Thu Aug 21 04:17:36 UTC 2025 I: starting to build presto/forky/arm64 on jenkins on '2025-08-21 04:17' Thu Aug 21 04:17:36 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_1/93382/console.log Thu Aug 21 04:17:36 UTC 2025 I: Downloading source for forky/presto=0.7.5-1 --2025-08-21 04:17:36-- http://deb.debian.org/debian/pool/main/p/presto/presto_0.7.5-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2259 (2.2K) [text/prs.lines.tag] Saving to: ‘presto_0.7.5-1.dsc’ 0K .. 100% 222M=0s 2025-08-21 04:17:36 (222 MB/s) - ‘presto_0.7.5-1.dsc’ saved [2259/2259] Thu Aug 21 04:17:36 UTC 2025 I: presto_0.7.5-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: presto Binary: python3-presto, presto Architecture: any all Version: 0.7.5-1 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://presto.readthedocs.io Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/presto Vcs-Git: https://salsa.debian.org/med-team/presto.git Testsuite: autopkgtest-pkg-pybuild Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-biopython , python3-pandas , python3-scipy , python3-packaging , vsearch [amd64 arm64 kfreebsd-amd64 ppc64el] , cd-hit Package-List: presto deb python optional arch=all python3-presto deb python optional arch=any Checksums-Sha1: 32100655ce8a0d80faf00c772d953898dc1ec159 93236 presto_0.7.5.orig.tar.xz 8e655cfe86e5f160a4d92df3644275ad68344ec9 21924 presto_0.7.5-1.debian.tar.xz Checksums-Sha256: f64774354a7703e9bf9557f64793342ab3e354d0b4d99a5d8e6f668f6100a301 93236 presto_0.7.5.orig.tar.xz 2788fbcdd87da38814c38a242ab70f7077f02ddb3fe7fbb18ae7d7b13998e151 21924 presto_0.7.5-1.debian.tar.xz Files: fb09a44ddbcd1a99e78ef11f26868a40 93236 presto_0.7.5.orig.tar.xz e116a0994f44703bcd829bbc146a202a 21924 presto_0.7.5-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJHBAEBCgAxFiEE3z4uQkp+J5wuSwI6ucKa7rL0UKcFAmiiHIMTHG1vZWxsZXJA ZGViaWFuLm9yZwAKCRC5wprusvRQp1kMD/oCuiMn8fTR0DQ6s8ebKpRiSp1QSqQm Y7W6ge1diUAtPb+jqxNJ8nIyiVywWKj8fkBCLgg7W4tpHwqts7gb/++4OjaynvPf TvQRPrAQu3TpUC0EQoENX5JzAEAM7OkGf67xJ0JFrNPw4JKaXN6TTvzUvlqYbS+f L8oRWK1Jx02rYZ57DrQ26Jh+rFwc4stutrmFDvuayZ/vbW63uV01Fqw9oL0bpurW 11J+DP3yzXjkWQyLAQN7KeYqwwApVPPyniYFPLaAnkRIMupbFUA7S2bD+4Zxawie SFnUPJWLR+uxwxq0tDn7O/Pf89qGL934ssMjcvy7y1q1j+xk8ntxrmeJ+dJMmq50 I7smGaqa2X6d4wJw57M0brYpiyvyJM5cFAe3aQtwSYk/jg5bJ+E0DFsnyCkdZYad lfMNglA/JaQFeK5VOx4bY8U5VYPNi5UjiKX8+PC66pbFRoiHPN+7FjOJYrj3HgEZ Ksflp6itsjvlMMB7QBOM6VPZadUwFDgASuQKM62t6RWC8FWqQUE+B1WVbSYfp2X6 z5Gt6nsnVzKxTOGeIN29aUp0ZPSXHip/M9ghaX9a5zvgqBN1jObQdKr3csJdOHDx 31NGyLs4DDzxMko17xCASOGclv+VV6HbZZl7JO/l2bsaMUMVz08lUgffYjsP6m+3 8QH2wTOT6LsRkw== =9DVI -----END PGP SIGNATURE----- Thu Aug 21 04:17:37 UTC 2025 I: Checking whether the package is not for us Thu Aug 21 04:17:37 UTC 2025 I: Starting 1st build on remote node codethink03-arm64.debian.net. Thu Aug 21 04:17:37 UTC 2025 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Thu Aug 21 04:20:18 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Sep 22 22:40:38 -12 2026 I: pbuilder-time-stamp: 1790160038 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [presto_0.7.5-1.dsc] I: copying [./presto_0.7.5.orig.tar.xz] I: copying [./presto_0.7.5-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./presto_0.7.5-1.dsc: no acceptable signature found dpkg-source: info: extracting presto in presto-0.7.5 dpkg-source: info: unpacking presto_0.7.5.orig.tar.xz dpkg-source: info: unpacking presto_0.7.5-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying python3.12-syntax.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/395975/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='338eba5e1b104b1aaf7c007f77eb0403' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='395975' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Ni5dsmwp/pbuilderrc_KfLR --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Ni5dsmwp/b1 --logfile b1/build.log presto_0.7.5-1.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.12.41+deb13-cloud-arm64 #1 SMP Debian 6.12.41-1 (2025-08-12) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/395975/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-biopython, python3-pandas, python3-scipy, python3-packaging, vsearch, cd-hit dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20003 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-packaging; however: Package python3-packaging is not installed. pbuilder-satisfydepends-dummy depends on vsearch; however: Package vsearch is not installed. pbuilder-satisfydepends-dummy depends on cd-hit; however: Package cd-hit is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cd-hit{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libharfbuzz0b{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} liblapack3{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2-16{a} libxrender1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-biopython{a} python3-cairo{a} python3-charset-normalizer{a} python3-dateutil{a} python3-decorator{a} python3-freetype{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pkg-resources{a} python3-pytz{a} python3-reportlab{a} python3-rlpycairo{a} python3-scipy{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} vsearch{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl fonts-dejavu-extra libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ python-biopython-doc python3-bottleneck python3-bs4 python3-html5lib python3-jinja2 python3-lxml python3-matplotlib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-pooch python3-tables python3-tz python3-yaml shared-mime-info wget xdg-user-dirs 0 packages upgraded, 120 newly installed, 0 to remove and 0 not upgraded. Need to get 72.3 MB of archives. After unpacking 296 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libpython3.13-minimal arm64 3.13.6-1 [857 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 python3.13-minimal arm64 3.13.6-1 [2005 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 python3-minimal arm64 3.13.5-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.4.8-2 [21.3 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 libreadline8t64 arm64 8.2-6 [159 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 libpython3.13-stdlib arm64 3.13.6-1 [1897 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 python3.13 arm64 3.13.6-1 [761 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 libpython3-stdlib arm64 3.13.5-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 python3 arm64 3.13.5-1 [28.2 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 python3-numpy-dev arm64 1:2.2.4+ds-1 [136 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 libblas3 arm64 3.12.1-6 [104 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 libgfortran5 arm64 15.2.0-1 [370 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 liblapack3 arm64 3.12.1-6 [1820 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 python3-numpy arm64 1:2.2.4+ds-1 [3604 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.1-1 [93.8 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.19-8 [285 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 32 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 automake all 1:1.17-4 [862 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 cd-hit arm64 4.8.1-4+b1 [509 kB] Get: 36 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.25 [91.6 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-4 [539 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 42 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 43 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 45 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.5+dfsg-0.1 [583 kB] Get: 46 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 debhelper all 13.25 [937 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 dh-python all 6.20250414 [116 kB] Get: 51 http://deb.debian.org/debian forky/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 52 http://deb.debian.org/debian forky/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 53 http://deb.debian.org/debian forky/main arm64 libfontenc1 arm64 1:1.1.8-1+b2 [22.5 kB] Get: 54 http://deb.debian.org/debian forky/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 55 http://deb.debian.org/debian forky/main arm64 libpng16-16t64 arm64 1.6.50-1 [275 kB] Get: 56 http://deb.debian.org/debian forky/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB] Get: 57 http://deb.debian.org/debian forky/main arm64 x11-common all 1:7.7+24 [217 kB] Get: 58 http://deb.debian.org/debian forky/main arm64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 59 http://deb.debian.org/debian forky/main arm64 xfonts-utils arm64 1:7.7+7 [89.3 kB] Get: 60 http://deb.debian.org/debian forky/main arm64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 61 http://deb.debian.org/debian forky/main arm64 fontconfig-config arm64 2.15.0-2.3 [318 kB] Get: 62 http://deb.debian.org/debian forky/main arm64 libfontconfig1 arm64 2.15.0-2.3 [387 kB] Get: 63 http://deb.debian.org/debian forky/main arm64 libpixman-1-0 arm64 0.44.0-3 [168 kB] Get: 64 http://deb.debian.org/debian forky/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 65 http://deb.debian.org/debian forky/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Get: 66 http://deb.debian.org/debian forky/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 67 http://deb.debian.org/debian forky/main arm64 libx11-data all 2:1.8.12-1 [343 kB] Get: 68 http://deb.debian.org/debian forky/main arm64 libx11-6 arm64 2:1.8.12-1 [795 kB] Get: 69 http://deb.debian.org/debian forky/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB] Get: 70 http://deb.debian.org/debian forky/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB] Get: 71 http://deb.debian.org/debian forky/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB] Get: 72 http://deb.debian.org/debian forky/main arm64 libxrender1 arm64 1:0.9.12-1 [27.0 kB] Get: 73 http://deb.debian.org/debian forky/main arm64 libcairo2 arm64 1.18.4-1+b1 [483 kB] Get: 74 http://deb.debian.org/debian forky/main arm64 libdeflate0 arm64 1.23-2 [42.4 kB] Get: 75 http://deb.debian.org/debian forky/main arm64 libfribidi0 arm64 1.0.16-1 [26.5 kB] Get: 76 http://deb.debian.org/debian forky/main arm64 libglib2.0-0t64 arm64 2.84.4-3 [1428 kB] Get: 77 http://deb.debian.org/debian forky/main arm64 libgraphite2-3 arm64 1.3.14-3 [70.3 kB] Get: 78 http://deb.debian.org/debian forky/main arm64 libharfbuzz0b arm64 10.2.0-1+b1 [442 kB] Get: 79 http://deb.debian.org/debian forky/main arm64 libimagequant0 arm64 2.18.0-1+b2 [34.6 kB] Get: 80 http://deb.debian.org/debian forky/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB] Get: 81 http://deb.debian.org/debian forky/main arm64 libjpeg62-turbo arm64 1:2.1.5-4 [173 kB] Get: 82 http://deb.debian.org/debian forky/main arm64 liblcms2-2 arm64 2.16-2 [151 kB] Get: 83 http://deb.debian.org/debian forky/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB] Get: 84 http://deb.debian.org/debian forky/main arm64 libopenjp2-7 arm64 2.5.3-2.1 [189 kB] Get: 85 http://deb.debian.org/debian forky/main arm64 libraqm0 arm64 0.10.3-1 [13.6 kB] Get: 86 http://deb.debian.org/debian forky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [114 kB] Get: 87 http://deb.debian.org/debian forky/main arm64 libwebp7 arm64 1.5.0-0.1 [271 kB] Get: 88 http://deb.debian.org/debian forky/main arm64 libtiff6 arm64 4.7.0-3 [325 kB] Get: 89 http://deb.debian.org/debian forky/main arm64 libwebpdemux2 arm64 1.5.0-0.1 [113 kB] Get: 90 http://deb.debian.org/debian forky/main arm64 libwebpmux3 arm64 1.5.0-0.1 [125 kB] Get: 91 http://deb.debian.org/debian forky/main arm64 python3-all arm64 3.13.5-1 [1044 B] Get: 92 http://deb.debian.org/debian forky/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 93 http://deb.debian.org/debian forky/main arm64 python3-charset-normalizer arm64 3.4.2-1 [120 kB] Get: 94 http://deb.debian.org/debian forky/main arm64 python3-pil arm64 11.1.0-5+b1 [495 kB] Get: 95 http://deb.debian.org/debian forky/main arm64 python3-cairo arm64 1.27.0-2 [114 kB] Get: 96 http://deb.debian.org/debian forky/main arm64 python3-freetype all 2.5.1-2 [89.4 kB] Get: 97 http://deb.debian.org/debian forky/main arm64 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 98 http://deb.debian.org/debian forky/main arm64 python3-reportlab all 4.4.3-1 [1168 kB] Get: 99 http://deb.debian.org/debian forky/main arm64 sgml-base all 1.31+nmu1 [10.9 kB] Get: 100 http://deb.debian.org/debian forky/main arm64 xml-core all 0.19 [20.1 kB] Get: 101 http://deb.debian.org/debian forky/main arm64 w3c-sgml-lib all 1.3-3 [273 kB] Get: 102 http://deb.debian.org/debian forky/main arm64 python3-biopython arm64 1.85+dfsg-4 [1657 kB] Get: 103 http://deb.debian.org/debian forky/main arm64 python3-dateutil all 2.9.0-4 [79.4 kB] Get: 104 http://deb.debian.org/debian forky/main arm64 python3-decorator all 5.2.1-2 [33.0 kB] Get: 105 http://deb.debian.org/debian forky/main arm64 python3-more-itertools all 10.7.0-1 [67.4 kB] Get: 106 http://deb.debian.org/debian forky/main arm64 python3-typing-extensions all 4.14.1-1 [91.3 kB] Get: 107 http://deb.debian.org/debian forky/main arm64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 108 http://deb.debian.org/debian forky/main arm64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 109 http://deb.debian.org/debian forky/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 110 http://deb.debian.org/debian forky/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 111 http://deb.debian.org/debian forky/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 112 http://deb.debian.org/debian forky/main arm64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 113 http://deb.debian.org/debian forky/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 114 http://deb.debian.org/debian forky/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 115 http://deb.debian.org/debian forky/main arm64 python3-packaging all 25.0-1 [56.6 kB] Get: 116 http://deb.debian.org/debian forky/main arm64 python3-pytz all 2025.2-3 [152 kB] Get: 117 http://deb.debian.org/debian forky/main arm64 python3-pandas-lib arm64 2.2.3+dfsg-9 [3877 kB] Get: 118 http://deb.debian.org/debian forky/main arm64 python3-pandas all 2.2.3+dfsg-9 [3097 kB] Get: 119 http://deb.debian.org/debian forky/main arm64 python3-scipy arm64 1.15.3-1 [14.9 MB] Get: 120 http://deb.debian.org/debian forky/main arm64 vsearch arm64 2.30.0-1 [413 kB] Fetched 72.3 MB in 1s (97.5 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20003 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_arm64.deb ... Unpacking libexpat1:arm64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.6-1_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.6-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.6-1_arm64.deb ... Unpacking python3.13-minimal (3.13.6-1) ... Setting up libpython3.13-minimal:arm64 (3.13.6-1) ... Setting up libexpat1:arm64 (2.7.1-2) ... Setting up python3.13-minimal (3.13.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20337 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.5-1_arm64.deb ... Unpacking python3-minimal (3.13.5-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-5_all.deb ... Unpacking tzdata (2025b-5) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../4-libffi8_3.4.8-2_arm64.deb ... Unpacking libffi8:arm64 (3.4.8-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../6-libreadline8t64_8.2-6_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.6-1_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.6-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.6-1_arm64.deb ... Unpacking python3.13 (3.13.6-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../9-libpython3-stdlib_3.13.5-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.13.5-1) ... Setting up python3-minimal (3.13.5-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21352 files and directories currently installed.) Preparing to unpack .../000-python3_3.13.5-1_arm64.deb ... Unpacking python3 (3.13.5-1) ... Selecting previously unselected package python3-numpy-dev:arm64. Preparing to unpack .../001-python3-numpy-dev_1%3a2.2.4+ds-1_arm64.deb ... Unpacking python3-numpy-dev:arm64 (1:2.2.4+ds-1) ... Selecting previously unselected package libblas3:arm64. Preparing to unpack .../002-libblas3_3.12.1-6_arm64.deb ... Unpacking libblas3:arm64 (3.12.1-6) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../003-libgfortran5_15.2.0-1_arm64.deb ... Unpacking libgfortran5:arm64 (15.2.0-1) ... Selecting previously unselected package liblapack3:arm64. Preparing to unpack .../004-liblapack3_3.12.1-6_arm64.deb ... Unpacking liblapack3:arm64 (3.12.1-6) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../005-python3-numpy_1%3a2.2.4+ds-1_arm64.deb ... Unpacking python3-numpy (1:2.2.4+ds-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../006-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../008-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../009-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../010-gettext-base_0.23.1-2+b1_arm64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../011-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../012-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../013-bsdextrautils_2.41.1-1_arm64.deb ... Unpacking bsdextrautils (2.41.1-1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../014-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../015-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../016-m4_1.4.19-8_arm64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../017-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../018-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../019-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../020-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package cd-hit. Preparing to unpack .../021-cd-hit_4.8.1-4+b1_arm64.deb ... Unpacking cd-hit (4.8.1-4+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../022-libdebhelper-perl_13.25_all.deb ... Unpacking libdebhelper-perl (13.25) ... Selecting previously unselected package libtool. Preparing to unpack .../023-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../024-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../025-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../026-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../027-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../028-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../029-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../030-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2-16:arm64. Preparing to unpack .../031-libxml2-16_2.14.5+dfsg-0.1_arm64.deb ... Unpacking libxml2-16:arm64 (2.14.5+dfsg-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../032-gettext_0.23.1-2+b1_arm64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../033-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../034-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../035-debhelper_13.25_all.deb ... Unpacking debhelper (13.25) ... Selecting previously unselected package dh-python. Preparing to unpack .../036-dh-python_6.20250414_all.deb ... Unpacking dh-python (6.20250414) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../037-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../038-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package libfontenc1:arm64. Preparing to unpack .../039-libfontenc1_1%3a1.1.8-1+b2_arm64.deb ... Unpacking libfontenc1:arm64 (1:1.1.8-1+b2) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../040-libbrotli1_1.1.0-2+b7_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b7) ... Selecting previously unselected package libpng16-16t64:arm64. Preparing to unpack .../041-libpng16-16t64_1.6.50-1_arm64.deb ... Unpacking libpng16-16t64:arm64 (1.6.50-1) ... Selecting previously unselected package libfreetype6:arm64. Preparing to unpack .../042-libfreetype6_2.13.3+dfsg-1_arm64.deb ... Unpacking libfreetype6:arm64 (2.13.3+dfsg-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../043-x11-common_1%3a7.7+24_all.deb ... Unpacking x11-common (1:7.7+24) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../044-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../045-xfonts-utils_1%3a7.7+7_arm64.deb ... Unpacking xfonts-utils (1:7.7+7) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../046-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../047-fontconfig-config_2.15.0-2.3_arm64.deb ... Unpacking fontconfig-config (2.15.0-2.3) ... Selecting previously unselected package libfontconfig1:arm64. Preparing to unpack .../048-libfontconfig1_2.15.0-2.3_arm64.deb ... Unpacking libfontconfig1:arm64 (2.15.0-2.3) ... Selecting previously unselected package libpixman-1-0:arm64. Preparing to unpack .../049-libpixman-1-0_0.44.0-3_arm64.deb ... Unpacking libpixman-1-0:arm64 (0.44.0-3) ... Selecting previously unselected package libxau6:arm64. Preparing to unpack .../050-libxau6_1%3a1.0.11-1_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:arm64. Preparing to unpack .../051-libxdmcp6_1%3a1.1.5-1_arm64.deb ... Unpacking libxdmcp6:arm64 (1:1.1.5-1) ... Selecting previously unselected package libxcb1:arm64. Preparing to unpack .../052-libxcb1_1.17.0-2+b1_arm64.deb ... Unpacking libxcb1:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../053-libx11-data_2%3a1.8.12-1_all.deb ... Unpacking libx11-data (2:1.8.12-1) ... Selecting previously unselected package libx11-6:arm64. Preparing to unpack .../054-libx11-6_2%3a1.8.12-1_arm64.deb ... Unpacking libx11-6:arm64 (2:1.8.12-1) ... Selecting previously unselected package libxcb-render0:arm64. Preparing to unpack .../055-libxcb-render0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-render0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-shm0:arm64. Preparing to unpack .../056-libxcb-shm0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-shm0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxext6:arm64. Preparing to unpack .../057-libxext6_2%3a1.3.4-1+b3_arm64.deb ... Unpacking libxext6:arm64 (2:1.3.4-1+b3) ... Selecting previously unselected package libxrender1:arm64. Preparing to unpack .../058-libxrender1_1%3a0.9.12-1_arm64.deb ... Unpacking libxrender1:arm64 (1:0.9.12-1) ... Selecting previously unselected package libcairo2:arm64. Preparing to unpack .../059-libcairo2_1.18.4-1+b1_arm64.deb ... Unpacking libcairo2:arm64 (1.18.4-1+b1) ... Selecting previously unselected package libdeflate0:arm64. Preparing to unpack .../060-libdeflate0_1.23-2_arm64.deb ... Unpacking libdeflate0:arm64 (1.23-2) ... Selecting previously unselected package libfribidi0:arm64. Preparing to unpack .../061-libfribidi0_1.0.16-1_arm64.deb ... Unpacking libfribidi0:arm64 (1.0.16-1) ... Selecting previously unselected package libglib2.0-0t64:arm64. Preparing to unpack .../062-libglib2.0-0t64_2.84.4-3_arm64.deb ... Unpacking libglib2.0-0t64:arm64 (2.84.4-3) ... Selecting previously unselected package libgraphite2-3:arm64. Preparing to unpack .../063-libgraphite2-3_1.3.14-3_arm64.deb ... Unpacking libgraphite2-3:arm64 (1.3.14-3) ... Selecting previously unselected package libharfbuzz0b:arm64. Preparing to unpack .../064-libharfbuzz0b_10.2.0-1+b1_arm64.deb ... Unpacking libharfbuzz0b:arm64 (10.2.0-1+b1) ... Selecting previously unselected package libimagequant0:arm64. Preparing to unpack .../065-libimagequant0_2.18.0-1+b2_arm64.deb ... Unpacking libimagequant0:arm64 (2.18.0-1+b2) ... Selecting previously unselected package libjbig0:arm64. Preparing to unpack .../066-libjbig0_2.1-6.1+b2_arm64.deb ... Unpacking libjbig0:arm64 (2.1-6.1+b2) ... Selecting previously unselected package libjpeg62-turbo:arm64. Preparing to unpack .../067-libjpeg62-turbo_1%3a2.1.5-4_arm64.deb ... Unpacking libjpeg62-turbo:arm64 (1:2.1.5-4) ... Selecting previously unselected package liblcms2-2:arm64. Preparing to unpack .../068-liblcms2-2_2.16-2_arm64.deb ... Unpacking liblcms2-2:arm64 (2.16-2) ... Selecting previously unselected package liblerc4:arm64. Preparing to unpack .../069-liblerc4_4.0.0+ds-5_arm64.deb ... Unpacking liblerc4:arm64 (4.0.0+ds-5) ... Selecting previously unselected package libopenjp2-7:arm64. Preparing to unpack .../070-libopenjp2-7_2.5.3-2.1_arm64.deb ... Unpacking libopenjp2-7:arm64 (2.5.3-2.1) ... Selecting previously unselected package libraqm0:arm64. Preparing to unpack .../071-libraqm0_0.10.3-1_arm64.deb ... Unpacking libraqm0:arm64 (0.10.3-1) ... Selecting previously unselected package libsharpyuv0:arm64. Preparing to unpack .../072-libsharpyuv0_1.5.0-0.1_arm64.deb ... Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... Selecting previously unselected package libwebp7:arm64. Preparing to unpack .../073-libwebp7_1.5.0-0.1_arm64.deb ... Unpacking libwebp7:arm64 (1.5.0-0.1) ... Selecting previously unselected package libtiff6:arm64. Preparing to unpack .../074-libtiff6_4.7.0-3_arm64.deb ... Unpacking libtiff6:arm64 (4.7.0-3) ... Selecting previously unselected package libwebpdemux2:arm64. Preparing to unpack .../075-libwebpdemux2_1.5.0-0.1_arm64.deb ... Unpacking libwebpdemux2:arm64 (1.5.0-0.1) ... Selecting previously unselected package libwebpmux3:arm64. Preparing to unpack .../076-libwebpmux3_1.5.0-0.1_arm64.deb ... Unpacking libwebpmux3:arm64 (1.5.0-0.1) ... Selecting previously unselected package python3-all. Preparing to unpack .../077-python3-all_3.13.5-1_arm64.deb ... Unpacking python3-all (3.13.5-1) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../078-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-charset-normalizer. Preparing to unpack .../079-python3-charset-normalizer_3.4.2-1_arm64.deb ... Unpacking python3-charset-normalizer (3.4.2-1) ... Selecting previously unselected package python3-pil:arm64. Preparing to unpack .../080-python3-pil_11.1.0-5+b1_arm64.deb ... Unpacking python3-pil:arm64 (11.1.0-5+b1) ... Selecting previously unselected package python3-cairo. Preparing to unpack .../081-python3-cairo_1.27.0-2_arm64.deb ... Unpacking python3-cairo (1.27.0-2) ... Selecting previously unselected package python3-freetype. Preparing to unpack .../082-python3-freetype_2.5.1-2_all.deb ... Unpacking python3-freetype (2.5.1-2) ... Selecting previously unselected package python3-rlpycairo. Preparing to unpack .../083-python3-rlpycairo_0.3.0-3_all.deb ... Unpacking python3-rlpycairo (0.3.0-3) ... Selecting previously unselected package python3-reportlab. Preparing to unpack .../084-python3-reportlab_4.4.3-1_all.deb ... Unpacking python3-reportlab (4.4.3-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../085-sgml-base_1.31+nmu1_all.deb ... Unpacking sgml-base (1.31+nmu1) ... Selecting previously unselected package xml-core. Preparing to unpack .../086-xml-core_0.19_all.deb ... Unpacking xml-core (0.19) ... Selecting previously unselected package w3c-sgml-lib. Preparing to unpack .../087-w3c-sgml-lib_1.3-3_all.deb ... Unpacking w3c-sgml-lib (1.3-3) ... Selecting previously unselected package python3-biopython. Preparing to unpack .../088-python3-biopython_1.85+dfsg-4_arm64.deb ... Unpacking python3-biopython (1.85+dfsg-4) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../089-python3-dateutil_2.9.0-4_all.deb ... Unpacking python3-dateutil (2.9.0-4) ... Selecting previously unselected package python3-decorator. Preparing to unpack .../090-python3-decorator_5.2.1-2_all.deb ... Unpacking python3-decorator (5.2.1-2) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../091-python3-more-itertools_10.7.0-1_all.deb ... Unpacking python3-more-itertools (10.7.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../092-python3-typing-extensions_4.14.1-1_all.deb ... Unpacking python3-typing-extensions (4.14.1-1) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../093-python3-typeguard_4.4.4-1_all.deb ... Unpacking python3-typeguard (4.4.4-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../094-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../095-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../096-python3-pkg-resources_78.1.1-0.1_all.deb ... Unpacking python3-pkg-resources (78.1.1-0.1) ... Selecting previously unselected package python3-jaraco.text. Preparing to unpack .../097-python3-jaraco.text_4.0.0-1_all.deb ... Unpacking python3-jaraco.text (4.0.0-1) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../098-python3-zipp_3.21.0-1_all.deb ... Unpacking python3-zipp (3.21.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../099-python3-setuptools_78.1.1-0.1_all.deb ... Unpacking python3-setuptools (78.1.1-0.1) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../100-python3-jaraco.context_6.0.1-1_all.deb ... Unpacking python3-jaraco.context (6.0.1-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../101-python3-packaging_25.0-1_all.deb ... Unpacking python3-packaging (25.0-1) ... Selecting previously unselected package python3-pytz. Preparing to unpack .../102-python3-pytz_2025.2-3_all.deb ... Unpacking python3-pytz (2025.2-3) ... Selecting previously unselected package python3-pandas-lib:arm64. Preparing to unpack .../103-python3-pandas-lib_2.2.3+dfsg-9_arm64.deb ... Unpacking python3-pandas-lib:arm64 (2.2.3+dfsg-9) ... Selecting previously unselected package python3-pandas. Preparing to unpack .../104-python3-pandas_2.2.3+dfsg-9_all.deb ... Unpacking python3-pandas (2.2.3+dfsg-9) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../105-python3-scipy_1.15.3-1_arm64.deb ... Unpacking python3-scipy (1.15.3-1) ... Selecting previously unselected package vsearch. Preparing to unpack .../106-vsearch_2.30.0-1_arm64.deb ... Unpacking vsearch (2.30.0-1) ... Setting up cd-hit (4.8.1-4+b1) ... Setting up media-types (13.0.0) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libgraphite2-3:arm64 (1.3.14-3) ... Setting up liblcms2-2:arm64 (2.16-2) ... Setting up libpixman-1-0:arm64 (0.44.0-3) ... Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... Setting up libxau6:arm64 (1:1.0.11-1) ... Setting up libxdmcp6:arm64 (1:1.1.5-1) ... Setting up libxcb1:arm64 (1.17.0-2+b1) ... Setting up liblerc4:arm64 (4.0.0+ds-5) ... Setting up bsdextrautils (2.41.1-1) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libxcb-render0:arm64 (1.17.0-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up vsearch (2.30.0-1) ... Setting up libxml2-16:arm64 (2.14.5+dfsg-0.1) ... Setting up libdebhelper-perl (13.25) ... Setting up libbrotli1:arm64 (1.1.0-2+b7) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up x11-common (1:7.7+24) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:arm64 (1.23-2) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.19-8) ... Setting up libxcb-shm0:arm64 (1.17.0-2+b1) ... Setting up file (1:5.46-5) ... Setting up libjbig0:arm64 (2.1-6.1+b2) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Sep 23 10:41:29 UTC 2026. Universal Time is now: Wed Sep 23 10:41:29 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:arm64 (1:1.1.8-1+b2) ... Setting up autotools-dev (20240727.1) ... Setting up libblas3:arm64 (3.12.1-6) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libjpeg62-turbo:arm64 (1:2.1.5-4) ... Setting up libx11-data (2:1.8.12-1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:arm64 (1.0.16-1) ... Setting up libimagequant0:arm64 (2.18.0-1+b2) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:arm64 (1.6.50-1) ... Setting up python3-numpy-dev:arm64 (1:2.2.4+ds-1) ... Setting up autopoint (0.23.1-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libgfortran5:arm64 (15.2.0-1) ... Setting up autoconf (2.72-3.1) ... Setting up libwebp7:arm64 (1.5.0-0.1) ... Setting up libffi8:arm64 (3.4.8-2) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libtiff6:arm64 (4.7.0-3) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libopenjp2-7:arm64 (2.5.3-2.1) ... Setting up libx11-6:arm64 (2:1.8.12-1) ... Setting up netbase (6.5) ... Setting up sgml-base (1.31+nmu1) ... Setting up libwebpmux3:arm64 (1.5.0-0.1) ... Setting up readline-common (8.2-6) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up liblapack3:arm64 (3.12.1-6) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.23.1-2+b1) ... Setting up libxrender1:arm64 (1:0.9.12-1) ... Setting up libtool (2.5.4-4) ... Setting up fontconfig-config (2.15.0-2.3) ... Setting up libwebpdemux2:arm64 (1.5.0-0.1) ... Setting up libxext6:arm64 (2:1.3.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libglib2.0-0t64:arm64 (2.84.4-3) ... No schema files found: doing nothing. Setting up libfreetype6:arm64 (2.13.3+dfsg-1) ... Setting up libreadline8t64:arm64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up xml-core (0.19) ... Setting up libharfbuzz0b:arm64 (10.2.0-1+b1) ... Setting up libfontconfig1:arm64 (2.15.0-2.3) ... Setting up libpython3.13-stdlib:arm64 (3.13.6-1) ... Setting up libpython3-stdlib:arm64 (3.13.5-1) ... Setting up python3.13 (3.13.6-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.5-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-freetype (2.5.1-2) ... Setting up xfonts-utils (1:7.7+7) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:arm64 (1.18.4-1+b1) ... Setting up python3-decorator (5.2.1-2) ... Setting up python3-packaging (25.0-1) ... Setting up libraqm0:arm64 (0.10.3-1) ... Setting up python3-typing-extensions (4.14.1-1) ... Setting up python3-numpy (1:2.2.4+ds-1) ... Setting up python3-dateutil (2.9.0-4) ... Setting up dh-python (6.20250414) ... Setting up python3-more-itertools (10.7.0-1) ... Setting up python3-scipy (1.15.3-1) ... Setting up python3-cairo (1.27.0-2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up python3-charset-normalizer (3.4.2-1) ... Setting up python3-pandas-lib:arm64 (2.2.3+dfsg-9) ... Setting up python3-typeguard (4.4.4-1) ... Setting up python3-all (3.13.5-1) ... Setting up debhelper (13.25) ... Setting up python3-pytz (2025.2-3) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up python3-pil:arm64 (11.1.0-5+b1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pandas (2.2.3+dfsg-9) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-reportlab (4.4.3-1) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up python3-setuptools (78.1.1-0.1) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.85+dfsg-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/presto-0.7.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../presto_0.7.5-1_source.changes dpkg-buildpackage: info: source package presto dpkg-buildpackage: info: source version 0.7.5-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steffen Moeller dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 dpkg-source: info: using options from presto-0.7.5/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py clean running clean removing '/build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto copying presto/IO.py -> /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto copying presto/Applications.py -> /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto copying presto/Annotation.py -> /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto copying presto/__init__.py -> /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto copying presto/Version.py -> /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto copying presto/Sequence.py -> /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto copying presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto copying presto/Defaults.py -> /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto copying presto/Commandline.py -> /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto running build_scripts creating build/scripts-3.13 copying and adjusting bin/AlignSets.py -> build/scripts-3.13 copying and adjusting bin/AssemblePairs.py -> build/scripts-3.13 copying and adjusting bin/BuildConsensus.py -> build/scripts-3.13 copying and adjusting bin/ClusterSets.py -> build/scripts-3.13 copying and adjusting bin/CollapseSeq.py -> build/scripts-3.13 copying and adjusting bin/ConvertHeaders.py -> build/scripts-3.13 copying and adjusting bin/EstimateError.py -> build/scripts-3.13 copying and adjusting bin/FilterSeq.py -> build/scripts-3.13 copying and adjusting bin/MaskPrimers.py -> build/scripts-3.13 copying and adjusting bin/PairSeq.py -> build/scripts-3.13 copying and adjusting bin/ParseHeaders.py -> build/scripts-3.13 copying and adjusting bin/ParseLog.py -> build/scripts-3.13 copying and adjusting bin/SplitSeq.py -> build/scripts-3.13 copying and adjusting bin/UnifyHeaders.py -> build/scripts-3.13 changing mode of build/scripts-3.13/AlignSets.py from 644 to 755 changing mode of build/scripts-3.13/AssemblePairs.py from 644 to 755 changing mode of build/scripts-3.13/BuildConsensus.py from 644 to 755 changing mode of build/scripts-3.13/ClusterSets.py from 644 to 755 changing mode of build/scripts-3.13/CollapseSeq.py from 644 to 755 changing mode of build/scripts-3.13/ConvertHeaders.py from 644 to 755 changing mode of build/scripts-3.13/EstimateError.py from 644 to 755 changing mode of build/scripts-3.13/FilterSeq.py from 644 to 755 changing mode of build/scripts-3.13/MaskPrimers.py from 644 to 755 changing mode of build/scripts-3.13/PairSeq.py from 644 to 755 changing mode of build/scripts-3.13/ParseHeaders.py from 644 to 755 changing mode of build/scripts-3.13/ParseLog.py from 644 to 755 changing mode of build/scripts-3.13/SplitSeq.py from 644 to 755 changing mode of build/scripts-3.13/UnifyHeaders.py from 644 to 755 dh_auto_test -O--buildsystem=pybuild I: pybuild pybuild:308: cp -r /build/reproducible-path/presto-0.7.5/bin /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build; I: pybuild base:311: cd /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build; python3.13 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/presto-0.7.5/debian/python3-presto running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running build_scripts running install_lib creating /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages creating /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/SplitSeq.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/ParseLog.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/ParseHeaders.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/PairSeq.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/MaskPrimers.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/FilterSeq.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/EstimateError.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/CollapseSeq.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/ClusterSets.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/BuildConsensus.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/AssemblePairs.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/bin/AlignSets.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin creating /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto creating /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/__pycache__ copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/__pycache__/Defaults.cpython-313.pyc -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/__pycache__ copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/__pycache__/Version.cpython-313.pyc -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/__pycache__ copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/__pycache__ copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/Commandline.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/Defaults.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/Multiprocessing.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/Sequence.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/Version.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/__init__.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/Annotation.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/Applications.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto copying /build/reproducible-path/presto-0.7.5/.pybuild/cpython3_3.13_presto/build/presto/IO.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/UnifyHeaders.py to UnifyHeaders.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/SplitSeq.py to SplitSeq.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/ParseLog.py to ParseLog.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/ParseHeaders.py to ParseHeaders.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/PairSeq.py to PairSeq.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/MaskPrimers.py to MaskPrimers.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/FilterSeq.py to FilterSeq.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/EstimateError.py to EstimateError.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/ConvertHeaders.py to ConvertHeaders.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/CollapseSeq.py to CollapseSeq.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/ClusterSets.py to ClusterSets.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/BuildConsensus.py to BuildConsensus.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/AssemblePairs.py to AssemblePairs.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/bin/AlignSets.py to AlignSets.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/Commandline.py to Commandline.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/Defaults.py to Defaults.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/Multiprocessing.py to Multiprocessing.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/Sequence.py to Sequence.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/Version.py to Version.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/Annotation.py to Annotation.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/Applications.py to Applications.cpython-313.pyc byte-compiling /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto/IO.py to IO.cpython-313.pyc running install_egg_info running egg_info creating presto.egg-info writing presto.egg-info/PKG-INFO writing dependency_links to presto.egg-info/dependency_links.txt writing requirements to presto.egg-info/requires.txt writing top-level names to presto.egg-info/top_level.txt writing manifest file 'presto.egg-info/SOURCES.txt' reading manifest file 'presto.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'announcements.html' adding license file 'LICENSE' writing manifest file 'presto.egg-info/SOURCES.txt' Copying presto.egg-info to /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/lib/python3.13/dist-packages/presto-0.7.5.egg-info Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/UnifyHeaders.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/SplitSeq.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/ParseLog.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/ParseHeaders.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/PairSeq.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/MaskPrimers.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/FilterSeq.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/EstimateError.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/ConvertHeaders.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/CollapseSeq.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/ClusterSets.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/BuildConsensus.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/AssemblePairs.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin copying build/scripts-3.13/AlignSets.py -> /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/UnifyHeaders.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/SplitSeq.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/ParseLog.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/ParseHeaders.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/PairSeq.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/MaskPrimers.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/FilterSeq.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/EstimateError.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/ConvertHeaders.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/CollapseSeq.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/ClusterSets.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/BuildConsensus.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/AssemblePairs.py to 755 changing mode of /build/reproducible-path/presto-0.7.5/debian/python3-presto/usr/bin/AlignSets.py to 755 debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/presto-0.7.5' dh_install mkdir -p debian/presto/usr mv debian/python3-presto/usr/bin debian/presto/usr make[1]: Leaving directory '/build/reproducible-path/presto-0.7.5' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/presto-0.7.5' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/presto-0.7.5' dh_python3 -O--buildsystem=pybuild I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/AlignSets.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/AssemblePairs.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/BuildConsensus.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/ClusterSets.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/CollapseSeq.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/ConvertHeaders.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/EstimateError.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/FilterSeq.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/MaskPrimers.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/PairSeq.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/ParseHeaders.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/ParseLog.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/SplitSeq.py I: dh_python3 tools:114: replacing shebang in debian/presto/usr/bin/UnifyHeaders.py dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-presto' in '../python3-presto_0.7.5-1_arm64.deb'. dpkg-deb: building package 'presto' in '../presto_0.7.5-1_all.deb'. dpkg-genbuildinfo --build=binary -O../presto_0.7.5-1_arm64.buildinfo dpkg-genchanges --build=binary -O../presto_0.7.5-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from presto-0.7.5/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/395975 and its subdirectories I: Current time: Tue Sep 22 22:43:17 -12 2026 I: pbuilder-time-stamp: 1790160197 Thu Aug 21 04:20:19 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net. Thu Aug 21 04:20:19 UTC 2025 I: Preparing to do remote build '2' on codethink04-arm64.debian.net. Thu Aug 21 04:23:32 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. Thu Aug 21 04:23:32 UTC 2025 I: presto_0.7.5-1_arm64.changes: Format: 1.8 Date: Sun, 17 Aug 2025 20:02:34 +0200 Source: presto Binary: presto python3-presto Architecture: all arm64 Version: 0.7.5-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Steffen Moeller Description: presto - toolkit for processing B and T cell sequences python3-presto - toolkit for processing B and T cell sequences (Python3 module) Changes: presto (0.7.5-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.7.2 (routine-update) * Folder with examples is gone. * d/u/metadata: Update of URLs Checksums-Sha1: b98ce3f3a5dc09de6347fc76ecf5a97762976d00 67024 presto_0.7.5-1_all.deb a2831df918ba8bc32b7786da21d7afbbaff55dde 7657 presto_0.7.5-1_arm64.buildinfo 41a766693bbf75403f690b82c9e5ded3f63634a6 80208 python3-presto_0.7.5-1_arm64.deb Checksums-Sha256: 7e80890cf51bd585082f95591824681a68082a8dafcac35580716818bf005924 67024 presto_0.7.5-1_all.deb d375abc72a8b10e75323ec8bafe8df2662ccafe3348ec36ea7993bb80bbd8c5d 7657 presto_0.7.5-1_arm64.buildinfo fdc97c24d0a73406bbad7730808f8ea32fbf58acbf147741132b1ff1ce178436 80208 python3-presto_0.7.5-1_arm64.deb Files: 5488860fd0a0f920176f5f5e44945bd6 67024 python optional presto_0.7.5-1_all.deb 661a8234e74b903ee98beacf017051ae 7657 python optional presto_0.7.5-1_arm64.buildinfo 1184b3341c3ea02e6b4504140c9e044e 80208 python optional python3-presto_0.7.5-1_arm64.deb Thu Aug 21 04:23:33 UTC 2025 I: diffoscope 303 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_1-93382.service; invocation ID: d96f5d9e4a624bdba2ed3226646f8911 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.Ni5dsmwp/presto_0.7.5-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.Ni5dsmwp/presto_0.7.5-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.Ni5dsmwp/presto_0.7.5-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.Ni5dsmwp/b1/presto_0.7.5-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.Ni5dsmwp/b2/presto_0.7.5-1_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 220ms CPU time consumed: 189ms Memory peak: 18.4M (swap: 0B) Thu Aug 21 04:32:40 UTC 2025 I: diffoscope 303 found no differences in the changes files, and a .buildinfo file also exists. Thu Aug 21 04:32:40 UTC 2025 I: presto from forky built successfully and reproducibly on arm64. Thu Aug 21 04:32:41 UTC 2025 I: Removing signed presto_0.7.5-1_arm64.buildinfo.asc files: removed './b1/presto_0.7.5-1_arm64.buildinfo.asc' removed './b2/presto_0.7.5-1_arm64.buildinfo.asc'