Sun Feb 23 06:53:04 UTC 2025 I: starting to build atropos/trixie/amd64 on jenkins on '2025-02-23 06:52'
Sun Feb 23 06:53:04 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_5/31818/console.log
Sun Feb 23 06:53:04 UTC 2025 I: Downloading source for trixie/atropos=1.1.32+dfsg-2
--2025-02-23 06:53:04-- http://deb.debian.org/debian/pool/main/a/atropos/atropos_1.1.32%2bdfsg-2.dsc
Connecting to 46.16.76.132:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 2234 (2.2K) [text/prs.lines.tag]
Saving to: ‘atropos_1.1.32+dfsg-2.dsc’
0K .. 100% 270M=0s
2025-02-23 06:53:04 (270 MB/s) - ‘atropos_1.1.32+dfsg-2.dsc’ saved [2234/2234]
Sun Feb 23 06:53:04 UTC 2025 I: atropos_1.1.32+dfsg-2.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: atropos
Binary: atropos
Architecture: any
Version: 1.1.32+dfsg-2
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Homepage: https://github.com/jdidion/atropos
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/atropos
Vcs-Git: https://salsa.debian.org/med-team/atropos.git
Testsuite: autopkgtest
Testsuite-Triggers: python3-all, python3-pytest
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, cython3, python3-all-dev, python3-setuptools, python3-setuptools-scm, python3-wheel, python3-loguru, python3-xphyle, python3-pytest <!nocheck>, python3-jinja2 <!nocheck>, python3-pysam <!nocheck>
Package-List:
atropos deb science optional arch=any
Checksums-Sha1:
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Files:
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cd7c6edbbe1d3eee2bc386c019e378a7 6800 atropos_1.1.32+dfsg-2.debian.tar.xz
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Sun Feb 23 06:53:04 UTC 2025 I: Checking whether the package is not for us
Sun Feb 23 06:53:04 UTC 2025 I: Starting 1st build on remote node ionos11-amd64.debian.net.
Sun Feb 23 06:53:04 UTC 2025 I: Preparing to do remote build '1' on ionos11-amd64.debian.net.
Sun Feb 23 06:57:30 UTC 2025 I: Deleting $TMPDIR on ionos11-amd64.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Sat Feb 22 18:53:06 -12 2025
I: pbuilder-time-stamp: 1740293586
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [atropos_1.1.32+dfsg-2.dsc]
I: copying [./atropos_1.1.32+dfsg.orig.tar.xz]
I: copying [./atropos_1.1.32+dfsg-2.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./atropos_1.1.32+dfsg-2.dsc: unsupported subcommand
dpkg-source: info: extracting atropos in atropos-1.1.32+dfsg
dpkg-source: info: unpacking atropos_1.1.32+dfsg.orig.tar.xz
dpkg-source: info: unpacking atropos_1.1.32+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying no_install_depends_cython.patch
dpkg-source: info: applying cy3
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/1044162/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='amd64'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 '
DISTRIBUTION='trixie'
HOME='/root'
HOST_ARCH='amd64'
IFS='
'
INVOCATION_ID='4e2402a240194a94bd6d078c5fceebc9'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='1044162'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.jt3nsgDx/pbuilderrc_WWYm --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.jt3nsgDx/b1 --logfile b1/build.log atropos_1.1.32+dfsg-2.dsc'
SUDO_GID='111'
SUDO_UID='106'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://46.16.76.132:3128'
I: uname -a
Linux ionos11-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/1044162/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-sequence-python3, cython3, python3-all-dev, python3-setuptools, python3-setuptools-scm, python3-wheel, python3-loguru, python3-xphyle, python3-pytest, python3-jinja2, python3-pysam
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19805 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however:
Package dh-sequence-python3 is not installed.
pbuilder-satisfydepends-dummy depends on cython3; however:
Package cython3 is not installed.
pbuilder-satisfydepends-dummy depends on python3-all-dev; however:
Package python3-all-dev is not installed.
pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
Package python3-setuptools is not installed.
pbuilder-satisfydepends-dummy depends on python3-setuptools-scm; however:
Package python3-setuptools-scm is not installed.
pbuilder-satisfydepends-dummy depends on python3-wheel; however:
Package python3-wheel is not installed.
pbuilder-satisfydepends-dummy depends on python3-loguru; however:
Package python3-loguru is not installed.
pbuilder-satisfydepends-dummy depends on python3-xphyle; however:
Package python3-xphyle is not installed.
pbuilder-satisfydepends-dummy depends on python3-pytest; however:
Package python3-pytest is not installed.
pbuilder-satisfydepends-dummy depends on python3-jinja2; however:
Package python3-jinja2 is not installed.
pbuilder-satisfydepends-dummy depends on python3-pysam; however:
Package python3-pysam is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libcom-err2{a} libcurl3t64-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libhts3t64{a} libhtscodecs2{a} libicu72{a} libidn2-0{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnsl2{a} libp11-kit0{a} libpipeline1{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-all-dev{a} python3-autocommand{a} python3-colorama{a} python3-dev{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-loguru{a} python3-markupsafe{a} python3-minimal{a} python3-more-itertools{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pokrok{a} python3-pysam{a} python3-pytest{a} python3-setuptools{a} python3-setuptools-scm{a} python3-typeguard{a} python3-typing-extensions{a} python3-wheel{a} python3-xphyle{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a}
The following packages are RECOMMENDED but will NOT be installed:
ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-babel python3-pygments wget
0 packages upgraded, 118 newly installed, 0 to remove and 0 not upgraded.
Need to get 64.5 MB of archives. After unpacking 287 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian trixie/main amd64 libpython3.13-minimal amd64 3.13.2-1 [859 kB]
Get: 2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB]
Get: 3 http://deb.debian.org/debian trixie/main amd64 python3.13-minimal amd64 3.13.2-1 [2205 kB]
Get: 4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.13.1-2 [27.0 kB]
Get: 5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB]
Get: 6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB]
Get: 7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2025a-2 [259 kB]
Get: 8 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB]
Get: 9 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-6 [69.4 kB]
Get: 10 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get: 11 http://deb.debian.org/debian trixie/main amd64 libpython3.13-stdlib amd64 3.13.2-1 [1979 kB]
Get: 12 http://deb.debian.org/debian trixie/main amd64 python3.13 amd64 3.13.2-1 [745 kB]
Get: 13 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.13.1-2 [9952 B]
Get: 14 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.13.1-2 [28.0 kB]
Get: 15 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.9-1 [817 kB]
Get: 16 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.9-1 [2163 kB]
Get: 17 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get: 18 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB]
Get: 19 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB]
Get: 20 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB]
Get: 21 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.23.1-1 [243 kB]
Get: 22 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB]
Get: 23 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-7 [1185 kB]
Get: 24 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.4-3 [92.1 kB]
Get: 25 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB]
Get: 26 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB]
Get: 27 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-5 [294 kB]
Get: 28 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB]
Get: 29 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 30 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.17-3 [862 kB]
Get: 31 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.23.1-1 [770 kB]
Get: 32 http://deb.debian.org/debian trixie/main amd64 cython3 amd64 3.0.11+dfsg-2 [3159 kB]
Get: 33 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 34 http://deb.debian.org/debian trixie/main amd64 libtool all 2.5.4-3 [539 kB]
Get: 35 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 36 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 37 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 38 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 39 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB]
Get: 40 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get: 41 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-1 [476 kB]
Get: 42 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-6 [9421 kB]
Get: 43 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB]
Get: 44 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.23.1-1 [1680 kB]
Get: 45 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 46 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 47 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.24.1 [920 kB]
Get: 48 http://deb.debian.org/debian trixie/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 49 http://deb.debian.org/debian trixie/main amd64 python3-more-itertools all 10.6.0-1 [65.3 kB]
Get: 50 http://deb.debian.org/debian trixie/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 51 http://deb.debian.org/debian trixie/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB]
Get: 52 http://deb.debian.org/debian trixie/main amd64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 53 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get: 54 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 55 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 75.6.0-1 [222 kB]
Get: 56 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 57 http://deb.debian.org/debian trixie/main amd64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 58 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 75.6.0-1 [720 kB]
Get: 59 http://deb.debian.org/debian trixie/main amd64 dh-python all 6.20250108 [113 kB]
Get: 60 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB]
Get: 61 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB]
Get: 62 http://deb.debian.org/debian trixie/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB]
Get: 63 http://deb.debian.org/debian trixie/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB]
Get: 64 http://deb.debian.org/debian trixie/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB]
Get: 65 http://deb.debian.org/debian trixie/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB]
Get: 66 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-4 [32.8 kB]
Get: 67 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-4 [80.9 kB]
Get: 68 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B]
Get: 69 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-4 [326 kB]
Get: 70 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-4 [138 kB]
Get: 71 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8+b1 [19.9 kB]
Get: 72 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8+b1 [57.6 kB]
Get: 73 http://deb.debian.org/debian trixie/main amd64 libldap2 amd64 2.6.9+dfsg-1 [192 kB]
Get: 74 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB]
Get: 75 http://deb.debian.org/debian trixie/main amd64 libnghttp3-9 amd64 1.6.0-2 [64.8 kB]
Get: 76 http://deb.debian.org/debian trixie/main amd64 libngtcp2-16 amd64 1.9.1-1 [119 kB]
Get: 77 http://deb.debian.org/debian trixie/main amd64 libngtcp2-crypto-gnutls8 amd64 1.9.1-1 [18.5 kB]
Get: 78 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB]
Get: 79 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB]
Get: 80 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB]
Get: 81 http://deb.debian.org/debian trixie/main amd64 libcurl3t64-gnutls amd64 8.12.1-2 [365 kB]
Get: 82 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB]
Get: 83 http://deb.debian.org/debian trixie/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB]
Get: 84 http://deb.debian.org/debian trixie/main amd64 libhtscodecs2 amd64 1.6.1-2 [95.8 kB]
Get: 85 http://deb.debian.org/debian trixie/main amd64 libhts3t64 amd64 1.21+ds-1 [463 kB]
Get: 86 http://deb.debian.org/debian trixie/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 87 http://deb.debian.org/debian trixie/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 88 http://deb.debian.org/debian trixie/main amd64 libjs-sphinxdoc all 8.1.3-4 [30.4 kB]
Get: 89 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get: 90 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB]
Get: 91 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB]
Get: 92 http://deb.debian.org/debian trixie/main amd64 libpython3.13 amd64 3.13.2-1 [2151 kB]
Get: 93 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB]
Get: 94 http://deb.debian.org/debian trixie/main amd64 libpython3.13-dev amd64 3.13.2-1 [5005 kB]
Get: 95 http://deb.debian.org/debian trixie/main amd64 libpython3-dev amd64 3.13.1-2 [10.2 kB]
Get: 96 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.9-1 [1974 kB]
Get: 97 http://deb.debian.org/debian trixie/main amd64 libpython3.12t64 amd64 3.12.9-1 [2151 kB]
Get: 98 http://deb.debian.org/debian trixie/main amd64 libpython3.12-dev amd64 3.12.9-1 [5125 kB]
Get: 99 http://deb.debian.org/debian trixie/main amd64 libpython3-all-dev amd64 3.13.1-2 [1072 B]
Get: 100 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.9-1 [681 kB]
Get: 101 http://deb.debian.org/debian trixie/main amd64 python3-all amd64 3.13.1-2 [1056 B]
Get: 102 http://deb.debian.org/debian trixie/main amd64 python3.13-dev amd64 3.13.2-1 [507 kB]
Get: 103 http://deb.debian.org/debian trixie/main amd64 python3-dev amd64 3.13.1-2 [26.1 kB]
Get: 104 http://deb.debian.org/debian trixie/main amd64 python3.12-dev amd64 3.12.9-1 [505 kB]
Get: 105 http://deb.debian.org/debian trixie/main amd64 python3-all-dev amd64 3.13.1-2 [1076 B]
Get: 106 http://deb.debian.org/debian trixie/main amd64 python3-colorama all 0.4.6-4 [36.2 kB]
Get: 107 http://deb.debian.org/debian trixie/main amd64 python3-iniconfig all 1.1.1-2 [6396 B]
Get: 108 http://deb.debian.org/debian trixie/main amd64 python3-markupsafe amd64 2.1.5-1+b2 [13.9 kB]
Get: 109 http://deb.debian.org/debian trixie/main amd64 python3-jinja2 all 3.1.5-2 [107 kB]
Get: 110 http://deb.debian.org/debian trixie/main amd64 python3-loguru all 0.7.3-1 [59.0 kB]
Get: 111 http://deb.debian.org/debian trixie/main amd64 python3-packaging all 24.2-1 [55.3 kB]
Get: 112 http://deb.debian.org/debian trixie/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB]
Get: 113 http://deb.debian.org/debian trixie/main amd64 python3-pokrok all 0.2.0-5 [11.3 kB]
Get: 114 http://deb.debian.org/debian trixie/main amd64 python3-pysam amd64 0.23.0+ds-1 [4527 kB]
Get: 115 http://deb.debian.org/debian trixie/main amd64 python3-pytest all 8.3.4-1 [250 kB]
Get: 116 http://deb.debian.org/debian trixie/main amd64 python3-setuptools-scm all 8.1.0-1 [40.5 kB]
Get: 117 http://deb.debian.org/debian trixie/main amd64 python3-wheel all 0.45.1-1 [56.7 kB]
Get: 118 http://deb.debian.org/debian trixie/main amd64 python3-xphyle all 4.4.4-5 [52.2 kB]
Fetched 64.5 MB in 1s (50.3 MB/s)
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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
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Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
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Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
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Current default time zone: 'Etc/UTC'
Local time is now: Sun Feb 23 06:54:00 UTC 2025.
Universal Time is now: Sun Feb 23 06:54:00 UTC 2025.
Run 'dpkg-reconfigure tzdata' if you wish to change it.
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update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode
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Not building database; man-db/auto-update is not 'true'.
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Processing triggers for libc-bin (2.40-7) ...
Reading package lists...
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-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/atropos-1.1.32+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../atropos_1.1.32+dfsg-2_source.changes
dpkg-buildpackage: info: source package atropos
dpkg-buildpackage: info: source version 1.1.32+dfsg-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
debian/rules clean
dh clean --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/atropos-1.1.32+dfsg'
dh_auto_clean
I: pybuild base:311: python3.12 setup.py clean
/build/reproducible-path/atropos-1.1.32+dfsg/versioneer.py:494: SyntaxWarning: invalid escape sequence '\s'
] = '''
/usr/lib/python3/dist-packages/setuptools/dist.py:488: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'description-file' will not be supported in future
versions. Please use the underscore name 'description_file' instead.
By 2025-Mar-03, you need to update your project and remove deprecated calls
or your builds will no longer be supported.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
running clean
removing '/build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-3.12' does not exist -- can't clean it
I: pybuild base:311: python3.13 setup.py clean
/build/reproducible-path/atropos-1.1.32+dfsg/versioneer.py:494: SyntaxWarning: invalid escape sequence '\s'
] = '''
/usr/lib/python3/dist-packages/setuptools/dist.py:488: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'description-file' will not be supported in future
versions. Please use the underscore name 'description_file' instead.
By 2025-Mar-03, you need to update your project and remove deprecated calls
or your builds will no longer be supported.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
running clean
removing '/build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
rm -rf .pytest_cache
rm -rf atropos.egg-info
rm -f atropos/align/_align.c atropos/commands/trim/_qualtrim.c atropos/io/_seqio.c
make[1]: Leaving directory '/build/reproducible-path/atropos-1.1.32+dfsg'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.12 setup.py config
/build/reproducible-path/atropos-1.1.32+dfsg/versioneer.py:494: SyntaxWarning: invalid escape sequence '\s'
] = '''
/usr/lib/python3/dist-packages/setuptools/dist.py:488: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'description-file' will not be supported in future
versions. Please use the underscore name 'description_file' instead.
By 2025-Mar-03, you need to update your project and remove deprecated calls
or your builds will no longer be supported.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
running config
I: pybuild base:311: python3.13 setup.py config
/build/reproducible-path/atropos-1.1.32+dfsg/versioneer.py:494: SyntaxWarning: invalid escape sequence '\s'
] = '''
/usr/lib/python3/dist-packages/setuptools/dist.py:488: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'description-file' will not be supported in future
versions. Please use the underscore name 'description_file' instead.
By 2025-Mar-03, you need to update your project and remove deprecated calls
or your builds will no longer be supported.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
running config
dh_auto_build -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.12 setup.py build
/usr/lib/python3/dist-packages/setuptools/dist.py:488: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'description-file' will not be supported in future
versions. Please use the underscore name 'description_file' instead.
By 2025-Mar-03, you need to update your project and remove deprecated calls
or your builds will no longer be supported.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
running build
running build_py
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_commands.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_paired.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_qualtrim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_atropos.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_seqio.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_xopen.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_filters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_trim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_modifiers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_colorspace.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/utils.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_align.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
copying tests/test_adapters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos
copying atropos/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos
copying atropos/_version.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/stats.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/base.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/legacy_report.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/align
copying atropos/align/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/align
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/adapters
copying atropos/adapters/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/adapters
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io
copying atropos/io/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io
copying atropos/io/seqio.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io
copying atropos/io/compression.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io
copying atropos/io/progress.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/util
copying atropos/util/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/util
copying atropos/util/colorspace.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/util
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/writers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/modifiers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/filters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/qualtrim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/error
copying atropos/commands/error/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/error
copying atropos/commands/error/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/error
copying atropos/commands/error/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/error
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/qc
copying atropos/commands/qc/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/qc
copying atropos/commands/qc/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/qc
copying atropos/commands/qc/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/qc
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/detect
copying atropos/commands/detect/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/detect
copying atropos/commands/detect/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/detect
copying atropos/commands/detect/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/detect
copying atropos/adapters/sequencing_adapters.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/adapters
UPDATING /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/_version.py
set /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/_version.py to '1.1.32'
running build_ext
/build/reproducible-path/atropos-1.1.32+dfsg/setup.py:84: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
Compiling atropos/align/_align.pyx because it changed.
Compiling atropos/commands/trim/_qualtrim.pyx because it changed.
Compiling atropos/io/_seqio.pyx because it changed.
[1/3] Cythonizing atropos/align/_align.pyx
[2/3] Cythonizing atropos/commands/trim/_qualtrim.pyx
[3/3] Cythonizing atropos/io/_seqio.pyx
building 'atropos.align._align' extension
creating build/temp.linux-x86_64-cpython-312/atropos/align
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c atropos/align/_align.c -o build/temp.linux-x86_64-cpython-312/atropos/align/_align.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-312/atropos/align/_align.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/align/_align.cpython-312-x86_64-linux-gnu.so
building 'atropos.commands.trim._qualtrim' extension
creating build/temp.linux-x86_64-cpython-312/atropos/commands/trim
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c atropos/commands/trim/_qualtrim.c -o build/temp.linux-x86_64-cpython-312/atropos/commands/trim/_qualtrim.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-312/atropos/commands/trim/_qualtrim.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/_qualtrim.cpython-312-x86_64-linux-gnu.so
building 'atropos.io._seqio' extension
creating build/temp.linux-x86_64-cpython-312/atropos/io
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c atropos/io/_seqio.c -o build/temp.linux-x86_64-cpython-312/atropos/io/_seqio.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-312/atropos/io/_seqio.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io/_seqio.cpython-312-x86_64-linux-gnu.so
running build_scripts
creating build/scripts-3.12
copying and adjusting bin/atropos -> build/scripts-3.12
changing mode of build/scripts-3.12/atropos from 644 to 755
I: pybuild base:311: /usr/bin/python3 setup.py build
/usr/lib/python3/dist-packages/setuptools/dist.py:488: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'description-file' will not be supported in future
versions. Please use the underscore name 'description_file' instead.
By 2025-Mar-03, you need to update your project and remove deprecated calls
or your builds will no longer be supported.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
running build
running build_py
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_commands.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_paired.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_qualtrim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_atropos.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_seqio.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_xopen.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_filters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_trim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_modifiers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_colorspace.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/utils.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_align.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
copying tests/test_adapters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos
copying atropos/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos
copying atropos/_version.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/stats.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/base.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/legacy_report.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/align
copying atropos/align/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/align
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/adapters
copying atropos/adapters/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/adapters
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io
copying atropos/io/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io
copying atropos/io/seqio.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io
copying atropos/io/compression.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io
copying atropos/io/progress.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/util
copying atropos/util/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/util
copying atropos/util/colorspace.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/util
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/writers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/modifiers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/filters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/qualtrim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/error
copying atropos/commands/error/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/error
copying atropos/commands/error/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/error
copying atropos/commands/error/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/error
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/qc
copying atropos/commands/qc/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/qc
copying atropos/commands/qc/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/qc
copying atropos/commands/qc/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/qc
creating /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/detect
copying atropos/commands/detect/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/detect
copying atropos/commands/detect/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/detect
copying atropos/commands/detect/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/detect
copying atropos/adapters/sequencing_adapters.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/adapters
UPDATING /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/_version.py
set /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/_version.py to '1.1.32'
running build_ext
/build/reproducible-path/atropos-1.1.32+dfsg/setup.py:84: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
building 'atropos.align._align' extension
creating build/temp.linux-x86_64-cpython-313/atropos/align
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c atropos/align/_align.c -o build/temp.linux-x86_64-cpython-313/atropos/align/_align.o
atropos/align/_align.c:2466:9: warning: ‘Py_UNICODE’ is deprecated [-Wdeprecated-declarations]
2466 | Py_UNICODE *as_pyunicodes;
| ^~~~~~~~~~
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/atropos/align/_align.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/align/_align.cpython-313-x86_64-linux-gnu.so
building 'atropos.commands.trim._qualtrim' extension
creating build/temp.linux-x86_64-cpython-313/atropos/commands/trim
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c atropos/commands/trim/_qualtrim.c -o build/temp.linux-x86_64-cpython-313/atropos/commands/trim/_qualtrim.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/atropos/commands/trim/_qualtrim.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/_qualtrim.cpython-313-x86_64-linux-gnu.so
building 'atropos.io._seqio' extension
creating build/temp.linux-x86_64-cpython-313/atropos/io
x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c atropos/io/_seqio.c -o build/temp.linux-x86_64-cpython-313/atropos/io/_seqio.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/atropos-1.1.32+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/atropos/io/_seqio.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io/_seqio.cpython-313-x86_64-linux-gnu.so
running build_scripts
creating build/scripts-3.13
copying and adjusting bin/atropos -> build/scripts-3.13
changing mode of build/scripts-3.13/atropos from 644 to 755
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/atropos-1.1.32+dfsg'
\
dh_auto_test -- --before-test="ln -s /build/reproducible-path/atropos-1.1.32+dfsg/tests/cut {build_dir}/tests && ln -s /build/reproducible-path/atropos-1.1.32+dfsg/tests/data {build_dir}/tests"
I: pybuild pybuild:308: ln -s /build/reproducible-path/atropos-1.1.32+dfsg/tests/cut /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests && ln -s /build/reproducible-path/atropos-1.1.32+dfsg/tests/data /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests
I: pybuild base:311: cd /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build; python3.12 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.12.9, pytest-8.3.4, pluggy-1.5.0
rootdir: /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build
configfile: pytest.ini
plugins: typeguard-4.4.1
collected 222 items
tests/test_adapters.py ........ [ 3%]
tests/test_align.py ................ [ 10%]
tests/test_atropos.py .................................................. [ 33%]
............................s [ 46%]
tests/test_colorspace.py ................. [ 54%]
tests/test_commands.py . [ 54%]
tests/test_filters.py .. [ 55%]
tests/test_modifiers.py .................... [ 64%]
tests/test_multicore.py ..... [ 66%]
tests/test_paired.py ................................ [ 81%]
tests/test_qualtrim.py . [ 81%]
tests/test_seqio.py ................................... [ 97%]
tests/test_trim.py .. [ 98%]
tests/test_xopen.py .... [100%]
=============================== warnings summary ===============================
tests/test_paired.py:638
/build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_paired.py:638: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
@pytest.mark.timeout(10)
tests/test_paired.py::test_no_writer_process
tests/test_paired.py::test_no_writer_process
tests/test_paired.py::test_summary
tests/test_paired.py::test_summary
/usr/lib/python3.12/multiprocessing/popen_fork.py:66: DeprecationWarning: This process (pid=1079147) is multi-threaded, use of fork() may lead to deadlocks in the child.
self.pid = os.fork()
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================= 221 passed, 1 skipped, 5 warnings in 48.60s ==================
I: pybuild pybuild:308: ln -s /build/reproducible-path/atropos-1.1.32+dfsg/tests/cut /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests && ln -s /build/reproducible-path/atropos-1.1.32+dfsg/tests/data /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests
I: pybuild base:311: cd /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build; python3.13 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.13.2, pytest-8.3.4, pluggy-1.5.0
rootdir: /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build
configfile: pytest.ini
plugins: typeguard-4.4.1
collected 222 items
tests/test_adapters.py ........ [ 3%]
tests/test_align.py ................ [ 10%]
tests/test_atropos.py .................................................. [ 33%]
............................s [ 46%]
tests/test_colorspace.py ................. [ 54%]
tests/test_commands.py . [ 54%]
tests/test_filters.py .. [ 55%]
tests/test_modifiers.py .................... [ 64%]
tests/test_multicore.py ..... [ 66%]
tests/test_paired.py ................................ [ 81%]
tests/test_qualtrim.py . [ 81%]
tests/test_seqio.py ................................... [ 97%]
tests/test_trim.py .. [ 98%]
tests/test_xopen.py .... [100%]
=============================== warnings summary ===============================
tests/test_paired.py:638
/build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_paired.py:638: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
@pytest.mark.timeout(10)
tests/test_paired.py::test_no_writer_process
tests/test_paired.py::test_no_writer_process
tests/test_paired.py::test_summary
tests/test_paired.py::test_summary
/usr/lib/python3.13/multiprocessing/popen_fork.py:67: DeprecationWarning: This process (pid=1089612) is multi-threaded, use of fork() may lead to deadlocks in the child.
self.pid = os.fork()
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================= 221 passed, 1 skipped, 5 warnings in 44.56s ==================
make[1]: Leaving directory '/build/reproducible-path/atropos-1.1.32+dfsg'
create-stamp debian/debhelper-build-stamp
dh_testroot -O--buildsystem=pybuild
dh_prep -O--buildsystem=pybuild
dh_auto_install --destdir=debian/atropos/ -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.12 setup.py install --root /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos
/usr/lib/python3/dist-packages/setuptools/dist.py:488: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'description-file' will not be supported in future
versions. Please use the underscore name 'description_file' instead.
By 2025-Mar-03, you need to update your project and remove deprecated calls
or your builds will no longer be supported.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
UPDATING /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/_version.py
set /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/_version.py to '1.1.32'
running build_ext
/build/reproducible-path/atropos-1.1.32+dfsg/setup.py:84: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
running build_scripts
running install_lib
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/.adapters -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/trimN5.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-too-short.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solid.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/discard.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_adapter.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solid5p-anchored.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/lowqual.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/examplefront.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/wildcardN.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth_insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/anchored_no_indels_wildcard.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/issue46.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-untrimmed.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-m27.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/empty.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/454.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solid5p-anchored.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/wildcard_adapter_anywhere.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/wildcard_adapter.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_bis1_adapter.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth_adapter.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/linked.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/maxn0.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solid5p-anchored.notrim.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solid5p-anchored.notrim.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/example.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_adapter.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solidqual.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/minlen.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-m27.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/maxlen.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired.m14.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/twoadapters.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/twoadapters.unknown.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_bis2_adapter.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/anchored-back.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/illumina5.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/twoadapters.first.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/unconditional-both.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired.m14.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/interleaved.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/anywhere_repeat.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth_adapter.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/illumina.info.txt -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/small.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/small.trimmed.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_bis1_insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/rest.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/illumina64.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/sra.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/polya.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-separate.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/issue68.2.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/maxn0.2.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/lowercase.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/restfront.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/pairedq.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/maxn0.4.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-untrimmed.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/no_indels.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/suffix.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-onlyA.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-separate.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/small.untrimmed.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/empty.fastq.gz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solid5p.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/maxn2.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth_insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/minlen.noprimer.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/s_1_sequence.txt -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_bis2_insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/plus.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solid.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/anchored.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/small_mincut3.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/overlapa.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/no-trim.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/small.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/twoadapters.second.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solid-no-zerocap.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solid5p.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/highq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/unconditional-back.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/pairedq.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/trimN3.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/issue68.1.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-trimmed.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/back_repeat.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/illumina5.info.txt -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_bis2_adapter.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/anchored_no_indels.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-too-short.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/discard-untrimmed.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/SRR2040662_trimmed.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/pairedu.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/dos.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/pairedu.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/stripped.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solidmaq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/small_mincut2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/wildcard.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_bis1_adapter.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/back_repeat.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/overlapb.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/lowq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/nextseq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_bis1_insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/unconditional-front.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/small_mincut1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-onlyA.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/maxn1.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/solidbfast.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired_bis2_insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/paired-trimmed.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/cut/illumina.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_commands.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_paired.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_qualtrim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_atropos.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_seqio.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_xopen.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_filters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_trim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_adapters.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_seqio.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_trim.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_qualtrim.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_paired.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_multicore.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_modifiers.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_commands.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_xopen.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_align.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/utils.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_colorspace.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_filters.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/__pycache__/test_atropos.cpython-312-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/trimN5.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/solid.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/prefix-adapter.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/paired_bis_insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/big.2.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/E3M.qual -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/multiblock.fastq.gz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/lowqual.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/big.1.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/wildcardN.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/issue46.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/illumina.fastq.gz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/empty.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/454.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/wildcard_adapter.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/linked.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/example.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/small.fastq.gz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/suffix-adapter.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/simple.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/twoadapters.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/anchored-back.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/illumina5.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/simple.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/interleaved.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/anywhere_repeat.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/solid.csfasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/paired_bis_adapter.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/small.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/rest.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/illumina64.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/sra.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/polya.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/issue68.2.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/paired.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/E3M.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/no_indels.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/solid5p.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/restfront.txt -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/lengths.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/plus.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/solid.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/adapter.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/anchored.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/maxn.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/rest.txt -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/overlapa.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/paired_bis_insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/solid5p.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/highq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/trimN3.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/issue68.1.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/tooshort.noprimer.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/back_repeat.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/s_1_sequence.txt.gz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/small.fastq.xz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/paired.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/small.fastq.bz2 -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/anchored_no_indels.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/small.myownextension -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/solid.qual -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/dos.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/wildcard.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/back_repeat.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/overlapb.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/lowq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/nextseq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/tooshort.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/toolong.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/bad_bases.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/paired_bis_adapter.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/data/withplus.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_modifiers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_colorspace.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/utils.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_align.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/tests/test_adapters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/.pytest_cache/.gitignore -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/.pytest_cache/CACHEDIR.TAG -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache/v
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/.pytest_cache/v/cache/nodeids -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/.pytest_cache/v/cache/stepwise -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/.pytest_cache/README.md -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/stats.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/base.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/writers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/_qualtrim.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/reports.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/modifiers.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/qualtrim.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/writers.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/cli.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/filters.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/multicore.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/modifiers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/filters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/qualtrim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/trim/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/error/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/error/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/error/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/error/__pycache__/cli.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/error/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/qc/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/qc/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/qc/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/qc/__pycache__/cli.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/qc/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/detect/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/detect/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/detect/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/detect/__pycache__/cli.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/detect/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/reports.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/base.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/cli.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/stats.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/legacy_report.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/multicore.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/legacy_report.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/commands/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/align/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/align/_align.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/align/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align/__pycache__
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/adapters/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/adapters/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/adapters/sequencing_adapters.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/_version.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io/seqio.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io/compression.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io/progress.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io/_seqio.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io/__pycache__/seqio.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/io/__pycache__/compression.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/__pycache__
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/__pycache__/_version.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/__pycache__
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/util/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/util/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/util/__pycache__/colorspace.cpython-312.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.12/build/atropos/util/colorspace.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_commands.py to test_commands.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_paired.py to test_paired.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_qualtrim.py to test_qualtrim.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_atropos.py to test_atropos.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_seqio.py to test_seqio.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_xopen.py to test_xopen.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_multicore.py to test_multicore.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_filters.py to test_filters.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_trim.py to test_trim.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_modifiers.py to test_modifiers.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_colorspace.py to test_colorspace.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/utils.py to utils.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_align.py to test_align.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_adapters.py to test_adapters.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/stats.py to stats.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/multicore.py to multicore.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/cli.py to cli.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/base.py to base.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/writers.py to writers.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/multicore.py to multicore.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/cli.py to cli.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/modifiers.py to modifiers.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/filters.py to filters.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/qualtrim.py to qualtrim.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/reports.py to reports.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/cli.py to cli.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/reports.py to reports.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/cli.py to cli.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/reports.py to reports.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/cli.py to cli.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/reports.py to reports.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/legacy_report.py to legacy_report.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/reports.py to reports.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/_version.py to _version.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/seqio.py to seqio.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/compression.py to compression.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/progress.py to progress.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util/__init__.py to __init__.cpython-312.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util/colorspace.py to colorspace.cpython-312.pyc
running install_egg_info
running egg_info
creating atropos.egg-info
writing atropos.egg-info/PKG-INFO
writing dependency_links to atropos.egg-info/dependency_links.txt
writing requirements to atropos.egg-info/requires.txt
writing top-level names to atropos.egg-info/top_level.txt
writing manifest file 'atropos.egg-info/SOURCES.txt'
reading manifest file 'atropos.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'README.rst'
warning: no files found matching 'LICENSE.txt'
warning: no files found matching 'atropos/report/templates/*'
adding license file 'LICENSE'
writing manifest file 'atropos.egg-info/SOURCES.txt'
Copying atropos.egg-info to /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.12/dist-packages/atropos-1.1.32.egg-info
Skipping SOURCES.txt
running install_scripts
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/bin
copying build/scripts-3.12/atropos -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/bin
changing mode of /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/bin/atropos to 755
I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos
/usr/lib/python3/dist-packages/setuptools/dist.py:488: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!
********************************************************************************
Usage of dash-separated 'description-file' will not be supported in future
versions. Please use the underscore name 'description_file' instead.
By 2025-Mar-03, you need to update your project and remove deprecated calls
or your builds will no longer be supported.
See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
********************************************************************************
!!
opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
UPDATING /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/_version.py
set /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/_version.py to '1.1.32'
running build_ext
/build/reproducible-path/atropos-1.1.32+dfsg/setup.py:84: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
running build_scripts
running install_lib
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/.adapters -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/trimN5.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-too-short.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solid.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/discard.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_adapter.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solid5p-anchored.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/lowqual.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/examplefront.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/wildcardN.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth_insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/anchored_no_indels_wildcard.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/issue46.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-untrimmed.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-m27.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/empty.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/454.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solid5p-anchored.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/wildcard_adapter_anywhere.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/wildcard_adapter.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_bis1_adapter.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth_adapter.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/linked.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/maxn0.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solid5p-anchored.notrim.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solid5p-anchored.notrim.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/example.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_adapter.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solidqual.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/minlen.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-m27.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/maxlen.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired.m14.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/twoadapters.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/twoadapters.unknown.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_bis2_adapter.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/anchored-back.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/illumina5.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/twoadapters.first.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/unconditional-both.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired.m14.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/interleaved.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/anywhere_repeat.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth_adapter.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/illumina.info.txt -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/small.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/small.trimmed.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_bis1_insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/rest.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/illumina64.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/sra.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/polya.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-separate.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/issue68.2.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/maxn0.2.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/lowercase.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/restfront.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/pairedq.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/maxn0.4.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-untrimmed.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/no_indels.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/suffix.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-onlyA.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-separate.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/small.untrimmed.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/empty.fastq.gz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solid5p.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/maxn2.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth_insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/minlen.noprimer.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/s_1_sequence.txt -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_bis2_insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/plus.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solid.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/anchored.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/small_mincut3.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/overlapa.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/no-trim.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/small.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/twoadapters.second.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solid-no-zerocap.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solid5p.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/highq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/unconditional-back.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/pairedq.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/trimN3.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/issue68.1.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-trimmed.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/back_repeat.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/illumina5.info.txt -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_bis2_adapter.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/anchored_no_indels.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-too-short.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/discard-untrimmed.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/SRR2040662_trimmed.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/pairedu.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/dos.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/pairedu.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/stripped.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solidmaq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/small_mincut2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/wildcard.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_bis1_adapter.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/back_repeat.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/overlapb.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/lowq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/nextseq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_bis1_insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/unconditional-front.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/small_mincut1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-onlyA.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/maxn1.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/solidbfast.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired_bis2_insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/paired-trimmed.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/cut/illumina.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_commands.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_paired.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_qualtrim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_atropos.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_seqio.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_xopen.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_filters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_trim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_align.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_qualtrim.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_multicore.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_commands.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_paired.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_adapters.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_trim.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_xopen.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/utils.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_colorspace.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_seqio.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_modifiers.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_atropos.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/__pycache__/test_filters.cpython-313-pytest-8.3.4.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/trimN5.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/solid.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/prefix-adapter.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/paired_bis_insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/big.2.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/E3M.qual -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/multiblock.fastq.gz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/lowqual.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/big.1.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/wildcardN.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/issue46.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/illumina.fastq.gz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/empty.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/454.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/wildcard_adapter.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/linked.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/example.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/small.fastq.gz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/suffix-adapter.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/simple.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/twoadapters.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/anchored-back.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/illumina5.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/simple.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/interleaved.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/anywhere_repeat.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/solid.csfasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/paired_bis_adapter.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/small.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/rest.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/illumina64.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/sra.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/polya.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/issue68.2.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/paired.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/E3M.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/no_indels.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/solid5p.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/restfront.txt -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/lengths.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/plus.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/solid.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/adapter.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/anchored.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/maxn.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/rest.txt -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/overlapa.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/paired_bis_insert.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/solid5p.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/highq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/trimN3.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/issue68.1.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/tooshort.noprimer.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/back_repeat.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/s_1_sequence.txt.gz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/small.fastq.xz -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/paired.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/small.fastq.bz2 -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/anchored_no_indels.fasta -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/small.myownextension -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/solid.qual -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/dos.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/wildcard.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/back_repeat.1.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/overlapb.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/lowq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/nextseq.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/insert.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/tooshort.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/toolong.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/bad_bases.fq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/paired_bis_adapter.2.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/data/withplus.fastq -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_modifiers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_colorspace.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/utils.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_align.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/tests/test_adapters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/tests
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/.pytest_cache/.gitignore -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/.pytest_cache/CACHEDIR.TAG -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache/v
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/.pytest_cache/v/cache/nodeids -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/.pytest_cache/v/cache/stepwise -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/.pytest_cache/README.md -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/stats.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/base.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/writers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/multicore.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/_qualtrim.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/reports.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/qualtrim.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/multicore.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/cli.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/modifiers.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/filters.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/writers.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/modifiers.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/filters.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/qualtrim.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/trim/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/error/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/error/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/error/__pycache__/cli.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/error/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/error/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/qc/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/qc/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/qc/__pycache__/cli.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/qc/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/qc/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/detect/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/detect/cli.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/detect/__pycache__/cli.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/detect/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/detect/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
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copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/stats.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/multicore.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/cli.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/base.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/legacy_report.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/legacy_report.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/commands/reports.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/align/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align/__pycache__
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copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/align/_align.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/adapters/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/adapters/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/adapters/sequencing_adapters.fa -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/_version.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io/seqio.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io/compression.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io/progress.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io/_seqio.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io/__pycache__/seqio.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io/__pycache__/compression.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/io/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/__pycache__
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/__pycache__/_version.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/__pycache__
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/util/__init__.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util
creating /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/util/__pycache__/colorspace.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/util/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util/__pycache__
copying /build/reproducible-path/atropos-1.1.32+dfsg/.pybuild/cpython3_3.13/build/atropos/util/colorspace.py -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util
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byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect/__init__.py to __init__.cpython-313.pyc
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byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/reports.py to reports.cpython-313.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/_version.py to _version.cpython-313.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/seqio.py to seqio.cpython-313.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/compression.py to compression.cpython-313.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/progress.py to progress.cpython-313.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util/colorspace.py to colorspace.cpython-313.pyc
running install_egg_info
running egg_info
writing atropos.egg-info/PKG-INFO
writing dependency_links to atropos.egg-info/dependency_links.txt
writing requirements to atropos.egg-info/requires.txt
writing top-level names to atropos.egg-info/top_level.txt
reading manifest file 'atropos.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'README.rst'
warning: no files found matching 'LICENSE.txt'
warning: no files found matching 'atropos/report/templates/*'
adding license file 'LICENSE'
writing manifest file 'atropos.egg-info/SOURCES.txt'
Copying atropos.egg-info to /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/lib/python3.13/dist-packages/atropos-1.1.32.egg-info
Skipping SOURCES.txt
running install_scripts
copying build/scripts-3.13/atropos -> /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/bin
changing mode of /build/reproducible-path/atropos-1.1.32+dfsg/debian/atropos/usr/bin/atropos to 755
debian/rules override_dh_install
make[1]: Entering directory '/build/reproducible-path/atropos-1.1.32+dfsg'
dh_install
find debian -type d -name __pycache__ | xargs rm -rf
find debian -type d -name tests | xargs rm -rf
find debian -type f -name .adapters -delete
make[1]: Leaving directory '/build/reproducible-path/atropos-1.1.32+dfsg'
dh_installdocs -O--buildsystem=pybuild
dh_installchangelogs -O--buildsystem=pybuild
dh_installman -O--buildsystem=pybuild
dh_python3 -O--buildsystem=pybuild
dh_installsystemduser -O--buildsystem=pybuild
dh_perl -O--buildsystem=pybuild
dh_link -O--buildsystem=pybuild
dh_strip_nondeterminism -O--buildsystem=pybuild
dh_compress -O--buildsystem=pybuild
dh_fixperms -O--buildsystem=pybuild
dh_missing -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -O--buildsystem=pybuild
dh_gencontrol -O--buildsystem=pybuild
dh_md5sums -O--buildsystem=pybuild
dh_builddeb -O--buildsystem=pybuild
dpkg-deb: building package 'atropos' in '../atropos_1.1.32+dfsg-2_amd64.deb'.
dpkg-deb: building package 'atropos-dbgsym' in '../atropos-dbgsym_1.1.32+dfsg-2_amd64.deb'.
dpkg-genbuildinfo --build=binary -O../atropos_1.1.32+dfsg-2_amd64.buildinfo
dpkg-genchanges --build=binary -O../atropos_1.1.32+dfsg-2_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/1044162 and its subdirectories
I: Current time: Sat Feb 22 18:57:29 -12 2025
I: pbuilder-time-stamp: 1740293849
Sun Feb 23 06:57:30 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net.
Sun Feb 23 06:57:30 UTC 2025 I: Preparing to do remote build '2' on ionos5-amd64.debian.net.
Sun Feb 23 07:01:31 UTC 2025 I: Deleting $TMPDIR on ionos5-amd64.debian.net.
Sun Feb 23 07:01:32 UTC 2025 I: atropos_1.1.32+dfsg-2_amd64.changes:
Format: 1.8
Date: Wed, 31 Jul 2024 10:59:45 +0200
Source: atropos
Binary: atropos atropos-dbgsym
Architecture: amd64
Version: 1.1.32+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <crusoe@debian.org>
Description:
atropos - NGS read trimming tool that is specific, sensitive, and speedy
Changes:
atropos (1.1.32+dfsg-2) unstable; urgency=medium
.
* Team upload.
* Switch back to Cython3, it works.
Checksums-Sha1:
0fb5ef97a77e50ac4a03604a283c62472a165d1f 1290492 atropos-dbgsym_1.1.32+dfsg-2_amd64.deb
355420a6c9013121a710ccf2a2280748e26ef10c 7772 atropos_1.1.32+dfsg-2_amd64.buildinfo
aeaf8c54c151203cd06ac2f049f3238ea970f10e 264028 atropos_1.1.32+dfsg-2_amd64.deb
Checksums-Sha256:
59d7f82a77101eca6db06dd0a8c3eb459bb6a943b9ee0772e73d6c38f089ec2e 1290492 atropos-dbgsym_1.1.32+dfsg-2_amd64.deb
83b3c51440e45f68b205ea763e7978107e80d778b6554a21e3ff73ead350187d 7772 atropos_1.1.32+dfsg-2_amd64.buildinfo
bf16e4f9f593b60c21957f0a731c76ad160738c131e8041e24a9d53a753cc336 264028 atropos_1.1.32+dfsg-2_amd64.deb
Files:
afaf83fd5763790abc255ff1496f4552 1290492 debug optional atropos-dbgsym_1.1.32+dfsg-2_amd64.deb
9356c3d968e564850a2ba7c4ee46b7f5 7772 science optional atropos_1.1.32+dfsg-2_amd64.buildinfo
48eabd8ab545025e07126ebc4e1ac040 264028 science optional atropos_1.1.32+dfsg-2_amd64.deb
Sun Feb 23 07:01:33 UTC 2025 I: diffoscope 289 will be used to compare the two builds:
Running as unit: rb-diffoscope-amd64_5-31818.service
# Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.jt3nsgDx/atropos_1.1.32+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.jt3nsgDx/atropos_1.1.32+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.jt3nsgDx/atropos_1.1.32+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.jt3nsgDx/b1/atropos_1.1.32+dfsg-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.jt3nsgDx/b2/atropos_1.1.32+dfsg-2_amd64.changes
## command (total time: 0.000s)
0.000s 1 call cmp (internal)
## has_same_content_as (total time: 0.000s)
0.000s 1 call diffoscope.comparators.binary.FilesystemFile
## main (total time: 0.006s)
0.006s 2 calls outputs
0.000s 1 call cleanup
Finished with result: success
Main processes terminated with: code=exited/status=0
Service runtime: 419ms
CPU time consumed: 414ms
Sun Feb 23 07:01:34 UTC 2025 I: diffoscope 289 found no differences in the changes files, and a .buildinfo file also exists.
Sun Feb 23 07:01:34 UTC 2025 I: atropos from trixie built successfully and reproducibly on amd64.
Sun Feb 23 07:01:35 UTC 2025 I: Submitting .buildinfo files to external archives:
Sun Feb 23 07:01:35 UTC 2025 I: Submitting 12K b1/atropos_1.1.32+dfsg-2_amd64.buildinfo.asc
Sun Feb 23 07:01:36 UTC 2025 I: Submitting 12K b2/atropos_1.1.32+dfsg-2_amd64.buildinfo.asc
Sun Feb 23 07:01:37 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit.
Sun Feb 23 07:01:37 UTC 2025 I: Done submitting .buildinfo files.
Sun Feb 23 07:01:37 UTC 2025 I: Removing signed atropos_1.1.32+dfsg-2_amd64.buildinfo.asc files:
removed './b1/atropos_1.1.32+dfsg-2_amd64.buildinfo.asc'
removed './b2/atropos_1.1.32+dfsg-2_amd64.buildinfo.asc'