Fri Aug 29 01:29:24 UTC 2025 I: starting to build seqmagick/forky/amd64 on jenkins on '2025-08-29 01:29' Fri Aug 29 01:29:24 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_28/70990/console.log Fri Aug 29 01:29:24 UTC 2025 I: Downloading source for forky/seqmagick=0.8.6-3 --2025-08-29 01:29:25-- http://deb.debian.org/debian/pool/main/s/seqmagick/seqmagick_0.8.6-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2262 (2.2K) [text/prs.lines.tag] Saving to: ‘seqmagick_0.8.6-3.dsc’ 0K .. 100% 273M=0s 2025-08-29 01:29:25 (273 MB/s) - ‘seqmagick_0.8.6-3.dsc’ saved [2262/2262] Fri Aug 29 01:29:25 UTC 2025 I: seqmagick_0.8.6-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: seqmagick Binary: seqmagick Architecture: all Version: 0.8.6-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: https://github.com/fhcrc/seqmagick/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/seqmagick Vcs-Git: https://salsa.debian.org/med-team/seqmagick.git Testsuite: autopkgtest, autopkgtest-pkg-pybuild Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-pytest , python3-biopython, python3-pygtrie Package-List: seqmagick deb science optional arch=all Checksums-Sha1: d4235a62684b2bcd3cd5987cde946db127b50ef4 664548 seqmagick_0.8.6.orig.tar.gz f46d7c559f986ec87ad0e21ceb21ebe47f9b3aec 6012 seqmagick_0.8.6-3.debian.tar.xz Checksums-Sha256: 83a83bbbf76eae756e96470075b729f2ae78a017a9432330133c6f94d9d49cba 664548 seqmagick_0.8.6.orig.tar.gz 50115b409644ade48c176a6c3b80189263756f315a66cf024365e3fe7d8dbd38 6012 seqmagick_0.8.6-3.debian.tar.xz Files: ce0227e287a5fb54ac8312a3a4a54403 664548 seqmagick_0.8.6.orig.tar.gz e132a2b0dc649c2f4042bf9065b2cf0e 6012 seqmagick_0.8.6-3.debian.tar.xz Dgit: 22b5585dbbd9ffd0d12c812cfe3c8df78cc039aa debian archive/debian/0.8.6-3 https://git.dgit.debian.org/seqmagick -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmayhKEUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdrFaw//ZuiU4lRQ18uCafgiXtEShFo6A4Kc i2sqwG2pJ+PPCO7YN5mZ5qWuUtATlkGdgaIYp+BD0RBuBNyeijeAzxF2TWYgcK84 7Igr7wyXAgQQp67QYzjqWKP6EEttFcK4l54kSSwy7Asl8EMHeq0ov/50X+tm142e dyZqSWPNJJ8SOw1LkMAlPH5F2p+2OR0SsVgorQ39NsNwnSzpYDvz3Kok/N+Fc28x d3a3qVw+1RUrvefbbO1cG8Uuz0wmbPJs/f/vR738ynsszLHccqRw1ptLTwKMrCfM 3e7KTuVZJQrl35RLU4Rj9poIwfRZempZItH89vk3OnbN3TregjS98gaibxkN+3ZV 3Wssg6BFJVmIPymcvMGz/8QyZOcEKilx02dotyOkBRcG6ljR7V/14znAv1PZJtXH oI4LzwAz6dRAblqZ0RjFLHDGYkH/PCmJx3JWKnIltH9SUQujIGvHu3UdAUOcvbtd 8gt52eCi+CpntgIdoarbdXaihreXMsCstjdQMDQ+UhRVQCmxbDxy4qF75cpUF9RB r92zDfa0V5zM8KU4l5huIcUCnJt8H2/W5FDPiWNjBQReN0rqL6BWFlkdvYzswoIU vzWOq1VcFgL0/fk2aaDLMr8C6T1/cuGlVLCn1K+13WXYMEBiXLi99JMCafTC6BAi LJUUfN/mycqj9b0= =xtMr -----END PGP SIGNATURE----- Fri Aug 29 01:29:25 UTC 2025 I: Checking whether the package is not for us Fri Aug 29 01:29:25 UTC 2025 I: Starting 1st build on remote node ionos15-amd64.debian.net. Fri Aug 29 01:29:25 UTC 2025 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Fri Aug 29 01:32:18 UTC 2025 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Sep 30 19:52:25 -12 2026 I: pbuilder-time-stamp: 1790841145 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [seqmagick_0.8.6-3.dsc] I: copying [./seqmagick_0.8.6.orig.tar.gz] I: copying [./seqmagick_0.8.6-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./seqmagick_0.8.6-3.dsc: no acceptable signature found dpkg-source: info: extracting seqmagick in seqmagick-0.8.6 dpkg-source: info: unpacking seqmagick_0.8.6.orig.tar.gz dpkg-source: info: unpacking seqmagick_0.8.6-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying biopython_1.71_dual_coding_support.patch dpkg-source: info: applying pytest.patch dpkg-source: info: applying replace-ungap.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2698431/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='6e1786c8f9034469bba3fdd5b91867c2' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2698431' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.sESfPY07/pbuilderrc_jwsM --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.sESfPY07/b1 --logfile b1/build.log seqmagick_0.8.6-3.dsc' SUDO_GID='111' SUDO_HOME='/var/lib/jenkins' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.12.41+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.41-1 (2025-08-12) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2698431/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-pytest, python3-biopython, python3-pygtrie dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19855 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-pygtrie; however: Package python3-pygtrie is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libharfbuzz0b{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} liblapack3{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2-16{a} libxrender1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-biopython{a} python3-cairo{a} python3-charset-normalizer{a} python3-freetype{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pil{a} python3-pkg-resources{a} python3-pluggy{a} python3-pygtrie{a} python3-pytest{a} python3-reportlab{a} python3-rlpycairo{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl fonts-dejavu-extra libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ python-biopython-doc python3-olefile python3-pygments shared-mime-info wget xdg-user-dirs 0 packages upgraded, 116 newly installed, 0 to remove and 0 not upgraded. Need to get 53.3 MB of archives. After unpacking 183 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.7.1-2 [108 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libpython3.13-minimal amd64 3.13.7-1 [864 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 python3.13-minimal amd64 3.13.7-1 [2216 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 python3-minimal amd64 3.13.5-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.4.8-2 [24.1 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 libpython3.13-stdlib amd64 3.13.7-1 [1960 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 python3.13 amd64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 libpython3-stdlib amd64 3.13.5-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 python3 amd64 3.13.5-1 [28.2 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 python3-numpy-dev amd64 1:2.2.4+ds-1 [139 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libblas3 amd64 3.12.1-6 [160 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libgfortran5 amd64 15.2.0-1 [862 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 liblapack3 amd64 3.12.1-6 [2447 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 python3-numpy amd64 1:2.2.4+ds-1 [5096 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 22 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.1-1 [94.7 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 30 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.19-8 [294 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 33 http://deb.debian.org/debian forky/main amd64 automake all 1:1.17-4 [862 kB] Get: 34 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 35 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.25 [91.6 kB] Get: 36 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-4 [539 kB] Get: 37 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 38 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 39 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.14.2-1 [19.8 kB] Get: 40 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.14.2-1 [8768 B] Get: 41 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 42 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 43 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 44 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.1 [640 kB] Get: 45 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 46 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian forky/main amd64 debhelper all 13.25 [937 kB] Get: 49 http://deb.debian.org/debian forky/main amd64 dh-python all 6.20250414 [116 kB] Get: 50 http://deb.debian.org/debian forky/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 51 http://deb.debian.org/debian forky/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 52 http://deb.debian.org/debian forky/main amd64 libfontenc1 amd64 1:1.1.8-1+b2 [23.3 kB] Get: 53 http://deb.debian.org/debian forky/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB] Get: 54 http://deb.debian.org/debian forky/main amd64 libpng16-16t64 amd64 1.6.50-1 [282 kB] Get: 55 http://deb.debian.org/debian forky/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 56 http://deb.debian.org/debian forky/main amd64 x11-common all 1:7.7+24 [217 kB] Get: 57 http://deb.debian.org/debian forky/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 58 http://deb.debian.org/debian forky/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get: 59 http://deb.debian.org/debian forky/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 60 http://deb.debian.org/debian forky/main amd64 fontconfig-config amd64 2.15.0-2.3 [318 kB] Get: 61 http://deb.debian.org/debian forky/main amd64 libfontconfig1 amd64 2.15.0-2.3 [392 kB] Get: 62 http://deb.debian.org/debian forky/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 63 http://deb.debian.org/debian forky/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 64 http://deb.debian.org/debian forky/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 65 http://deb.debian.org/debian forky/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 66 http://deb.debian.org/debian forky/main amd64 libx11-data all 2:1.8.12-1 [343 kB] Get: 67 http://deb.debian.org/debian forky/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB] Get: 68 http://deb.debian.org/debian forky/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 69 http://deb.debian.org/debian forky/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 70 http://deb.debian.org/debian forky/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get: 71 http://deb.debian.org/debian forky/main amd64 libxrender1 amd64 1:0.9.12-1 [27.9 kB] Get: 72 http://deb.debian.org/debian forky/main amd64 libcairo2 amd64 1.18.4-1+b1 [538 kB] Get: 73 http://deb.debian.org/debian forky/main amd64 libdeflate0 amd64 1.23-2 [47.3 kB] Get: 74 http://deb.debian.org/debian forky/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] Get: 75 http://deb.debian.org/debian forky/main amd64 libglib2.0-0t64 amd64 2.84.4-3 [1518 kB] Get: 76 http://deb.debian.org/debian forky/main amd64 libgraphite2-3 amd64 1.3.14-3 [75.1 kB] Get: 77 http://deb.debian.org/debian forky/main amd64 libharfbuzz0b amd64 10.2.0-1+b1 [479 kB] Get: 78 http://deb.debian.org/debian forky/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get: 79 http://deb.debian.org/debian forky/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 80 http://deb.debian.org/debian forky/main amd64 libjpeg62-turbo amd64 1:2.1.5-4 [168 kB] Get: 81 http://deb.debian.org/debian forky/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 82 http://deb.debian.org/debian forky/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 83 http://deb.debian.org/debian forky/main amd64 libopenjp2-7 amd64 2.5.3-2.1 [204 kB] Get: 84 http://deb.debian.org/debian forky/main amd64 libraqm0 amd64 0.10.3-1 [14.0 kB] Get: 85 http://deb.debian.org/debian forky/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Get: 86 http://deb.debian.org/debian forky/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Get: 87 http://deb.debian.org/debian forky/main amd64 libtiff6 amd64 4.7.0-4 [346 kB] Get: 88 http://deb.debian.org/debian forky/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB] Get: 89 http://deb.debian.org/debian forky/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB] Get: 90 http://deb.debian.org/debian forky/main amd64 python3-all amd64 3.13.5-1 [1048 B] Get: 91 http://deb.debian.org/debian forky/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 92 http://deb.debian.org/debian forky/main amd64 python3-charset-normalizer amd64 3.4.3-1 [131 kB] Get: 93 http://deb.debian.org/debian forky/main amd64 python3-pil amd64 11.1.0-5+b1 [513 kB] Get: 94 http://deb.debian.org/debian forky/main amd64 python3-cairo amd64 1.27.0-2 [114 kB] Get: 95 http://deb.debian.org/debian forky/main amd64 python3-freetype all 2.5.1-2 [89.4 kB] Get: 96 http://deb.debian.org/debian forky/main amd64 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 97 http://deb.debian.org/debian forky/main amd64 python3-reportlab all 4.4.3-1 [1168 kB] Get: 98 http://deb.debian.org/debian forky/main amd64 sgml-base all 1.31+nmu1 [10.9 kB] Get: 99 http://deb.debian.org/debian forky/main amd64 xml-core all 0.19 [20.1 kB] Get: 100 http://deb.debian.org/debian forky/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get: 101 http://deb.debian.org/debian forky/main amd64 python3-biopython amd64 1.85+dfsg-4 [1672 kB] Get: 102 http://deb.debian.org/debian forky/main amd64 python3-more-itertools all 10.7.0-1 [67.4 kB] Get: 103 http://deb.debian.org/debian forky/main amd64 python3-typing-extensions all 4.14.1-1 [91.3 kB] Get: 104 http://deb.debian.org/debian forky/main amd64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 105 http://deb.debian.org/debian forky/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 106 http://deb.debian.org/debian forky/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 107 http://deb.debian.org/debian forky/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 108 http://deb.debian.org/debian forky/main amd64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 109 http://deb.debian.org/debian forky/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 110 http://deb.debian.org/debian forky/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 111 http://deb.debian.org/debian forky/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 112 http://deb.debian.org/debian forky/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 113 http://deb.debian.org/debian forky/main amd64 python3-packaging all 25.0-1 [56.6 kB] Get: 114 http://deb.debian.org/debian forky/main amd64 python3-pluggy all 1.6.0-1 [27.1 kB] Get: 115 http://deb.debian.org/debian forky/main amd64 python3-pygtrie all 2.2-3 [17.1 kB] Get: 116 http://deb.debian.org/debian forky/main amd64 python3-pytest all 8.3.5-2 [250 kB] Fetched 53.3 MB in 5s (9793 kB/s) Preconfiguring packages ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_amd64.deb ... Unpacking python3.13 (3.13.7-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Setting up x11-common (1:7.7+24) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:amd64 (1.23-2) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.19-8) ... Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ... Setting up file (1:5.46-5) ... Setting up libjbig0:amd64 (2.1-6.1+b2) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Oct 1 07:54:04 UTC 2026. Universal Time is now: Thu Oct 1 07:54:04 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:amd64 (1:1.1.8-1+b2) ... Setting up autotools-dev (20240727.1) ... Setting up libblas3:amd64 (3.12.1-6) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.1.5-4) ... 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Setting up python3-biopython (1.85+dfsg-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/seqmagick-0.8.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../seqmagick_0.8.6-3_source.changes dpkg-buildpackage: info: source package seqmagick dpkg-buildpackage: info: source version 0.8.6-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules execute_before_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/seqmagick-0.8.6' mkdir -p seqmagick/data echo 0.8.6 > seqmagick/data/ver make[1]: Leaving directory '/build/reproducible-path/seqmagick-0.8.6' dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py clean /usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License (GPL) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running clean removing '/build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/seqmagick-0.8.6' mkdir -p seqmagick/data rm -rf seqmagick/data rm -rf seqmagick.egg-info make[1]: Leaving directory '/build/reproducible-path/seqmagick-0.8.6' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild debian/rules execute_before_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/seqmagick-0.8.6' mkdir -p seqmagick/data echo 0.8.6 > seqmagick/data/ver make[1]: Leaving directory '/build/reproducible-path/seqmagick-0.8.6' dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py config /usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License (GPL) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License (GPL) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running build running build_py creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick copying seqmagick/fileformat.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick copying seqmagick/transform.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick copying seqmagick/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test copying seqmagick/test/test_subcommands_quality_filter.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test copying seqmagick/test/test_subcommands_convert.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test copying seqmagick/test/test_subcommands_backtrans_align.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test copying seqmagick/test/test_transform.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test copying seqmagick/test/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test copying seqmagick/test/test_subcommands_common.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/scripts copying seqmagick/scripts/cli.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/scripts copying seqmagick/scripts/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/scripts creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands copying seqmagick/subcommands/convert.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands copying seqmagick/subcommands/common.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands copying seqmagick/subcommands/backtrans_align.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands copying seqmagick/subcommands/info.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands copying seqmagick/subcommands/mogrify.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands copying seqmagick/subcommands/extract_ids.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands copying seqmagick/subcommands/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands copying seqmagick/subcommands/quality_filter.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration copying seqmagick/test/integration/test_mogrify.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration copying seqmagick/test/integration/test_extract_ids.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration copying seqmagick/test/integration/test_convert.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration copying seqmagick/test/integration/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration copying seqmagick/test/integration/test_info.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data creating /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/data copying seqmagick/data/ver -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/data copying seqmagick/test/integration/data/input6.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2.phy -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input2.fasta.gz -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output3.nex -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output3.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input2.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output5.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input3.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2.nex -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input1.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2_ungap_cut.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input2.fasta.bz2 -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input5.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output4.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input4_ambig.fasta -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output4.nex -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build; python3.13 -m pytest ============================= test session starts ============================== platform linux -- Python 3.13.7, pytest-8.3.5, pluggy-1.6.0 rootdir: /build/reproducible-path/seqmagick-0.8.6 plugins: typeguard-4.4.4 collected 154 items seqmagick/test/integration/test_convert.py .ss.............. [ 11%] seqmagick/test/integration/test_extract_ids.py ..ss.. [ 14%] seqmagick/test/integration/test_info.py ...s [ 17%] seqmagick/test/integration/test_mogrify.py .s. [ 19%] seqmagick/test/test_subcommands_backtrans_align.py ......... [ 25%] seqmagick/test/test_subcommands_common.py ..................s..... [ 40%] seqmagick/test/test_subcommands_convert.py ...... [ 44%] seqmagick/test/test_subcommands_quality_filter.py ...................... [ 59%] .... [ 61%] seqmagick/test/test_transform.py ....................................... [ 87%] .................... [100%] ======================== 147 passed, 7 skipped in 0.74s ======================== create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/seqmagick/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick /usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License (GPL) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying seqmagick/data/ver -> /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/data running install_lib creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/fileformat.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/__pycache__/fileformat.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/__pycache__/transform.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/__pycache__ creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/data/ver -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/data creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/test_subcommands_quality_filter.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/__pycache__/test_subcommands_backtrans_align.cpython-313-pytest-8.3.5.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/__pycache__/test_subcommands_common.cpython-313-pytest-8.3.5.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/__pycache__/test_subcommands_convert.cpython-313-pytest-8.3.5.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/__pycache__/test_transform.cpython-313-pytest-8.3.5.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/__pycache__/test_subcommands_quality_filter.cpython-313-pytest-8.3.5.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/test_subcommands_convert.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/test_subcommands_backtrans_align.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/test_transform.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/__pycache__/test_extract_ids.cpython-313-pytest-8.3.5.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/__pycache__/test_convert.cpython-313-pytest-8.3.5.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/__pycache__/test_info.cpython-313-pytest-8.3.5.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/__pycache__/test_mogrify.cpython-313-pytest-8.3.5.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/__pycache__ creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/input6.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/output2.phy -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/input2.fasta.gz -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/output3.nex -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/output3.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/input2.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/output5.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/input3.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/output2.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/output2.nex -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/input1.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/output2_ungap_cut.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/input2.fasta.bz2 -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/input5.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/output4.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/input4_ambig.fasta -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/data/output4.nex -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/test_mogrify.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/test_extract_ids.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/test_convert.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/integration/test_info.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/test/test_subcommands_common.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/transform.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/scripts copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/scripts/cli.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/scripts creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/scripts/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/scripts/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/scripts/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/scripts/__pycache__/cli.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/scripts/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/scripts/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/scripts creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/convert.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/common.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands creating /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/__pycache__/extract_ids.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/__pycache__/quality_filter.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/__pycache__/common.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/__pycache__/mogrify.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/__pycache__/info.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/__pycache__/backtrans_align.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/__pycache__/convert.cpython-313.pyc -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/__pycache__ copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/backtrans_align.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/info.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/mogrify.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/extract_ids.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/subcommands/quality_filter.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands copying /build/reproducible-path/seqmagick-0.8.6/.pybuild/cpython3_3.13/build/seqmagick/__init__.py -> /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/fileformat.py to fileformat.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/test_subcommands_quality_filter.py to test_subcommands_quality_filter.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/test_subcommands_convert.py to test_subcommands_convert.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/test_subcommands_backtrans_align.py to test_subcommands_backtrans_align.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/test_transform.py to test_transform.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/data/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/test_mogrify.py to test_mogrify.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/test_extract_ids.py to test_extract_ids.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/test_convert.py to test_convert.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/integration/test_info.py to test_info.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/test/test_subcommands_common.py to test_subcommands_common.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/transform.py to transform.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/scripts/cli.py to cli.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/scripts/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/convert.py to convert.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/common.py to common.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/backtrans_align.py to backtrans_align.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/info.py to info.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/mogrify.py to mogrify.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/extract_ids.py to extract_ids.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/subcommands/quality_filter.py to quality_filter.cpython-313.pyc byte-compiling /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick/__init__.py to __init__.cpython-313.pyc running install_egg_info running egg_info creating seqmagick.egg-info writing seqmagick.egg-info/PKG-INFO writing dependency_links to seqmagick.egg-info/dependency_links.txt writing entry points to seqmagick.egg-info/entry_points.txt writing requirements to seqmagick.egg-info/requires.txt writing top-level names to seqmagick.egg-info/top_level.txt writing manifest file 'seqmagick.egg-info/SOURCES.txt' reading manifest file 'seqmagick.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files matching '*.png' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'seqmagick.egg-info/SOURCES.txt' Copying seqmagick.egg-info to /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/lib/python3.13/dist-packages/seqmagick-0.8.6.egg-info Skipping SOURCES.txt running install_scripts Installing seqmagick script to /build/reproducible-path/seqmagick-0.8.6/debian/seqmagick/usr/bin dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild I: dh_python3 tools:114: replacing shebang in debian/seqmagick/usr/bin/seqmagick dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'seqmagick' in '../seqmagick_0.8.6-3_all.deb'. dpkg-genbuildinfo --build=binary -O../seqmagick_0.8.6-3_amd64.buildinfo dpkg-genchanges --build=binary -O../seqmagick_0.8.6-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2698431 and its subdirectories I: Current time: Wed Sep 30 19:55:16 -12 2026 I: pbuilder-time-stamp: 1790841316 Fri Aug 29 01:32:18 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos11-amd64.debian.net. Fri Aug 29 01:32:18 UTC 2025 I: Preparing to do remote build '2' on ionos11-amd64.debian.net. Fri Aug 29 01:36:25 UTC 2025 I: Deleting $TMPDIR on ionos11-amd64.debian.net. Fri Aug 29 01:36:25 UTC 2025 I: seqmagick_0.8.6-3_amd64.changes: Format: 1.8 Date: Tue, 06 Aug 2024 22:05:39 +0200 Source: seqmagick Binary: seqmagick Architecture: all Version: 0.8.6-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: seqmagick - imagemagick-like frontend to Biopython SeqIO Closes: 1077409 Changes: seqmagick (0.8.6-3) unstable; urgency=medium . * d/rules: workaround upstream __version__ setting. The original setup.py code uses git, but this is not available in the build environment. (Closes: #1077409) * d/control: declare compliance to standards version 4.7.0. Checksums-Sha1: a046c0f2466ce10fc37f78c37e1c9e1368eb5db4 40104 seqmagick_0.8.6-3_all.deb 648ce7a1e94df7e53fbf404c5476c35a1bb16dec 7224 seqmagick_0.8.6-3_amd64.buildinfo Checksums-Sha256: 8d119fc9fc5b7463aa0f5c0a0144123b53c1148432c930a49f14b587753c8c24 40104 seqmagick_0.8.6-3_all.deb f97d20ae39f5f879611559313427688de68fbcbcd430a60483c6e84f90b03147 7224 seqmagick_0.8.6-3_amd64.buildinfo Files: ea72f9a6835a77a157b4576fa3d09a91 40104 science optional seqmagick_0.8.6-3_all.deb 43b089d7224fcd5fd3228f4a7c4f1bc0 7224 science optional seqmagick_0.8.6-3_amd64.buildinfo Fri Aug 29 01:36:26 UTC 2025 I: diffoscope 305 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_28-70990.service; invocation ID: a29c8365fb7d424fbcec6589462963eb # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.sESfPY07/seqmagick_0.8.6-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.sESfPY07/seqmagick_0.8.6-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.sESfPY07/seqmagick_0.8.6-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.sESfPY07/b1/seqmagick_0.8.6-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.sESfPY07/b2/seqmagick_0.8.6-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 209ms CPU time consumed: 183ms Memory peak: 18M (swap: 0B) Fri Aug 29 01:36:26 UTC 2025 I: diffoscope 305 found no differences in the changes files, and a .buildinfo file also exists. Fri Aug 29 01:36:26 UTC 2025 I: seqmagick from forky built successfully and reproducibly on amd64. Fri Aug 29 01:36:27 UTC 2025 I: Removing signed seqmagick_0.8.6-3_amd64.buildinfo.asc files: removed './b1/seqmagick_0.8.6-3_amd64.buildinfo.asc' removed './b2/seqmagick_0.8.6-3_amd64.buildinfo.asc'