Thu Sep 25 14:21:31 UTC 2025 I: starting to build examl/forky/arm64 on jenkins on '2025-09-25 14:21' Thu Sep 25 14:21:31 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_9/101206/console.log Thu Sep 25 14:21:31 UTC 2025 I: Downloading source for forky/examl=3.0.22-6 --2025-09-25 14:21:31-- http://deb.debian.org/debian/pool/main/e/examl/examl_3.0.22-6.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2169 (2.1K) [text/prs.lines.tag] Saving to: ‘examl_3.0.22-6.dsc’ 0K .. 100% 42.8M=0s 2025-09-25 14:21:31 (42.8 MB/s) - ‘examl_3.0.22-6.dsc’ saved [2169/2169] Thu Sep 25 14:21:31 UTC 2025 I: examl_3.0.22-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: examl Binary: examl Architecture: any Version: 3.0.22-6 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: https://github.com/stamatak/ExaML Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/examl Vcs-Git: https://salsa.debian.org/med-team/examl.git Testsuite: autopkgtest Testsuite-Triggers: pocl-opencl-icd Build-Depends: debhelper-compat (= 13), mpi-default-dev, libsimde-dev, debhelper Package-List: examl deb science optional arch=any Checksums-Sha1: fe8373864ad1825b8eab7c76317090bfc2a180f6 941388 examl_3.0.22.orig.tar.gz 2eb4eb55b5776b859bfd608cb3b1a54e02a29453 27400 examl_3.0.22-6.debian.tar.xz Checksums-Sha256: 802e673b0c2ea83fdbe6b060048d83f22b6978933a04be64fb9b4334fe318ca3 941388 examl_3.0.22.orig.tar.gz fb9f88cb18b9432cc189ede0992814a8e7fefc23be08c424dd493d45516ad8a2 27400 examl_3.0.22-6.debian.tar.xz Files: ad62d8c333cee316732c10f719c1e87c 941388 examl_3.0.22.orig.tar.gz 7600ccaf1fc6adee79b9d8ba1faa4019 27400 examl_3.0.22-6.debian.tar.xz Dgit: cf67f7995c7fce580d5d74e407dcee5ea5413d58 debian archive/debian/3.0.22-6 https://git.dgit.debian.org/examl -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmcvTCQUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdpEHxAAwqb7CQ0/HWpREPdDMMoApeBgVEON K6LrwFYlJ59HboiZANie9VLebOyde00XU4mFo+sShgpviXNzUNbQPttKC+HOO6B7 E4j+7ZboT6tNVlCQ+9SZy7DssvXGzA30DKxVZtpEo2ETdr1Rbt8JvARZKH9auB7z 01g40Iopb+WXqmQuDajeBRuXdUehRKf8uKGEZsmxZ+d++JzLE/kfVRtIs6N/H+L3 S/uuPNu7Y0uYtz66R/NxXnc2ggHW2cF8Ixy0gLwE85LPf37ajanW1mIVTfzyxUVT pfNKsaDHP9woRQ02e3cmrG5gHqXGLTUBo6Aw2tzHo0RNvIFz3km8ijVwYgGAAaQp 9gCM4RuUDrV/P7ipOeDP6IV1W5okZrvKWfYxWakux+EDGgac5b2TKqVlkn+xsjfa Z/+phiOJDfJTa/JnezjvqBmPgwXCKuznCy2AdkehkZ0gJWOJ3ijMEHqPbzqEwq2M M2/S1RJ4ZLghHelbT/VmX+aDng1sKHub7uHolBvMT3wDJiiYsaEPRcIJmsl86pFJ Ybdis6QRNsKlx/CAdWSsd0u3BV0RJEqMf8qwYpx8K6IdufFibudQxcgGgAGNOQE4 N/5Zjr6dFdfkxc5xguJCozkALphziXyra43nU3u0Jt7k2VJzPX+XQu4rTOfz1INq gLdPIDXeEYn0Rvg= =YC// -----END PGP SIGNATURE----- Thu Sep 25 14:21:31 UTC 2025 I: Checking whether the package is not for us Thu Sep 25 14:21:31 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Thu Sep 25 14:21:31 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Thu Sep 25 14:23:13 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Sep 25 02:21:32 -12 2025 I: pbuilder-time-stamp: 1758810092 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [examl_3.0.22-6.dsc] I: copying [./examl_3.0.22.orig.tar.gz] I: copying [./examl_3.0.22-6.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./examl_3.0.22-6.dsc: no acceptable signature found dpkg-source: info: extracting examl in examl-3.0.22 dpkg-source: info: unpacking examl_3.0.22.orig.tar.gz dpkg-source: info: unpacking examl_3.0.22-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying simde dpkg-source: info: applying fix_implicit_declaration.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/354042/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='57d17ade945942f3ae8102622e502164' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='354042' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rDEVpkjd/pbuilderrc_vxma --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rDEVpkjd/b1 --logfile b1/build.log examl_3.0.22-6.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/354042/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), mpi-default-dev, libsimde-dev, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran-15{a} gfortran-15-aarch64-linux-gnu{a} groff-base{a} ibverbs-providers{a} intltool-debian{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libcbor0.10{a} libcom-err2{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libfabric1{a} libffi8{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-15-dev{a} libgfortran5{a} libgssapi-krb5-2{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libjs-jquery{a} libjs-jquery-ui{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi40{a} libpciaccess0{a} libpipeline1{a} libpmix2t64{a} librdmacm1t64{a} libsimde-dev{a} libtool{a} libuchardet0{a} libucx0{a} libunistring5{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2-16{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} mpi-default-dev{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libmail-sendmail-perl lynx wget xauth 0 packages upgraded, 98 newly installed, 0 to remove and 0 not upgraded. Need to get 153 MB of archives. After unpacking 698 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.1-3 [98.1 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 libedit2 arm64 3.1-20250104-1 [89.3 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 libcbor0.10 arm64 0.10.2-2 [27.4 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 libfido2-1 arm64 1.16.0-2 [74.4 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 18 http://deb.debian.org/debian forky/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 openssh-client arm64 1:10.0p1-8 [925 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-1 [316 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 automake all 1:1.17-4 [862 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.26 [91.8 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-5 [540 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 32 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.5+dfsg-0.2 [582 kB] Get: 36 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 debhelper all 13.26 [939 kB] Get: 40 http://deb.debian.org/debian forky/main arm64 libgfortran5 arm64 15.2.0-4 [371 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 libgfortran-15-dev arm64 15.2.0-4 [411 kB] Get: 42 http://deb.debian.org/debian forky/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-4 [76.9 MB] Get: 43 http://deb.debian.org/debian forky/main arm64 gfortran-15 arm64 15.2.0-4 [17.9 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 libnl-3-200 arm64 3.11.0-2 [57.9 kB] Get: 45 http://deb.debian.org/debian forky/main arm64 libnl-route-3-200 arm64 3.11.0-2 [176 kB] Get: 46 http://deb.debian.org/debian forky/main arm64 libibverbs1 arm64 56.1-1+b1 [59.8 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 ibverbs-providers arm64 56.1-1+b1 [338 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 libllvm17t64 arm64 1:17.0.6-22+b3 [21.3 MB] Get: 51 http://deb.debian.org/debian forky/main arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3+b2 [12.1 MB] Get: 52 http://deb.debian.org/debian forky/main arm64 libdrm-common all 2.4.125-2 [8576 B] Get: 53 http://deb.debian.org/debian forky/main arm64 libdrm2 arm64 2.4.125-2 [38.4 kB] Get: 54 http://deb.debian.org/debian forky/main arm64 libdrm-amdgpu1 arm64 2.4.125-2 [22.3 kB] Get: 55 http://deb.debian.org/debian forky/main arm64 libnuma1 arm64 2.0.19-1 [21.6 kB] Get: 56 http://deb.debian.org/debian forky/main arm64 libhsakmt1 arm64 6.2.4+ds-1 [58.3 kB] Get: 57 http://deb.debian.org/debian forky/main arm64 libhsa-runtime64-1 arm64 6.1.2-3 [302 kB] Get: 58 http://deb.debian.org/debian forky/main arm64 libamdhip64-5 arm64 5.7.1-6 [8824 kB] Get: 59 http://deb.debian.org/debian forky/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Get: 60 http://deb.debian.org/debian forky/main arm64 libevent-core-2.1-7t64 arm64 2.1.12-stable-10+b1 [126 kB] Get: 61 http://deb.debian.org/debian forky/main arm64 libevent-extra-2.1-7t64 arm64 2.1.12-stable-10+b1 [102 kB] Get: 62 http://deb.debian.org/debian forky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10+b1 [54.4 kB] Get: 63 http://deb.debian.org/debian forky/main arm64 libevent-openssl-2.1-7t64 arm64 2.1.12-stable-10+b1 [60.4 kB] Get: 64 http://deb.debian.org/debian forky/main arm64 libevent-dev arm64 2.1.12-stable-10+b1 [304 kB] Get: 65 http://deb.debian.org/debian forky/main arm64 librdmacm1t64 arm64 56.1-1+b1 [67.9 kB] Get: 66 http://deb.debian.org/debian forky/main arm64 libfabric1 arm64 2.1.0-1.1 [548 kB] Get: 67 http://deb.debian.org/debian forky/main arm64 libhwloc15 arm64 2.12.2-1 [142 kB] Get: 68 http://deb.debian.org/debian forky/main arm64 libnuma-dev arm64 2.0.19-1 [37.6 kB] Get: 69 http://deb.debian.org/debian forky/main arm64 libltdl7 arm64 2.5.4-5 [415 kB] Get: 70 http://deb.debian.org/debian forky/main arm64 libltdl-dev arm64 2.5.4-5 [168 kB] Get: 71 http://deb.debian.org/debian forky/main arm64 libhwloc-dev arm64 2.12.2-1 [239 kB] Get: 72 http://deb.debian.org/debian forky/main arm64 libpciaccess0 arm64 0.17-3+b3 [51.2 kB] Get: 73 http://deb.debian.org/debian forky/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 74 http://deb.debian.org/debian forky/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Get: 75 http://deb.debian.org/debian forky/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 76 http://deb.debian.org/debian forky/main arm64 libx11-data all 2:1.8.12-1 [343 kB] Get: 77 http://deb.debian.org/debian forky/main arm64 libx11-6 arm64 2:1.8.12-1 [795 kB] Get: 78 http://deb.debian.org/debian forky/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB] Get: 79 http://deb.debian.org/debian forky/main arm64 libxnvctrl0 arm64 535.171.04-1+b2 [14.0 kB] Get: 80 http://deb.debian.org/debian forky/main arm64 ocl-icd-libopencl1 arm64 2.3.3-1 [42.7 kB] Get: 81 http://deb.debian.org/debian forky/main arm64 libhwloc-plugins arm64 2.12.2-1 [18.1 kB] Get: 82 http://deb.debian.org/debian forky/main arm64 libibumad3 arm64 56.1-1+b1 [29.3 kB] Get: 83 http://deb.debian.org/debian forky/main arm64 libibmad5 arm64 56.1-1+b1 [42.8 kB] Get: 84 http://deb.debian.org/debian forky/main arm64 libnl-3-dev arm64 3.11.0-2 [104 kB] Get: 85 http://deb.debian.org/debian forky/main arm64 libnl-route-3-dev arm64 3.11.0-2 [210 kB] Get: 86 http://deb.debian.org/debian forky/main arm64 libibverbs-dev arm64 56.1-1+b1 [649 kB] Get: 87 http://deb.debian.org/debian forky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 88 http://deb.debian.org/debian forky/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 89 http://deb.debian.org/debian forky/main arm64 libmunge2 arm64 0.5.16-1 [19.2 kB] Get: 90 http://deb.debian.org/debian forky/main arm64 libpmix2t64 arm64 6.0.0+really5.0.8-1 [574 kB] Get: 91 http://deb.debian.org/debian forky/main arm64 libucx0 arm64 1.19.0+ds-1 [1081 kB] Get: 92 http://deb.debian.org/debian forky/main arm64 libopenmpi40 arm64 5.0.8-10+b1 [2104 kB] Get: 93 http://deb.debian.org/debian forky/main arm64 openmpi-common all 5.0.8-10 [97.5 kB] Get: 94 http://deb.debian.org/debian forky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 95 http://deb.debian.org/debian forky/main arm64 openmpi-bin arm64 5.0.8-10+b1 [184 kB] Get: 96 http://deb.debian.org/debian forky/main arm64 libopenmpi-dev arm64 5.0.8-10+b1 [1090 kB] Get: 97 http://deb.debian.org/debian forky/main arm64 libsimde-dev all 0.8.2-3 [467 kB] Get: 98 http://deb.debian.org/debian forky/main arm64 mpi-default-dev arm64 1.18 [3372 B] Fetched 153 MB in 1s (165 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. 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Setting up libxml2-16:arm64 (2.14.5+dfsg-0.2) ... Setting up libdebhelper-perl (13.26) ... Setting up libedit2:arm64 (3.1-20250104-1) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up libibumad3:arm64 (56.1-1+b1) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-1) ... Setting up libevent-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up libibmad5:arm64 (56.1-1+b1) ... Setting up libcom-err2:arm64 (1.47.2-3+b3) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.193-3) ... Setting up libkrb5support0:arm64 (1.21.3-5) ... Setting up autotools-dev (20240727.1) ... Setting up libz3-4:arm64 (4.13.3-1) ... Setting up libmunge2:arm64 (0.5.16-1) ... Setting up libx11-data (2:1.8.12-1) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up libhwloc15:arm64 (2.12.2-1) ... Setting up autopoint (0.23.1-2) ... Setting up libk5crypto3:arm64 (1.21.3-5) ... Setting up libltdl7:arm64 (2.5.4-5) ... Setting up libgfortran5:arm64 (15.2.0-4) ... Setting up autoconf (2.72-3.1) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libffi8:arm64 (3.5.2-2) ... Setting up libnuma1:arm64 (2.0.19-1) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up ocl-icd-libopencl1:arm64 (2.3.3-1) ... Setting up libuchardet0:arm64 (0.0.8-2) ... Setting up libnl-3-200:arm64 (3.11.0-2) ... Setting up openmpi-common (5.0.8-10) ... Setting up libx11-6:arm64 (2:1.8.12-1) ... Setting up libkrb5-3:arm64 (1.21.3-5) ... Setting up libevent-core-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:arm64 (1.16.0-2) ... Setting up libdrm-common (2.4.125-2) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up libevent-openssl-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up libxext6:arm64 (2:1.3.4-1+b3) ... Setting up libgfortran-15-dev:arm64 (15.2.0-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:arm64 (2.0.19-1) ... Setting up libnl-route-3-200:arm64 (3.11.0-2) ... Setting up libxnvctrl0:arm64 (535.171.04-1+b2) ... Setting up dh-autoreconf (21) ... Setting up libltdl-dev:arm64 (2.5.4-5) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libllvm17t64:arm64 (1:17.0.6-22+b3) ... Setting up gfortran-15-aarch64-linux-gnu (15.2.0-4) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ... Setting up libevent-extra-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up libdrm2:arm64 (2.4.125-2) ... Setting up libnl-3-dev:arm64 (3.11.0-2) ... Setting up groff-base (1.23.0-9) ... Setting up libhwloc-dev:arm64 (2.12.2-1) ... Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up gfortran-15 (15.2.0-4) ... Setting up libdrm-amdgpu1:arm64 (2.4.125-2) ... Setting up libibverbs1:arm64 (56.1-1+b1) ... Setting up ibverbs-providers:arm64 (56.1-1+b1) ... Setting up openssh-client (1:10.0p1-8) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhwloc-plugins:arm64 (2.12.2-1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnl-route-3-dev:arm64 (3.11.0-2) ... Setting up libevent-dev (2.1.12-stable-10+b1) ... Setting up libpmix2t64:arm64 (6.0.0+really5.0.8-1) ... Setting up librdmacm1t64:arm64 (56.1-1+b1) ... Setting up libhsakmt1:arm64 (6.2.4+ds-1) ... Setting up libfabric1:arm64 (2.1.0-1.1) ... Setting up debhelper (13.26) ... Setting up libibverbs-dev:arm64 (56.1-1+b1) ... Setting up libhsa-runtime64-1:arm64 (6.1.2-3) ... Setting up libamdhip64-5:arm64 (5.7.1-6) ... Setting up libucx0:arm64 (1.19.0+ds-1) ... Setting up libopenmpi40:arm64 (5.0.8-10+b1) ... Setting up openmpi-bin (5.0.8-10+b1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev:arm64 (5.0.8-10+b1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up mpi-default-dev (1.18) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/examl-3.0.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../examl_3.0.22-6_source.changes dpkg-buildpackage: info: source package examl dpkg-buildpackage: info: source version 3.0.22-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --sourcedirectory=examl debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/examl-3.0.22' dh_auto_clean /usr/bin/make --directory=parser -f Makefile.SSE3.gcc clean make[2]: Entering directory '/build/reproducible-path/examl-3.0.22/parser' rm -f *.o parse-examl"" make[2]: Leaving directory '/build/reproducible-path/examl-3.0.22/parser' find examl -executable -type f -delete make[1]: Leaving directory '/build/reproducible-path/examl-3.0.22' dh_autoreconf_clean -O--sourcedirectory=examl dh_clean -O--sourcedirectory=examl debian/rules binary dh binary --sourcedirectory=examl dh_update_autotools_config -O--sourcedirectory=examl dh_autoreconf -O--sourcedirectory=examl dh_auto_configure -O--sourcedirectory=examl debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/examl-3.0.22' dh_auto_build /usr/bin/make --directory=examl -f Makefile.AVX.gcc make[2]: Entering directory '/build/reproducible-path/examl-3.0.22/examl' rm -f *.o examl"" mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o axml.o axml.c In function ‘initializePartitions’, inlined from ‘initializeTree’ at axml.c:2217:3, inlined from ‘main’ at axml.c:2631:5: axml.c:2121:40: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 2121 | *modelWeights = (unsigned long*) calloc(tr->NumberOfModels, sizeof(unsigned long)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from axml.c:44: /usr/include/stdlib.h: In function ‘main’: /usr/include/stdlib.h:675:14: note: in a call to allocation function ‘calloc’ declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o optimizeModel.o optimizeModel.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o trash.o trash.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o searchAlgo.o searchAlgo.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o topologies.o topologies.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o treeIO.o treeIO.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o models.o models.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o evaluatePartialGenericSpecial.o evaluatePartialGenericSpecial.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o evaluateGenericSpecial.o evaluateGenericSpecial.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o newviewGenericSpecial.o newviewGenericSpecial.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o makenewzGenericSpecial.o makenewzGenericSpecial.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bipartitionList.o bipartitionList.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o restartHashTable.o restartHashTable.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o avxLikelihood.o avxLikelihood.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o byteFile.o byteFile.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o partitionAssignment.o partitionAssignment.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o communication.o communication.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o quartets.o quartets.c mpicc -o examl"" axml.o optimizeModel.o trash.o searchAlgo.o topologies.o treeIO.o models.o evaluatePartialGenericSpecial.o evaluateGenericSpecial.o newviewGenericSpecial.o makenewzGenericSpecial.o bipartitionList.o restartHashTable.o avxLikelihood.o byteFile.o partitionAssignment.o communication.o quartets.o -lm -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/examl-3.0.22/examl' /usr/bin/make --directory=examl -f Makefile.OMP.AVX.gcc make[2]: Entering directory '/build/reproducible-path/examl-3.0.22/examl' mpicc -o examl-OMP"" axml.o optimizeModel.o trash.o searchAlgo.o topologies.o treeIO.o models.o evaluatePartialGenericSpecial.o evaluateGenericSpecial.o newviewGenericSpecial.o makenewzGenericSpecial.o bipartitionList.o restartHashTable.o avxLikelihood.o byteFile.o partitionAssignment.o communication.o quartets.o -lm -fopenmp -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/examl-3.0.22/examl' /usr/bin/make --directory=parser -f Makefile.SSE3.gcc make[2]: Entering directory '/build/reproducible-path/examl-3.0.22/parser' rm -f *.o parse-examl"" gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fomit-frame-pointer -O2 -D_GNU_SOURCE -funroll-loops -Wall -Wunused-parameter -Wredundant-decls -Wreturn-type -Wswitch-default -Wunused-value -Wimplicit -Wimplicit-function-declaration -Wimplicit-int -Wimport -Wunused -Wunused-function -Wunused-label -Wno-int-to-pointer-cast -Wbad-function-cast -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wold-style-definition -Wstrict-prototypes -Wpointer-sign -Wextra -Wredundant-decls -Wunused -Wunused-function -Wunused-parameter -Wunused-value -Wunused-variable -Wformat -Wformat-nonliteral -Wparentheses -Wsequence-point -Wuninitialized -Wundef -Wbad-function-cast -Wdate-time -D_FORTIFY_SOURCE=2 -c -o axml.o axml.c axml.c: In function ‘genericBaseFrequencies’: axml.c:2509:26: warning: comparison is always true due to limited range of data type [-Wtype-limits] 2509 | if(yptr[j] >= 0 && yptr[j] < 20) | ^~ gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fomit-frame-pointer -O2 -D_GNU_SOURCE -funroll-loops -Wall -Wunused-parameter -Wredundant-decls -Wreturn-type -Wswitch-default -Wunused-value -Wimplicit -Wimplicit-function-declaration -Wimplicit-int -Wimport -Wunused -Wunused-function -Wunused-label -Wno-int-to-pointer-cast -Wbad-function-cast -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wold-style-definition -Wstrict-prototypes -Wpointer-sign -Wextra -Wredundant-decls -Wunused -Wunused-function -Wunused-parameter -Wunused-value -Wunused-variable -Wformat -Wformat-nonliteral -Wparentheses -Wsequence-point -Wuninitialized -Wundef -Wbad-function-cast -Wdate-time -D_FORTIFY_SOURCE=2 -c -o parsePartitions.o parsePartitions.c gcc -o parse-examl"" axml.o parsePartitions.o -lm -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/examl-3.0.22/parser' make[1]: Leaving directory '/build/reproducible-path/examl-3.0.22' dh_auto_test -O--sourcedirectory=examl create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedirectory=examl dh_prep -O--sourcedirectory=examl debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/examl-3.0.22' dh_install examl/{examl,examl-OMP} parser/parse-examl /usr/bin/ make[1]: Leaving directory '/build/reproducible-path/examl-3.0.22' dh_installdocs -O--sourcedirectory=examl dh_installchangelogs -O--sourcedirectory=examl dh_installman -O--sourcedirectory=examl dh_installsystemduser -O--sourcedirectory=examl dh_perl -O--sourcedirectory=examl dh_link -O--sourcedirectory=examl dh_strip_nondeterminism -O--sourcedirectory=examl dh_compress -O--sourcedirectory=examl dh_fixperms -O--sourcedirectory=examl dh_missing -O--sourcedirectory=examl dh_dwz -a -O--sourcedirectory=examl dh_strip -a -O--sourcedirectory=examl dh_makeshlibs -a -O--sourcedirectory=examl dh_shlibdeps -a -O--sourcedirectory=examl dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -O--sourcedirectory=examl debian/rules override_dh_gencontrol make[1]: Entering directory '/build/reproducible-path/examl-3.0.22' dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.8.2-3), " make[1]: Leaving directory '/build/reproducible-path/examl-3.0.22' dh_md5sums -O--sourcedirectory=examl dh_builddeb -O--sourcedirectory=examl dpkg-deb: building package 'examl' in '../examl_3.0.22-6_arm64.deb'. dpkg-deb: building package 'examl-dbgsym' in '../examl-dbgsym_3.0.22-6_arm64.deb'. dpkg-genbuildinfo --build=binary -O../examl_3.0.22-6_arm64.buildinfo dpkg-genchanges --build=binary -O../examl_3.0.22-6_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/354042 and its subdirectories I: Current time: Thu Sep 25 02:23:13 -12 2025 I: pbuilder-time-stamp: 1758810193 Thu Sep 25 14:23:14 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Thu Sep 25 14:23:14 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Thu Sep 25 14:24:22 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Thu Sep 25 14:24:23 UTC 2025 I: examl_3.0.22-6_arm64.changes: Format: 1.8 Date: Sat, 09 Nov 2024 12:07:58 +0100 Source: examl Binary: examl examl-dbgsym Architecture: arm64 Version: 3.0.22-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: examl - Exascale Maximum Likelihood (ExaML) code for phylogenetic inferen Closes: 1084904 1086909 Changes: examl (3.0.22-6) unstable; urgency=medium . * d/control: migrate to mpi-default-* (Closes: #1084904, #1086909) * d/patches/*: normalize dep3 header, notably Last-Update timestamp. * d/control: add myself to uploaders. Checksums-Sha1: ea5bc975104e7cf375aa08bbcffaf57a0e8d2ea7 568776 examl-dbgsym_3.0.22-6_arm64.deb e297814f7b8578d68781ba4ebba3f6c87b3b5491 7183 examl_3.0.22-6_arm64.buildinfo bf1feec1e8c1d36278bd7fd8bc11c3a2f8051c8b 791348 examl_3.0.22-6_arm64.deb Checksums-Sha256: ddc4db2f57ed64d1ee9fbfd298b1908955e3a6d7adc5964039397a6511766d3e 568776 examl-dbgsym_3.0.22-6_arm64.deb 02f1cda3076317ba694a94f6b1ff383359d6c0b5c91b21fc0d59af51d5e8d38c 7183 examl_3.0.22-6_arm64.buildinfo afc1e7ce7a7de11fb34c8d7e2e60e449c3f2821b5aca84314d67d562d4191cd8 791348 examl_3.0.22-6_arm64.deb Files: df0e1f4cf90b9d592f56919ae510df3b 568776 debug optional examl-dbgsym_3.0.22-6_arm64.deb 2d9a63025f43df683ba8287240828cc8 7183 science optional examl_3.0.22-6_arm64.buildinfo cd77be0626216e36afddec99787f789c 791348 science optional examl_3.0.22-6_arm64.deb Thu Sep 25 14:24:23 UTC 2025 I: diffoscope 306 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_9-101206.service; invocation ID: 12261e40efed49c0b66c5f074d306808 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.rDEVpkjd/examl_3.0.22-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.rDEVpkjd/examl_3.0.22-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.rDEVpkjd/examl_3.0.22-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.rDEVpkjd/b1/examl_3.0.22-6_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.rDEVpkjd/b2/examl_3.0.22-6_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 209ms CPU time consumed: 168ms Memory peak: 17.8M (swap: 0B) Thu Sep 25 14:24:24 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Thu Sep 25 14:24:24 UTC 2025 I: examl from forky built successfully and reproducibly on arm64. Thu Sep 25 14:24:25 UTC 2025 I: Removing signed examl_3.0.22-6_arm64.buildinfo.asc files: removed './b1/examl_3.0.22-6_arm64.buildinfo.asc' removed './b2/examl_3.0.22-6_arm64.buildinfo.asc'