45179eb1ca66ea1c6cfacf58 3368 fastq-pair_1.0-3.debian.tar.xz Files: 57de13c5e683c07e75875152078fda5c 217101 fastq-pair_1.0.orig.tar.gz e11b1678dc84591876606a3c72c02e94 3368 fastq-pair_1.0-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmOPktoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtF6JQ//YN34g3YlGlSMxi9nBaJ7NDr9Bonvzztm mvCmlWjOWx22VKppFSrBwgh2HfNhXjERUX2+EtnitI52C9oUCcpaXIBhs0L3IOrq YmIBAupfb5yfh79rQXHE6hxokJwsRGTwqXzXK+F2l8CID7XED+rjbzDibo3yveYJ NjBiWYBZkpR13apg7rvUE1wUhVUKKC+yzBuJRO2FcDFNrdcArNSppY+ZoZdlaVJm g20HBh37sm5emJgCbCQt0YVeNLDA5ByDm8uTCod0xmBhRdhizKIwarOpRXXxvW+e +eJYNrlW7lwvtSLWphIouIj+COxReET7XP3J10MNikIKyUtUeDZIQxfOeJCIPMGV RRQnPaZjZsbJXLqrt7NT7QhiI/GtI4a1OsoCAmDOoiYuYqI8E29PKjxQgouFWh2C AuTCrZiYYxeGU0o7aBU/5EZ/Ek/B95dOSHyhy8NVItVidwz4v3u2prznPEkE5n6b l3qZDuoHnn64fJ/lixlVQgs+JFtxPLGPh/T1oWc5Xpr+fiaemgrdaYLPUCSfN0Po 2j1dJV+7x2b8y9KOZLKTcuE7wE0MJfW3X+brOzXcUCG9SldL/8N+L1sK/wY/wGWq 8sC2BTohRC8kbQfZ8vTeyqZKcYzGBLUMMSyopNBY85vuO1yNkdkH3x2tgywVZ7st XyNtma26Y1E= =4QL0 -----END PGP SIGNATURE----- Fri Aug 29 22:52:33 UTC 2025 I: Checking whether the package is not for us Fri Aug 29 22:52:33 UTC 2025 I: Starting 1st build on remote node ionos1-amd64.debian.net. Fri Aug 29 22:52:33 UTC 2025 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Fri Aug 29 22:54:12 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Aug 29 10:52:37 -12 2025 I: pbuilder-time-stamp: 1756507957 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [fastq-pair_1.0-3.dsc] I: copying [./fastq-pair_1.0.orig.tar.gz] I: copying [./fastq-pair_1.0-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./fastq-pair_1.0-3.dsc: no acceptable signature found dpkg-source: info: extracting fastq-pair in fastq-pair-1.0 dpkg-source: info: unpacking fastq-pair_1.0.orig.tar.gz dpkg-source: info: unpacking fastq-pair_1.0-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/293174/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='7577a6fb4e2540238fb4b014df49edfd' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='293174' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.q6Vuuo9D/pbuilderrc_485T --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.q6Vuuo9D/b1 --logfile b1/build.log fastq-pair_1.0-3.dsc' SUDO_GID='110' SUDO_HOME='/var/lib/jenkins' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.12.41+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.41-1 (2025-08-12) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/293174/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19855 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 59 newly installed, 0 to remove and 0 not upgraded. Need to get 31.4 MB of archives. After unpacking 114 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.7.1-2 [108 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libproc2-0 amd64 2:4.0.4-9 [65.6 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 procps amd64 2:4.0.4-9 [882 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.1-1 [94.7 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.19-8 [294 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 automake all 1:1.17-4 [862 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 cmake-data all 3.31.6-2 [2268 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.2 [638 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 libarchive13t64 amd64 3.7.4-4+b1 [349 kB] Get: 22 http://deb.debian.org/debian forky/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 libkrb5support0 amd64 1.21.3-5 [33.0 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libcom-err2 amd64 1.47.2-3+b3 [25.0 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 libk5crypto3 amd64 1.21.3-5 [81.5 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 libkeyutils1 amd64 1.6.3-6 [9456 B] Get: 27 http://deb.debian.org/debian forky/main amd64 libkrb5-3 amd64 1.21.3-5 [326 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 libgssapi-krb5-2 amd64 1.21.3-5 [138 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 30 http://deb.debian.org/debian forky/main amd64 libidn2-0 amd64 2.3.8-4 [110 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-9 [19.8 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-9 [57.5 kB] Get: 33 http://deb.debian.org/debian forky/main amd64 libldap2 amd64 2.6.10+dfsg-1 [194 kB] Get: 34 http://deb.debian.org/debian forky/main amd64 libnghttp2-14 amd64 1.64.0-1.1+b1 [76.2 kB] Get: 35 http://deb.debian.org/debian forky/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB] Get: 36 http://deb.debian.org/debian forky/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 37 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.4.8-2 [24.1 kB] Get: 38 http://deb.debian.org/debian forky/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] Get: 39 http://deb.debian.org/debian forky/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB] Get: 40 http://deb.debian.org/debian forky/main amd64 libgnutls30t64 amd64 3.8.9-3 [1465 kB] Get: 41 http://deb.debian.org/debian forky/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-3 [58.3 kB] Get: 42 http://deb.debian.org/debian forky/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 43 http://deb.debian.org/debian forky/main amd64 libcurl4t64 amd64 8.15.0-1 [392 kB] Get: 44 http://deb.debian.org/debian forky/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB] Get: 45 http://deb.debian.org/debian forky/main amd64 librhash1 amd64 1.4.6-1 [137 kB] Get: 46 http://deb.debian.org/debian forky/main amd64 libuv1t64 amd64 1.50.0-2 [154 kB] Get: 47 http://deb.debian.org/debian forky/main amd64 cmake amd64 3.31.6-2 [12.0 MB] Get: 48 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.26 [91.8 kB] Get: 49 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-4 [539 kB] Get: 50 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 51 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 52 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.14.2-1 [19.8 kB] Get: 53 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.14.2-1 [8768 B] Get: 54 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 55 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 56 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 57 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 58 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 59 http://deb.debian.org/debian forky/main amd64 debhelper all 13.26 [939 kB] Fetched 31.4 MB in 0s (65.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19855 files and directories currently installed.) Preparing to unpack .../00-libexpat1_2.7.1-2_amd64.deb ... Unpacking libexpat1:amd64 (2.7.1-2) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../01-libproc2-0_2%3a4.0.4-9_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-9) ... Selecting previously unselected package procps. Preparing to unpack .../02-procps_2%3a4.0.4-9_amd64.deb ... Unpacking procps (2:4.0.4-9) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../03-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../04-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../05-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../06-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../07-gettext-base_0.23.1-2+b1_amd64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../08-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../09-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../10-bsdextrautils_2.41.1-1_amd64.deb ... Unpacking bsdextrautils (2.41.1-1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../11-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../12-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../13-m4_1.4.19-8_amd64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../14-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../15-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../16-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../17-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package cmake-data. Preparing to unpack .../18-cmake-data_3.31.6-2_all.deb ... Unpacking cmake-data (3.31.6-2) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../19-libxml2-16_2.14.5+dfsg-0.2_amd64.deb ... Unpacking libxml2-16:amd64 (2.14.5+dfsg-0.2) ... Selecting previously unselected package libarchive13t64:amd64. Preparing to unpack .../20-libarchive13t64_3.7.4-4+b1_amd64.deb ... Unpacking libarchive13t64:amd64 (3.7.4-4+b1) ... Selecting previously unselected package libbrotli1:amd64. 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Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../27-libgssapi-krb5-2_1.21.3-5_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-5) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../28-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libidn2-0:amd64. Preparing to unpack .../29-libidn2-0_2.3.8-4_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.8-4) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../30-libsasl2-modules-db_2.1.28+dfsg1-9_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-9) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../31-libsasl2-2_2.1.28+dfsg1-9_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-9) ... Selecting previously unselected package libldap2:amd64. Preparing to unpack .../32-libldap2_2.6.10+dfsg-1_amd64.deb ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/fastq-pair-1.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fastq-pair_1.0-3_source.changes dpkg-buildpackage: info: source package fastq-pair dpkg-buildpackage: info: source version 1.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake dh_auto_configure -O--buildsystem=cmake cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The C compiler identification is GNU 14.3.0 -- The CXX compiler identification is GNU 14.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (1.3s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu dh_auto_build -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j40 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/fastq-pair-1.0 -B/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' make -f CMakeFiles/fastq_pair.dir/build.make CMakeFiles/fastq_pair.dir/depend make[3]: Entering directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' cd /build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fastq-pair-1.0 /build/reproducible-path/fastq-pair-1.0 /build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu /build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu /build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu/CMakeFiles/fastq_pair.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' make -f CMakeFiles/fastq_pair.dir/build.make CMakeFiles/fastq_pair.dir/build make[3]: Entering directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' [ 25%] Building C object CMakeFiles/fastq_pair.dir/main.c.o [ 50%] Building C object CMakeFiles/fastq_pair.dir/fastq_pair.c.o [ 75%] Building C object CMakeFiles/fastq_pair.dir/robstr.c.o /usr/bin/cc -g -O2 -Werror=implicit-function-declaration 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-Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu99 -MD -MT CMakeFiles/fastq_pair.dir/robstr.c.o -MF CMakeFiles/fastq_pair.dir/robstr.c.o.d -o CMakeFiles/fastq_pair.dir/robstr.c.o -c /build/reproducible-path/fastq-pair-1.0/robstr.c [100%] Linking C executable fastq_pair /usr/bin/cmake -E cmake_link_script CMakeFiles/fastq_pair.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fastq-pair-1.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/fastq_pair.dir/link.d CMakeFiles/fastq_pair.dir/main.c.o CMakeFiles/fastq_pair.dir/robstr.c.o CMakeFiles/fastq_pair.dir/fastq_pair.c.o -o fastq_pair make[3]: Leaving directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' [100%] Built target fastq_pair make[2]: Leaving directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' dh_auto_test -O--buildsystem=cmake create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install --destdir=debian/fastq-pair/ -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j40 install DESTDIR=/build/reproducible-path/fastq-pair-1.0/debian/fastq-pair AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/fastq-pair-1.0 -B/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/fastq-pair-1.0/debian/fastq-pair/usr/bin/fastq_pair make[1]: Leaving directory '/build/reproducible-path/fastq-pair-1.0/obj-x86_64-linux-gnu' dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installman -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'fastq-pair-dbgsym' in '../fastq-pair-dbgsym_1.0-3_amd64.deb'. dpkg-deb: building package 'fastq-pair' in '../fastq-pair_1.0-3_amd64.deb'. dpkg-genbuildinfo --build=binary -O../fastq-pair_1.0-3_amd64.buildinfo dpkg-genchanges --build=binary -O../fastq-pair_1.0-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/293174 and its subdirectories I: Current time: Fri Aug 29 10:54:11 -12 2025 I: pbuilder-time-stamp: 1756508051 Fri Aug 29 22:54:13 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Fri Aug 29 22:54:13 UTC 2025 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Fri Aug 29 22:55:19 UTC 2025 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Fri Aug 29 22:55:19 UTC 2025 I: fastq-pair_1.0-3_amd64.changes: Format: 1.8 Date: Tue, 06 Dec 2022 20:04:00 +0100 Source: fastq-pair Binary: fastq-pair fastq-pair-dbgsym Architecture: amd64 Version: 1.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: fastq-pair - Rewrites paired end fastq so all reads have a mate to separate ou Changes: fastq-pair (1.0-3) unstable; urgency=medium . * Team upload. * Fix watch file * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: 6addc916bba4aa2d1847ac95efae28c5709a5b55 12224 fastq-pair-dbgsym_1.0-3_amd64.deb 3f985639b9fe38e3a65fa9f00b21f715522daab6 5881 fastq-pair_1.0-3_amd64.buildinfo ac05824f54905f7ed41af50758188fc625cd39d8 7336 fastq-pair_1.0-3_amd64.deb Checksums-Sha256: 44481c3c88cbf2906276b5b892bd20f31d8b91c091db38e3ae5d7750e2a20747 12224 fastq-pair-dbgsym_1.0-3_amd64.deb 26270a5f767b0b810f4708df8900108816e49f449dae0b1eb2d53ed35e9d6ea9 5881 fastq-pair_1.0-3_amd64.buildinfo 4c9217e6cf3016cbd3c70a4208c86d56c775f3d4cfe80af4c0fd1050b116d6c6 7336 fastq-pair_1.0-3_amd64.deb Files: 269b860beb5c24a00cffc0d039da1e7c 12224 debug optional fastq-pair-dbgsym_1.0-3_amd64.deb 93fe6cbc0055f5c25ba7bc67a9f543fc 5881 science optional fastq-pair_1.0-3_amd64.buildinfo ee2a1e9f35e533c763d8e2a04f75d0c8 7336 science optional fastq-pair_1.0-3_amd64.deb Fri Aug 29 22:55:20 UTC 2025 I: diffoscope 305 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_3-66799.service; invocation ID: 0599aebbabf548fc9805f270cb9ad33b # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.q6Vuuo9D/fastq-pair_1.0-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.q6Vuuo9D/fastq-pair_1.0-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.q6Vuuo9D/fastq-pair_1.0-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.q6Vuuo9D/b1/fastq-pair_1.0-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.q6Vuuo9D/b2/fastq-pair_1.0-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 224ms CPU time consumed: 189ms Memory peak: 17.3M (swap: 0B) Fri Aug 29 23:10:19 UTC 2025 I: diffoscope 305 found no differences in the changes files, and a .buildinfo file also exists. Fri Aug 29 23:10:19 UTC 2025 I: fastq-pair from forky built successfully and reproducibly on amd64. Fri Aug 29 23:10:20 UTC 2025 I: Removing signed fastq-pair_1.0-3_amd64.buildinfo.asc files: removed './b1/fastq-pair_1.0-3_amd64.buildinfo.asc' removed './b2/fastq-pair_1.0-3_amd64.buildinfo.asc'