Mon Sep 22 14:37:36 UTC 2025 I: starting to build lastz/forky/arm64 on jenkins on '2025-09-22 14:37' Mon Sep 22 14:37:36 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_5/122380/console.log Mon Sep 22 14:37:36 UTC 2025 I: Downloading source for forky/lastz=1.04.52-1 --2025-09-22 14:37:36-- http://deb.debian.org/debian/pool/main/l/lastz/lastz_1.04.52-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2142 (2.1K) [text/prs.lines.tag] Saving to: ‘lastz_1.04.52-1.dsc’ 0K .. 100% 251M=0s 2025-09-22 14:37:36 (251 MB/s) - ‘lastz_1.04.52-1.dsc’ saved [2142/2142] Mon Sep 22 14:37:36 UTC 2025 I: lastz_1.04.52-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: lastz Binary: lastz, lastz-examples Architecture: any all Version: 1.04.52-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/lastz/lastz Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/lastz Vcs-Git: https://salsa.debian.org/med-team/lastz.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-python, python3 Package-List: lastz deb science optional arch=any lastz-examples deb science optional arch=all Checksums-Sha1: 1fab0b479447e8d42ddf33de2227b5b24287b9cd 8484391 lastz_1.04.52.orig.tar.gz aaf962996d5c063684372554140d42a388f1eed7 9908 lastz_1.04.52-1.debian.tar.xz Checksums-Sha256: 274bf0d774e3f4da87c23ca0b5cc4269f3dcaecf71a1c6289d426e24fbccf4c8 8484391 lastz_1.04.52.orig.tar.gz 2cb54c92bb48ef7a4d99e7ee73cc9f76d7d1c959f77ea3e1d0770b8bbc43d988 9908 lastz_1.04.52-1.debian.tar.xz Files: 9af787756db3c6517d3b015a7d59ecb7 8484391 lastz_1.04.52.orig.tar.gz 279f0fc10febeb31a72e5979e51a2c98 9908 lastz_1.04.52-1.debian.tar.xz Dgit: c56bc8a4e575daba8cac6c55eb96ed4f715cf0c6 debian archive/debian/1.04.52-1 https://git.dgit.debian.org/lastz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmjNw+IUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdoSVhAAoEG+aA+I8PiCMpQaG1okY46A+5be TkktW7CDpokuHj0rgf8ApmTiwgbRwTmjFxnDk4i6SQMUxTpXRTkvnNqYZKnsqslS 0s2VqVKAihpUEDSQGa8a5sxLmjqDZ4A1ubWh5k00mvK+XzwOvKAnhI6lBeVX/toz fGdOyh/7AeyOf+8s8MTTBLnIe/fv0+UUrOTiNN2CkjrrS6tNNoomkm+tBzJKaql0 lOSpalP1Y4QfTkPC2srDy4siEBr6PUQDtFSxG1O7uIYZ9mW20tgDWuHPp54l+sGP Pj+qQTwxrt1obDwxblZutnc/cGzF7pWAmAAGSYKcdi05Cdlv2d6v/A3OPITTrhCr UuzHpTKgZsLMHl54/AhbVc5PvUB2VmTfOIpgSik0f0yUHK/fdeDpAB2o47sXZVD7 gUj7TYWVBd8tj64YYPVidNCigELomRVZXgmSXd/O1hi9NSMT8ACZbndvl/C/i4kl itoLb9P6BD5vh+DnVio/+pakZi+MrWue6u+d0gm1HcgPxniYXDpJcLK++JpwxXyK L2G/4bBoXsSvIA+bqHMc8l0U1vhAvGmAcRynYCIFIpmTPs7R3ilk5snjvONSYnmG dBO1KdWMg0xov4sblO7jQIvZMALdfxGYDBuGl00/jJ6Pble0CJS414Jku4Yn5+AP DfGAnKmYD8q0CMg= =3Wga -----END PGP SIGNATURE----- Mon Sep 22 14:37:36 UTC 2025 I: Checking whether the package is not for us Mon Sep 22 14:37:36 UTC 2025 I: Starting 1st build on remote node codethink03-arm64.debian.net. Mon Sep 22 14:37:36 UTC 2025 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Mon Sep 22 14:38:53 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Oct 25 09:00:39 -12 2026 I: pbuilder-time-stamp: 1792962039 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [lastz_1.04.52-1.dsc] I: copying [./lastz_1.04.52.orig.tar.gz] I: copying [./lastz_1.04.52-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./lastz_1.04.52-1.dsc: no acceptable signature found dpkg-source: info: extracting lastz in lastz-1.04.52 dpkg-source: info: unpacking lastz_1.04.52.orig.tar.gz dpkg-source: info: unpacking lastz_1.04.52-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying propagate_cflags.patch dpkg-source: info: applying fix_signed_char.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying nullchar.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1014718/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='38ecedea16ee484a86112a6ccf6a85e7' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1014718' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cUoq768w/pbuilderrc_jbRz --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cUoq768w/b1 --logfile b1/build.log lastz_1.04.52-1.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.12.43+deb13-cloud-arm64 #1 SMP Debian 6.12.43-1 (2025-08-27) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1014718/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 44 newly installed, 0 to remove and 0 not upgraded. Need to get 17.3 MB of archives. After unpacking 72.4 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 libexpat1 arm64 2.7.2-1 [95.7 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libpython3.13-minimal arm64 3.13.7-1 [857 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 python3.13-minimal arm64 3.13.7-1 [2001 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 python3-minimal arm64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 libpython3.13-stdlib arm64 3.13.7-1 [1895 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 python3.13 arm64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 libpython3-stdlib arm64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 python3 arm64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.1-3 [98.1 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-1 [316 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 automake all 1:1.17-4 [862 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.26 [91.8 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-5 [540 kB] Get: 32 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 36 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.5+dfsg-0.2 [582 kB] Get: 40 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 42 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian forky/main arm64 debhelper all 13.26 [939 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 dh-python all 6.20250414 [116 kB] Fetched 17.3 MB in 0s (80.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.2-1_arm64.deb ... Unpacking libexpat1:arm64 (2.7.2-1) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.7-1_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.7-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.7-1_arm64.deb ... Unpacking python3.13-minimal (3.13.7-1) ... Setting up libpython3.13-minimal:arm64 (3.13.7-1) ... Setting up libexpat1:arm64 (2.7.2-1) ... Setting up python3.13-minimal (3.13.7-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20354 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.7-1_arm64.deb ... Unpacking python3-minimal (3.13.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-5_all.deb ... Unpacking tzdata (2025b-5) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../4-libffi8_3.5.2-2_arm64.deb ... Unpacking libffi8:arm64 (3.5.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.3-3_all.deb ... Unpacking readline-common (8.3-3) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../6-libreadline8t64_8.3-3_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_arm64.deb ... Unpacking python3.13 (3.13.7-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../9-libpython3-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.13.7-1) ... Setting up python3-minimal (3.13.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21369 files and directories currently installed.) Preparing to unpack .../00-python3_3.13.7-1_arm64.deb ... Unpacking python3 (3.13.7-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../03-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.23.1-2+b1_arm64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.8-2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.41.1-3_arm64.deb ... Unpacking bsdextrautils (2.41.1-3) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.20-1_arm64.deb ... Unpacking m4 (1.4.20-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.26_all.deb ... Unpacking libdebhelper-perl (13.26) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.5.4-5_all.deb ... Unpacking libtool (2.5.4-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_21_all.deb ... Unpacking dh-autoreconf (21) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../22-libelf1t64_0.193-3_arm64.deb ... Unpacking libelf1t64:arm64 (0.193-3) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.16-2_arm64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../24-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2-16:arm64. Preparing to unpack .../25-libxml2-16_2.14.5+dfsg-0.2_arm64.deb ... Unpacking libxml2-16:arm64 (2.14.5+dfsg-0.2) ... Selecting previously unselected package gettext. 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Setting up libdebhelper-perl (13.26) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-1) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.193-3) ... Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Oct 25 21:01:08 UTC 2026. Universal Time is now: Sun Oct 25 21:01:08 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up libffi8:arm64 (3.5.2-2) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:arm64 (0.0.8-2) ... Setting up netbase (6.5) ... Setting up readline-common (8.3-3) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up libreadline8t64:arm64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up libpython3.13-stdlib:arm64 (3.13.7-1) ... Setting up libpython3-stdlib:arm64 (3.13.7-1) ... Setting up python3.13 (3.13.7-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.7-1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-python (6.20250414) ... Setting up debhelper (13.26) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.2-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/lastz-1.04.52/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../lastz_1.04.52-1_source.changes dpkg-buildpackage: info: source package lastz dpkg-buildpackage: info: source version 1.04.52-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with python3 dh_auto_clean make -j12 clean make[1]: Entering directory '/build/reproducible-path/lastz-1.04.52' cd src && make clean make[2]: Entering directory '/build/reproducible-path/lastz-1.04.52/src' rm -f *.o rm -f lastz rm -f ../test_results/base_test*.* rm -f lastz_D rm -f lastz_32 rm -f lastz_40 make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.52/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.52' dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j12 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.52' cd src && make lastz lastz_D make[2]: Entering directory '/build/reproducible-path/lastz-1.04.52/src' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I lastz.c -o lastz.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I infer_scores.c -o infer_scores.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I seeds.c -o seeds.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I pos_table.c -o pos_table.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I quantum.c -o quantum.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I seed_search.c -o seed_search.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I diag_hash.c -o diag_hash.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I chain.c -o chain.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I gapped_extend.c -o gapped_extend.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I tweener.c -o tweener.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I masking.c -o masking.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I segment.c -o segment.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I edit_script.c -o edit_script.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I identity_dist.c -o identity_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I coverage_dist.c -o coverage_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I continuity_dist.c -o continuity_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I output.c -o output.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I gfa.c -o gfa.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I lav.c -o lav.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I axt.c -o axt.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I maf.c -o maf.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I cigar.c -o cigar.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I sam.c -o sam.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I genpaf.c -o genpaf.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I text_align.c -o text_align.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I align_diffs.c -o align_diffs.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I utilities.c -o utilities.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I dna_utilities.c -o dna_utilities.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I sequences.c -o sequences.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=I capsule.c -o capsule.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D lastz.c -o lastz_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D infer_scores.c -o infer_scores_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D seeds.c -o seeds_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D pos_table.c -o pos_table_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D quantum.c -o quantum_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D seed_search.c -o seed_search_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D diag_hash.c -o diag_hash_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D chain.c -o chain_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D gapped_extend.c -o gapped_extend_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D tweener.c -o tweener_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D masking.c -o masking_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D segment.c -o segment_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D edit_script.c -o edit_script_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D identity_dist.c -o identity_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D coverage_dist.c -o coverage_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D continuity_dist.c -o continuity_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D output.c -o output_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D gfa.c -o gfa_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D lav.c -o lav_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D axt.c -o axt_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D maf.c -o maf_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D cigar.c -o cigar_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D sam.c -o sam_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D genpaf.c -o genpaf_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D text_align.c -o text_align_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D align_diffs.c -o align_diffs_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D utilities.c -o utilities_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D dna_utilities.c -o dna_utilities_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D sequences.c -o sequences_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.52=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"52"\" -DREVISION_DATE="\"20250402"\" -DSUBVERSION_REV="\""\" -Dscore_type=D capsule.c -o capsule_D.o gcc -Wl,-z,relro -Wl,-z,now lastz.o infer_scores.o seeds.o pos_table.o quantum.o seed_search.o diag_hash.o chain.o gapped_extend.o tweener.o masking.o segment.o edit_script.o identity_dist.o coverage_dist.o continuity_dist.o output.o gfa.o lav.o axt.o maf.o cigar.o sam.o genpaf.o text_align.o align_diffs.o utilities.o dna_utilities.o sequences.o capsule.o -lm -o lastz gcc -Wl,-z,relro -Wl,-z,now lastz_D.o infer_scores_D.o seeds_D.o pos_table_D.o quantum_D.o seed_search_D.o diag_hash_D.o chain_D.o gapped_extend_D.o tweener_D.o masking_D.o segment_D.o edit_script_D.o identity_dist_D.o coverage_dist_D.o continuity_dist_D.o output_D.o gfa_D.o lav_D.o axt_D.o maf_D.o cigar_D.o sam_D.o genpaf_D.o text_align_D.o align_diffs_D.o utilities_D.o dna_utilities_D.o sequences_D.o capsule_D.o -lm -o lastz_D make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.52/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.52' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/lastz-1.04.52' /usr/bin/make base_tests make[2]: Entering directory '/build/reproducible-path/lastz-1.04.52' cd src && /usr/bin/make base_tests make[3]: Entering directory '/build/reproducible-path/lastz-1.04.52/src' SUCCESS: ../test_data/base_test.hits.lav and ../test_results/base_test.hits.lav are equivalent SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.hsp.lav are equivalent SUCCESS: ../test_data/base_test.adaptive_k.gfa and ../test_results/base_test.adaptive_k.gfa are equivalent SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.default.lav are equivalent SUCCESS: ../test_data/base_test.default.axt and ../test_results/base_test.default.axt are equivalent SUCCESS: ../test_data/base_test.chained.lav and ../test_results/base_test.chained.lav are equivalent SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.extended.lav are equivalent SUCCESS: ../test_data/base_test.interpolated.lav and ../test_results/base_test.interpolated.lav are equivalent SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.segments.lav are equivalent SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.stdin2.lav are equivalent SUCCESS: ../test_data/base_test.pig_cat.lav and ../test_results/base_test.2bit1.lav are equivalent SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.2bit2.lav are equivalent SUCCESS: ../test_data/base_test.float.lav and ../test_results/base_test.float.lav are equivalent SUCCESS: ../test_data/base_test.seeded.lav and ../test_results/base_test.seeded.lav are equivalent SUCCESS: ../test_data/base_test.hwseeded.lav and ../test_results/base_test.hwseeded.lav are equivalent SUCCESS: ../test_data/base_test.owseeded.gfa and ../test_results/base_test.owseeded.gfa are equivalent SUCCESS: ../test_data/base_test.masking.lav and ../test_results/base_test.masking.lav are equivalent SUCCESS: ../test_data/base_test.subrange.lav and ../test_results/base_test.subrange.lav are equivalent SUCCESS: ../test_data/base_test.mask.lav and ../test_results/base_test.mask.lav are equivalent make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.52/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.52' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/lastz-1.04.52' cd src && /usr/bin/make test make[3]: Entering directory '/build/reproducible-path/lastz-1.04.52/src' make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.52/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.52' /usr/bin/make clean_test make[2]: Entering directory '/build/reproducible-path/lastz-1.04.52' cd src && /usr/bin/make clean_tests make[3]: Entering directory '/build/reproducible-path/lastz-1.04.52/src' rm -f ../test_results/base_test*.* make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.52/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.52' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.52' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j12 install DESTDIR=/build/reproducible-path/lastz-1.04.52/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.52' cd src && make install make[2]: Entering directory '/build/reproducible-path/lastz-1.04.52/src' install --strip-program=true -d /build/reproducible-path/lastz-1.04.52/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true lastz /build/reproducible-path/lastz-1.04.52/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true lastz_D /build/reproducible-path/lastz-1.04.52/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.52/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.52' dh_install dh_installdocs dh_installchangelogs dh_installman dh_python3 dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package lastz-examples: substitution variable ${python3:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'lastz' in '../lastz_1.04.52-1_arm64.deb'. dpkg-deb: building package 'lastz-dbgsym' in '../lastz-dbgsym_1.04.52-1_arm64.deb'. dpkg-deb: building package 'lastz-examples' in '../lastz-examples_1.04.52-1_all.deb'. dpkg-genbuildinfo --build=binary -O../lastz_1.04.52-1_arm64.buildinfo dpkg-genchanges --build=binary -O../lastz_1.04.52-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1014718 and its subdirectories I: Current time: Sun Oct 25 09:01:43 -12 2026 I: pbuilder-time-stamp: 1792962103 Mon Sep 22 14:38:53 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net. Mon Sep 22 14:38:53 UTC 2025 I: Preparing to do remote build '2' on codethink04-arm64.debian.net. Mon Sep 22 14:40:43 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. Mon Sep 22 14:40:44 UTC 2025 I: lastz_1.04.52-1_arm64.changes: Format: 1.8 Date: Fri, 19 Sep 2025 22:45:39 +0200 Source: lastz Binary: lastz lastz-dbgsym lastz-examples Architecture: arm64 all Version: 1.04.52-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: lastz - pairwise aligning DNA sequences lastz-examples - pairwise aligning DNA sequences (examples and test scripts) Closes: 1097151 Changes: lastz (1.04.52-1) unstable; urgency=medium . * Team upload. * New upstream version 1.04.52 * d/patches/*: refresh following new upstream release. * nullchar.patch: new: fix build failure with gcc-15. (Closes: #1097151) * d/control: declare compliance to standards version 4.7.2. * d/patches/*: normalize Last-Update timestamp. * d/watch: move to v5 watch Github template. * d/control: drop Rules-Requires-Root: this is now default. Checksums-Sha1: 7346ba9f850275d5607e364ee1f654ec530e8b93 1137304 lastz-dbgsym_1.04.52-1_arm64.deb 1f0ea9dcc918b50b932651746d253e3b7c19560a 4372152 lastz-examples_1.04.52-1_all.deb dc03dd8cc86cdaf462e20d47c9c7417640d9a7d9 5550 lastz_1.04.52-1_arm64.buildinfo f85645cebeabc83ecabfbac52ef26246d9e00ed5 494648 lastz_1.04.52-1_arm64.deb Checksums-Sha256: c7808c40c208a27a5ecd6230c296328d33e2d134197be36bcc4f3633114ca580 1137304 lastz-dbgsym_1.04.52-1_arm64.deb b7ab7f360693e2705ab0e47c3fc000611a52f1dd9067f2882c057bf12eeb8267 4372152 lastz-examples_1.04.52-1_all.deb dc0717fb8a1acc527581a49e5c12ffe0fbc8afc1eb2d9fca769d1d2fc727f672 5550 lastz_1.04.52-1_arm64.buildinfo a1abdb7fa36dc58861432e2eb3415d030e090072192231f7c34bbdfb868300f7 494648 lastz_1.04.52-1_arm64.deb Files: 34f15a30641cc9873291c2fa472527ff 1137304 debug optional lastz-dbgsym_1.04.52-1_arm64.deb 883bc21d1d3ba0f5064ab74665cff538 4372152 science optional lastz-examples_1.04.52-1_all.deb 3145b803ec408825f497569b41cbfa37 5550 science optional lastz_1.04.52-1_arm64.buildinfo d105a4c482907aa86b92f8896a834981 494648 science optional lastz_1.04.52-1_arm64.deb Mon Sep 22 14:40:45 UTC 2025 I: diffoscope 306 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_5-122380.service; invocation ID: 218fb6cd109441218a8596e5806dbfc6 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.cUoq768w/lastz_1.04.52-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.cUoq768w/lastz_1.04.52-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.cUoq768w/lastz_1.04.52-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.cUoq768w/b1/lastz_1.04.52-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.cUoq768w/b2/lastz_1.04.52-1_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 202ms CPU time consumed: 174ms Memory peak: 18.2M (swap: 0B) Mon Sep 22 14:40:45 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Mon Sep 22 14:40:45 UTC 2025 I: lastz from forky built successfully and reproducibly on arm64. Mon Sep 22 14:40:46 UTC 2025 I: Removing signed lastz_1.04.52-1_arm64.buildinfo.asc files: removed './b1/lastz_1.04.52-1_arm64.buildinfo.asc' removed './b2/lastz_1.04.52-1_arm64.buildinfo.asc'