Thu Sep 11 13:53:47 UTC 2025 I: starting to build pyusid/forky/arm64 on jenkins on '2025-09-11 13:53' Thu Sep 11 13:53:47 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_7/96156/console.log Thu Sep 11 13:53:47 UTC 2025 I: Downloading source for forky/pyusid=0.0.12-3 --2025-09-11 13:53:47-- http://deb.debian.org/debian/pool/main/p/pyusid/pyusid_0.0.12-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2169 (2.1K) [text/prs.lines.tag] Saving to: ‘pyusid_0.0.12-3.dsc’ 0K .. 100% 242M=0s 2025-09-11 13:53:47 (242 MB/s) - ‘pyusid_0.0.12-3.dsc’ saved [2169/2169] Thu Sep 11 13:53:47 UTC 2025 I: pyusid_0.0.12-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: pyusid Binary: python3-pyusid Architecture: all Version: 0.0.12-3 Maintainer: Debian PaN Maintainers Uploaders: Debian Python Team , Roland Mas Homepage: https://pycroscopy.github.io/pyUSID/about.html Standards-Version: 4.6.2.0 Vcs-Browser: https://salsa.debian.org/python-team/packages/pyusid Vcs-Git: https://salsa.debian.org/python-team/packages/pyusid.git Testsuite: autopkgtest-pkg-pybuild Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, pybuild-plugin-pyproject, python3-h5py, python3-numpy, python3-pil, python3-sidpy Package-List: python3-pyusid deb python optional arch=all Checksums-Sha1: 916696176ba96f7aefdd02d4076c24ffcf218446 54403049 pyusid_0.0.12.orig.tar.gz 534af8b322f716745a4334658be8e3ed7fc56b75 4068 pyusid_0.0.12-3.debian.tar.xz Checksums-Sha256: 303e4a348d572d5941ba61f16274653915b1dc19b3abdf749a243404c1997a1c 54403049 pyusid_0.0.12.orig.tar.gz 26f8de9002af2ca59b77f7c9212c8e33668d0a010aa0b65ce8233a29909ce71f 4068 pyusid_0.0.12-3.debian.tar.xz Files: c862536fd3dcdb5ba66a1d6d425d410a 54403049 pyusid_0.0.12.orig.tar.gz 2c10b5af18be6aff67778afa95a9ea57 4068 pyusid_0.0.12-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEtBU2D1kett1zr/uD0w3s0lmTIvwFAmfUPGcACgkQ0w3s0lmT Ivz0qg/8CGZsyUqrwBlLTuNOtT9YgrN3xkxfzapdufHD8VwGrnJNmTt+5TFYrPZC YvETqe1+7Vpmkg+bRBn3dOPkHpouii0rx7AculOWIfG66LffQosURYw8uXmj7/2k j/mNGc5wQ+AjLeBDrttmSL0bhORlxTnLPz2WrFgyH5lrblk+SDG/MW64ArXHnQ5Z H+khpTbQ+5A2bgl/u+74fHJnvCqWDwmzlaMBC7B5orp33JBwaC/Nmu3AGG89rjWN r9o8bC/CsqpQBC/Oi94WxYsh7g/ONa/15pdortaMSjQsaUQtX0c4P8vFsgk6N+Wh AzHk8SoJn34EFpH1W2bNadkKwXQXh2iGKabmlWRHEDtHyi98AGRN6Svyk0p3cFaB HYMXXiWKidgNgY4U5Sm+gpne8lbTn3Msd97xAoRU0jx2hqtIsWaZvtcc7n8srSRP g17tSKoaL7kfPpZ3JvKqtWhLABQ0BKi/6bJhHsG97U1xc/AGjTWjicA9N9j/MTN2 G6SOlMQFxU5XNSySwssT1illELMen/DMD+MTUMDdoMDb3bK3bJPkIqyQ4JrltS0O ADqxd7u+pfkbc+oTTzWNWHphSxJkKoEYO+y7w1Z3bEaejxQDQcGwaNrQZjljqbLL i8hEif0EgXTpuTfe4iXIfLsUtE0mKZqdm+KkVJTPz858jxhBKLM= =M5gv -----END PGP SIGNATURE----- Thu Sep 11 13:53:47 UTC 2025 I: Checking whether the package is not for us Thu Sep 11 13:53:47 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Thu Sep 11 13:53:47 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Thu Sep 11 13:55:36 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Sep 11 01:53:50 -12 2025 I: pbuilder-time-stamp: 1757598830 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pyusid_0.0.12-3.dsc] I: copying [./pyusid_0.0.12.orig.tar.gz] I: copying [./pyusid_0.0.12-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./pyusid_0.0.12-3.dsc: no acceptable signature found dpkg-source: info: extracting pyusid in pyusid-0.0.12 dpkg-source: info: unpacking pyusid_0.0.12.orig.tar.gz dpkg-source: info: unpacking pyusid_0.0.12-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-Remove-requirement-for-six-module.patch dpkg-source: info: applying 0002-Numpy-2-compatibility.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3532143/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='591c890e74bd48279067d820d82c5116' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3532143' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Ske6zFxO/pbuilderrc_37QH --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Ske6zFxO/b1 --logfile b1/build.log pyusid_0.0.12-3.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.12.43+deb13-cloud-arm64 #1 SMP Debian 6.12.43-1 (2025-08-27) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3532143/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, pybuild-plugin-pyproject, python3-h5py, python3-numpy, python3-pil, python3-sidpy dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 21045 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pil; however: Package python3-pil is not installed. pbuilder-satisfydepends-dummy depends on python3-sidpy; however: Package python3-sidpy is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-lyx{a} gdb{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libabsl20240722{a} libaec0{a} libaom3{a} libarchive-zip-perl{a} libavif16{a} libbabeltrace1{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdav1d7{a} libdebhelper-perl{a} libdebuginfod-common{a} libdebuginfod1t64{a} libdeflate0{a} libdw1t64{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgcrypt20{a} libgfortran5{a} libglib2.0-0t64{a} libgnutls30t64{a} libgpg-error0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-310{a} libhdf5-hl-310{a} libidn2-0{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-ui{a} libjson-c5{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblcms2-2{a} libldap2{a} liblerc4{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnorm1t64{a} libopenjp2-7{a} libp11-kit0{a} libpgm-5.3-0t64{a} libpipeline1{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsodium23{a} libsource-highlight-common{a} libsource-highlight4t64{a} libssh2-1t64{a} libsvtav1enc2{a} libsymspg2{a} libsz2{a} libtasn1-6{a} libtcl8.6{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2-16{a} libxrender1{a} libxslt1.1{a} libxss1{a} libyaml-0-2{a} libyuv0{a} libzmq5{a} libzopfli1{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-ase{a} python3-asttokens{a} python3-attr{a} python3-autocommand{a} python3-brotli{a} python3-build{a} python3-cffi-backend{a} python3-click{a} python3-cloudpickle{a} python3-comm{a} python3-contourpy{a} python3-coverage{a} python3-cycler{a} python3-cytoolz{a} python3-dask{a} python3-dateutil{a} python3-debugpy{a} python3-decorator{a} python3-distributed{a} python3-executing{a} python3-fonttools{a} python3-fs{a} python3-fsspec{a} python3-h5py{a} python3-h5py-serial{a} python3-inflect{a} python3-installer{a} python3-ipykernel{a} python3-ipython{a} python3-ipywidgets{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jedi{a} python3-jinja2{a} python3-joblib{a} python3-jupyter-client{a} python3-jupyter-core{a} python3-jupyterlab-widgets{a} python3-kiwisolver{a} python3-locket{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-nest-asyncio{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-parso{a} python3-partd{a} python3-pexpect{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-prompt-toolkit{a} python3-psutil{a} python3-ptyprocess{a} python3-pure-eval{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-scipy{a} python3-setuptools{a} python3-sidpy{a} python3-sklearn{a} python3-sklearn-lib{a} python3-sortedcontainers{a} python3-spglib{a} python3-stack-data{a} python3-sympy{a} python3-tblib{a} python3-threadpoolctl{a} python3-tk{a} python3-toolz{a} python3-tornado{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3-wheel{a} python3-widgetsnbextension{a} python3-yaml{a} python3-zict{a} python3-zipp{a} python3-zmq{a} python3-zopfli{a} python3.13{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} x11-common{a} The following packages are RECOMMENDED but will NOT be installed: curl git isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libgpg-error-l10n libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-babel python3-blosc python3-bs4 python3-cssselect python3-dropbox python3-html5lib python3-libarchive-c python3-olefile python3-pandas python3-paramiko python3-pooch python3-pygit2 python3-pytest python3-requests shared-mime-info wget xdg-user-dirs 0 packages upgraded, 253 newly installed, 0 to remove and 0 not upgraded. Need to get 140 MB of archives. After unpacking 595 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 libtext-charwidth-perl arm64 0.04-11+b4 [9652 B] Get: 2 http://deb.debian.org/debian forky/main arm64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get: 3 http://deb.debian.org/debian forky/main arm64 libproc2-0 arm64 2:4.0.4-9 [62.8 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 procps arm64 2:4.0.4-9 [871 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 ucf all 3.0052 [43.3 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 libdebuginfod-common all 0.192-4 [23.7 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 libpython3.13-minimal arm64 3.13.7-1 [857 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 python3.13-minimal arm64 3.13.7-1 [2001 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 python3-minimal arm64 3.13.5-1 [27.2 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 media-types all 13.0.0 [29.3 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 netbase all 6.5 [12.4 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 tzdata all 2025b-5 [260 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 readline-common all 8.3-3 [74.8 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 libpython3.13-stdlib arm64 3.13.7-1 [1895 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 python3.13 arm64 3.13.7-1 [761 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 libpython3-stdlib arm64 3.13.5-1 [10.2 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 python3 arm64 3.13.5-1 [28.2 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 python3-numpy-dev arm64 1:2.2.4+ds-1.2 [138 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 libblas3 arm64 3.12.1-7 [135 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 libgfortran5 arm64 15.2.0-3 [390 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 liblapack3 arm64 3.12.1-7 [1846 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 python3-numpy arm64 1:2.2.4+ds-1.2 [3620 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 openssl arm64 3.5.2-1 [1457 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 ca-certificates all 20250419 [162 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 32 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.1-2 [93.9 kB] Get: 36 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-1 [316 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 40 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 automake all 1:1.17-4 [862 kB] Get: 42 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 43 http://deb.debian.org/debian forky/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1 [982 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 45 http://deb.debian.org/debian forky/main arm64 libpng16-16t64 arm64 1.6.50-1 [275 kB] Get: 46 http://deb.debian.org/debian forky/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 fontconfig-config arm64 2.15.0-2.4 [318 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 libfontconfig1 arm64 2.15.0-2.4 [387 kB] Get: 51 http://deb.debian.org/debian forky/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 52 http://deb.debian.org/debian forky/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Get: 53 http://deb.debian.org/debian forky/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 54 http://deb.debian.org/debian forky/main arm64 libx11-data all 2:1.8.12-1 [343 kB] Get: 55 http://deb.debian.org/debian forky/main arm64 libx11-6 arm64 2:1.8.12-1 [795 kB] Get: 56 http://deb.debian.org/debian forky/main arm64 libxrender1 arm64 1:0.9.12-1 [27.0 kB] Get: 57 http://deb.debian.org/debian forky/main arm64 libxft2 arm64 2.3.6-1+b4 [51.6 kB] Get: 58 http://deb.debian.org/debian forky/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB] Get: 59 http://deb.debian.org/debian forky/main arm64 x11-common all 1:7.7+25 [217 kB] Get: 60 http://deb.debian.org/debian forky/main arm64 libxss1 arm64 1:1.2.3-1+b3 [17.1 kB] Get: 61 http://deb.debian.org/debian forky/main arm64 libtk8.6 arm64 8.6.17-1 [740 kB] Get: 62 http://deb.debian.org/debian forky/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-8 [537 kB] Get: 63 http://deb.debian.org/debian forky/main arm64 blt arm64 2.5.3+dfsg-8 [5984 B] Get: 64 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.26 [91.8 kB] Get: 65 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-5 [540 kB] Get: 66 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 67 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 68 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 69 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 70 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 71 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 72 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 73 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.5+dfsg-0.2 [582 kB] Get: 74 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 75 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 76 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 77 http://deb.debian.org/debian forky/main arm64 debhelper all 13.26 [939 kB] Get: 78 http://deb.debian.org/debian forky/main arm64 dh-python all 6.20250414 [116 kB] Get: 79 http://deb.debian.org/debian forky/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 80 http://deb.debian.org/debian forky/main arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [163 kB] Get: 81 http://deb.debian.org/debian forky/main arm64 fonts-lyx all 2.4.4-1 [190 kB] Get: 82 http://deb.debian.org/debian forky/main arm64 libdw1t64 arm64 0.192-4 [237 kB] Get: 83 http://deb.debian.org/debian forky/main arm64 libglib2.0-0t64 arm64 2.84.4-3 [1428 kB] Get: 84 http://deb.debian.org/debian forky/main arm64 libbabeltrace1 arm64 1.5.11-4+b2 [164 kB] Get: 85 http://deb.debian.org/debian forky/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Get: 86 http://deb.debian.org/debian forky/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Get: 87 http://deb.debian.org/debian forky/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 88 http://deb.debian.org/debian forky/main arm64 libgnutls30t64 arm64 3.8.9-3 [1375 kB] Get: 89 http://deb.debian.org/debian forky/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 90 http://deb.debian.org/debian forky/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 91 http://deb.debian.org/debian forky/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 92 http://deb.debian.org/debian forky/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 93 http://deb.debian.org/debian forky/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 94 http://deb.debian.org/debian forky/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 95 http://deb.debian.org/debian forky/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB] Get: 96 http://deb.debian.org/debian forky/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB] Get: 97 http://deb.debian.org/debian forky/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 98 http://deb.debian.org/debian forky/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Get: 99 http://deb.debian.org/debian forky/main arm64 libnghttp3-9 arm64 1.8.0-1 [63.2 kB] Get: 100 http://deb.debian.org/debian forky/main arm64 libngtcp2-16 arm64 1.11.0-1 [121 kB] Get: 101 http://deb.debian.org/debian forky/main arm64 libngtcp2-crypto-gnutls8 arm64 1.11.0-1 [28.2 kB] Get: 102 http://deb.debian.org/debian forky/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 103 http://deb.debian.org/debian forky/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Get: 104 http://deb.debian.org/debian forky/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 105 http://deb.debian.org/debian forky/main arm64 libcurl3t64-gnutls arm64 8.15.0-1 [355 kB] Get: 106 http://deb.debian.org/debian forky/main arm64 libjson-c5 arm64 0.18+ds-1 [45.2 kB] Get: 107 http://deb.debian.org/debian forky/main arm64 libdebuginfod1t64 arm64 0.192-4 [31.3 kB] Get: 108 http://deb.debian.org/debian forky/main arm64 libpython3.13 arm64 3.13.7-1 [1978 kB] Get: 109 http://deb.debian.org/debian forky/main arm64 libsource-highlight-common all 3.1.9-4.3 [77.5 kB] Get: 110 http://deb.debian.org/debian forky/main arm64 libsource-highlight4t64 arm64 3.1.9-4.3+b1 [294 kB] Get: 111 http://deb.debian.org/debian forky/main arm64 gdb arm64 16.3-5 [4692 kB] Get: 112 http://deb.debian.org/debian forky/main arm64 libabsl20240722 arm64 20240722.0-4 [452 kB] Get: 113 http://deb.debian.org/debian forky/main arm64 libaec0 arm64 1.1.4-2 [22.6 kB] Get: 114 http://deb.debian.org/debian forky/main arm64 libaom3 arm64 3.12.1-1 [1670 kB] Get: 115 http://deb.debian.org/debian forky/main arm64 libdav1d7 arm64 1.5.1-1 [252 kB] Get: 116 http://deb.debian.org/debian forky/main arm64 libgav1-1 arm64 0.19.0-3+b1 [491 kB] Get: 117 http://deb.debian.org/debian forky/main arm64 librav1e0.7 arm64 0.7.1-9+b2 [662 kB] Get: 118 http://deb.debian.org/debian forky/main arm64 libsvtav1enc2 arm64 2.3.0+dfsg-1 [1558 kB] Get: 119 http://deb.debian.org/debian forky/main arm64 libjpeg62-turbo arm64 1:2.1.5-4 [173 kB] Get: 120 http://deb.debian.org/debian forky/main arm64 libyuv0 arm64 0.0.1916.20250814-1 [137 kB] Get: 121 http://deb.debian.org/debian forky/main arm64 libavif16 arm64 1.3.0-1 [127 kB] Get: 122 http://deb.debian.org/debian forky/main arm64 libcurl4t64 arm64 8.15.0-1 [360 kB] Get: 123 http://deb.debian.org/debian forky/main arm64 libdeflate0 arm64 1.23-2 [42.4 kB] Get: 124 http://deb.debian.org/debian forky/main arm64 libfribidi0 arm64 1.0.16-1 [26.5 kB] Get: 125 http://deb.debian.org/debian forky/main arm64 libgpg-error0 arm64 1.55-2 [83.9 kB] Get: 126 http://deb.debian.org/debian forky/main arm64 libgcrypt20 arm64 1.11.2-2 [772 kB] Get: 127 http://deb.debian.org/debian forky/main arm64 libgraphite2-3 arm64 1.3.14-3 [70.3 kB] Get: 128 http://deb.debian.org/debian forky/main arm64 libharfbuzz0b arm64 11.4.5-1 [465 kB] Get: 129 http://deb.debian.org/debian forky/main arm64 libsz2 arm64 1.1.4-2 [8072 B] Get: 130 http://deb.debian.org/debian forky/main arm64 libhdf5-310 arm64 1.14.5+repack-3 [1155 kB] Get: 131 http://deb.debian.org/debian forky/main arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [66.1 kB] Get: 132 http://deb.debian.org/debian forky/main arm64 libimagequant0 arm64 4.4.0-3 [216 kB] Get: 133 http://deb.debian.org/debian forky/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB] Get: 134 http://deb.debian.org/debian forky/main arm64 libjs-bootstrap all 3.4.1+dfsg-6 [173 kB] Get: 135 http://deb.debian.org/debian forky/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 136 http://deb.debian.org/debian forky/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 137 http://deb.debian.org/debian forky/main arm64 liblcms2-2 arm64 2.16-2 [151 kB] Get: 138 http://deb.debian.org/debian forky/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB] Get: 139 http://deb.debian.org/debian forky/main arm64 liblzf1 arm64 3.6-4+b3 [10.1 kB] Get: 140 http://deb.debian.org/debian forky/main arm64 libnorm1t64 arm64 1.5.9+dfsg-3.1+b2 [205 kB] Get: 141 http://deb.debian.org/debian forky/main arm64 libopenjp2-7 arm64 2.5.3-2.1 [189 kB] Get: 142 http://deb.debian.org/debian forky/main arm64 libpgm-5.3-0t64 arm64 5.3.128~dfsg-2.1+b1 [152 kB] Get: 143 http://deb.debian.org/debian forky/main arm64 libqhull-r8.0 arm64 2020.2-7 [229 kB] Get: 144 http://deb.debian.org/debian forky/main arm64 libraqm0 arm64 0.10.3-1 [13.6 kB] Get: 145 http://deb.debian.org/debian forky/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [114 kB] Get: 146 http://deb.debian.org/debian forky/main arm64 libsodium23 arm64 1.0.18-1+b2 [121 kB] Get: 147 http://deb.debian.org/debian forky/main arm64 libsymspg2 arm64 2.6.0-3 [190 kB] Get: 148 http://deb.debian.org/debian forky/main arm64 libwebp7 arm64 1.5.0-0.1 [271 kB] Get: 149 http://deb.debian.org/debian forky/main arm64 libtiff6 arm64 4.7.0-4 [325 kB] Get: 150 http://deb.debian.org/debian forky/main arm64 libwebpdemux2 arm64 1.5.0-0.1 [113 kB] Get: 151 http://deb.debian.org/debian forky/main arm64 libwebpmux3 arm64 1.5.0-0.1 [125 kB] Get: 152 http://deb.debian.org/debian forky/main arm64 libxslt1.1 arm64 1.1.43-0.2 [145 kB] Get: 153 http://deb.debian.org/debian forky/main arm64 libyaml-0-2 arm64 0.2.5-2 [49.2 kB] Get: 154 http://deb.debian.org/debian forky/main arm64 libzmq5 arm64 4.3.5-1+b3 [253 kB] Get: 155 http://deb.debian.org/debian forky/main arm64 libzopfli1 arm64 1.0.3-3 [95.2 kB] Get: 156 http://deb.debian.org/debian forky/main arm64 python3-packaging all 25.0-1 [56.6 kB] Get: 157 http://deb.debian.org/debian forky/main arm64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 158 http://deb.debian.org/debian forky/main arm64 python3-wheel all 0.46.1-2 [21.7 kB] Get: 159 http://deb.debian.org/debian forky/main arm64 python3-build all 1.2.2-4 [36.2 kB] Get: 160 http://deb.debian.org/debian forky/main arm64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 161 http://deb.debian.org/debian forky/main arm64 pybuild-plugin-pyproject all 6.20250414 [11.8 kB] Get: 162 http://deb.debian.org/debian forky/main arm64 python-matplotlib-data all 3.10.1+dfsg1-4 [2737 kB] Get: 163 http://deb.debian.org/debian forky/main arm64 python3-all arm64 3.13.5-1 [1044 B] Get: 164 http://deb.debian.org/debian forky/main arm64 python3-decorator all 5.2.1-2 [33.0 kB] Get: 165 http://deb.debian.org/debian forky/main arm64 python3-scipy arm64 1.15.3-1.1 [15.1 MB] Get: 166 http://deb.debian.org/debian forky/main arm64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Get: 167 http://deb.debian.org/debian forky/main arm64 python3-spglib arm64 2.6.0-3 [52.9 kB] Get: 168 http://deb.debian.org/debian forky/main arm64 python3-dateutil all 2.9.0-4 [79.4 kB] Get: 169 http://deb.debian.org/debian forky/main arm64 python3-pil arm64 11.3.0-1 [507 kB] Get: 170 http://deb.debian.org/debian forky/main arm64 python3.13-tk arm64 3.13.7-1 [105 kB] Get: 171 http://deb.debian.org/debian forky/main arm64 python3-tk arm64 3.13.5-1 [9604 B] Get: 172 http://deb.debian.org/debian forky/main arm64 python3-pil.imagetk arm64 11.3.0-1 [81.3 kB] Get: 173 http://deb.debian.org/debian forky/main arm64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 174 http://deb.debian.org/debian forky/main arm64 python3-contourpy arm64 1.3.1-2 [191 kB] Get: 175 http://deb.debian.org/debian forky/main arm64 python3-cycler all 0.12.1-2 [9616 B] Get: 176 http://deb.debian.org/debian forky/main arm64 python3-brotli arm64 1.1.0-2+b7 [300 kB] Get: 177 http://deb.debian.org/debian forky/main arm64 python3-platformdirs all 4.3.7-1 [16.6 kB] Get: 178 http://deb.debian.org/debian forky/main arm64 python3-fs all 2.4.16-7 [95.2 kB] Get: 179 http://deb.debian.org/debian forky/main arm64 python3-lxml arm64 6.0.1-1 [1265 kB] Get: 180 http://deb.debian.org/debian forky/main arm64 python3-lz4 arm64 4.4.4+dfsg-1 [25.5 kB] Get: 181 http://deb.debian.org/debian forky/main arm64 python3-mpmath all 1.3.0-1 [419 kB] Get: 182 http://deb.debian.org/debian forky/main arm64 python3-sympy all 1.14.0-2 [4228 kB] Get: 183 http://deb.debian.org/debian forky/main arm64 python3-attr all 25.3.0-1 [69.5 kB] Get: 184 http://deb.debian.org/debian forky/main arm64 python3-ufolib2 all 0.17.1+dfsg1-1 [33.0 kB] Get: 185 http://deb.debian.org/debian forky/main arm64 python3-zopfli arm64 0.2.3.post1-1 [10.2 kB] Get: 186 http://deb.debian.org/debian forky/main arm64 unicode-data all 16.0.0-1 [9197 kB] Get: 187 http://deb.debian.org/debian forky/main arm64 python3-fonttools arm64 4.57.0-2 [1368 kB] Get: 188 http://deb.debian.org/debian forky/main arm64 python3-kiwisolver arm64 1.4.7-3+b1 [57.8 kB] Get: 189 http://deb.debian.org/debian forky/main arm64 python3-matplotlib arm64 3.10.1+dfsg1-4 [23.7 MB] Get: 190 http://deb.debian.org/debian forky/main arm64 python3-ase all 3.24.0-1 [1730 kB] Get: 191 http://deb.debian.org/debian forky/main arm64 python3-asttokens all 3.0.0-2 [20.2 kB] Get: 192 http://deb.debian.org/debian forky/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 193 http://deb.debian.org/debian forky/main arm64 python3-cffi-backend arm64 2.0.0~b1-1 [93.6 kB] Get: 194 http://deb.debian.org/debian forky/main arm64 python3-click all 8.2.0+0.really.8.1.8-1 [95.4 kB] Get: 195 http://deb.debian.org/debian forky/main arm64 python3-cloudpickle all 3.1.1-1 [26.6 kB] Get: 196 http://deb.debian.org/debian forky/main arm64 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 197 http://deb.debian.org/debian forky/main arm64 python3-comm all 0.2.1-1 [8104 B] Get: 198 http://deb.debian.org/debian forky/main arm64 python3-coverage arm64 7.8.2+dfsg1-1 [182 kB] Get: 199 http://deb.debian.org/debian forky/main arm64 python3-toolz all 1.0.0-2 [44.2 kB] Get: 200 http://deb.debian.org/debian forky/main arm64 python3-cytoolz arm64 1.0.1-1+b1 [269 kB] Get: 201 http://deb.debian.org/debian forky/main arm64 python3-fsspec all 2025.7.0-1 [221 kB] Get: 202 http://deb.debian.org/debian forky/main arm64 python3-locket all 1.0.0-2 [5820 B] Get: 203 http://deb.debian.org/debian forky/main arm64 python3-partd all 1.4.2-1 [15.4 kB] Get: 204 http://deb.debian.org/debian forky/main arm64 python3-yaml arm64 6.0.2-2 [122 kB] Get: 205 http://deb.debian.org/debian forky/main arm64 python3-dask all 2024.12.1+dfsg-2 [984 kB] Get: 206 http://deb.debian.org/debian forky/main arm64 python3-debugpy arm64 1.8.12+ds-1 [692 kB] Get: 207 http://deb.debian.org/debian forky/main arm64 python3-markupsafe arm64 2.1.5-1+b4 [14.1 kB] Get: 208 http://deb.debian.org/debian forky/main arm64 python3-jinja2 all 3.1.6-1 [107 kB] Get: 209 http://deb.debian.org/debian forky/main arm64 python3-msgpack arm64 1.0.3-3+b5 [77.4 kB] Get: 210 http://deb.debian.org/debian forky/main arm64 python3-psutil arm64 7.0.0-2 [220 kB] Get: 211 http://deb.debian.org/debian forky/main arm64 python3-sortedcontainers all 2.4.0-2 [31.9 kB] Get: 212 http://deb.debian.org/debian forky/main arm64 python3-tblib all 3.1.0-1 [13.8 kB] Get: 213 http://deb.debian.org/debian forky/main arm64 python3-tornado arm64 6.4.2-3 [350 kB] Get: 214 http://deb.debian.org/debian forky/main arm64 python3-urllib3 all 2.5.0-1 [116 kB] Get: 215 http://deb.debian.org/debian forky/main arm64 python3-zict all 3.0.0-4 [29.9 kB] Get: 216 http://deb.debian.org/debian forky/main arm64 python3-distributed all 2024.12.1+ds-1 [1162 kB] Get: 217 http://deb.debian.org/debian forky/main arm64 python3-executing all 2.2.0-0.3 [24.6 kB] Get: 218 http://deb.debian.org/debian forky/main arm64 python3-h5py-serial arm64 3.13.0-1+b1 [953 kB] Get: 219 http://deb.debian.org/debian forky/main arm64 python3-h5py all 3.13.0-1 [15.0 kB] Get: 220 http://deb.debian.org/debian forky/main arm64 python3-more-itertools all 10.8.0-1 [71.7 kB] Get: 221 http://deb.debian.org/debian forky/main arm64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 222 http://deb.debian.org/debian forky/main arm64 python3-inflect all 7.5.0-1 [33.0 kB] Get: 223 http://deb.debian.org/debian forky/main arm64 python3-parso all 0.8.4-1 [67.8 kB] Get: 224 http://deb.debian.org/debian forky/main arm64 python3-typeshed all 0.0~git20241223.ea91db2-4 [1531 kB] Get: 225 http://deb.debian.org/debian forky/main arm64 python3-jedi all 0.19.1+ds1-1 [691 kB] Get: 226 http://deb.debian.org/debian forky/main arm64 python3-matplotlib-inline all 0.1.7-1 [9032 B] Get: 227 http://deb.debian.org/debian forky/main arm64 python3-wcwidth all 0.2.13+dfsg1-1 [24.9 kB] Get: 228 http://deb.debian.org/debian forky/main arm64 python3-prompt-toolkit all 3.0.52-1 [280 kB] Get: 229 http://deb.debian.org/debian forky/main arm64 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get: 230 http://deb.debian.org/debian forky/main arm64 python3-pure-eval all 0.2.3-1 [11.2 kB] Get: 231 http://deb.debian.org/debian forky/main arm64 python3-stack-data all 0.6.3-1 [21.6 kB] Get: 232 http://deb.debian.org/debian forky/main arm64 python3-ptyprocess all 0.7.0-6 [14.5 kB] Get: 233 http://deb.debian.org/debian forky/main arm64 python3-pexpect all 4.9-3 [55.6 kB] Get: 234 http://deb.debian.org/debian forky/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 235 http://deb.debian.org/debian forky/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 236 http://deb.debian.org/debian forky/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 237 http://deb.debian.org/debian forky/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 238 http://deb.debian.org/debian forky/main arm64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 239 http://deb.debian.org/debian forky/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 240 http://deb.debian.org/debian forky/main arm64 python3-ipython all 8.35.0-1 [576 kB] Get: 241 http://deb.debian.org/debian forky/main arm64 python3-jupyter-core all 5.7.2-5 [35.3 kB] Get: 242 http://deb.debian.org/debian forky/main arm64 python3-zmq arm64 26.4.0-1 [163 kB] Get: 243 http://deb.debian.org/debian forky/main arm64 python3-jupyter-client all 8.6.3-2 [92.4 kB] Get: 244 http://deb.debian.org/debian forky/main arm64 python3-nest-asyncio all 1.5.4-1 [6248 B] Get: 245 http://deb.debian.org/debian forky/main arm64 python3-ipykernel all 6.30.1-1 [104 kB] Get: 246 http://deb.debian.org/debian forky/main arm64 python3-jupyterlab-widgets all 8.1.5-6 [171 kB] Get: 247 http://deb.debian.org/debian forky/main arm64 python3-widgetsnbextension all 8.1.5-6 [851 kB] Get: 248 http://deb.debian.org/debian forky/main arm64 python3-ipywidgets all 8.1.5-6 [105 kB] Get: 249 http://deb.debian.org/debian forky/main arm64 python3-joblib all 1.4.2-5 [216 kB] Get: 250 http://deb.debian.org/debian forky/main arm64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 251 http://deb.debian.org/debian forky/main arm64 python3-sklearn-lib arm64 1.4.2+dfsg-8 [3408 kB] Get: 252 http://deb.debian.org/debian forky/main arm64 python3-sklearn all 1.4.2+dfsg-8 [2248 kB] Get: 253 http://deb.debian.org/debian forky/main arm64 python3-sidpy all 0.12.3-3 [76.9 kB] Fetched 140 MB in 2s (66.5 MB/s) Preconfiguring packages ... 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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_arm64.deb ... Unpacking python3.13 (3.13.7-1) ... 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Setting up libjs-bootstrap (3.4.1+dfsg-6) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up libavif16:arm64 (1.3.0-1) ... Setting up liblapack3:arm64 (3.12.1-7) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.23.1-2+b1) ... Setting up libxrender1:arm64 (1:0.9.12-1) ... Setting up libtool (2.5.4-5) ... Setting up fontconfig-config (2.15.0-2.4) ... Setting up libwebpdemux2:arm64 (1.5.0-0.1) ... Setting up libxext6:arm64 (2:1.3.4-1+b3) ... Setting up libidn2-0:arm64 (2.3.8-4) ... Setting up libsource-highlight4t64:arm64 (3.1.9-4.3+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 150 added, 0 removed; done. Setting up libglib2.0-0t64:arm64 (2.84.4-3) ... No schema files found: doing nothing. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:arm64 (2.13.3+dfsg-1) ... Setting up libp11-kit0:arm64 (0.25.5-3) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ... Setting up ucf (3.0052) ... Setting up libbabeltrace1:arm64 (1.5.11-4+b2) ... Setting up libreadline8t64:arm64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up libharfbuzz0b:arm64 (11.4.5-1) ... Setting up libxss1:arm64 (1:1.2.3-1+b3) ... Setting up libfontconfig1:arm64 (2.15.0-2.4) ... Setting up libpython3.13-stdlib:arm64 (3.13.7-1) ... Setting up libpython3-stdlib:arm64 (3.13.5-1) ... Setting up libpython3.13:arm64 (3.13.7-1) ... Setting up libgnutls30t64:arm64 (3.8.9-3) ... Setting up libxft2:arm64 (2.3.6-1+b4) ... Setting up libzmq5:arm64 (4.3.5-1+b3) ... Setting up libdebuginfod-common (0.192-4) ... Setting up python3.13 (3.13.7-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:arm64 (8.6.17-1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up python3 (3.13.5-1) ... Setting up python3-sortedcontainers (2.4.0-2) ... Setting up python3-zipp (3.23.0-1) ... Setting up python3-click (8.2.0+0.really.8.1.8-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-markupsafe (2.1.5-1+b4) ... Setting up python3.13-tk (3.13.7-1) ... Setting up python3-platformdirs (4.3.7-1) ... Setting up python3-psutil (7.0.0-2) ... Setting up python3-zopfli (0.2.3.post1-1) ... Setting up python3-cloudpickle (3.1.1-1) ... Setting up python3-fs (2.4.16-7) ... Setting up python3-decorator (5.2.1-2) ... Setting up python3-jinja2 (3.1.6-1) ... Setting up python3-pygments (2.18.0+dfsg-2) ... Setting up python3-packaging (25.0-1) ... Setting up python3-wcwidth (0.2.13+dfsg1-1) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-typeshed (0.0~git20241223.ea91db2-4) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3) ... Setting up python3-nest-asyncio (1.5.4-1) ... Setting up python3-brotli (1.1.0-2+b7) ... Setting up libraqm0:arm64 (0.10.3-1) ... Setting up python3-cycler (0.12.1-2) ... Setting up python3-kiwisolver (1.4.7-3+b1) ... Setting up python3-typing-extensions (4.15.0-1) ... Setting up python3-numpy (1:2.2.4+ds-1.2) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.5.0-1) ... Setting up python3-jupyterlab-widgets (8.1.5-6) ... Setting up python3-lxml:arm64 (6.0.1-1) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up python3-toolz (1.0.0-2) ... Setting up python3-dateutil (2.9.0-4) ... Setting up python3-contourpy (1.3.1-2) ... Setting up python3-msgpack (1.0.3-3+b5) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-spglib (2.6.0-3) ... Setting up python3-zict (3.0.0-4) ... Setting up python3-locket (1.0.0-2) ... Setting up python3-jupyter-core (5.7.2-5) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.11.0-1) ... Setting up python3-cffi-backend:arm64 (2.0.0~b1-1) ... Setting up python3-cytoolz (1.0.1-1+b1) ... /usr/lib/python3/dist-packages/cytoolz/tests/test_inspect_args.py:505: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? assert num_required_args(Wrapped) is 1 Setting up python3-ptyprocess (0.7.0-6) ... Setting up python3-widgetsnbextension (8.1.5-6) ... Setting up python3-prompt-toolkit (3.0.52-1) ... Setting up dh-python (6.20250414) ... Setting up python3-partd (1.4.2-1) ... Setting up python3-more-itertools (10.8.0-1) ... Setting up python3-sympy (1.14.0-2) ... Setting up python3-attr (25.3.0-1) ... Setting up python3-tornado (6.4.2-3) ... Setting up python3-pure-eval (0.2.3-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... Setting up python3-scipy (1.15.3-1.1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-tblib (3.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up libcurl4t64:arm64 (8.15.0-1) ... Setting up python3-joblib (1.4.2-5) ... Setting up python3-parso (0.8.4-1) ... Setting up python3-lz4 (4.4.4+dfsg-1) ... Setting up python3-asttokens (3.0.0-2) ... Setting up blt (2.5.3+dfsg-8) ... Setting up python3-fsspec (2025.7.0-1) ... Setting up python3-typeguard (4.4.4-1) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up libcurl3t64-gnutls:arm64 (8.15.0-1) ... Setting up python3-sklearn-lib:arm64 (1.4.2+dfsg-8) ... Setting up python3-all (3.13.5-1) ... Setting up python3-coverage (7.8.2+dfsg1-1) ... Setting up python3-yaml (6.0.2-2) ... Setting up python3-tk:arm64 (3.13.5-1) ... Setting up debhelper (13.26) ... Setting up python3-wheel (0.46.1-2) ... Setting up python3-matplotlib-inline (0.1.7-1) ... Setting up python3-comm (0.2.1-1) ... Setting up python3-pil:arm64 (11.3.0-1) ... Setting up python3-inflect (7.5.0-1) ... Setting up python3-pil.imagetk:arm64 (11.3.0-1) ... Setting up python3-executing (2.2.0-0.3) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pexpect (4.9-3) ... Setting up python3-zmq (26.4.0-1) ... Setting up python3-sklearn (1.4.2+dfsg-8) ... Setting up libhdf5-310:arm64 (1.14.5+repack-3) ... Setting up python3-jupyter-client (8.6.3-2) ... Setting up python3-build (1.2.2-4) ... Setting up python3-stack-data (0.6.3-1) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ... Setting up libdebuginfod1t64:arm64 (0.192-4) ... Setting up python3-setuptools (78.1.1-0.1) ... Setting up python3-jedi (0.19.1+ds1-1) ... Setting up pybuild-plugin-pyproject (6.20250414) ... Setting up python3-dask (2024.12.1+dfsg-2) ... Setting up python3-h5py-serial (3.13.0-1+b1) ... Setting up python3-distributed (2024.12.1+ds-1) ... Setting up gdb (16.3-5) ... Setting up python3-ipython (8.35.0-1) ... Setting up python3-h5py (3.13.0-1) ... Setting up python3-ipywidgets (8.1.5-6) ... /usr/lib/python3/dist-packages/ipywidgets/widgets/tests/test_traits.py:61: SyntaxWarning: invalid escape sequence '\.' 'var(--my-color-\.)', # CSS variable with escaped characters Setting up python3-debugpy (1.8.12+ds-1) ... Setting up python3-ipykernel (6.30.1-1) ... Setting up python3-fonttools (4.57.0-2) ... Setting up python3-ufolib2 (0.17.1+dfsg1-1) ... Setting up python3-matplotlib (3.10.1+dfsg1-4) ... Setting up python3-ase (3.24.0-1) ... Setting up python3-sidpy (0.12.3-3) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pyusid-0.0.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pyusid_0.0.12-3_source.changes dpkg-buildpackage: info: source package pyusid dpkg-buildpackage: info: source version 0.0.12-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Roland Mas dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 dpkg-source: info: using options from pyusid-0.0.12/debian/source/options: --extend-diff-ignore=^[^/]+.(egg-info|dist-info)/ debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid * Building wheel... /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:135: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated !! ******************************************************************************** With Python 2.7 end-of-life, support for building universal wheels (i.e., wheels that support both Python 2 and Python 3) is being obviated. Please discontinue using this option, or if you still need it, file an issue with pypa/setuptools describing your use case. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. ******************************************************************************** !! self.finalize_options() running build running build_py creating build/lib/pyUSID copying pyUSID/__version__.py -> build/lib/pyUSID copying pyUSID/__init__.py -> build/lib/pyUSID creating build/lib/pyUSID/processing copying pyUSID/processing/process.py -> build/lib/pyUSID/processing copying pyUSID/processing/comp_utils.py -> build/lib/pyUSID/processing copying pyUSID/processing/__init__.py -> build/lib/pyUSID/processing creating build/lib/pyUSID/io copying pyUSID/io/usi_data.py -> build/lib/pyUSID/io copying pyUSID/io/reg_ref.py -> build/lib/pyUSID/io copying pyUSID/io/image.py -> build/lib/pyUSID/io copying pyUSID/io/dimension.py -> build/lib/pyUSID/io copying pyUSID/io/array_translator.py -> build/lib/pyUSID/io copying pyUSID/io/anc_build_utils.py -> build/lib/pyUSID/io copying pyUSID/io/__init__.py -> build/lib/pyUSID/io creating build/lib/pyUSID/io/hdf_utils copying pyUSID/io/hdf_utils/simple.py -> build/lib/pyUSID/io/hdf_utils copying pyUSID/io/hdf_utils/model.py -> build/lib/pyUSID/io/hdf_utils copying pyUSID/io/hdf_utils/base.py -> build/lib/pyUSID/io/hdf_utils copying pyUSID/io/hdf_utils/__init__.py -> build/lib/pyUSID/io/hdf_utils running egg_info creating pyUSID.egg-info writing pyUSID.egg-info/PKG-INFO writing dependency_links to pyUSID.egg-info/dependency_links.txt writing requirements to pyUSID.egg-info/requires.txt writing top-level names to pyUSID.egg-info/top_level.txt writing manifest file 'pyUSID.egg-info/SOURCES.txt' reading manifest file 'pyUSID.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'tests' adding license file 'LICENSE' writing manifest file 'pyUSID.egg-info/SOURCES.txt' installing to build/bdist.linux-aarch64/wheel running install running install_lib creating build/bdist.linux-aarch64/wheel creating build/bdist.linux-aarch64/wheel/pyUSID creating build/bdist.linux-aarch64/wheel/pyUSID/io creating build/bdist.linux-aarch64/wheel/pyUSID/io/hdf_utils copying build/lib/pyUSID/io/hdf_utils/__init__.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io/hdf_utils copying build/lib/pyUSID/io/hdf_utils/base.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io/hdf_utils copying build/lib/pyUSID/io/hdf_utils/model.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io/hdf_utils copying build/lib/pyUSID/io/hdf_utils/simple.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io/hdf_utils copying build/lib/pyUSID/io/__init__.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io copying build/lib/pyUSID/io/anc_build_utils.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io copying build/lib/pyUSID/io/array_translator.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io copying build/lib/pyUSID/io/dimension.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io copying build/lib/pyUSID/io/image.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io copying build/lib/pyUSID/io/reg_ref.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io copying build/lib/pyUSID/io/usi_data.py -> build/bdist.linux-aarch64/wheel/./pyUSID/io creating build/bdist.linux-aarch64/wheel/pyUSID/processing copying build/lib/pyUSID/processing/__init__.py -> build/bdist.linux-aarch64/wheel/./pyUSID/processing copying build/lib/pyUSID/processing/comp_utils.py -> build/bdist.linux-aarch64/wheel/./pyUSID/processing copying build/lib/pyUSID/processing/process.py -> build/bdist.linux-aarch64/wheel/./pyUSID/processing copying build/lib/pyUSID/__init__.py -> build/bdist.linux-aarch64/wheel/./pyUSID copying build/lib/pyUSID/__version__.py -> build/bdist.linux-aarch64/wheel/./pyUSID running install_egg_info Copying pyUSID.egg-info to build/bdist.linux-aarch64/wheel/./pyUSID-0.0.12.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/pyusid-0.0.12.dist-info/WHEEL creating '/build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/.tmp-x9egz4y7/pyusid-0.0.12-py2.py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'pyUSID/__init__.py' adding 'pyUSID/__version__.py' adding 'pyUSID/io/__init__.py' adding 'pyUSID/io/anc_build_utils.py' adding 'pyUSID/io/array_translator.py' adding 'pyUSID/io/dimension.py' adding 'pyUSID/io/image.py' adding 'pyUSID/io/reg_ref.py' adding 'pyUSID/io/usi_data.py' adding 'pyUSID/io/hdf_utils/__init__.py' adding 'pyUSID/io/hdf_utils/base.py' adding 'pyUSID/io/hdf_utils/model.py' adding 'pyUSID/io/hdf_utils/simple.py' adding 'pyUSID/processing/__init__.py' adding 'pyUSID/processing/comp_utils.py' adding 'pyUSID/processing/process.py' adding 'pyusid-0.0.12.dist-info/licenses/LICENSE' adding 'pyusid-0.0.12.dist-info/METADATA' adding 'pyusid-0.0.12.dist-info/WHEEL' adding 'pyusid-0.0.12.dist-info/top_level.txt' adding 'pyusid-0.0.12.dist-info/RECORD' removing build/bdist.linux-aarch64/wheel Successfully built pyusid-0.0.12-py2.py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build; python3.13 -m unittest discover -v test_legal (tests.io.hdf_utils.test_base.TestFindDataset.test_legal) ... ok test_many (tests.io.hdf_utils.test_base.TestGetH5ObjRefs.test_many) ... ok test_no_hdf5_datasets (tests.io.hdf_utils.test_base.TestGetH5ObjRefs.test_no_hdf5_datasets) ... ok test_non_string_names (tests.io.hdf_utils.test_base.TestGetH5ObjRefs.test_non_string_names) ... ok test_same_name (tests.io.hdf_utils.test_base.TestGetH5ObjRefs.test_same_name) ... ok test_single (tests.io.hdf_utils.test_base.TestGetH5ObjRefs.test_single) ... ok test_root_all_dsets (tests.io.hdf_utils.test_base.TestPrintTreeBEPS.test_root_all_dsets) ... ok test_root_main_dsets_only (tests.io.hdf_utils.test_base.TestPrintTreeBEPS.test_root_main_dsets_only) ... ok test_multi_level_rel_paths (tests.io.hdf_utils.test_base.TestPrintTreeNoMain.test_multi_level_rel_paths) ... ok test_multi_level_rel_paths_grp_b (tests.io.hdf_utils.test_base.TestPrintTreeNoMain.test_multi_level_rel_paths_grp_b) ... ok test_multi_level_tree (tests.io.hdf_utils.test_base.TestPrintTreeNoMain.test_multi_level_tree) ... ok test_multi_level_tree_grp_a (tests.io.hdf_utils.test_base.TestPrintTreeNoMain.test_multi_level_tree_grp_a) ... ok test_multi_level_tree_grp_b (tests.io.hdf_utils.test_base.TestPrintTreeNoMain.test_multi_level_tree_grp_b) ... ok test_multi_level_tree_main_dsets_only (tests.io.hdf_utils.test_base.TestPrintTreeNoMain.test_multi_level_tree_main_dsets_only) ... ok test_not_a_group (tests.io.hdf_utils.test_base.TestPrintTreeNoMain.test_not_a_group) ... ok test_single_level_rel_paths (tests.io.hdf_utils.test_base.TestPrintTreeNoMain.test_single_level_rel_paths) ... ok test_single_level_tree (tests.io.hdf_utils.test_base.TestPrintTreeNoMain.test_single_level_tree) ... ok test_dset (tests.io.hdf_utils.test_base.TestWriteBookKeepingAttrs.test_dset) ... ok test_file (tests.io.hdf_utils.test_base.TestWriteBookKeepingAttrs.test_file) ... ok test_group (tests.io.hdf_utils.test_base.TestWriteBookKeepingAttrs.test_group) ... ok test_invalid (tests.io.hdf_utils.test_base.TestWriteBookKeepingAttrs.test_invalid) ... ok test_invalid_sort (tests.io.hdf_utils.test_model.TestGetDimensionality.test_invalid_sort) ... ok test_legal_no_sort (tests.io.hdf_utils.test_model.TestGetDimensionality.test_legal_no_sort) ... ok test_legal_w_sort (tests.io.hdf_utils.test_model.TestGetDimensionality.test_legal_w_sort) ... ok test_not_hdf_dset (tests.io.hdf_utils.test_model.TestGetDimensionality.test_not_hdf_dset) ... ok test_invalid_types (tests.io.hdf_utils.test_model.TestGetSortOrder.test_invalid_types) ... ok test_reversed (tests.io.hdf_utils.test_model.TestGetSortOrder.test_reversed) ... ok test_simple (tests.io.hdf_utils.test_model.TestGetSortOrder.test_simple) ... ok test_all_dim_names_not_provided (tests.io.hdf_utils.test_model.TestGetUnitValues.test_all_dim_names_not_provided) ... ok test_dependent_dim (tests.io.hdf_utils.test_model.TestGetUnitValues.test_dependent_dim) ... ok test_illegal_dset (tests.io.hdf_utils.test_model.TestGetUnitValues.test_illegal_dset) ... ok test_illegal_key (tests.io.hdf_utils.test_model.TestGetUnitValues.test_illegal_key) ... ok test_incomp_dim_no_attr (tests.io.hdf_utils.test_model.TestGetUnitValues.test_incomp_dim_no_attr) ... ok test_source_pos_all (tests.io.hdf_utils.test_model.TestGetUnitValues.test_source_pos_all) ... ok test_source_pos_single (tests.io.hdf_utils.test_model.TestGetUnitValues.test_source_pos_single) ... ok test_source_spec_all (tests.io.hdf_utils.test_model.TestGetUnitValues.test_source_spec_all) ... ok test_source_spec_all_explicit (tests.io.hdf_utils.test_model.TestGetUnitValues.test_source_spec_all_explicit) ... ok test_source_spec_single (tests.io.hdf_utils.test_model.TestGetUnitValues.test_source_spec_single) ... ok test_sparse_samp_no_attr (tests.io.hdf_utils.test_model.TestGetUnitValues.test_sparse_samp_no_attr) ... ok test_sparse_samp_w_attr (tests.io.hdf_utils.test_model.TestGetUnitValues.test_sparse_samp_w_attr) ... ok test_pos_and_spec_may_may_not_be_provided (tests.io.hdf_utils.test_model.TestReshapeFromNDims.test_pos_and_spec_may_may_not_be_provided) ... ok test_pos_and_spec_provided (tests.io.hdf_utils.test_model.TestReshapeFromNDims.test_pos_and_spec_provided) ... ok test_dask_all (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_dask_all) ... ok test_dask_all_both_inds_order_flipped (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_dask_all_both_inds_order_flipped) ... ok test_dask_all_ordinary_1d_pos (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_dask_all_ordinary_1d_pos) ... ok test_dask_all_ordinary_1d_spec (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_dask_all_ordinary_1d_spec) ... ok test_dask_in_ordinary_1d_pos (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_dask_in_ordinary_1d_pos) ... ok test_dask_in_ordinary_1d_spec (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_dask_in_ordinary_1d_spec) ... ok test_dask_input (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_dask_input) ... ok test_dask_out_ordinary_1d_pos (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_dask_out_ordinary_1d_pos) ... ok test_dask_out_ordinary_1d_spec (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_dask_out_ordinary_1d_spec) ... 2D: False, Spec: False, Flip: False Main data shapes ND: (2,), 2D: (2, 1) [ 54 251] [[ 54] [251]] Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [2] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [1] Will attempt to reshape main dataset from: (2, 1) to [2, 1] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (2, 1) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [2] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [1] Will attempt to reshape main dataset from: (2, 1) to [2, 1] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (2, 1) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [0 1] New labels ordering: ['Position Dimension 0' 'Spectral Dimension 0'] Dataset now of shape: (2, 1) 2D: False, Spec: True, Flip: False Main data shapes ND: (2,), 2D: (1, 2) [183 172] [[183 172]] Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [1] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [2] Will attempt to reshape main dataset from: (1, 2) to [1, 2] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (1, 2) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [1] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [2] Will attempt to reshape main dataset from: (1, 2) to [1, 2] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (1, 2) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [0 1] New labels ordering: ['Position Dimension 0' 'Spectral Dimension 0'] Dataset now of shape: (1, 2) 2D: False, Spec: False, Flip: False Main data shapes ND: (2,), 2D: (2, 1) [234 157] [[234] [157]] Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [2] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [1] Will attempt to reshape main dataset from: (2, 1) to [2, 1] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (2, 1) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [2] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [1] Will attempt to reshape main dataset from: (2, 1) to [2, 1] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (2, 1) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [0 1] New labels ordering: ['Position Dimension 0' 'Spectral Dimension 0'] Dataset now of shape: (2, 1) 2D: False, Spec: True, Flip: False Main data shapes ND: (2,), 2D: (1, 2) [ 24 220] [[ 24 220]] Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [1] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [2] Will attempt to reshape main dataset from: (1, 2) to [1, 2] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (1, 2) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [1] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [2] Will attempt to reshape main dataset from: (1, 2) to [1, 2] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (1, 2) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [0 1] New labels ordering: ['Position Dimension 0' 'Spectral Dimension 0'] Dataset now of shape: (1, 2) 2D: False, Spec: False, Flip: False Main data shapes ND: (2,), 2D: (2, 1) [203 89] [[203] [ 89]] Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [2] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [1] Will attempt to reshape main dataset from: (2, 1) to [2, 1] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (2, 1) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [2] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [1] Will attempt to reshape main dataset from: (2, 1) to [2, 1] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (2, 1) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [0 1] New labels ordering: ['Position Dimension 0' 'Spectral Dimension 0'] Dataset now of shape: (2, 1) 2D: False, Spec: True, Flip: False Main data shapes ND: (2,), 2D: (1, 2) [ 41 217] [[ 41 217]] Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [1] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [2] Will attempt to reshape main dataset from: (1, 2) to [1, 2] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (1, 2) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [1] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [2] Will attempt to reshape main dataset from: (1, 2) to [1, 2]ok test_dask_output (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_dask_output) ... ok test_h5_already_sorted (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_h5_already_sorted) ... ok test_h5_beps_field (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_h5_beps_field) ... ok test_h5_both_inds_flipped (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_h5_both_inds_flipped) ... ok test_h5_manually_provided_anc_dsets_h5 (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_h5_manually_provided_anc_dsets_h5) ... ok test_h5_not_main_dset (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_h5_not_main_dset) ... ok test_numpy_both_inds_order_flipped (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_numpy_both_inds_order_flipped) ... ok test_numpy_ordinary (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_numpy_ordinary) ... ok test_numpy_ordinary_1d_pos (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_numpy_ordinary_1d_pos) ... ok test_numpy_ordinary_1d_spec (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_numpy_ordinary_1d_spec) ... ok test_numpy_ordinary_2d_pos (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_numpy_ordinary_2d_pos) ... ok test_numpy_ordinary_2d_spec (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_numpy_ordinary_2d_spec) ... After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (1, 2) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [0 1] New labels ordering: ['Position Dimension 0' 'Spectral Dimension 0'] Dataset now of shape: (1, 2) Position dimensions: ['X' 'Y'] Position sort order: [0 1] Spectroscopic Dimensions: ['Bias' 'Cycle'] Spectroscopic sort order: [0 1] Position dimensions (sort applied): ['X' 'Y'] Position dimensionality (sort applied): [5, 3] Spectroscopic dimensions (sort applied): ['Bias' 'Cycle'] Spectroscopic dimensionality (sort applied): [7, 2] Will attempt to reshape main dataset from: (15, 14) to [3, 5, 2, 7] After reshaping, labels are ['Y' 'X' 'Cycle' 'Bias'] Data shape is (3, 5, 2, 7) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [1 0 3 2] New labels ordering: ['X' 'Y' 'Bias' 'Cycle'] Dataset now of shape: (5, 3, 7, 2) Position dimensions: ['X' 'Y'] Position sort order: [0 1] Spectroscopic Dimensions: ['Bias' 'Cycle'] Spectroscopic sort order: [0 1] Position dimensions (sort applied): ['X' 'Y'] Position dimensionality (sort applied): [5, 3] Spectroscopic dimensions (sort applied): ['Bias' 'Cycle'] Spectroscopic dimensionality (sort applied): [7, 2] Will attempt to reshape main dataset from: (15, 14) to [3, 5, 2, 7] After reshaping, labels are ['Y' 'X' 'Cycle' 'Bias'] Data shape is (3, 5, 2, 7) Position dimensions: ['X' 'Y'] Position sort order: [0 1] Spectroscopic Dimensions: ['Bias' 'Cycle'] Spectroscopic sort order: [0 1] Position dimensions (sort applied): ['X' 'Y'] Position dimensionality (sort applied): [5, 3] Spectroscopic dimensions (sort applied): ['Bias' 'Cycle'] Spectroscopic dimensionality (sort applied): [7, 2] Will attempt to reshape main dataset from: (15, 14) to [3, 5, 2, 7] After reshaping, labels are ['Y' 'X' 'Cycle' 'Bias'] Data shape is (3, 5, 2, 7) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [1 0 3 2] New labels ordering: ['X' 'Y' 'Bias' 'Cycle'] Dataset now of shape: (5, 3, 7, 2) Position dimensions: ['X' 'Y'] Position sort order: [0 1] Spectroscopic Dimensions: ['Bias' 'Cycle'] Spectroscopic sort order: [0 1] Position dimensions (sort applied): ['X' 'Y'] Position dimensionality (sort applied): [5, 3] Spectroscopic dimensions (sort applied): ['Bias' 'Cycle'] Spectroscopic dimensionality (sort applied): [7, 2] Will attempt to reshape main dataset from: (15, 14) to [3, 5, 2, 7] After reshaping, labels are ['Y' 'X' 'Cycle' 'Bias'] Data shape is (3, 5, 2, 7) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [1 0 3 2] New labels ordering: ['X' 'Y' 'Bias' 'Cycle'] Dataset now of shape: (5, 3, 7, 2) Position dimensions: ['X' 'Y'] Position sort order: [0 1] Spectroscopic Dimensions: ['Bias' 'Cycle'] Spectroscopic sort order: [0 1] Position dimensions (sort applied): ['X' 'Y'] Position dimensionality (sort applied): [5, 3] Spectroscopic dimensions (sort applied): ['Bias' 'Cycle'] Spectroscopic dimensionality (sort applied): [7, 2] Will attempt to reshape main dataset from: (15, 14) to [3, 5, 2, 7] After reshaping, labels are ['Y' 'X' 'Cycle' 'Bias'] Data shape is (3, 5, 2, 7) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [1 0 3 2] New labels ordering: ['X' 'Y' 'Bias' 'Cycle'] Dataset now of shape: (5, 3, 7, 2) 2D: False, Spec: False, Flip: False Main data shapes ND: (2,), 2D: (2, 1) [204 222] [[204] [222]] Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [2] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [1] Will attempt to reshape main dataset from: (2, 1) to [2, 1] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (2, 1) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [2] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [1] Will attempt to reshape main dataset from: (2, 1) to [2, 1] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (2, 1) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [0 1] New labels ordering: ['Position Dimension 0' 'Spectral Dimension 0'] Dataset now of shape: (2, 1) 2D: False, Spec: True, Flip: False Main data shapes ND: (2,), 2D: (1, 2) [242 90] [[242 90]] Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [1] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [2] Will attempt to reshape main dataset from: (1, 2) to [1, 2] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (1, 2) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [1] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [2] Will attempt to reshape main dataset from: (1, 2) to [1, 2] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 0'] Data shape is (1, 2) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [0 1] New labels ordering: ['Position Dimension 0' 'Spectral Dimension 0'] Dataset now of shape: (1, 2) 2D: True, Spec: False, Flip: False Main data shapes ND: (2, 3), 2D: (6, 1) [[239 203 179] [122 180 184]] [[239] [203] [179] [122] [180] [184]] Position dimensions: ['Position Dimension 0' 'Position Dimension 1'] Position sort order: [0 1] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0' 'Position Dimension 1'] Position dimensionality (sort applied): [3, 2] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [1] Will attempt to reshape main dataset from: (6, 1) to [2, 3, 1] After reshaping, labels are ['Position Dimension 1' 'Position Dimension 0' 'Spectral Dimension 0'] Data shape is (2, 3, 1) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Position dimensions: ['Position Dimension 0' 'Position Dimension 1'] Position sort order: [0 1] Spectroscopic Dimensions: ['Spectral Dimension 0'] Spectroscopic sort order: [0] Position dimensions (sort applied): ['Position Dimension 0' 'Position Dimension 1'] Position dimensionality (sort applied): [3, 2] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0'] Spectroscopic dimensionality (sort applied): [1] Will attempt to reshape main dataset from: (6, 1) to [2, 3, 1] After reshaping, labels are ['Position Dimension 1' 'Position Dimension 0' 'Spectral Dimension 0'] Data shape is (2, 3, 1) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [1 0 2] New labels ordering: ['Position Dimension 0' 'Position Dimension 1' 'Spectral Dimension 0'] Dataset now of shape: (3, 2, 1) 2D: True, Spec: True, Flip: False Main data shapes ND: (2, 3), 2D: (1, 6) [[ 82 51 185] [122 45 18]] [[ 82 51 185 122 45 18]] Position dimensions: ['Position Dimension 0'] Position sort order:ok test_numpy_pos_inds_order_flipped (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_numpy_pos_inds_order_flipped) ... ok test_numpy_spec_inds_order_flipped (tests.io.hdf_utils.test_model.TestReshapeToNDims.test_numpy_spec_inds_order_flipped) ... ok test_dask_small (tests.io.hdf_utils.test_model.TestWriteMainDataset.test_dask_small) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_empty_main (tests.io.hdf_utils.test_model.TestWriteMainDataset.test_empty_main) ... ok test_numpy_small (tests.io.hdf_utils.test_model.TestWriteMainDataset.test_numpy_small) ... ok test_prod_sizes_mismatch (tests.io.hdf_utils.test_model.TestWriteMainDataset.test_prod_sizes_mismatch) ... ok test_write_main_both_existing_aux (tests.io.hdf_utils.test_model.TestWriteMainDataset.test_write_main_both_existing_aux) ... ok test_write_main_both_existing_aux_diff_file (tests.io.hdf_utils.test_model.TestWriteMainDataset.test_write_main_both_existing_aux_diff_file) ... ok test_write_main_existing_pos_aux (tests.io.hdf_utils.test_model.TestWriteMainDataset.test_write_main_existing_pos_aux) ... [0] Spectroscopic Dimensions: ['Spectral Dimension 0' 'Spectral Dimension 1'] Spectroscopic sort order: [0 1] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [1] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0' 'Spectral Dimension 1'] Spectroscopic dimensionality (sort applied): [3, 2] Will attempt to reshape main dataset from: (1, 6) to [1, 2, 3] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 1' 'Spectral Dimension 0'] Data shape is (1, 2, 3) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Position dimensions: ['Position Dimension 0'] Position sort order: [0] Spectroscopic Dimensions: ['Spectral Dimension 0' 'Spectral Dimension 1'] Spectroscopic sort order: [0 1] Position dimensions (sort applied): ['Position Dimension 0'] Position dimensionality (sort applied): [1] Spectroscopic dimensions (sort applied): ['Spectral Dimension 0' 'Spectral Dimension 1'] Spectroscopic dimensionality (sort applied): [3, 2] Will attempt to reshape main dataset from: (1, 6) to [1, 2, 3] After reshaping, labels are ['Position Dimension 0' 'Spectral Dimension 1' 'Spectral Dimension 0'] Data shape is (1, 2, 3) Going to put dimensions back in the same order as in the file: Axes will permuted in this order: [0 2 1] New labels ordering: ['Position Dimension 0' 'Spectral Dimension 0' 'Spectral Dimension 1'] Dataset now of shape: (1, 3, 2) h5 group and file OK quantity, units, main_data_name all OK Provided numpy or Dask array for main_data OK so far Passed all pre-tests for creating position datasets Indices: [[0 0] [0 1] [0 2] [0 3] [0 4] [1 0] [1 1] [1 2] [1 3] [1 4] [2 0] [2 1] [2 2] [2 3] [2 4]] Values: [[0. 0.] [0. 1.] [0. 2.] [0. 3.] [0. 4.] [1. 0.] [1. 1.] [1. 2.] [1. 3.] [1. 4.] [2. 0.] [2. 1.] [2. 2.] [2. 3.] [2. 4.]] Created position datasets! Passed all pre-tests for creating spectroscopic datasets Indices: [[0 0 0 0 0 0 0 1 1 1 1 1 1 1] [0 1 2 3 4 5 6 0 1 2 3 4 5 6]] Values: [[0. 0. 0. 0. 0. 0. 0. 1. 1. 1. 1. 1. 1. 1.] [0. 1. 2. 3. 4. 5. 6. 0. 1. 2. 3. 4. 5. 6.]] Created Spectroscopic datasets Created empty dataset: for writing Dask dataset: dask.array Dask array will be written to HDF5 dataset: "/Test_Main" in file: "test.h5" Wrote quantity and units attributes to main dataset Successfully linked datasets - dataset should be main now [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] h5 group and file OK quantity, units, main_data_name all OK Selected empty dataset creation. OK so far Passed all pre-tests for creating position datasets Indices: [[0 0] [0 1] [0 2] [0 3] [0 4] [1 0] [1 1] [1 2] [1 3] [1 4] [2 0] [2 1] [2 2] [2 3] [2 4]] Values: [[0. 0.] [0. 1.] [0. 2.] [0. 3.] [0. 4.] [1. 0.] [1. 1.] [1. 2.] [1. 3.] [1. 4.] [2. 0.] [2. 1.] [2. 2.] [2. 3.] [2. 4.]] Created position datasets! Passed all pre-tests for creating spectroscopic datasets Indices: [[0 0 0 0 0 0 0 1 1 1 1 1 1 1] [0 1 2 3 4 5 6 0 1 2 3 4 5 6]] Values: [[0. 0. 0. 0. 0. 0. 0. 1. 1. 1. 1. 1. 1. 1.] [0. 1. 2. 3. 4. 5. 6. 0. 1. 2. 3. 4. 5. 6.]] Created Spectroscopic datasets Created empty dataset for Main Wrote quantity and units attributes to main dataset Successfully linked datasets - dataset should be main now [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] h5 group and file OK quantity, units, main_data_name all OK Provided numpy or Dask array for main_data OK so far Passed all pre-tests for creating position datasets Indices: [[0 0] [0 1] [0 2] [0 3] [0 4] [1 0] [1 1] [1 2] [1 3] [1 4] [2 0] [2 1] [2 2] [2 3] [2 4]] Values: [[0. 0.] [0. 1.] [0. 2.] [0. 3.] [0. 4.] [1. 0.] [1. 1.] [1. 2.] [1. 3.] [1. 4.] [2. 0.] [2. 1.] [2. 2.] [2. 3.] [2. 4.]] Created position datasets! Passed all pre-tests for creating spectroscopic datasets Indices: [[0 0 0 0 0 0 0 1 1 1 1 1 1 1] [0 1 2 3 4 5 6 0 1 2 3 4 5 6]] Values: [[0. 0. 0. 0. 0. 0. 0. 1. 1. 1. 1. 1. 1. 1.] [0. 1. 2. 3. 4. 5. 6. 0. 1. 2. 3. 4. 5. 6.]] Created Spectroscopic datasets Created main dataset with provided data Wrote quantity and units attributes to main dataset Successfully linked datasets - dataset should be main now [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] h5 group and file OK quantity, units, main_data_name all OK Provided numpy or Dask array for main_data OK so far The shapes of the provided h5 position indices and values are OK The shapes of the provided h5 position indices and values are OK Created main dataset with provided data Wrote quantity and units attributes to main dataset Successfully linked datasets - dataset should be main now [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] h5 group and file OK quantity, units, main_data_name all OK Provided numpy or Dask array for main_data OK so far The shapes of the provided h5 position indices and values are OK Need to copy over ancillary datasets: and to destination group: which is in a different HDF5 file Creating new HDF5 dataset named: Position_Indices at: with kwargs: {'shape': (15, 2), 'dtype': dtype('uint32'), 'compression': None, 'chunks': None} dask.array will copy data from source dataset to new dataset Copying simple attributes of original dataset: to destination dataset: Creating new HDF5 dataset named: Position_Values at: with kwargs: {'shape': (15, 2), 'dtype': dtype(' to destination dataset: The shapes of the provided h5 position indices and values are OK Need to copy over ancillary datasets: and to destination group: which is in a different HDF5 file Creating new HDF5 dataset named: Spectroscopic_Indices at: with kwargs: {'shape': (2, 14), 'dtype': dtype('uint32'), 'compression': None, 'chunks': None} dask.array will copy data from source dataset to new dataset Copying simple attributes of original dataset: to destination dataset: Creating new HDF5 dataset named: Spectroscopic_Values at: with kwargs: {'shape': (2, 14), 'dtype': dtype(' to destination dataset: Created main dataset with provided data Wrote quantity and units attributes to main dataset Successfully linked datasets - dataset should be main now [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] h5 group and file OK quantity, units, main_data_name all OKok test_write_main_existing_pos_aux_diff_file (tests.io.hdf_utils.test_model.TestWriteMainDataset.test_write_main_existing_pos_aux_diff_file) ... ok test_write_main_existing_spec_aux (tests.io.hdf_utils.test_model.TestWriteMainDataset.test_write_main_existing_spec_aux) ... ok test_write_main_existing_spec_aux_diff_file (tests.io.hdf_utils.test_model.TestWriteMainDataset.test_write_main_existing_spec_aux_diff_file) ... ok test_existing (tests.io.hdf_utils.test_simple.TestAssignGroupIndex.test_existing) ... ok test_invalid_dtypes (tests.io.hdf_utils.test_simple.TestAssignGroupIndex.test_invalid_dtypes) ... ok test_new (tests.io.hdf_utils.test_simple.TestAssignGroupIndex.test_new) ... ok test_h5_main_non_dset_anc_names (tests.io.hdf_utils.test_simple.TestCheckAndLinkAncillary.test_h5_main_non_dset_anc_names) ... ok test_h5_main_not_dset (tests.io.hdf_utils.test_simple.TestCheckAndLinkAncillary.test_h5_main_not_dset) ... ok test_linking_main_legit_anc_names (tests.io.hdf_utils.test_simple.TestCheckAndLinkAncillary.test_linking_main_legit_anc_names) ... ok test_many_objs_to_many_names (tests.io.hdf_utils.test_simple.TestCheckAndLinkAncillary.test_many_objs_to_many_names) ... ok test_no_anc_refs_provided (tests.io.hdf_utils.test_simple.TestCheckAndLinkAncillary.test_no_anc_refs_provided) ... ok test_not_dset (tests.io.hdf_utils.test_simple.TestCheckAndLinkAncillary.test_not_dset) ... ok test_objs_and_refs_to_names (tests.io.hdf_utils.test_simple.TestCheckAndLinkAncillary.test_objs_and_refs_to_names) ... ok test_one_dset_to_name (tests.io.hdf_utils.test_simple.TestCheckAndLinkAncillary.test_one_dset_to_name) ... ok test_too_many_ancs (tests.io.hdf_utils.test_simple.TestCheckAndLinkAncillary.test_too_many_ancs) ... ok test_too_many_names (tests.io.hdf_utils.test_simple.TestCheckAndLinkAncillary.test_too_many_names) ... ok test_dset_matching_attrs (tests.io.hdf_utils.test_simple.TestCheckForMatchingAttrs.test_dset_matching_attrs) ... ok test_dset_no_attrs (tests.io.hdf_utils.test_simple.TestCheckForMatchingAttrs.test_dset_no_attrs) ... ok test_dset_one_mismatched_attrs (tests.io.hdf_utils.test_simple.TestCheckForMatchingAttrs.test_dset_one_mismatched_attrs) ... ok test_grp (tests.io.hdf_utils.test_simple.TestCheckForMatchingAttrs.test_grp) ... ok test_grp_mismatched_types_01 (tests.io.hdf_utils.test_simple.TestCheckForMatchingAttrs.test_grp_mismatched_types_01) ... ok test_grp_mismatched_types_02 (tests.io.hdf_utils.test_simple.TestCheckForMatchingAttrs.test_grp_mismatched_types_02) ... ok test_grp_mismatched_types_03 (tests.io.hdf_utils.test_simple.TestCheckForMatchingAttrs.test_grp_mismatched_types_03) ... ok test_grp_mismatched_types_04 (tests.io.hdf_utils.test_simple.TestCheckForMatchingAttrs.test_grp_mismatched_types_04) ... ok test_exact_match (tests.io.hdf_utils.test_simple.TestCheckForOld.test_exact_match) ... ok test_exact_match_02 (tests.io.hdf_utils.test_simple.TestCheckForOld.test_exact_match_02) ... ok test_fail_01 (tests.io.hdf_utils.test_simple.TestCheckForOld.test_fail_01) ... ok test_fail_02 (tests.io.hdf_utils.test_simple.TestCheckForOld.test_fail_02) ... ok test_invalid_target_dset (tests.io.hdf_utils.test_simple.TestCheckForOld.test_invalid_target_dset) ... ok test_invalid_types (tests.io.hdf_utils.test_simple.TestCheckForOld.test_invalid_types) ... ok test_subset_but_match (tests.io.hdf_utils.test_simple.TestCheckForOld.test_subset_but_match) ... ok test_valid_target_dset (tests.io.hdf_utils.test_simple.TestCheckForOld.test_valid_target_dset) ... ok test_anc_not_dsets (tests.io.hdf_utils.test_simple.TestCheckIfMain.test_anc_not_dsets) ... ok test_anc_shapes_not_matching (tests.io.hdf_utils.test_simple.TestCheckIfMain.test_anc_shapes_not_matching) ... ok test_illegal_01 (tests.io.hdf_utils.test_simple.TestCheckIfMain.test_illegal_01) ... ok test_invalid_str_attrs (tests.io.hdf_utils.test_simple.TestCheckIfMain.test_invalid_str_attrs) ... ok test_legal (tests.io.hdf_utils.test_simple.TestCheckIfMain.test_legal) ... ok test_missing_str_attrs (tests.io.hdf_utils.test_simple.TestCheckIfMain.test_missing_str_attrs) ... ok test_no_main_attrs (tests.io.hdf_utils.test_simple.TestCopyMainAttributes.test_no_main_attrs) ... ok test_valid (tests.io.hdf_utils.test_simple.TestCopyMainAttributes.test_valid) ... ok test_wrong_objects (tests.io.hdf_utils.test_simple.TestCopyMainAttributes.test_wrong_objects) ... ok test_diff_file_new_attrs_linked_dsets (tests.io.hdf_utils.test_simple.TestCreateEmptyDataset.test_diff_file_new_attrs_linked_dsets) ... ok test_diff_groups (tests.io.hdf_utils.test_simple.TestCreateEmptyDataset.test_diff_groups) ... ok test_existing_dset_name (tests.io.hdf_utils.test_simple.TestCreateEmptyDataset.test_existing_dset_name) ... ok test_invalid_types (tests.io.hdf_utils.test_simple.TestCreateEmptyDataset.test_invalid_types) ... ok test_same_group_new_attrs (tests.io.hdf_utils.test_simple.TestCreateEmptyDataset.test_same_group_new_attrs) ... ok test_create_indexed_group_invalid_types (tests.io.hdf_utils.test_simple.TestCreateIndexedGroup.test_create_indexed_group_invalid_types) ... ok test_empty_base_name (tests.io.hdf_utils.test_simple.TestCreateIndexedGroup.test_empty_base_name) ... ok test_first_group (tests.io.hdf_utils.test_simple.TestCreateIndexedGroup.test_first_group) ... ok test_second (tests.io.hdf_utils.test_simple.TestCreateIndexedGroup.test_second) ... ok test_w_suffix_ (tests.io.hdf_utils.test_simple.TestCreateIndexedGroup.test_w_suffix_) ... ok test_dash_in_name (tests.io.hdf_utils.test_simple.TestCreateResultsGroup.test_dash_in_name) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:778: UserWarning: tool_name should not contain the "-" character. Reformatted name from:Some-Tool to Some_Tool warn('tool_name should not contain the "-" character. Reformatted name from:{} to ' ok test_different_file (tests.io.hdf_utils.test_simple.TestCreateResultsGroup.test_different_file) ... ok test_empty_tool_name (tests.io.hdf_utils.test_simple.TestCreateResultsGroup.test_empty_tool_name) ... ok test_first (tests.io.hdf_utils.test_simple.TestCreateResultsGroup.test_first) ... ok test_invalid_types (tests.io.hdf_utils.test_simple.TestCreateResultsGroup.test_invalid_types) ... ok test_second (tests.io.hdf_utils.test_simple.TestCreateResultsGroup.test_second) ... ok test_legal (tests.io.hdf_utils.test_simple.TestFindResultsGroup.test_legal) ... ok test_no_dset (tests.io.hdf_utils.test_simple.TestFindResultsGroup.test_no_dset) ... ok test_no_such_tool (tests.io.hdf_utils.test_simple.TestFindResultsGroup.test_no_such_tool) ... ok test_not_string (tests.io.hdf_utils.test_simple.TestFindResultsGroup.test_not_string) ... ok test_results_in_diff_file (tests.io.hdf_utils.test_simple.TestFindResultsGroup.test_results_in_diff_file) ... ok test_results_in_diff_file_invalid_type (tests.io.hdf_utils.test_simple.TestFindResultsGroup.test_results_in_diff_file_invalid_type) ... ok test_invalid_type (tests.io.hdf_utils.test_simple.TestGetAllMain.test_invalid_type) ... ok test_legal (tests.io.hdf_utils.test_simple.TestGetAllMain.test_legal) ... ok test_illegal (tests.io.hdf_utils.test_simple.TestGetSourceDataset.test_illegal) ... ok test_invalid_type (tests.io.hdf_utils.test_simple.TestGetSourceDataset.test_invalid_type) ... ok test_legal (tests.io.hdf_utils.test_simple.TestGetSourceDataset.test_legal) ... ok test_anc_args_not_h5_dset (tests.io.hdf_utils.test_simple.TestLinkAsMain.test_anc_args_not_h5_dset) ... ok test_ind_vals_not_same_shape (tests.io.hdf_utils.test_simple.TestLinkAsMain.test_ind_vals_not_same_shape) ... ok test_pos_args_not_h5_dset (tests.io.hdf_utils.test_simple.TestLinkAsMain.test_pos_args_not_h5_dset) ... ok test_typical_attrs_not_specified (tests.io.hdf_utils.test_simple.TestLinkAsMain.test_typical_attrs_not_specified) ... ok test_typical_attrs_specified (tests.io.hdf_utils.test_simple.TestLinkAsMain.test_typical_attrs_specified) ... ok test_blah (tests.io.hdf_utils.test_simple.TestValidateAncDsetAttrs.test_blah) ... ok test_invalid_dtypes (tests.io.hdf_utils.test_simple.TestValidateAncH5Dsets.test_invalid_dtypes) ... ok test_invalid_spec_pos_bool (tests.io.hdf_utils.test_simple.TestValidateAncH5Dsets.test_invalid_spec_pos_bool) ... ok test_mismatched_anc_shapes (tests.io.hdf_utils.test_simple.TestValidateAncH5Dsets.test_mismatched_anc_shapes) ... ok test_valid_shapes (tests.io.hdf_utils.test_simple.TestValidateAncH5Dsets.test_valid_shapes) ... ok test_invalid_dims (tests.io.hdf_utils.test_simple.TestValidateDimsAgainstMAin.test_invalid_dims) ... ok test_invalid_dtypes (tests.io.hdf_utils.test_simple.TestValidateDimsAgainstMAin.test_invalid_dtypes) ... ok test_invalid_main_shape (tests.io.hdf_utils.test_simple.TestValidateDimsAgainstMAin.test_invalid_main_shape) ... ok test_multi_dims (tests.io.hdf_utils.test_simple.TestValidateDimsAgainstMAin.test_multi_dims) ... ok test_single_dim (tests.io.hdf_utils.test_simple.TestValidateDimsAgainstMAin.test_single_dim) ... ok test_illegal (tests.io.hdf_utils.test_simple.TestWriteIndValDsets.test_illegal) ... ok test_legal_bare_minimum_pos_f2s (tests.io.hdf_utils.test_simple.TestWriteIndValDsets.test_legal_bare_minimum_pos_f2s) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_legal_bare_minimum_pos_s2f (tests.io.hdf_utils.test_simple.TestWriteIndValDsets.test_legal_bare_minimum_pos_s2f) ... ok test_legal_bare_minimum_spec_f2s (tests.io.hdf_utils.test_simple.TestWriteIndValDsets.test_legal_bare_minimum_spec_f2s) ... ok test_legal_bare_minimum_spec_s2f (tests.io.hdf_utils.test_simple.TestWriteIndValDsets.test_legal_bare_minimum_spec_s2f) ... ok test_legal_override_steps_offsets_base_name (tests.io.hdf_utils.test_simple.TestWriteIndValDsets.test_legal_override_steps_offsets_base_name) ... ok test_3d_to_1d_pos_fastest_n_slowest (tests.io.hdf_utils.test_simple.TestWriteReducedAncDsets.test_3d_to_1d_pos_fastest_n_slowest) ... ok test_3d_to_1d_spec_fastest (tests.io.hdf_utils.test_simple.TestWriteReducedAncDsets.test_3d_to_1d_spec_fastest) ... ok test_3d_to_1d_spec_fastest_n_slowest (tests.io.hdf_utils.test_simple.TestWriteReducedAncDsets.test_3d_to_1d_spec_fastest_n_slowest) ... ok test_3d_to_1d_spec_slowest (tests.io.hdf_utils.test_simple.TestWriteReducedAncDsets.test_3d_to_1d_spec_slowest) ... ok test_3d_to_2d_spec_fastest_n_slowest (tests.io.hdf_utils.test_simple.TestWriteReducedAncDsets.test_3d_to_2d_spec_fastest_n_slowest) ... ok test_spec_1d_to_0d (tests.io.hdf_utils.test_simple.TestWriteReducedAncDsets.test_spec_1d_to_0d) ... ok test_spec_2d_to_1d (tests.io.hdf_utils.test_simple.TestWriteReducedAncDsets.test_spec_2d_to_1d) ... ok test_spec_2d_to_1d_new_file (tests.io.hdf_utils.test_simple.TestWriteReducedAncDsets.test_spec_2d_to_1d_new_file) ... ok test_all_dsets_as_dask (tests.io.test_array_translator.TestBaseOperations.test_all_dsets_as_dask) ... /usr/lib/python3/dist-packages/sidpy/sid/translator.py:42: FutureWarning: Consider using sidpy.Reader instead of sidpy.Translator if possible and contribute your reader to ScopeReaders warn('Consider using sidpy.Reader instead of sidpy.Translator if ' ok test_preexisting_file_OK (tests.io.test_array_translator.TestBaseOperations.test_preexisting_file_OK) ... /usr/lib/python3/dist-packages/sidpy/sid/translator.py:42: FutureWarning: Consider using sidpy.Reader instead of sidpy.Translator if possible and contribute your reader to ScopeReaders warn('Consider using sidpy.Reader instead of sidpy.Translator if ' /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_quick_dask_main_translation (tests.io.test_array_translator.TestBaseOperations.test_quick_dask_main_translation) ... ok test_quick_numpy_tranlsation_plus_parms (tests.io.test_array_translator.TestBaseOperations.test_quick_numpy_tranlsation_plus_parms) ... /usr/lib/python3/dist-packages/sidpy/sid/translator.py:42: FutureWarning: Consider using sidpy.Reader instead of sidpy.Translator if possible and contribute your reader to ScopeReaders warn('Consider using sidpy.Reader instead of sidpy.Translator if ' /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_quick_numpy_translation (tests.io.test_array_translator.TestBaseOperations.test_quick_numpy_translation) ... ok test_empty_name (tests.io.test_array_translator.TestExtraDatasets.test_empty_name) ... ok test_not_arrays (tests.io.test_array_translator.TestExtraDatasets.test_not_arrays) ... ok test_not_dicts (tests.io.test_array_translator.TestExtraDatasets.test_not_dicts) ... ok test_not_str_names (tests.io.test_array_translator.TestExtraDatasets.test_not_str_names) ... ok test_reserved_names (tests.io.test_array_translator.TestExtraDatasets.test_reserved_names) ... ok test_object_single (tests.io.test_array_translator.TestIllegalDimensions.test_object_single) ... ok test_objects (tests.io.test_array_translator.TestIllegalDimensions.test_objects) ... ok test_position (tests.io.test_array_translator.TestIllegalDimensions.test_position) ... ok test_spec (tests.io.test_array_translator.TestIllegalDimensions.test_spec) ... ok test_main_dset_1D (tests.io.test_array_translator.TestIllegalMainDataset.test_main_dset_1D) ... ok test_main_dset_2D (tests.io.test_array_translator.TestIllegalMainDataset.test_main_dset_2D) ... ok test_not_numpy_or_dask_array_main (tests.io.test_array_translator.TestIllegalMainDataset.test_not_numpy_or_dask_array_main) ... ok test_not_strings (tests.io.test_array_translator.TestIllegalStringParms.test_not_strings) ... ok test_dim_type_invalid_comparison (tests.io.test_dimension.TestDimType.test_dim_type_invalid_comparison) ... ok test_dim_type_valid_comparison (tests.io.test_dimension.TestDimType.test_dim_type_valid_comparison) ... ok test_default_mode (tests.io.test_dimension.TestDimension.test_default_mode) ... ok test_illegal_instantiation (tests.io.test_dimension.TestDimension.test_illegal_instantiation) ... ok test_invalid_mode (tests.io.test_dimension.TestDimension.test_invalid_mode) ... ok test_repr (tests.io.test_dimension.TestDimension.test_repr) ... ok test_values_as_array (tests.io.test_dimension.TestDimension.test_values_as_array) ... ok test_values_as_length (tests.io.test_dimension.TestDimension.test_values_as_length) ... ok test_basic_translate (tests.io.test_image_translator.TestBinning.test_basic_translate) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/image.py:48: FutureWarning: pyUSID.ImageTranslator will be removed shortly. Consider using SciFiReaders.ImageReader instead warn("pyUSID.ImageTranslator will be removed shortly. Consider using " ok test_custom_interp (tests.io.test_image_translator.TestBinning.test_custom_interp) ... ok test_float_parms (tests.io.test_image_translator.TestBinning.test_float_parms) ... ok test_invalid_dtype (tests.io.test_image_translator.TestBinning.test_invalid_dtype) ... ok test_invalid_interp (tests.io.test_image_translator.TestBinning.test_invalid_interp) ... ok test_neg_parms (tests.io.test_image_translator.TestBinning.test_neg_parms) ... ok test_single_default_interp (tests.io.test_image_translator.TestBinning.test_single_default_interp) ... ok test_too_many_dims (tests.io.test_image_translator.TestBinning.test_too_many_dims) ... ok test_tuple_default_interp (tests.io.test_image_translator.TestBinning.test_tuple_default_interp) ... ok test_basic_translate (tests.io.test_image_translator.TestFile.test_basic_translate) ... ok test_invalid_h5_path (tests.io.test_image_translator.TestFile.test_invalid_h5_path) ... ok test_output_h5_file_already_exists (tests.io.test_image_translator.TestFile.test_output_h5_file_already_exists) ... ok test_path_does_not_exist (tests.io.test_image_translator.TestFile.test_path_does_not_exist) ... ok test_path_not_str (tests.io.test_image_translator.TestFile.test_path_not_str) ... ok test_valid_h5_path (tests.io.test_image_translator.TestFile.test_valid_h5_path) ... ok test_basic_translate (tests.io.test_image_translator.TestImageTranslator.test_basic_translate) ... ok test_basic_translate (tests.io.test_image_translator.TestNormalization.test_basic_translate) ... ok test_normalize_and_default_interp (tests.io.test_image_translator.TestNormalization.test_normalize_and_default_interp) ... ok test_normalize_only (tests.io.test_image_translator.TestNormalization.test_normalize_only) ... ok test_color (tests.io.test_image_translator.TestReadImage.test_color) ... ok test_color_to_bw_image (tests.io.test_image_translator.TestReadImage.test_color_to_bw_image) ... ok test_text_complex_to_pillow (tests.io.test_image_translator.TestReadImage.test_text_complex_to_pillow) ... ok test_text_to_numpy_complex (tests.io.test_image_translator.TestReadImage.test_text_to_numpy_complex) ... ok test_text_to_numpy_simple (tests.io.test_image_translator.TestReadImage.test_text_to_numpy_simple) ... ok test_to_numpy (tests.io.test_image_translator.TestReadImage.test_to_numpy) ... ok test_to_pillow (tests.io.test_image_translator.TestReadImage.test_to_pillow) ... ok test_copy_reg_ref_reduced_dim (tests.io.test_reg_ref.TestRegRef.test_copy_reg_ref_reduced_dim) ... ok test_correct_USIDataset (tests.io.test_usi_dataset.TestEquality.test_correct_USIDataset) ... ok test_correct_h5_dataset (tests.io.test_usi_dataset.TestEquality.test_correct_h5_dataset) ... ok test_incorrect_USIDataset (tests.io.test_usi_dataset.TestEquality.test_incorrect_USIDataset) ... ok test_incorrect_h5_dataset (tests.io.test_usi_dataset.TestEquality.test_incorrect_h5_dataset) ... ok test_incorrect_object (tests.io.test_usi_dataset.TestEquality.test_incorrect_object) ... ok test_all_dims_sliced (tests.io.test_usi_dataset.TestGetDimsForSliceReal.test_all_dims_sliced) ... ok test_both_pos_dim_sliced (tests.io.test_usi_dataset.TestGetDimsForSliceReal.test_both_pos_dim_sliced) ... ok test_both_spec_dim_sliced (tests.io.test_usi_dataset.TestGetDimsForSliceReal.test_both_spec_dim_sliced) ... ok test_empty (tests.io.test_usi_dataset.TestGetDimsForSliceReal.test_empty) ... ok test_one_pos_one_spec_dims_sliced (tests.io.test_usi_dataset.TestGetDimsForSliceReal.test_one_pos_one_spec_dims_sliced) ... ok test_single_pos_dim_sliced (tests.io.test_usi_dataset.TestGetDimsForSliceReal.test_single_pos_dim_sliced) ... ok test_single_pos_dim_truncated (tests.io.test_usi_dataset.TestGetDimsForSliceReal.test_single_pos_dim_truncated) ... ok test_single_spec_dim_sliced (tests.io.test_usi_dataset.TestGetDimsForSliceReal.test_single_spec_dim_sliced) ... ok test_single_spec_dim_truncated (tests.io.test_usi_dataset.TestGetDimsForSliceReal.test_single_spec_dim_truncated) ... ok test_sorted_and_unsorted (tests.io.test_usi_dataset.TestGetNDimFormExistsReal.test_sorted_and_unsorted) ... ok test_get_pos_values (tests.io.test_usi_dataset.TestGetUnitValuesReal.test_get_pos_values) ... ok test_get_pos_values_illegal (tests.io.test_usi_dataset.TestGetUnitValuesReal.test_get_pos_values_illegal) ... ok test_get_spec_values (tests.io.test_usi_dataset.TestGetUnitValuesReal.test_get_spec_values) ... ok test_get_spec_values_illegal (tests.io.test_usi_dataset.TestGetUnitValuesReal.test_get_spec_values_illegal) ... ok test_both_pos_removed (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_both_pos_removed) ... ok test_empty_dict (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_empty_dict) ... ok test_incorrect_type (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_incorrect_type) ... ok test_negative_index (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_negative_index) ... ok test_non_existent_dim (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_non_existent_dim) ... ok test_one_pos_dim_removed (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_one_pos_dim_removed) ... ok test_one_pos_dim_sliced (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_one_pos_dim_sliced) ... ok test_out_of_bounds (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_out_of_bounds) ... ok test_pos_and_spec_sliced_list (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_pos_and_spec_sliced_list) ... ok test_two_pos_dim_sliced (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_two_pos_dim_sliced) ... ok test_two_pos_dim_sliced_list (tests.io.test_usi_dataset.TestPosSpecSlicesReal.test_two_pos_dim_sliced_list) ... ok test_one_pos (tests.io.test_usi_dataset.TestSimpleStaticVisualizationReal.test_one_pos) ... ok test_one_pos_one_spec (tests.io.test_usi_dataset.TestSimpleStaticVisualizationReal.test_one_pos_one_spec) ... ok test_one_spec (tests.io.test_usi_dataset.TestSimpleStaticVisualizationReal.test_one_spec) ... ok test_two_pos_simple (tests.io.test_usi_dataset.TestSimpleStaticVisualizationReal.test_two_pos_simple) ... ok test_two_spec (tests.io.test_usi_dataset.TestSimpleStaticVisualizationReal.test_two_spec) ... ok test_all_but_one_dims_sliced_2d_dask (tests.io.test_usi_dataset.TestSliceReal.test_all_but_one_dims_sliced_2d_dask) ... ok test_all_but_one_dims_sliced_2d_numpy (tests.io.test_usi_dataset.TestSliceReal.test_all_but_one_dims_sliced_2d_numpy) ... ok test_all_but_one_dims_sliced_nd_dask (tests.io.test_usi_dataset.TestSliceReal.test_all_but_one_dims_sliced_nd_dask) ... ok test_all_but_one_dims_sliced_nd_numpy (tests.io.test_usi_dataset.TestSliceReal.test_all_but_one_dims_sliced_nd_numpy) ... ok test_all_dims_sliced_2d_dask (tests.io.test_usi_dataset.TestSliceReal.test_all_dims_sliced_2d_dask) ... ok test_all_dims_sliced_2d_numpy (tests.io.test_usi_dataset.TestSliceReal.test_all_dims_sliced_2d_numpy) ... ok test_all_dims_sliced_nd_dask (tests.io.test_usi_dataset.TestSliceReal.test_all_dims_sliced_nd_dask) ... ok test_all_dims_sliced_nd_numpy (tests.io.test_usi_dataset.TestSliceReal.test_all_dims_sliced_nd_numpy) ... ok test_both_pos_removed_2d_dask (tests.io.test_usi_dataset.TestSliceReal.test_both_pos_removed_2d_dask) ... ok test_both_pos_removed_2d_numpy (tests.io.test_usi_dataset.TestSliceReal.test_both_pos_removed_2d_numpy) ... ok test_both_pos_removed_nd_dask (tests.io.test_usi_dataset.TestSliceReal.test_both_pos_removed_nd_dask) ... ok test_both_pos_removed_nd_numpy (tests.io.test_usi_dataset.TestSliceReal.test_both_pos_removed_nd_numpy) ... ok test_empty_2d_dask (tests.io.test_usi_dataset.TestSliceReal.test_empty_2d_dask) ... ok test_empty_2d_numpy (tests.io.test_usi_dataset.TestSliceReal.test_empty_2d_numpy) ... ok test_empty_nd_dask (tests.io.test_usi_dataset.TestSliceReal.test_empty_nd_dask) ... ok test_empty_nd_numpy (tests.io.test_usi_dataset.TestSliceReal.test_empty_nd_numpy) ... ok test_incorrect_type (tests.io.test_usi_dataset.TestSliceReal.test_incorrect_type) ... ok test_negative_index_2d_numpy (tests.io.test_usi_dataset.TestSliceReal.test_negative_index_2d_numpy) ... ok test_negative_index_nd_dask (tests.io.test_usi_dataset.TestSliceReal.test_negative_index_nd_dask) ... ok test_negative_index_nd_numpy (tests.io.test_usi_dataset.TestSliceReal.test_negative_index_nd_numpy) ... ok test_non_existent_dim (tests.io.test_usi_dataset.TestSliceReal.test_non_existent_dim) ... ok test_one_pos_dim_removed_2d_dask (tests.io.test_usi_dataset.TestSliceReal.test_one_pos_dim_removed_2d_dask) ... ok test_one_pos_dim_removed_2d_numpy (tests.io.test_usi_dataset.TestSliceReal.test_one_pos_dim_removed_2d_numpy) ... ok test_one_pos_dim_removed_nd_dask (tests.io.test_usi_dataset.TestSliceReal.test_one_pos_dim_removed_nd_dask) ... ok test_one_pos_dim_removed_nd_numpy (tests.io.test_usi_dataset.TestSliceReal.test_one_pos_dim_removed_nd_numpy) ... ok test_one_pos_dim_sliced_2d_dask (tests.io.test_usi_dataset.TestSliceReal.test_one_pos_dim_sliced_2d_dask) ... ok test_one_pos_dim_sliced_2d_numpy (tests.io.test_usi_dataset.TestSliceReal.test_one_pos_dim_sliced_2d_numpy) ... ok test_one_pos_dim_sliced_nd_dask (tests.io.test_usi_dataset.TestSliceReal.test_one_pos_dim_sliced_nd_dask) ... ok test_one_pos_dim_sliced_nd_numpy (tests.io.test_usi_dataset.TestSliceReal.test_one_pos_dim_sliced_nd_numpy) ... ok test_out_of_bounds (tests.io.test_usi_dataset.TestSliceReal.test_out_of_bounds) ... ok test_pos_and_spec_sliced_list_2d_dask (tests.io.test_usi_dataset.TestSliceReal.test_pos_and_spec_sliced_list_2d_dask) ... ok test_pos_and_spec_sliced_list_2d_numpy (tests.io.test_usi_dataset.TestSliceReal.test_pos_and_spec_sliced_list_2d_numpy) ... ok test_pos_and_spec_sliced_list_nd_dask (tests.io.test_usi_dataset.TestSliceReal.test_pos_and_spec_sliced_list_nd_dask) ... ok test_pos_and_spec_sliced_list_nd_numpy (tests.io.test_usi_dataset.TestSliceReal.test_pos_and_spec_sliced_list_nd_numpy) ... ok test_two_pos_dim_sliced_2d_dask (tests.io.test_usi_dataset.TestSliceReal.test_two_pos_dim_sliced_2d_dask) ... ok test_two_pos_dim_sliced_2d_numpy (tests.io.test_usi_dataset.TestSliceReal.test_two_pos_dim_sliced_2d_numpy) ... ok test_two_pos_dim_sliced_list_2d_dask (tests.io.test_usi_dataset.TestSliceReal.test_two_pos_dim_sliced_list_2d_dask) ... ok test_two_pos_dim_sliced_list_2d_numpy (tests.io.test_usi_dataset.TestSliceReal.test_two_pos_dim_sliced_list_2d_numpy) ... ok test_two_pos_dim_sliced_list_nd_dask (tests.io.test_usi_dataset.TestSliceReal.test_two_pos_dim_sliced_list_nd_dask) ... ok test_two_pos_dim_sliced_list_nd_numpy (tests.io.test_usi_dataset.TestSliceReal.test_two_pos_dim_sliced_list_nd_numpy) ... ok test_two_pos_dim_sliced_nd_dask (tests.io.test_usi_dataset.TestSliceReal.test_two_pos_dim_sliced_nd_dask) ... ok test_two_pos_dim_sliced_nd_numpy (tests.io.test_usi_dataset.TestSliceReal.test_two_pos_dim_sliced_nd_numpy) ... ok test_get_current_sorting (tests.io.test_usi_dataset.TestSortingReal.test_get_current_sorting) ... ok test_toggle_sorting (tests.io.test_usi_dataset.TestSortingReal.test_toggle_sorting) ... ok test_string_representation (tests.io.test_usi_dataset.TestStringRepr.test_string_representation) ... ok test_1D (tests.io.test_write_utils.TestBuildIndValMatrices.test_1D) ... ok test_1D_pos (tests.io.test_write_utils.TestBuildIndValMatrices.test_1D_pos) ... ok test_3D (tests.io.test_write_utils.TestBuildIndValMatrices.test_3D) ... ok test_empty (tests.io.test_write_utils.TestBuildIndValMatrices.test_empty) ... ok test_invalid_inputs (tests.io.test_write_utils.TestBuildIndValMatrices.test_invalid_inputs) ... ok test_invalid_types (tests.io.test_write_utils.TestCalcChunks.test_invalid_types) ... ok test_no_unit_chunk (tests.io.test_write_utils.TestCalcChunks.test_no_unit_chunk) ... ok test_no_unit_chunk_max_mem (tests.io.test_write_utils.TestCalcChunks.test_no_unit_chunk_max_mem) ... ok test_shape_mismatch (tests.io.test_write_utils.TestCalcChunks.test_shape_mismatch) ... ok test_unit_chunk (tests.io.test_write_utils.TestCalcChunks.test_unit_chunk) ... ok test_unit_chunk_max_mem (tests.io.test_write_utils.TestCalcChunks.test_unit_chunk_max_mem) ... ok test_unit_not_iterable (tests.io.test_write_utils.TestCalcChunks.test_unit_not_iterable) ... ok test_invalid_inputs (tests.io.test_write_utils.TestCreateSpecIndsFromVals.test_invalid_inputs) ... ok test_legal (tests.io.test_write_utils.TestCreateSpecIndsFromVals.test_legal) ... ok test_legal_multi_dim (tests.io.test_write_utils.TestGetAuxDsetSlicing.test_legal_multi_dim) ... ok test_legal_single_dim (tests.io.test_write_utils.TestGetAuxDsetSlicing.test_legal_single_dim) ... ok test_odd_input (tests.io.test_write_utils.TestGetAuxDsetSlicing.test_odd_input) ... ok test_2_dims (tests.io.test_write_utils.TestMakeIndicesMatrix.test_2_dims) ... ok test_3_dims (tests.io.test_write_utils.TestMakeIndicesMatrix.test_3_dims) ... ok test_dim_w_val_1 (tests.io.test_write_utils.TestMakeIndicesMatrix.test_dim_w_val_1) ... ok test_empty_list (tests.io.test_write_utils.TestMakeIndicesMatrix.test_empty_list) ... ok test_just_size_of_one_dim (tests.io.test_write_utils.TestMakeIndicesMatrix.test_just_size_of_one_dim) ... ok test_matrix_1_dims (tests.io.test_write_utils.TestMakeIndicesMatrix.test_matrix_1_dims) ... ok test_non_int_dim_sizes (tests.io.test_write_utils.TestMakeIndicesMatrix.test_non_int_dim_sizes) ... ok test_single_value_dimension_int_input (tests.io.test_write_utils.TestMakeIndicesMatrix.test_single_value_dimension_int_input) ... ok test_single_value_dimension_list_input (tests.io.test_write_utils.TestMakeIndicesMatrix.test_single_value_dimension_list_input) ... ok test_weird_inputs (tests.io.test_write_utils.TestMakeIndicesMatrix.test_weird_inputs) ... ok test_compute (tests.processing.test_process.TestCoreProcessNoTest.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_tfunc (tests.processing.test_process.TestCoreProcessNoTest.test_tfunc) ... ok test_compute (tests.processing.test_process.TestCoreProcessWDuplicateResultsOverride.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' Provided numpy or Dask array for main_data OK so far The shapes of the provided h5 position indices and values are OK Passed all pre-tests for creating spectroscopic datasets Indices: [[0 0 0 0 0 0 0 1 1 1 1 1 1 1] [0 1 2 3 4 5 6 0 1 2 3 4 5 6]] Values: [[0. 0. 0. 0. 0. 0. 0. 1. 1. 1. 1. 1. 1. 1.] [0. 1. 2. 3. 4. 5. 6. 0. 1. 2. 3. 4. 5. 6.]] Created Spectroscopic datasets Created main dataset with provided data Wrote quantity and units attributes to main dataset Successfully linked datasets - dataset should be main now [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] h5 group and file OK quantity, units, main_data_name all OK Provided numpy or Dask array for main_data OK so far The shapes of the provided h5 position indices and values are OK Need to copy over ancillary datasets: and to destination group: which is in a different HDF5 file Creating new HDF5 dataset named: Position_Indices at: with kwargs: {'shape': (15, 2), 'dtype': dtype('uint32'), 'compression': None, 'chunks': None} dask.array will copy data from source dataset to new dataset Copying simple attributes of original dataset: to destination dataset: Creating new HDF5 dataset named: Position_Values at: with kwargs: {'shape': (15, 2), 'dtype': dtype(' to destination dataset: Passed all pre-tests for creating spectroscopic datasets Indices: [[0 0 0 0 0 0 0 1 1 1 1 1 1 1] [0 1 2 3 4 5 6 0 1 2 3 4 5 6]] Values: [[0. 0. 0. 0. 0. 0. 0. 1. 1. 1. 1. 1. 1. 1.] [0. 1. 2. 3. 4. 5. 6. 0. 1. 2. 3. 4. 5. 6.]] Created Spectroscopic datasets Created main dataset with provided data Wrote quantity and units attributes to main dataset Successfully linked datasets - dataset should be main now [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] h5 group and file OK quantity, units, main_data_name all OK Provided numpy or Dask array for main_data OK so far Passed all pre-tests for creating position datasets Indices: [[0 0] [0 1] [0 2] [0 3] [0 4] [1 0] [1 1] [1 2] [1 3] [1 4] [2 0] [2 1] [2 2] [2 3] [2 4]] Values: [[0. 0.] [0. 1.] [0. 2.] [0. 3.] [0. 4.] [1. 0.] [1. 1.] [1. 2.] [1. 3.] [1. 4.] [2. 0.] [2. 1.] [2. 2.] [2. 3.] [2. 4.]] Created position datasets! The shapes of the provided h5 position indices and values are OK Created main dataset with provided data Wrote quantity and units attributes to main dataset Successfully linked datasets - dataset should be main now [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] h5 group and file OK quantity, units, main_data_name all OK Provided numpy or Dask array for main_data OK so far Passed all pre-tests for creating position datasets Indices: [[0 0] [0 1] [0 2] [0 3] [0 4] [1 0] [1 1] [1 2] [1 3] [1 4] [2 0] [2 1] [2 2] [2 3] [2 4]] Values: [[0. 0.] [0. 1.] [0. 2.] [0. 3.] [0. 4.] [1. 0.] [1. 1.] [1. 2.] [1. 3.] [1. 4.] [2. 0.] [2. 1.] [2. 2.] [2. 3.] [2. 4.]] Created position datasets! The shapes of the provided h5 position indices and values are OK Need to copy over ancillary datasets: and to destination group: which is in a different HDF5 file Creating new HDF5 dataset named: Spectroscopic_Indices at: with kwargs: {'shape': (2, 14), 'dtype': dtype('uint32'), 'compression': None, 'chunks': None} dask.array will copy data from source dataset to new dataset Copying simple attributes of original dataset: to destination dataset: Creating new HDF5 dataset named: Spectroscopic_Values at: with kwargs: {'shape': (2, 14), 'dtype': dtype(' to destination dataset: Created main dataset with provided data Wrote quantity and units attributes to main dataset Successfully linked datasets - dataset should be main now [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] ['Meh'] ['Meh'] [[0 0] [1 0] [2 0] [0 1] [1 1] [2 1]] [[0 1 2 0 1 2] [0 0 0 1 1 1]] [[0 1 0 1 0 1] [0 0 1 1 2 2]] [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] [[0 0] [1 0] [2 0] [3 0] [4 0] [0 1] [1 1] [2 1] [3 1] [4 1] [0 2] [1 2] [2 2] [3 2] [4 2]] [[0 1 2 3 4 5 6 0 1 2 3 4 5 6] [0 0 0 0 0 0 0 1 1 1 1 1 1 1]] [[0]] False False 0 0 254 254 [[ 0 0] [ 1 0] [ 2 0] ... [125 255] [126 255] [127 255]] [[0]] [2 2] [2 2] NEAREST NEAREST False False 0 0 254 254 [[ 0 0] [ 1 0] [ 2 0] ... [ 61 127] [ 62 127] [ 63 127]] [[0]] [2 2] [2 2] BICUBIC BICUBIC False False 28 28 233 233 [[ 0 0] [ 1 0] [ 2 0] ... [ 61 127] [ 62 127] [ 63 127]] [[0]] [1 2] [1 2] BICUBIC BICUBIC False False 0 0 255 255 [[ 0 0] [ 1 0] [ 2 0] ... [125 127] [126 127] [127 127]] [[0]] False False 0 0 254 254 [[ 0 0] [ 1 0] [ 2 0] ... [125 255] [126 255] [127 255]] [[0]] False False 0 0 254 254 [[ 0 0] [ 1 0] [ 2 0] ... [125 255] [126 255] [127 255]] [[0]] False False 0 0 254 254 [[ 0 0] [ 1 0] [ 2 0] ... [125 255] [126 255] [127 255]] [[0]] False False 0 0 254 254 [[ 0 0] [ 1 0] [ 2 0] ... [125 255] [126 255] [127 255]] [[0]] False False 0 0 254 254 [[ 0 0] [ 1 0] [ 2 0] ... [125 255] [126 255] [127 255]] [[0]] [2 2] [2 2] BICUBIC BICUBIC True True 0.0 0.0 1.0 1.0 [[ 0 0] [ 1 0] [ 2 0] ... [ 61 127] [ 62 127] [ 63 127]] [[0]] True True 0.0 0.0 1.0 1.0 [[ 0 0] [ 1 0] [ 2 0] ... [125 255] [126 255] [127 255]] (3, 5, 2, 7) Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file This class does NOT support interruption and resuming of computations. In order to enable this feature, simply implement the _get_existing_datasets() function Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file/build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestCoreProcessWExistResultsDiffParms.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_duplicate_partial_results (tests.processing.test_process.TestCoreProcessWExistResultsDiffParms.test_duplicate_partial_results) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestCoreProcessWExistingPartResults.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestCoreProcessWExistingResults.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestCoreProcessWTest.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_tfunc (tests.processing.test_process.TestCoreProcessWTest.test_tfunc) ... ok test_invalid_parms_dict (tests.processing.test_process.TestInvalidInitialization.test_invalid_parms_dict) ... ok test_invalid_process_name (tests.processing.test_process.TestInvalidInitialization.test_invalid_process_name) ... ok test_no_map_func (tests.processing.test_process.TestInvalidInitialization.test_no_map_func) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_none_parms_dict (tests.processing.test_process.TestInvalidInitialization.test_none_parms_dict) ... ok test_not_main_dataset (tests.processing.test_process.TestInvalidInitialization.test_not_main_dataset) ... ok test_read_only_h5_main (tests.processing.test_process.TestInvalidInitialization.test_read_only_h5_main) ... ok test_read_only_h5_parent_group (tests.processing.test_process.TestInvalidInitialization.test_read_only_h5_parent_group) ... ok test_compute (tests.processing.test_process.TestMultiBatchCompute.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_tfunc (tests.processing.test_process.TestMultiBatchCompute.test_tfunc) ... ok test_compute (tests.processing.test_process.TestProcLastPartialResult.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' Note: Mean_Val has already been performed with the same parameters before. These results will be returned by compute() by default. Set override to True to force fresh computation [] This class (likely) supports interruption and resuming of computations! If you are operating in a python console, press Ctrl+C or Cmd+C to abort If you are in a Jupyter notebook, click on "Kernel">>"Interrupt" If you are operating on a cluster and your job gets killed, re-run the job to resume Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file This class (likely) supports interruption and resuming of computations! If you are operating in a python console, press Ctrl+C or Cmd+C to abort If you are in a Jupyter notebook, click on "Kernel">>"Interrupt" If you are operating on a cluster and your job gets killed, re-run the job to resume Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Note: Mean_Val has already been performed PARTIALLY with the same parameters. compute() will resuming computation in the last group below. To choose a different group call use_patial_computation()Set override to True to force fresh computation or resume from a data group besides the last in the list. [] Resuming computation in group: /Raw_Measurement/source_main-Mean_Val_000 Resuming computation. 46% completed already This class (likely) supports interruption and resuming of computations! If you are operating in a python console, press Ctrl+C or Cmd+C to abort If you are in a Jupyter notebook, click on "Kernel">>"Interrupt" If you are operating on a cluster and your job gets killed, re-run the job to resume Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Note: Mean_Val has already been performed with the same parameters before. These results will be returned by compute() by default. Set override to True to force fresh computation [] Returned previously computed results at /Raw_Measurement/source_main-Mean_Val_000 Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file This class does NOT support interruption and resuming of computations. In order to enable this feature, simply implement the _get_existing_datasets() function Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file This class does NOT support interruption and resuming of computations. In order to enable this feature, simply implement the _get_existing_datasets() function Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Creating HDF5 group and datasets to hold results Among the 15 positions in this dataset, the following positions need to be computed: [ 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14]. Each rank is required to work on 15 of the 15 (remaining) positions in this dataset. Rank 0 will read positions 0 to 15 of 15 This class does NOT support interruption and resuming of computations. In order to enable this feature, simply implement the _get_existing_datasets() function Rank: 0 - with nothing loaded has 21.05 GB free memory Rank 0 will read positions: [0 1 2 3 4 5] Rank 0 will read 672.0 bytes of the SOURCE dataset. Rank: 0 available memory: 21.05 GB. 10 workers on this socket will in total read ~ 6.56 kB. Rank: 0 - with only raw data loaded has 21.05 GB free memory Rank 0 at Process class' default _unit_computation() that will call parallel_compute() Number of CPU free cores set to: 2 given that the CPU has 12 logical cores. 10 cores requested. computational jobs per core = 1. For short computations, each core must have at least 20 jobs to warrant parallel computation. Computations are not lengthy. Not enough jobs per core. Reducing cores to 1 Rank 0 starting computing on 1 cores (requested 10 cores) Rank 0 computing serially ... Rank 0 - computed chunk in 0.0 msec or 0.0 msec per pixel. Average: 0.0 msec per pixel. Rank: 0 - now holding onto raw data + results has 21.05 GB free memory Rank 0 - wrote its 6 pixel chunk in 0.0 msec Rank 0 - 40% complete. Time remaining: 0.0 msec Rank 0 will read positions: [ 6 7 8 9 10 11] Rank 0 will read 672.0 bytes of the SOURCE dataset. Rank: 0 available memory: 21.05 GB. 10 workers on this socket will in total read ~ 6.56 kB. Rank 0 at Process class' default _unit_computation() that will call parallel_compute() Number of CPU free cores set to: 2 given that the CPU has 12 logical cores. 10 cores requested. computational jobs per core = 1. For short computations, each core must have at least 20 jobs to warrant parallel computation. Computations are not lengthy. Not enough jobs per core. Reducing cores to 1 Rank 0 starting computing on 1 cores (requested 10 cores) Rank 0 computing serially ... Rank 0 - computed chunk in 0.0 msec or 0.0 msec per pixel. Average: 0.0 msec per pixel. Rank: 0 - now holding onto raw data + results has 21.05 GB free memory Rank 0 - wrote its 6 pixel chunk in 0.0 msec Rank 0 - 80% complete. Time remaining: 0.0 msec Rank 0 will read positions: [12 13 14] Rank 0 will read 336.0 bytes of the SOURCE dataset. Rank: 0 available memory: 21.05 GB. 10 workers on this socket will in total read ~ 3.28 kB. Rank 0 at Process class' default _unit_computation() that will call parallel_compute() Number of CPU free cores set to: 2 given that the CPU has 12 logical cores. 10 cores requested. computational jobs per core = 1. For short computations, each core must have at least 20 jobs to warrant parallel computation. Computations are not lengthy. Not enough jobs per core. Reducing cores to 1 Rank 0 starting computing on 1 cores (requested 10 cores) Rank 0 computing serially ... Rank 0 - computed chunk in 0.0 msec or 0.0 msec per pixel. Average: 0.0 msec per pixel. Rank: 0 - now holding onto raw data + results has 21.05 GB free memory Rank 0 - wrote its 3 pixel chunk in 0.0 msec Rank 0 - 100% complete. Time remaining: 0.0 msec Rank 0 - Finished reading all data! Rank 0 - Finished computing all jobs! Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Note: Mean_Val has already been performed PARTIALLY with the same parameters. compute() will resuming computation in the last group below. To choose a different group call use_patial_computation()Set override to True to force fresh computation or resume from a data group besides the last in the list. [, ] Resuming computation in group: /Raw_Measurement/source_main-Mean_Val_001 Resuming computation. 46% completed already This class (likely) supports interruption and resuming of computations! If you are operating in a python console, press Ctrl+C or Cmd+C to abort If you are in a Jupyter notebook, click on "Kernel">>"Interrupt" If you are operating on a cluster and your job gets killed, re-run the job to resume ok test_compute (tests.processing.test_process.TestProcReturnCompletedNotPartial.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestProcWLegacyResultsComplete.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestProcWLegacyResultsPartial.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestProcWoStatus.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestProcessWExistingResultsDiffFile.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestUsePartialComputationIllegal.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestUsePartialComputationLegit.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_compute (tests.processing.test_process.TestWriteResultsToNewH5File.test_compute) ... /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1072: UserWarning: In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying warn('In the future write_ind_val_dsets will default to requiring dimensions to be arranged from slowest to fastest varying') /build/reproducible-path/pyusid-0.0.12/.pybuild/cpython3_3.13_pyusid/build/pyUSID/io/hdf_utils/simple.py:1129: UserWarning: pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer createsregion references for each dimension. Please use pyUSID.io.reg_ref.write_region_references to manually create region references warn('pyUSID.io.hdf_utils.simple.write_ind_val_dsets no longer creates' ok test_tfunc (tests.processing.test_process.TestWriteResultsToNewH5File.test_tfunc) ... ok ---------------------------------------------------------------------- Ran 357 tests in 9.756s OK Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Note: Mean_Val has already been performed with the same parameters before. These results will be returned by compute() by default. Set override to True to force fresh computation [] Note: Mean_Val has already been performed PARTIALLY with the same parameters. compute() will resuming computation in the last group below. To choose a different group call use_patial_computation()Set override to True to force fresh computation or resume from a data group besides the last in the list. [] Returned previously computed results at /Raw_Measurement/source_main-Mean_Val_000 Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Note: Mean_Val has already been performed with the same parameters before. These results will be returned by compute() by default. Set override to True to force fresh computation [] Returned previously computed results at /Raw_Measurement/source_main-Mean_Val_000 Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Note: Mean_Val has already been performed PARTIALLY with the same parameters. compute() will resuming computation in the last group below. To choose a different group call use_patial_computation()Set override to True to force fresh computation or resume from a data group besides the last in the list. [] Resuming computation in group: /Raw_Measurement/source_main-Mean_Val_000 Resuming computation. 46% completed already This class (likely) supports interruption and resuming of computations! If you are operating in a python console, press Ctrl+C or Cmd+C to abort If you are in a Jupyter notebook, click on "Kernel">>"Interrupt" If you are operating on a cluster and your job gets killed, re-run the job to resume Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Group: had neither the status HDF5 dataset or the legacy attribute: "last_pixel". This class (likely) supports interruption and resuming of computations! If you are operating in a python console, press Ctrl+C or Cmd+C to abort If you are in a Jupyter notebook, click on "Kernel">>"Interrupt" If you are operating on a cluster and your job gets killed, re-run the job to resume Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Note: Mean_Val has already been performed PARTIALLY with the same parameters. compute() will resuming computation in the last group below. To choose a different group call use_patial_computation()Set override to True to force fresh computation or resume from a data group besides the last in the list. [, ] Resuming computation in group: /source_main-Mean_Val_001 Resuming computation. 46% completed already This class (likely) supports interruption and resuming of computations! If you are operating in a python console, press Ctrl+C or Cmd+C to abort If you are in a Jupyter notebook, click on "Kernel">>"Interrupt" If you are operating on a cluster and your job gets killed, re-run the job to resume Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Note: Mean_Val has already been performed PARTIALLY with the same parameters. compute() will resuming computation in the last group below. To choose a different group call use_patial_computation()Set override to True to force fresh computation or resume from a data group besides the last in the list. [, ] Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file Note: Mean_Val has already been performed PARTIALLY with the same parameters. compute() will resuming computation in the last group below. To choose a different group call use_patial_computation()Set override to True to force fresh computation or resume from a data group besides the last in the list. [, ] Resuming computation. 73% completed already This class (likely) supports interruption and resuming of computations! If you are operating in a python console, press Ctrl+C or Cmd+C to abort If you are in a Jupyter notebook, click on "Kernel">>"Interrupt" If you are operating on a cluster and your job gets killed, re-run the job to resume Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file This class does NOT support interruption and resuming of computations. In order to enable this feature, simply implement the _get_existing_datasets() function Rank 0 - 100% complete. Time remaining: 0.0 msec Finished processing the entire dataset! Consider calling test() to check results before calling compute() which computes on the entire dataset and writes results to the HDF5 file create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-pyusid/ -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-pyusid' in '../python3-pyusid_0.0.12-3_all.deb'. dpkg-genbuildinfo --build=binary -O../pyusid_0.0.12-3_arm64.buildinfo dpkg-genchanges --build=binary -O../pyusid_0.0.12-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from pyusid-0.0.12/debian/source/options: --extend-diff-ignore=^[^/]+.(egg-info|dist-info)/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3532143 and its subdirectories I: Current time: Thu Sep 11 01:55:36 -12 2025 I: pbuilder-time-stamp: 1757598936 Thu Sep 11 13:55:37 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Thu Sep 11 13:55:37 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Thu Sep 11 13:58:31 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Thu Sep 11 13:58:32 UTC 2025 I: pyusid_0.0.12-3_arm64.changes: Format: 1.8 Date: Fri, 14 Mar 2025 15:22:14 +0100 Source: pyusid Binary: python3-pyusid Architecture: all Version: 0.0.12-3 Distribution: unstable Urgency: medium Maintainer: Debian PaN Maintainers Changed-By: Roland Mas Description: python3-pyusid - Universal Spectroscopic and Imaging Data (USID) for Python Closes: 1095092 Changes: pyusid (0.0.12-3) unstable; urgency=medium . * Bug fix: "autopkgtests fail with numpy 2.x", thanks to Andrey Rakhmatullin (Closes: #1095092). Checksums-Sha1: 6eb88aa79ef3a0e21a54ecddfd743405f328a27e 54188 python3-pyusid_0.0.12-3_all.deb 34b024f6b4ac31a15486edc3068bb384e0263fee 11889 pyusid_0.0.12-3_arm64.buildinfo Checksums-Sha256: 174c6285221b2cb997bc37a72333d50469b951db7804931e2349c15aabc30dc7 54188 python3-pyusid_0.0.12-3_all.deb 279af847c63d49a285ae816cee912319321c2a7bdb198cb1e9450b5eb6b248f0 11889 pyusid_0.0.12-3_arm64.buildinfo Files: d2b5daf2a016a9263ab4d9762c8575e3 54188 python optional python3-pyusid_0.0.12-3_all.deb 21d9b31dcfa44f6e77daf10d57afa12b 11889 python optional pyusid_0.0.12-3_arm64.buildinfo Thu Sep 11 13:58:32 UTC 2025 I: diffoscope 306 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_7-96156.service; invocation ID: 873de58231a44945b2832918f5be0c1e # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.Ske6zFxO/pyusid_0.0.12-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.Ske6zFxO/pyusid_0.0.12-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.Ske6zFxO/pyusid_0.0.12-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.Ske6zFxO/b1/pyusid_0.0.12-3_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.Ske6zFxO/b2/pyusid_0.0.12-3_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 218ms CPU time consumed: 183ms Memory peak: 17.3M (swap: 0B) Thu Sep 11 13:58:33 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Thu Sep 11 13:58:33 UTC 2025 I: pyusid from forky built successfully and reproducibly on arm64. Thu Sep 11 13:58:33 UTC 2025 I: Removing signed pyusid_0.0.12-3_arm64.buildinfo.asc files: removed './b1/pyusid_0.0.12-3_arm64.buildinfo.asc' removed './b2/pyusid_0.0.12-3_arm64.buildinfo.asc'