Sat Nov 1 07:13:14 UTC 2025 I: starting to build sim4/forky/amd64 on jenkins on '2025-11-01 07:13' Sat Nov 1 07:13:14 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_20/72049/console.log Sat Nov 1 07:13:14 UTC 2025 I: Downloading source for forky/sim4=0.0.20121010-9 --2025-11-01 07:13:14-- http://deb.debian.org/debian/pool/main/s/sim4/sim4_0.0.20121010-9.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2099 (2.0K) [text/prs.lines.tag] Saving to: ‘sim4_0.0.20121010-9.dsc’ 0K .. 100% 243M=0s 2025-11-01 07:13:14 (243 MB/s) - ‘sim4_0.0.20121010-9.dsc’ saved [2099/2099] Sat Nov 1 07:13:14 UTC 2025 I: sim4_0.0.20121010-9.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: sim4 Binary: sim4 Architecture: any Version: 0.0.20121010-9 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://globin.bx.psu.edu/html/docs/sim4.html Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/sim4 Vcs-Git: https://salsa.debian.org/med-team/sim4.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: sim4 deb science optional arch=any Checksums-Sha1: af09413d4f79f2f6f642c26f1084a9403c3a3257 61240 sim4_0.0.20121010.orig.tar.gz 3bdd5463148184627d6275bcc5e41dcb2fd40722 317588 sim4_0.0.20121010-9.debian.tar.xz Checksums-Sha256: d2132f61e47f2de5e35d0b48a0f697ae79ece3e8b91177eae2dfe47bda97b4a5 61240 sim4_0.0.20121010.orig.tar.gz e2fc67b1106b7313f4ef6ae16cd76539ff585ef4e8e0e12aa52f2d4a04adc67a 317588 sim4_0.0.20121010-9.debian.tar.xz Files: 8bca6eb05c5aaf689db0db12522bdf34 61240 sim4_0.0.20121010.orig.tar.gz 31f9defba64d1068a9aecf1e39c9b7bf 317588 sim4_0.0.20121010-9.debian.tar.xz Dgit: 25824502d15fc61b2564f88a2ccb880878453ee5 debian archive/debian/0.0.20121010-9 https://git.dgit.debian.org/sim4 -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmjkHx0UHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdpYVxAAw/nreXJ1Fhdd5oZfJ3dYOKstaROZ iiJpgDAHQMVqP67KVQKdpT9hCW6Wh6skP2InXFUf7DSvAQjOwnkRYutwhW9nEn6h aavVHZ2njfX4EfiqOQSXp/3x/uDQCeXkwA0QcKUtTa/islp3/8zt3I1P+UBnHK9k 0aVJo5Q+pTE3ttkP4pwPNsiw9u7FXXq+Lk0zwN+tOgNSkDleJh6j3FnWOy3/pcxZ jMSvjcR4U8P493BTJAShnwzHbFqfEX8VO1lwQZYEIg4sj1iGDPDFg1zjfQhST+jE h4+RSHUHl7qze9r2nYN79VIuGBRAm28NEhxtF8HQsgU3zyfJqaNiEh4xhsQJjJC+ IBFB0Opa8t+o4KBMdmaHnqPwTs5BvitFl2xWNSecg//x9y1wYf6gFs9vaW88Znqu iy8gd7OsRzTd7MDlyZfLCzfIqvFrcYjidROGsThY7jmH5Xjxj6EdLe/ygcnAQKyn qJMHtv2ZlvavZ5VGz5jjgFjjHVyzoybloiwR+khFgFPoK7bsl0fg1XGwDbpvBDED K2PFreyft8xE0rZ7PGj1m6goYIX/pbENYEsuElA8P4tSh1cHUU/1qJ2tuukm7pFK zMtoWJijKFSfaJkDd3f5s7tNNgZIXjvN4x7D+3LCKayJPz0RGFBaO1aAJrmOW+mJ 4uT3lfcy0ysZwkE= =xmv7 -----END PGP SIGNATURE----- Sat Nov 1 07:13:14 UTC 2025 I: Checking whether the package is not for us Sat Nov 1 07:13:14 UTC 2025 I: Starting 1st build on remote node ionos15-amd64.debian.net. Sat Nov 1 07:13:14 UTC 2025 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Sat Nov 1 07:15:26 UTC 2025 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Dec 4 01:36:21 -12 2026 I: pbuilder-time-stamp: 1796391381 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [sim4_0.0.20121010-9.dsc] I: copying [./sim4_0.0.20121010.orig.tar.gz] I: copying [./sim4_0.0.20121010-9.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./sim4_0.0.20121010-9.dsc: no acceptable signature found dpkg-source: info: extracting sim4 in sim4-0.0.20121010 dpkg-source: info: unpacking sim4_0.0.20121010.orig.tar.gz dpkg-source: info: unpacking sim4_0.0.20121010-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying compilation_order.patch dpkg-source: info: applying rename-type-bool.patch dpkg-source: info: applying cppflags.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1994925/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='712d7c98adf64a6ca1e59d1173bcea53' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1994925' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.PrxlNACc/pbuilderrc_wgST --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.PrxlNACc/b1 --logfile b1/build.log sim4_0.0.20121010-9.dsc' SUDO_GID='111' SUDO_HOME='/var/lib/jenkins' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1994925/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19869 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 11.3 MB of archives. After unpacking 42.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.2-4 [98.5 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-2 [325 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 automake all 1:1.18.1-2 [877 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.28 [92.4 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-7 [540 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 21 [12.2 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 22 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.6+dfsg-0.1 [651 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 debhelper all 13.28 [941 kB] Fetched 11.3 MB in 0s (64.7 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19869 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2+b1_amd64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41.2-4_amd64.deb ... Unpacking bsdextrautils (2.41.2-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.20-2_amd64.deb ... Unpacking m4 (1.4.20-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.18.1-2_all.deb ... Unpacking automake (1:1.18.1-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.28_all.deb ... Unpacking libdebhelper-perl (13.28) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-7_all.deb ... Unpacking libtool (2.5.4-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_21_all.deb ... Unpacking dh-autoreconf (21) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.193-3_amd64.deb ... Unpacking libelf1t64:amd64 (0.193-3) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.16-2_amd64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../24-libxml2-16_2.14.6+dfsg-0.1_amd64.deb ... Unpacking libxml2-16:amd64 (2.14.6+dfsg-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2+b1_amd64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.28_all.deb ... Unpacking debhelper (13.28) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41.2-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.6+dfsg-0.1) ... Setting up libdebhelper-perl (13.28) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-2) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.193-3) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up automake (1:1.18.1-2) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.28) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.2-1). Solving dependencies... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/sim4-0.0.20121010/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../sim4_0.0.20121010-9_source.changes dpkg-buildpackage: info: source package sim4 dpkg-buildpackage: info: source version 0.0.20121010-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j42 clean make[1]: Entering directory '/build/reproducible-path/sim4-0.0.20121010' rm -f sim4 *.o make[1]: Leaving directory '/build/reproducible-path/sim4-0.0.20121010' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j42 INSTALL="install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/sim4-0.0.20121010' cc -Wdate-time -D_FORTIFY_SOURCE=2 -o sim4 -I. -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sim4-0.0.20121010=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Wall `LC_ALL=C ls *.c` -lm -Wl,-z,relro -Wl,-z,now Xtend1.c:12:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 12 | static const char rcsid[] = | ^~~~~ align.c:13:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 13 | static const char rcsid[] = | ^~~~~ align.c: In function 'align_path': align.c:250:13: warning: 'head2' may be used uninitialized [-Wmaybe-uninitialized] 250 | if (head2) *tail = tail2; | ^~~~~ align.c:27:38: note: 'head2' declared here 27 | edit_script *head1, *tail1, *head2, *tail2; | ^~~~~ args.c:7:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 7 | static const char rcsid[] = | ^~~~~ discrim.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = | ^~~~~ dna.c:9:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 9 | static const char rcsid[] = | ^~~~~ encoding.c:52:20: warning: 'osx_linker_bug' defined but not used [-Wunused-variable] 52 | static const char *osx_linker_bug = ""; | ^~~~~~~~~~~~~~ encoding.c:3:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 3 | static const char rcsid[] = | ^~~~~ misc.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ poly.c: In function 'remove_polyA_back': poly.c:108:29: warning: variable 'prev' set but not used [-Wunused-but-set-variable] 108 | Exon *t, *exons_tail, *prev; /* start from Lblock */ | ^~~~ poly.c: At top level: poly.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = "$Id: poly.c,v 1.5 2002/03/03 23:29:48 florea Exp $"; | ^~~~~ prnt.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = | ^~~~~ seq.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ seq_read.c:9:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 9 | static const char rcsid[] = | ^~~~~ sim4.init.c: In function 'cds_range': sim4.init.c:672:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 672 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^~ sim4.init.c:672:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 672 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^ sim4.init.c:673:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 673 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^~ sim4.init.c:673:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 673 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^ sim4.init.c: At top level: sim4.init.c:61:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 61 | static const char rcsid[] = | ^~~~~ sim4b1.c: In function 'heapify': sim4b1.c:1075:13: warning: old-style function definition [-Wold-style-definition] 1075 | static void heapify(i, last) | ^~~~~~~ sim4b1.c: In function 'smaller': sim4b1.c:1097:12: warning: old-style function definition [-Wold-style-definition] 1097 | static int smaller(i, j) | ^~~~~~~ sim4b1.c: In function 'find_ends': sim4b1.c:1523:27: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1523 | if (j>=j0) return (i-(j-j0)); break; | ^~ sim4b1.c:1523:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1523 | if (j>=j0) return (i-(j-j0)); break; | ^~~~~ sim4b1.c: At top level: sim4b1.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ In file included from /usr/include/stdio.h:970, from sim4b1.c:12: In function 'printf', inlined from 'print_pipmaker_exons' at sim4b1.c:1386:11: /usr/include/x86_64-linux-gnu/bits/stdio2.h:118:10: warning: 'From' may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sim4b1.c: In function 'print_pipmaker_exons': sim4b1.c:1307:8: note: 'From' was declared here 1307 | int From, To, cov, ori; | ^~~~ In function 'printf', inlined from 'print_pipmaker_exons' at sim4b1.c:1386:11: /usr/include/x86_64-linux-gnu/bits/stdio2.h:118:10: warning: 'To' may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sim4b1.c: In function 'print_pipmaker_exons': sim4b1.c:1307:14: note: 'To' was declared here 1307 | int From, To, cov, ori; | ^~ splice.c: In function 'splice': splice.c:45:67: warning: variable 'keep_Gi' set but not used [-Wunused-but-set-variable] 45 | int maxCscore, maxGscore, Gxs, Gxe, Gy, Cxs, Cxe, Cy, keep_Ci, keep_Gi; | ^~~~~~~ splice.c:45:58: warning: variable 'keep_Ci' set but not used [-Wunused-but-set-variable] 45 | int maxCscore, maxGscore, Gxs, Gxe, Gy, Cxs, Cxe, Cy, keep_Ci, keep_Gi; | ^~~~~~~ splice.c: At top level: splice.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ make[1]: Leaving directory '/build/reproducible-path/sim4-0.0.20121010' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install --destdir=debian/sim4/ dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'sim4' in '../sim4_0.0.20121010-9_amd64.deb'. dpkg-deb: building package 'sim4-dbgsym' in '../sim4-dbgsym_0.0.20121010-9_amd64.deb'. dpkg-genbuildinfo --build=binary -O../sim4_0.0.20121010-9_amd64.buildinfo dpkg-genchanges --build=binary -O../sim4_0.0.20121010-9_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1994925 and its subdirectories I: Current time: Fri Dec 4 01:38:24 -12 2026 I: pbuilder-time-stamp: 1796391504 Sat Nov 1 07:15:26 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Sat Nov 1 07:15:26 UTC 2025 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Sat Nov 1 07:16:16 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Sat Nov 1 07:16:16 UTC 2025 I: sim4_0.0.20121010-9_amd64.changes: Format: 1.8 Date: Mon, 06 Oct 2025 21:48:07 +0200 Source: sim4 Binary: sim4 sim4-dbgsym Architecture: amd64 Version: 0.0.20121010-9 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: sim4 - tool for aligning cDNA and genomic DNA Closes: 1097885 Changes: sim4 (0.0.20121010-9) unstable; urgency=medium . * Team upload. * rename-type-bool.patch: new: fix build failure. (Closes: #1097885) * d/copyright: remove the old fsf address. * d/watch: convert to version 5 watch file. This change also adjusts the scanner for a working https page. * d/control: declare compliance to standards version 4.7.2. * d/control: drop redundant Rules-Requires-Root: no. * cppflags.patch: new: propagate more hardening flags. * d/rules: activate hardening support. Checksums-Sha1: 35ff68868cadee99eaf5259dd86767869856b078 120600 sim4-dbgsym_0.0.20121010-9_amd64.deb a15888cb88bc10828a062e08838b43fbae8cf776 4785 sim4_0.0.20121010-9_amd64.buildinfo 8fc19d671442b84dc4a492342f11b3bdf925fdf7 361932 sim4_0.0.20121010-9_amd64.deb Checksums-Sha256: 46ed4c160a5c86de96fccd0a16c0fc84a7ebc206200d27880b7f4d9b3c4e489b 120600 sim4-dbgsym_0.0.20121010-9_amd64.deb e5c7afce11fdcf919f657ea343c77f9a16214fd72d1a970bb34a05fa1ba48503 4785 sim4_0.0.20121010-9_amd64.buildinfo ba4df11eb15f0aadcb9ae8845cca0820dd675a2debe4e0393dc16b5915e882e7 361932 sim4_0.0.20121010-9_amd64.deb Files: af24c218288b45d6ca64c69f6ea7c470 120600 debug optional sim4-dbgsym_0.0.20121010-9_amd64.deb bde7b9db5ce4b3d5c9a16e9adcb09181 4785 science optional sim4_0.0.20121010-9_amd64.buildinfo 123aa12b4d6bc8b7456acf239aba8534 361932 science optional sim4_0.0.20121010-9_amd64.deb Sat Nov 1 07:16:17 UTC 2025 I: diffoscope 307 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_20-72049.service; invocation ID: a679c21e5d544941a49f197f7d5d7489 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.PrxlNACc/sim4_0.0.20121010-9.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.PrxlNACc/sim4_0.0.20121010-9.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.PrxlNACc/sim4_0.0.20121010-9.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.PrxlNACc/b1/sim4_0.0.20121010-9_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.PrxlNACc/b2/sim4_0.0.20121010-9_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 233ms CPU time consumed: 189ms Memory peak: 17.7M (swap: 0B) Sat Nov 1 07:16:17 UTC 2025 I: diffoscope 307 found no differences in the changes files, and a .buildinfo file also exists. Sat Nov 1 07:16:17 UTC 2025 I: sim4 from forky built successfully and reproducibly on amd64. Sat Nov 1 07:16:18 UTC 2025 I: Removing signed sim4_0.0.20121010-9_amd64.buildinfo.asc files: removed './b1/sim4_0.0.20121010-9_amd64.buildinfo.asc' removed './b2/sim4_0.0.20121010-9_amd64.buildinfo.asc'