Sat Oct 11 21:30:48 UTC 2025 I: starting to build ntcard/forky/arm64 on jenkins on '2025-10-11 21:30' Sat Oct 11 21:30:48 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_8/91925/console.log Sat Oct 11 21:30:48 UTC 2025 I: Downloading source for forky/ntcard=1.2.2+dfsg-10 --2025-10-11 21:30:48-- http://deb.debian.org/debian/pool/main/n/ntcard/ntcard_1.2.2%2bdfsg-10.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2162 (2.1K) [text/prs.lines.tag] Saving to: ‘ntcard_1.2.2+dfsg-10.dsc’ 0K .. 100% 239M=0s 2025-10-11 21:30:48 (239 MB/s) - ‘ntcard_1.2.2+dfsg-10.dsc’ saved [2162/2162] Sat Oct 11 21:30:48 UTC 2025 I: ntcard_1.2.2+dfsg-10.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: ntcard Binary: ntcard Architecture: any Version: 1.2.2+dfsg-10 Maintainer: Debian Med Packaging Team Uploaders: Nilesh Patra , Étienne Mollier Homepage: https://github.com/bcgsc/ntCard Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/ntcard Vcs-Git: https://salsa.debian.org/med-team/ntcard.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), architecture-is-64-bit Package-List: ntcard deb science optional arch=any Checksums-Sha1: 41dbffe6384de113dec420f1cb68f90969aa03db 62710 ntcard_1.2.2+dfsg.orig.tar.gz f01eb1b87e66e0bf1ef6d60ef817739633546314 772576 ntcard_1.2.2+dfsg-10.debian.tar.xz Checksums-Sha256: 74d063a840f04ede0442c7ca061b569ac5423b9632beb120d80e283728ac5345 62710 ntcard_1.2.2+dfsg.orig.tar.gz c13a363034af1c1cc754d0cd49e6d9a04fb423c4e30315c6036a4099101c9c46 772576 ntcard_1.2.2+dfsg-10.debian.tar.xz Files: 184d4ad9728fdc3c6a1f301e07d2fa20 62710 ntcard_1.2.2+dfsg.orig.tar.gz 1a544c354e842409518cd98883603673 772576 ntcard_1.2.2+dfsg-10.debian.tar.xz Dgit: 0b5ecc11abf65b13461a367a23798a272472b222 debian archive/debian/1.2.2+dfsg-10 https://git.dgit.debian.org/ntcard -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmjgNSwUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdr9zA//WX78fzVbR6sJCpq5l5Di0Va6dIAV 48RJJy8o+XE/ZcM2f9IkKOFH5fRJpuoWzda4uGO3Rcy8nneKvlzyni9KI8nJJKHK na4bHYSKRiHaHM03w0GSzTZP5Sk4VqKRA8UQOAGusKllCxyYUTy4Sa0ek4dEWuJm wQ4HoofglWWNVtuTznbOyL5SRJoOGi2oEcedeUt6M+xaE+QMCIOYKIhPoYCQbYMi 9EBEj7/j+vOPKL1/mmxkEo49+U6SWzztIcF7AHfIFA1ICJaLQ7VelI9QnRX31IVa BId/hi/iq4Fg/S0sUNdRpnZtUSAVLdC1LRo5cvKiYk2lfT3TDIJRzrAyknGNtF8W QrbfOw32aQmFzHrg7mRYrlp8DxtMHr51vdF+irzp6h6/oVG9vEj6ogsDEXZNFmBi CwSOlQIDKhf9tfwnDCJ0C7dhYzPtyKr7sZI4zszqqX5kmPhIzOhx0bKe3Ga2hZ8+ zby+5Tze0ErW5KCuT1WyIKVcckkow7H3mD5/6v+pqPKHkPErT+nhmtbkP6BXfigw uNVeQ6Qvq3jivkpjJrn2Gsrrp4WUskezj5EW6HCZJXh2IXvqKQIzSYM22p7WisaO VXYzGNgBvp4LyXAPvwCC2P8+UdEull5VfNmMKfp1x6N8YGOusTUvT7lNUf+QZrdT ShugLRDAVfu/rnE= =FtBA -----END PGP SIGNATURE----- Sat Oct 11 21:30:48 UTC 2025 I: Checking whether the package is not for us Sat Oct 11 21:30:48 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Sat Oct 11 21:30:48 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Sat Oct 11 21:31:45 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. W: cgroups are not available on the host, not using them. I: pbuilder: network access will be disabled during build I: Current time: Sat Oct 11 09:30:50 -12 2025 I: pbuilder-time-stamp: 1760218250 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [ntcard_1.2.2+dfsg-10.dsc] I: copying [./ntcard_1.2.2+dfsg.orig.tar.gz] I: copying [./ntcard_1.2.2+dfsg-10.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./ntcard_1.2.2+dfsg-10.dsc: no acceptable signature found dpkg-source: info: extracting ntcard in ntcard-1.2.2+dfsg dpkg-source: info: unpacking ntcard_1.2.2+dfsg.orig.tar.gz dpkg-source: info: unpacking ntcard_1.2.2+dfsg-10.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use-packaged-nthash.patch dpkg-source: info: applying fix-clean-target.patch dpkg-source: info: applying fixup-configure.ac.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/111483/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='111483' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CJ9DVx91/pbuilderrc_k8T3 --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CJ9DVx91/b1 --logfile b1/build.log ntcard_1.2.2+dfsg-10.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/sbin/chroot' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/111483/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), architecture-is-64-bit dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20000 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on architecture-is-64-bit; however: Package architecture-is-64-bit is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: architecture-properties{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 11.0 MB of archives. After unpacking 44.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.2-1 [94.3 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 architecture-properties arm64 0.2.6 [2336 B] Get: 12 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-2 [315 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 automake all 1:1.17-4 [862 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-5 [540 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 23 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.6+dfsg-0.1 [601 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 debhelper all 13.28 [941 kB] Fetched 11.0 MB in 0s (78.0 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20000 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2+b1_arm64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.8-2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41.2-1_arm64.deb ... Unpacking bsdextrautils (2.41.2-1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package architecture-properties:arm64. Preparing to unpack .../10-architecture-properties_0.2.6_arm64.deb ... Unpacking architecture-properties:arm64 (0.2.6) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.20-2_arm64.deb ... Unpacking m4 (1.4.20-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.28_all.deb ... Unpacking libdebhelper-perl (13.28) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.5.4-5_all.deb ... Unpacking libtool (2.5.4-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_21_all.deb ... Unpacking dh-autoreconf (21) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../22-libelf1t64_0.193-3_arm64.deb ... Unpacking libelf1t64:arm64 (0.193-3) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.16-2_arm64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../24-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2-16:arm64. Preparing to unpack .../25-libxml2-16_2.14.6+dfsg-0.1_arm64.deb ... Unpacking libxml2-16:arm64 (2.14.6+dfsg-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-2+b1_arm64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.28_all.deb ... Unpacking debhelper (13.28) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up bsdextrautils (2.41.2-1) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up architecture-properties:arm64 (0.2.6) ... Setting up libxml2-16:arm64 (2.14.6+dfsg-0.1) ... Setting up libdebhelper-perl (13.28) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-2) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.193-3) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:arm64 (0.0.8-2) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.28) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.2-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/ntcard-1.2.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ntcard_1.2.2+dfsg-10_source.changes dpkg-buildpackage: info: source package ntcard dpkg-buildpackage: info: source version 1.2.2+dfsg-10 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf configure.ac:7: warning: The macro 'AC_CONFIG_HEADER' is obsolete. configure.ac:7: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:7: the top level configure.ac:29: warning: The macro 'AC_HEADER_STDC' is obsolete. configure.ac:29: You should run autoupdate. ./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from... configure.ac:29: the top level configure.ac:38: warning: The macro 'AC_FUNC_SETVBUF_REVERSED' is obsolete. Remove it and all references to SETVBUF_REVERSED. ./lib/autoconf/functions.m4:1785: AC_FUNC_SETVBUF_REVERSED is expanded from... configure.ac:38: the top level configure.ac:19: installing './compile' configure.ac:35: installing './config.guess' configure.ac:35: installing './config.sub' configure.ac:5: installing './install-sh' configure.ac:5: installing './missing' Makefile.am: installing './depcomp' debian/rules execute_before_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg' cp -a debian/vendor/*.hpp /build/reproducible-path/ntcard-1.2.2+dfsg make[1]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg' dh_auto_configure ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for gawk... (cached) mawk checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking how to run the C preprocessor... gcc -E checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking for ranlib... ranlib checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for vfork.h... no checking for dlfcn.h... yes checking for fcntl.h... yes checking for float.h... yes checking for limits.h... yes checking for stddef.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for sys/param.h... yes checking for zlib.h... no checking for _Bool... yes checking for stdbool.h that conforms to C99 or later... yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for dup2... yes checking for gethostname... yes checking for getopt_long... yes checking for getpagesize... yes checking for memset... yes checking for strdup... yes checking for strerror... yes checking for strtoul... yes checking for pid_t... yes checking for fork... yes checking for vfork... yes checking for vprintf... yes checking for working fork... yes checking for working vfork... (cached) yes checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for GNU libc compatible realloc... yes checking whether byte ordering is bigendian... no checking for an ANSI C-conforming const... yes checking for inline... inline checking for ptrdiff_t... yes checking for mode_t... yes checking for pid_t... (cached) yes checking for size_t... yes checking for ssize_t... yes checking for int64_t... yes checking for uint8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for sqrt in -lm... yes checking for pow... yes checking for sqrt... yes checking for ceilf... yes checking for dlsym in -ldl... yes checking for gzwrite in -lz... no checking for g++ option to support OpenMP... -fopenmp checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating data/Makefile config.status: creating config.h config.status: executing depfiles commands dh_auto_build make -j12 make[1]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg' make all-recursive make[2]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg' Making all in data make[3]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg/data' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg/data' make[3]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg' g++ -DHAVE_CONFIG_H -I. -I./Common -I/usr/include -I/build/reproducible-path/ntcard-1.2.2+dfsg -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/ntcard-1.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o ntcard-ntcard.o `test -f 'ntcard.cpp' || echo './'`ntcard.cpp g++ -DHAVE_CONFIG_H -I. -I./Common -I/usr/include -I/build/reproducible-path/ntcard-1.2.2+dfsg -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/ntcard-1.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o nthll-nthll.o `test -f 'nthll.cpp' || echo './'`nthll.cpp g++ -DHAVE_CONFIG_H -I. -I./Common -I/usr/include -I/build/reproducible-path/ntcard-1.2.2+dfsg -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/ntcard-1.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o Common/ntcard-Uncompress.o `test -f 'Common/Uncompress.cpp' || echo './'`Common/Uncompress.cpp g++ -DHAVE_CONFIG_H -I. -I./Common -I/usr/include -I/build/reproducible-path/ntcard-1.2.2+dfsg -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/ntcard-1.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o Common/ntcard-SignalHandler.o `test -f 'Common/SignalHandler.cpp' || echo './'`Common/SignalHandler.cpp g++ -DHAVE_CONFIG_H -I. -I./Common -I/usr/include -I/build/reproducible-path/ntcard-1.2.2+dfsg -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/ntcard-1.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o Common/ntcard-Fcontrol.o `test -f 'Common/Fcontrol.cpp' || echo './'`Common/Fcontrol.cpp g++ -DHAVE_CONFIG_H -I. -I./Common -I/usr/include -I/build/reproducible-path/ntcard-1.2.2+dfsg -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/ntcard-1.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o Common/nthll-Uncompress.o `test -f 'Common/Uncompress.cpp' || echo './'`Common/Uncompress.cpp g++ -DHAVE_CONFIG_H -I. -I./Common -I/usr/include -I/build/reproducible-path/ntcard-1.2.2+dfsg -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/ntcard-1.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o Common/nthll-SignalHandler.o `test -f 'Common/SignalHandler.cpp' || echo './'`Common/SignalHandler.cpp g++ -DHAVE_CONFIG_H -I. -I./Common -I/usr/include -I/build/reproducible-path/ntcard-1.2.2+dfsg -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/ntcard-1.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o Common/nthll-Fcontrol.o `test -f 'Common/Fcontrol.cpp' || echo './'`Common/Fcontrol.cpp g++ -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/ntcard-1.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp -Wl,-z,relro -Wl,-z,now -o nthll Common/nthll-Uncompress.o Common/nthll-SignalHandler.o Common/nthll-Fcontrol.o nthll-nthll.o -ldl -lm g++ -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/build/reproducible-path/ntcard-1.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp -Wl,-z,relro -Wl,-z,now -o ntcard Common/ntcard-Uncompress.o Common/ntcard-SignalHandler.o Common/ntcard-Fcontrol.o ntcard-ntcard.o -ldl -lm make[3]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg' make[2]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg' make[1]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg' echo "I: Tests try to download external files, skip build time tests" I: Tests try to download external files, skip build time tests make[1]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/ntcard/ make -j12 install DESTDIR=/build/reproducible-path/ntcard-1.2.2\+dfsg/debian/ntcard AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg' Making install in data make[2]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg/data' make[3]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg/data' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg/data' make[2]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg/data' make[2]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg' make[3]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg' /usr/bin/mkdir -p '/build/reproducible-path/ntcard-1.2.2+dfsg/debian/ntcard/usr/bin' /usr/bin/mkdir -p '/build/reproducible-path/ntcard-1.2.2+dfsg/debian/ntcard/usr/share/doc/ntcard' /usr/bin/install -c ntcard nthll '/build/reproducible-path/ntcard-1.2.2+dfsg/debian/ntcard/usr/bin' /usr/bin/install -c -m 644 ChangeLog CITATION.bib LICENSE README.md '/build/reproducible-path/ntcard-1.2.2+dfsg/debian/ntcard/usr/share/doc/ntcard' make[3]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg' make[2]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg' make[1]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg' dh_installdocs debian/rules execute_after_dh_installdocs make[1]: Entering directory '/build/reproducible-path/ntcard-1.2.2+dfsg' find debian -name 'LICENSE' | xargs rm -rf make[1]: Leaving directory '/build/reproducible-path/ntcard-1.2.2+dfsg' dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'ntcard-dbgsym' in '../ntcard-dbgsym_1.2.2+dfsg-10_arm64.deb'. dpkg-deb: building package 'ntcard' in '../ntcard_1.2.2+dfsg-10_arm64.deb'. dpkg-genbuildinfo --build=binary -O../ntcard_1.2.2+dfsg-10_arm64.buildinfo dpkg-genchanges --build=binary -O../ntcard_1.2.2+dfsg-10_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/111483 and its subdirectories I: Current time: Sat Oct 11 09:31:44 -12 2025 I: pbuilder-time-stamp: 1760218304 Sat Oct 11 21:31:45 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Sat Oct 11 21:31:45 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Sat Oct 11 21:32:42 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Sat Oct 11 21:32:43 UTC 2025 I: ntcard_1.2.2+dfsg-10_arm64.changes: Format: 1.8 Date: Fri, 03 Oct 2025 22:00:22 +0200 Source: ntcard Binary: ntcard ntcard-dbgsym Architecture: arm64 Version: 1.2.2+dfsg-10 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: ntcard - Streaming algorithm to estimate cardinality in genomics datasets Changes: ntcard (1.2.2+dfsg-10) unstable; urgency=medium . * d/watch: convert to v5 watch file (and repair scanning). * d/control: declare compliance to standards version 4.7.2. * d/control: drop redundant Rules-Requires-Root: no. * fixup-configure.ac.patch: forwarded upstream. Checksums-Sha1: 2ff3d2eaa9277af3bdac581a8afe0620ed2f0fc0 302436 ntcard-dbgsym_1.2.2+dfsg-10_arm64.deb e1ee05caa97be0592d38f820446c87ff809f6716 4855 ntcard_1.2.2+dfsg-10_arm64.buildinfo 7a4529c5488ab0c91f66fc8475eccf53a4b0542f 38568 ntcard_1.2.2+dfsg-10_arm64.deb Checksums-Sha256: 606484a0f85f77f0395fa3e708ae8f6c949d4168de0ed5dd194a6c1e165de122 302436 ntcard-dbgsym_1.2.2+dfsg-10_arm64.deb 8e8740c72e05e04f527c4addd23fe9499e093902f6ced60627a078afac29211d 4855 ntcard_1.2.2+dfsg-10_arm64.buildinfo 74233269c2b13a2b61a449acb91c9c694e974045dd2510c2e9a0499a5fb6b3fb 38568 ntcard_1.2.2+dfsg-10_arm64.deb Files: d1353cf1c52bc8d15f4eeeca823ad28a 302436 debug optional ntcard-dbgsym_1.2.2+dfsg-10_arm64.deb 83e5d79571c794491c7ef214ecf180bd 4855 science optional ntcard_1.2.2+dfsg-10_arm64.buildinfo c42d529d39f54653bd64a0de679aa5c1 38568 science optional ntcard_1.2.2+dfsg-10_arm64.deb Sat Oct 11 21:32:43 UTC 2025 I: diffoscope 306 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_8-91925.service; invocation ID: 7572b0f0f4c94bf6a1a2d7b74eefcf14 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.CJ9DVx91/ntcard_1.2.2+dfsg-10.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.CJ9DVx91/ntcard_1.2.2+dfsg-10.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.CJ9DVx91/ntcard_1.2.2+dfsg-10.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.CJ9DVx91/b1/ntcard_1.2.2+dfsg-10_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.CJ9DVx91/b2/ntcard_1.2.2+dfsg-10_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 210ms CPU time consumed: 174ms Memory peak: 17.5M (swap: 0B) Sat Oct 11 21:32:44 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Sat Oct 11 21:32:44 UTC 2025 I: ntcard from forky built successfully and reproducibly on arm64. Sat Oct 11 21:32:45 UTC 2025 I: Removing signed ntcard_1.2.2+dfsg-10_arm64.buildinfo.asc files: removed './b1/ntcard_1.2.2+dfsg-10_arm64.buildinfo.asc' removed './b2/ntcard_1.2.2+dfsg-10_arm64.buildinfo.asc'