Thu Aug 28 00:24:06 UTC 2025 I: starting to build librg-blast-parser-perl/forky/amd64 on jenkins on '2025-08-28 00:23' Thu Aug 28 00:24:06 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_28/70841/console.log Thu Aug 28 00:24:06 UTC 2025 I: Downloading source for forky/librg-blast-parser-perl=0.03-9 --2025-08-28 00:24:06-- http://deb.debian.org/debian/pool/main/libr/librg-blast-parser-perl/librg-blast-parser-perl_0.03-9.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2361 (2.3K) [text/prs.lines.tag] Saving to: ‘librg-blast-parser-perl_0.03-9.dsc’ 0K .. 100% 263M=0s 2025-08-28 00:24:06 (263 MB/s) - ‘librg-blast-parser-perl_0.03-9.dsc’ saved [2361/2361] Thu Aug 28 00:24:06 UTC 2025 I: librg-blast-parser-perl_0.03-9.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: librg-blast-parser-perl Binary: librg-blast-parser-perl Architecture: any Version: 0.03-9 Maintainer: Debian Med Packaging Team Uploaders: Laszlo Kajan , Andreas Tille Homepage: https://rostlab.org/ Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/librg-blast-parser-perl Vcs-Git: https://salsa.debian.org/med-team/librg-blast-parser-perl.git Testsuite: autopkgtest-pkg-perl Build-Depends: debhelper-compat (= 13), libextutils-xspp-perl, librostlab-blast0-dev (>= 1.0.1-12), librostlab3-dev, debhelper Package-List: librg-blast-parser-perl deb perl optional arch=any Checksums-Sha1: 70dde0ef7c45b2e633b2c4c738d384be6b4a0483 11635 librg-blast-parser-perl_0.03.orig.tar.gz 01157df79a0f0d181ac833ac0560f44170b8d942 6132 librg-blast-parser-perl_0.03-9.debian.tar.xz Checksums-Sha256: 215ecf7417de5ceedafc6466bd77b54ede07aab514bf3e5a0ea7245d509746cb 11635 librg-blast-parser-perl_0.03.orig.tar.gz 53957dce204a85e9e7152be04d295b16e310a050babc45d0faec2fa8cb84c0a4 6132 librg-blast-parser-perl_0.03-9.debian.tar.xz Files: 8dc732930465144a0affcb9ba38a9df9 11635 librg-blast-parser-perl_0.03.orig.tar.gz dbc5a14b9df795756bb011c1c2fd1146 6132 librg-blast-parser-perl_0.03-9.debian.tar.xz Dgit: 8d27bfcbcd341745269db698c553371b66ba681c debian archive/debian/0.03-9 https://git.dgit.debian.org/librg-blast-parser-perl -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmM2yHgUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdphdhAAmy9ZZdZuk4KL59lv42ugK2hLvpnb jazxdC6GlZHVa1zLzQUyTNDrqxlO6hDtRTWK3ZgZQFnbtlle3QRS97Q33iWS34ZK IoC7QXlULGpvoW4QTxCkXPLtZ1G3/dobPUz8Tyb+qG/SFUKxo5jy83bMM+ahZ1ya 6mSra2jagUsvEY35jinFjJh1mZFhfEYtWGQuS00x8afF209aiMi54qFfQCKtqMVs Cap7ouz4kaJmnClo/GBPxNryXlurxiZ8iOHsFAEn+JYvs1atlQG2pomTYJxTSteC kyVBjC4wl3W0CaEECctrDwUFLl1wVeAiJQHR2QgqL1t9Erli8rAs5ZqOBnK4QCij K+rPp3s8ozjxt3vzB19NkomsJHxFlMIkMfOtRflqJvaA1OhWesdF1Z5KUv2/ssa+ ZkIikRtBG0l9kNcTZRKuXjGbiyRZwyMYl80+jWgzngNY3TCrREQm/4dZ73KzH6OL 7GXV4Uf9mGiFD9dufk5kR8obzFbApMCdL/o8Y2OhxFJ0w+P6l/fZllZVZdIgnsqv nrY/cK/GS2N+EtZqm6ls+wMCmAhQ9/D9UCRpto8mtszI45yyhCl3tM+XWM35cFs/ GpDovPo+PkdbN/UX/2OwKm7S/RKICABKCEwvR850X9UoVJ5Sxa1jgpiAh37BQ2Ei ZT57hmY95Ckr79E= =+DVx -----END PGP SIGNATURE----- Thu Aug 28 00:24:06 UTC 2025 I: Checking whether the package is not for us Thu Aug 28 00:24:06 UTC 2025 I: Starting 1st build on remote node ionos15-amd64.debian.net. Thu Aug 28 00:24:06 UTC 2025 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Thu Aug 28 00:25:25 UTC 2025 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Sep 29 18:47:09 -12 2026 I: pbuilder-time-stamp: 1790750829 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [librg-blast-parser-perl_0.03-9.dsc] I: copying [./librg-blast-parser-perl_0.03.orig.tar.gz] I: copying [./librg-blast-parser-perl_0.03-9.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./librg-blast-parser-perl_0.03-9.dsc: no acceptable signature found dpkg-source: info: extracting librg-blast-parser-perl in librg-blast-parser-perl-0.03 dpkg-source: info: unpacking librg-blast-parser-perl_0.03.orig.tar.gz dpkg-source: info: unpacking librg-blast-parser-perl_0.03-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_clash_YYEMPTY.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3170430/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='f94a582077184c3897cf93fd809b1538' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3170430' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.HpGotysz/pbuilderrc_NClz --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.HpGotysz/b1 --logfile b1/build.log librg-blast-parser-perl_0.03-9.dsc' SUDO_GID='111' SUDO_HOME='/var/lib/jenkins' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.12.41+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.41-1 (2025-08-12) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3170430/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libextutils-xspp-perl, librostlab-blast0-dev (>= 1.0.1-12), librostlab3-dev, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19855 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libextutils-xspp-perl; however: Package libextutils-xspp-perl is not installed. pbuilder-satisfydepends-dummy depends on librostlab-blast0-dev (>= 1.0.1-12); however: Package librostlab-blast0-dev is not installed. pbuilder-satisfydepends-dummy depends on librostlab3-dev; however: Package librostlab3-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libextutils-xspp-perl{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} librostlab-blast0-dev{a} librostlab-blast0v5{a} librostlab3-dev{a} librostlab3t64{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 34 newly installed, 0 to remove and 0 not upgraded. Need to get 11.5 MB of archives. After unpacking 46.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.1-1 [94.7 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.19-8 [294 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.25 [91.6 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.14.2-1 [19.8 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.14.2-1 [8768 B] Get: 22 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.1 [640 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 debhelper all 13.25 [937 kB] Get: 30 http://deb.debian.org/debian forky/main amd64 libextutils-xspp-perl all 0.1800-3 [146 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 librostlab-blast0v5 amd64 1.0.1-14+b1 [77.4 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 librostlab3t64 amd64 1.0.20-14 [5076 B] Get: 33 http://deb.debian.org/debian forky/main amd64 librostlab3-dev amd64 1.0.20-14 [12.6 kB] Get: 34 http://deb.debian.org/debian forky/main amd64 librostlab-blast0-dev amd64 1.0.1-14+b1 [91.7 kB] Fetched 11.5 MB in 2s (5554 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19855 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. 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Unpacking dh-strip-nondeterminism (1.14.2-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../24-libxml2-16_2.14.5+dfsg-0.1_amd64.deb ... Unpacking libxml2-16:amd64 (2.14.5+dfsg-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2+b1_amd64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... 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Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up librostlab-blast0v5:amd64 (1.0.1-14+b1) ... Setting up librostlab-blast0-dev (1.0.1-14+b1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.2-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.2-1) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.25) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/librg-blast-parser-perl-0.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../librg-blast-parser-perl_0.03-9_source.changes dpkg-buildpackage: info: source package librg-blast-parser-perl dpkg-buildpackage: info: source version 0.03-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/librg-blast-parser-perl-0.03' dh_auto_configure -- LD="'x86_64-linux-gnu-gcc' -Wl,-z,relro -Wl,-z,now" OPTIMIZE="-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/librg-blast-parser-perl-0.03=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++03" /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/librg-blast-parser-perl-0.03=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/librg-blast-parser-perl-0.03=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now" "LD='x86_64-linux-gnu-gcc' -Wl,-z,relro -Wl,-z,now" "OPTIMIZE=-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/librg-blast-parser-perl-0.03=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++03" Checking if your kit is complete... Warning: the following files are missing in your kit: Parser.bs Parser.c Parser.o t/RG-Blast-Parser.t Please inform the author. Generating a Unix-style Makefile Writing Makefile for RG::Blast::Parser Writing MYMETA.yml and MYMETA.json make[1]: Leaving directory '/build/reproducible-path/librg-blast-parser-perl-0.03' dh_auto_build make -j42 make[1]: Entering directory '/build/reproducible-path/librg-blast-parser-perl-0.03' Running Mkbootstrap for Parser () "/usr/bin/perl" "/usr/share/perl/5.40/ExtUtils/xsubpp" -C++ -hiertype -noprototypes -typemap '/usr/share/perl/5.40/ExtUtils/typemap' -typemap '/build/reproducible-path/librg-blast-parser-perl-0.03/perlobject.map' -typemap '/build/reproducible-path/librg-blast-parser-perl-0.03/typemap' Parser.xs > Parser.xsc chmod 644 "Parser.bs" "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Parser.bs blib/arch/auto/RG/Blast/Parser/Parser.bs 644 cp lib/RG/Blast/Parser.pm blib/lib/RG/Blast/Parser.pm AutoSplitting blib/lib/RG/Blast/Parser.pm (blib/lib/auto/RG/Blast/Parser) mv Parser.xsc Parser.c g++ -c -I. -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/librg-blast-parser-perl-0.03=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++03 -DVERSION=\"0.03\" -DXS_VERSION=\"0.03\" -fPIC "-I/usr/lib/x86_64-linux-gnu/perl/5.40/CORE" Parser.c cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ /usr/bin/perl -MExtUtils::XSpp::Cmd -e xspp -- --typemap=typemap.xsp Parser.xsp: In function 'void XS_RG__Blast__Parser_parse(PerlInterpreter*, CV*)': /usr/bin/perl -MExtUtils::XSpp::Cmd -e xspp -- --typemap=typemap.xsp Parser.xsp:51:57: warning: too many arguments for format [-Wformat-extra-args] rm -f blib/arch/auto/RG/Blast/Parser/Parser.so 'x86_64-linux-gnu-gcc' -Wl,-z,relro -Wl,-z,now -shared -L/usr/local/lib -fstack-protector-strong Parser.o -o blib/arch/auto/RG/Blast/Parser/Parser.so \ -lrostlab-blast \ chmod 755 blib/arch/auto/RG/Blast/Parser/Parser.so Manifying 1 pod document make[1]: Leaving directory '/build/reproducible-path/librg-blast-parser-perl-0.03' dh_auto_test make -j42 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/librg-blast-parser-perl-0.03' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Parser.bs blib/arch/auto/RG/Blast/Parser/Parser.bs 644 PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/01RG-Blast-Parserload.t .. 1..1 ok 1 - use RG::Blast::Parser; ok examples/badformat.ali:46.1-7: invalid character 'Q' examples/badformat.ali:46.1-8: invalid character 'u' examples/badformat.ali:46.1-9: invalid character 'e' examples/badformat.ali:46.1-10: invalid character 'r' examples/badformat.ali:46.1-11: invalid character 'y' examples/badformat.ali:46.1-12: invalid character ':' examples/badformat.ali:46.14: syntax error, unexpected INT t/02test.t ................. 1..23 ok 1 - use RG::Blast::Parser; ok 2 - An object of class 'RG::Blast::Parser' isa 'RG::Blast::Parser' ok 3 - RG::Blast::Parser->can(...) ok 4 ok 5 ok 6 ok 7 - An object of class 'RG::Blast::Parser' isa 'RG::Blast::Parser' ok 8 - RG::Blast::Parser->can(...) ok 9 ok 10 ok 11 ok 12 - An object of class 'RG::Blast::Parser' isa 'RG::Blast::Parser' ok 13 - RG::Blast::Parser->can(...) ok 14 ok 15 ok 16 - An object of class 'RG::Blast::Parser' isa 'RG::Blast::Parser' ok 17 - RG::Blast::Parser->can(...) ok 18 ok 19 ok 20 - An object of class 'RG::Blast::Parser' isa 'RG::Blast::Parser' ok 21 - RG::Blast::Parser->can(...) ok 22 ok 23 ok All tests successful. Files=2, Tests=24, 1 wallclock secs ( 0.05 usr 0.00 sys + 0.17 cusr 0.07 csys = 0.29 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/librg-blast-parser-perl-0.03' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/librg-blast-parser-perl/ make -j42 install DESTDIR=/build/reproducible-path/librg-blast-parser-perl-0.03/debian/librg-blast-parser-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/librg-blast-parser-perl-0.03' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Parser.bs blib/arch/auto/RG/Blast/Parser/Parser.bs 644 Manifying 1 pod document Files found in blib/arch: installing files in blib/lib into architecture dependent library tree Installing /build/reproducible-path/librg-blast-parser-perl-0.03/debian/librg-blast-parser-perl/usr/lib/x86_64-linux-gnu/perl5/5.40/auto/RG/Blast/Parser/Parser.so Installing /build/reproducible-path/librg-blast-parser-perl-0.03/debian/librg-blast-parser-perl/usr/lib/x86_64-linux-gnu/perl5/5.40/RG/Blast/Parser.pm Installing /build/reproducible-path/librg-blast-parser-perl-0.03/debian/librg-blast-parser-perl/usr/lib/x86_64-linux-gnu/perl5/5.40/auto/RG/Blast/Parser/autosplit.ix Installing /build/reproducible-path/librg-blast-parser-perl-0.03/debian/librg-blast-parser-perl/usr/share/man/man3/RG::Blast::Parser.3pm make[1]: Leaving directory '/build/reproducible-path/librg-blast-parser-perl-0.03' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'librg-blast-parser-perl' in '../librg-blast-parser-perl_0.03-9_amd64.deb'. dpkg-deb: building package 'librg-blast-parser-perl-dbgsym' in '../librg-blast-parser-perl-dbgsym_0.03-9_amd64.deb'. dpkg-genbuildinfo --build=binary -O../librg-blast-parser-perl_0.03-9_amd64.buildinfo dpkg-genchanges --build=binary -O../librg-blast-parser-perl_0.03-9_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3170430 and its subdirectories I: Current time: Tue Sep 29 18:48:24 -12 2026 I: pbuilder-time-stamp: 1790750904 Thu Aug 28 00:25:25 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos11-amd64.debian.net. Thu Aug 28 00:25:25 UTC 2025 I: Preparing to do remote build '2' on ionos11-amd64.debian.net. Thu Aug 28 00:26:40 UTC 2025 I: Deleting $TMPDIR on ionos11-amd64.debian.net. Thu Aug 28 00:26:40 UTC 2025 I: librg-blast-parser-perl_0.03-9_amd64.changes: Format: 1.8 Date: Fri, 30 Sep 2022 12:04:56 +0200 Source: librg-blast-parser-perl Binary: librg-blast-parser-perl librg-blast-parser-perl-dbgsym Architecture: amd64 Version: 0.03-9 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: librg-blast-parser-perl - very fast NCBI BLAST parser - binding for Perl Closes: 1012988 Changes: librg-blast-parser-perl (0.03-9) unstable; urgency=medium . * Team upload. * Rebuild against librostlab-blast 1.0.1-13. (Closes: #1012988) * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: 520d59aa44bfb16161a3a2a827a57caeb88d128b 193192 librg-blast-parser-perl-dbgsym_0.03-9_amd64.deb ab808e5cd2f72b94304fcd5222e2b1657d86ee6e 5210 librg-blast-parser-perl_0.03-9_amd64.buildinfo 3e90c1348fd1407e5c08e54307530769dcc77342 34456 librg-blast-parser-perl_0.03-9_amd64.deb Checksums-Sha256: f486bcb5b6774a44145a3bbc20f643b42bff992c3eb3e99cfe5ebcbd53f8a4ad 193192 librg-blast-parser-perl-dbgsym_0.03-9_amd64.deb 213f9fc290094aa33f0d045a1e96a645285f5837f98b48a0b1652a568a05391b 5210 librg-blast-parser-perl_0.03-9_amd64.buildinfo 5cc6d972bc339bcacd9e47aa1added89c64dd0e5330c6fa98141579e67b12966 34456 librg-blast-parser-perl_0.03-9_amd64.deb Files: 673e417e175f49c941d8ffdf1f9ed3f1 193192 debug optional librg-blast-parser-perl-dbgsym_0.03-9_amd64.deb dc7cd1eaf8269267f7924671952980f6 5210 perl optional librg-blast-parser-perl_0.03-9_amd64.buildinfo fbc0560dcd59bcf95e95180291e1082d 34456 perl optional librg-blast-parser-perl_0.03-9_amd64.deb Thu Aug 28 00:26:41 UTC 2025 I: diffoscope 305 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_28-70841.service; invocation ID: 053974f4278a4cf3848446e6e52c1f4f # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.HpGotysz/librg-blast-parser-perl_0.03-9.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.HpGotysz/librg-blast-parser-perl_0.03-9.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.HpGotysz/librg-blast-parser-perl_0.03-9.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.HpGotysz/b1/librg-blast-parser-perl_0.03-9_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.HpGotysz/b2/librg-blast-parser-perl_0.03-9_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 207ms CPU time consumed: 178ms Memory peak: 17.8M (swap: 0B) Thu Aug 28 00:26:41 UTC 2025 I: diffoscope 305 found no differences in the changes files, and a .buildinfo file also exists. Thu Aug 28 00:26:41 UTC 2025 I: librg-blast-parser-perl from forky built successfully and reproducibly on amd64. Thu Aug 28 00:26:42 UTC 2025 I: Removing signed librg-blast-parser-perl_0.03-9_amd64.buildinfo.asc files: removed './b1/librg-blast-parser-perl_0.03-9_amd64.buildinfo.asc' removed './b2/librg-blast-parser-perl_0.03-9_amd64.buildinfo.asc'